Multiple sequence alignment - TraesCS6D01G406100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G406100 chr6D 100.000 4283 0 0 1 4283 472807050 472802768 0.000000e+00 7910.0
1 TraesCS6D01G406100 chr6A 90.951 1315 45 20 2575 3839 616966421 616967711 0.000000e+00 1701.0
2 TraesCS6D01G406100 chr6A 90.714 140 3 2 4151 4283 616967958 616968094 1.220000e-40 178.0
3 TraesCS6D01G406100 chr6A 87.919 149 12 1 3927 4075 616967757 616967899 2.050000e-38 171.0
4 TraesCS6D01G406100 chr6A 90.000 110 7 4 2803 2912 616994742 616994847 5.780000e-29 139.0
5 TraesCS6D01G406100 chr6A 90.698 43 3 1 634 675 601670246 601670288 5.980000e-04 56.5
6 TraesCS6D01G406100 chr6B 83.729 1432 126 40 976 2394 717925209 717923872 0.000000e+00 1254.0
7 TraesCS6D01G406100 chr6B 84.718 903 80 27 93 961 717926146 717925268 0.000000e+00 850.0
8 TraesCS6D01G406100 chr6B 94.902 510 22 2 2413 2922 717922981 717922476 0.000000e+00 795.0
9 TraesCS6D01G406100 chr6B 86.019 515 56 15 2925 3432 717922227 717921722 4.870000e-149 538.0
10 TraesCS6D01G406100 chr6B 80.128 312 39 15 3948 4248 717920884 717920585 1.210000e-50 211.0
11 TraesCS6D01G406100 chr6B 97.590 83 2 0 3699 3781 717921237 717921155 4.460000e-30 143.0
12 TraesCS6D01G406100 chr6B 87.611 113 10 3 2803 2915 717913490 717913382 1.250000e-25 128.0
13 TraesCS6D01G406100 chr6B 75.620 242 36 13 497 715 568563647 568563888 9.800000e-17 99.0
14 TraesCS6D01G406100 chr6B 88.608 79 5 2 3707 3785 717920845 717920771 4.560000e-15 93.5
15 TraesCS6D01G406100 chr5B 94.595 37 1 1 640 675 700566322 700566358 5.980000e-04 56.5
16 TraesCS6D01G406100 chr3A 94.595 37 1 1 640 675 699628979 699629015 5.980000e-04 56.5
17 TraesCS6D01G406100 chr2B 94.595 37 1 1 640 675 571338017 571337981 5.980000e-04 56.5
18 TraesCS6D01G406100 chr2A 94.595 37 1 1 640 675 741830485 741830521 5.980000e-04 56.5
19 TraesCS6D01G406100 chr5A 100.000 29 0 0 646 674 473337521 473337493 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G406100 chr6D 472802768 472807050 4282 True 7910.000000 7910 100.000000 1 4283 1 chr6D.!!$R1 4282
1 TraesCS6D01G406100 chr6A 616966421 616968094 1673 False 683.333333 1701 89.861333 2575 4283 3 chr6A.!!$F3 1708
2 TraesCS6D01G406100 chr6B 717920585 717926146 5561 True 554.928571 1254 87.956286 93 4248 7 chr6B.!!$R2 4155

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
66 67 0.040067 CTTGCTTGTTGCTTCGTCCC 60.040 55.0 0.00 0.0 43.37 4.46 F
1517 1598 0.036388 TGTCATCAAGGAAGGCGGTC 60.036 55.0 0.00 0.0 0.00 4.79 F
1903 1989 0.036010 CTGACCAATGGACGCTTCCT 60.036 55.0 6.16 0.0 43.31 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1566 1647 0.040794 ACCCACCTTAGGAGTAGCGT 59.959 55.0 4.77 0.0 0.0 5.07 R
2918 4135 0.108585 AGCTCCACACCAAACGTGAT 59.891 50.0 0.00 0.0 46.2 3.06 R
3865 5460 0.035881 AGACATGCCATCGCCATAGG 59.964 55.0 0.00 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.513753 CTGCCAAATACAACACAGGGA 58.486 47.619 0.00 0.00 0.00 4.20
21 22 2.890311 CTGCCAAATACAACACAGGGAA 59.110 45.455 0.00 0.00 0.00 3.97
22 23 3.505386 TGCCAAATACAACACAGGGAAT 58.495 40.909 0.00 0.00 0.00 3.01
23 24 3.257873 TGCCAAATACAACACAGGGAATG 59.742 43.478 0.00 0.00 0.00 2.67
24 25 3.258123 GCCAAATACAACACAGGGAATGT 59.742 43.478 0.00 0.00 45.43 2.71
25 26 4.262420 GCCAAATACAACACAGGGAATGTT 60.262 41.667 0.00 0.00 41.41 2.71
29 30 2.340427 AACACAGGGAATGTTGCGG 58.660 52.632 0.00 0.00 41.41 5.69
30 31 0.179004 AACACAGGGAATGTTGCGGA 60.179 50.000 0.00 0.00 41.41 5.54
31 32 0.179004 ACACAGGGAATGTTGCGGAA 60.179 50.000 0.00 0.00 41.41 4.30
32 33 0.240945 CACAGGGAATGTTGCGGAAC 59.759 55.000 13.47 13.47 41.41 3.62
33 34 0.110486 ACAGGGAATGTTGCGGAACT 59.890 50.000 20.82 0.76 39.96 3.01
34 35 0.523072 CAGGGAATGTTGCGGAACTG 59.477 55.000 20.82 5.75 32.79 3.16
35 36 1.212751 GGGAATGTTGCGGAACTGC 59.787 57.895 20.82 6.68 32.79 4.40
36 37 1.212751 GGAATGTTGCGGAACTGCC 59.787 57.895 20.82 14.45 32.79 4.85
45 46 2.045926 GGAACTGCCGGCACATCT 60.046 61.111 29.03 10.06 0.00 2.90
46 47 1.220749 GGAACTGCCGGCACATCTA 59.779 57.895 29.03 2.56 0.00 1.98
47 48 1.090052 GGAACTGCCGGCACATCTAC 61.090 60.000 29.03 13.37 0.00 2.59
48 49 0.108138 GAACTGCCGGCACATCTACT 60.108 55.000 29.03 4.28 0.00 2.57
49 50 0.324943 AACTGCCGGCACATCTACTT 59.675 50.000 29.03 5.08 0.00 2.24
50 51 0.391661 ACTGCCGGCACATCTACTTG 60.392 55.000 29.03 15.43 0.00 3.16
51 52 1.709147 CTGCCGGCACATCTACTTGC 61.709 60.000 29.03 0.00 38.06 4.01
52 53 1.450312 GCCGGCACATCTACTTGCT 60.450 57.895 24.80 0.00 38.85 3.91
53 54 1.026718 GCCGGCACATCTACTTGCTT 61.027 55.000 24.80 0.00 38.85 3.91
54 55 0.729116 CCGGCACATCTACTTGCTTG 59.271 55.000 0.00 0.00 38.85 4.01
55 56 1.442769 CGGCACATCTACTTGCTTGT 58.557 50.000 0.00 0.00 38.85 3.16
56 57 1.806542 CGGCACATCTACTTGCTTGTT 59.193 47.619 0.00 0.00 38.85 2.83
57 58 2.413239 CGGCACATCTACTTGCTTGTTG 60.413 50.000 0.00 0.00 38.85 3.33
58 59 2.589014 GCACATCTACTTGCTTGTTGC 58.411 47.619 0.00 0.00 43.25 4.17
59 60 2.227388 GCACATCTACTTGCTTGTTGCT 59.773 45.455 0.00 0.00 43.37 3.91
60 61 3.304928 GCACATCTACTTGCTTGTTGCTT 60.305 43.478 0.00 0.00 43.37 3.91
61 62 4.470462 CACATCTACTTGCTTGTTGCTTC 58.530 43.478 0.00 0.00 43.37 3.86
62 63 3.187227 ACATCTACTTGCTTGTTGCTTCG 59.813 43.478 0.00 0.00 43.37 3.79
63 64 2.833794 TCTACTTGCTTGTTGCTTCGT 58.166 42.857 0.00 0.00 43.37 3.85
64 65 2.800544 TCTACTTGCTTGTTGCTTCGTC 59.199 45.455 0.00 0.00 43.37 4.20
65 66 0.663153 ACTTGCTTGTTGCTTCGTCC 59.337 50.000 0.00 0.00 43.37 4.79
66 67 0.040067 CTTGCTTGTTGCTTCGTCCC 60.040 55.000 0.00 0.00 43.37 4.46
67 68 1.781025 TTGCTTGTTGCTTCGTCCCG 61.781 55.000 0.00 0.00 43.37 5.14
68 69 2.251642 GCTTGTTGCTTCGTCCCGT 61.252 57.895 0.00 0.00 38.95 5.28
69 70 1.860078 CTTGTTGCTTCGTCCCGTC 59.140 57.895 0.00 0.00 0.00 4.79
70 71 1.566018 CTTGTTGCTTCGTCCCGTCC 61.566 60.000 0.00 0.00 0.00 4.79
71 72 2.029964 GTTGCTTCGTCCCGTCCA 59.970 61.111 0.00 0.00 0.00 4.02
72 73 2.029964 TTGCTTCGTCCCGTCCAC 59.970 61.111 0.00 0.00 0.00 4.02
73 74 2.798364 TTGCTTCGTCCCGTCCACA 61.798 57.895 0.00 0.00 0.00 4.17
74 75 2.432628 GCTTCGTCCCGTCCACAG 60.433 66.667 0.00 0.00 0.00 3.66
75 76 2.432628 CTTCGTCCCGTCCACAGC 60.433 66.667 0.00 0.00 0.00 4.40
76 77 3.934391 CTTCGTCCCGTCCACAGCC 62.934 68.421 0.00 0.00 0.00 4.85
104 105 1.937391 CCAAATGGCTCGCGAGATC 59.063 57.895 38.74 27.52 40.84 2.75
146 147 2.281345 CCATGCCAGATCTCCGCC 60.281 66.667 8.49 0.00 0.00 6.13
149 150 3.157217 ATGCCAGATCTCCGCCGTC 62.157 63.158 8.49 0.00 0.00 4.79
162 163 4.891727 CCGTCGAATGCCTCCCCG 62.892 72.222 0.00 0.00 0.00 5.73
230 231 0.968901 TAGCGAGATCACCCACCGTT 60.969 55.000 0.00 0.00 0.00 4.44
240 241 4.452733 CCACCGTTCGCCTCCTCC 62.453 72.222 0.00 0.00 0.00 4.30
251 252 2.450320 CCTCCTCCCCTCCATGCTG 61.450 68.421 0.00 0.00 0.00 4.41
264 265 2.714793 TCCATGCTGGATCTCCATGATT 59.285 45.455 16.79 0.00 42.67 2.57
294 295 1.802337 CTGTTGACCAGACCGACGGA 61.802 60.000 23.38 0.00 44.49 4.69
321 322 3.112709 GAGTGTCGCCAACCTCGC 61.113 66.667 0.00 0.00 0.00 5.03
326 327 2.745884 TCGCCAACCTCGCCATTG 60.746 61.111 0.00 0.00 0.00 2.82
328 329 2.676471 GCCAACCTCGCCATTGGT 60.676 61.111 4.26 0.00 46.07 3.67
371 372 2.202557 CCATCGTGCGCGTACTCA 60.203 61.111 24.56 11.75 39.49 3.41
389 390 0.533755 CACTTCCATGCCGGATCTCC 60.534 60.000 5.05 0.00 45.80 3.71
407 408 1.146263 CGCCATTGAGTACCTCCCC 59.854 63.158 0.00 0.00 0.00 4.81
446 447 4.785453 GGGGAGGAGCGTTGCCAG 62.785 72.222 0.00 0.00 0.00 4.85
471 472 0.534412 CCATCGTCCTCTCAGCAGTT 59.466 55.000 0.00 0.00 0.00 3.16
522 523 2.825532 GCTTAATGGTGGTGGTGAACAT 59.174 45.455 0.00 0.00 0.00 2.71
611 636 6.147864 ACAGAATAGAGAGCAGAGATGTTC 57.852 41.667 0.00 0.00 0.00 3.18
612 637 5.068987 ACAGAATAGAGAGCAGAGATGTTCC 59.931 44.000 0.00 0.00 0.00 3.62
613 638 5.068855 CAGAATAGAGAGCAGAGATGTTCCA 59.931 44.000 0.00 0.00 0.00 3.53
614 639 5.660417 AGAATAGAGAGCAGAGATGTTCCAA 59.340 40.000 0.00 0.00 0.00 3.53
628 656 6.114767 AGATGTTCCAAATTTGCAACAAAGT 58.885 32.000 26.80 14.02 32.66 2.66
632 660 7.080724 TGTTCCAAATTTGCAACAAAGTTTTC 58.919 30.769 22.35 0.00 0.00 2.29
650 678 4.902443 TTTCGTTGTAGGAATGTTGCAA 57.098 36.364 0.00 0.00 0.00 4.08
730 763 1.067084 AGACAGCTCGCATCATCGG 59.933 57.895 0.00 0.00 0.00 4.18
737 770 1.734047 GCTCGCATCATCGGATAGGAC 60.734 57.143 0.00 0.00 30.87 3.85
749 782 3.447025 ATAGGACGGCTCGCAAGGC 62.447 63.158 0.00 0.00 44.42 4.35
770 803 3.053896 GGGGCCAACGTGTAGCAC 61.054 66.667 4.39 3.05 0.00 4.40
797 830 6.070881 CCCCTTGTCAAATCCACAATTTATGA 60.071 38.462 0.00 0.00 35.77 2.15
798 831 7.385267 CCCTTGTCAAATCCACAATTTATGAA 58.615 34.615 0.00 0.00 35.77 2.57
799 832 7.546667 CCCTTGTCAAATCCACAATTTATGAAG 59.453 37.037 0.00 0.00 35.77 3.02
800 833 8.306038 CCTTGTCAAATCCACAATTTATGAAGA 58.694 33.333 0.00 0.00 35.77 2.87
841 874 5.873179 TTTTGTACGATGGAATCCTTGAC 57.127 39.130 0.00 0.00 41.39 3.18
842 875 4.545208 TTGTACGATGGAATCCTTGACA 57.455 40.909 0.00 0.00 41.39 3.58
843 876 4.545208 TGTACGATGGAATCCTTGACAA 57.455 40.909 0.00 0.00 41.39 3.18
844 877 4.503910 TGTACGATGGAATCCTTGACAAG 58.496 43.478 8.31 8.31 41.39 3.16
845 878 2.359900 ACGATGGAATCCTTGACAAGC 58.640 47.619 9.85 0.00 41.39 4.01
846 879 2.026822 ACGATGGAATCCTTGACAAGCT 60.027 45.455 9.85 0.00 41.39 3.74
847 880 2.353889 CGATGGAATCCTTGACAAGCTG 59.646 50.000 9.85 0.00 41.39 4.24
850 883 4.866068 GATGGAATCCTTGACAAGCTGTCT 60.866 45.833 9.85 0.00 41.91 3.41
852 885 7.076417 GATGGAATCCTTGACAAGCTGTCTTA 61.076 42.308 9.85 1.45 41.91 2.10
862 895 4.489810 ACAAGCTGTCTTATGTTCTCTCG 58.510 43.478 0.00 0.00 0.00 4.04
864 897 4.792521 AGCTGTCTTATGTTCTCTCGTT 57.207 40.909 0.00 0.00 0.00 3.85
865 898 4.739195 AGCTGTCTTATGTTCTCTCGTTC 58.261 43.478 0.00 0.00 0.00 3.95
867 900 4.724303 CTGTCTTATGTTCTCTCGTTCGT 58.276 43.478 0.00 0.00 0.00 3.85
868 901 5.117355 TGTCTTATGTTCTCTCGTTCGTT 57.883 39.130 0.00 0.00 0.00 3.85
869 902 4.915667 TGTCTTATGTTCTCTCGTTCGTTG 59.084 41.667 0.00 0.00 0.00 4.10
870 903 3.918591 TCTTATGTTCTCTCGTTCGTTGC 59.081 43.478 0.00 0.00 0.00 4.17
875 908 0.319555 TCTCTCGTTCGTTGCCTTGG 60.320 55.000 0.00 0.00 0.00 3.61
877 910 0.319555 TCTCGTTCGTTGCCTTGGAG 60.320 55.000 0.00 0.00 0.00 3.86
879 912 0.179067 TCGTTCGTTGCCTTGGAGTT 60.179 50.000 0.00 0.00 0.00 3.01
880 913 0.661020 CGTTCGTTGCCTTGGAGTTT 59.339 50.000 0.00 0.00 0.00 2.66
881 914 1.064952 CGTTCGTTGCCTTGGAGTTTT 59.935 47.619 0.00 0.00 0.00 2.43
882 915 2.459934 GTTCGTTGCCTTGGAGTTTTG 58.540 47.619 0.00 0.00 0.00 2.44
883 916 2.045561 TCGTTGCCTTGGAGTTTTGA 57.954 45.000 0.00 0.00 0.00 2.69
884 917 1.946768 TCGTTGCCTTGGAGTTTTGAG 59.053 47.619 0.00 0.00 0.00 3.02
885 918 1.946768 CGTTGCCTTGGAGTTTTGAGA 59.053 47.619 0.00 0.00 0.00 3.27
886 919 2.357637 CGTTGCCTTGGAGTTTTGAGAA 59.642 45.455 0.00 0.00 0.00 2.87
887 920 3.181491 CGTTGCCTTGGAGTTTTGAGAAA 60.181 43.478 0.00 0.00 0.00 2.52
888 921 4.676723 CGTTGCCTTGGAGTTTTGAGAAAA 60.677 41.667 0.00 0.00 0.00 2.29
889 922 5.359756 GTTGCCTTGGAGTTTTGAGAAAAT 58.640 37.500 0.00 0.00 32.22 1.82
890 923 5.200368 TGCCTTGGAGTTTTGAGAAAATC 57.800 39.130 0.00 0.00 38.71 2.17
891 924 4.895297 TGCCTTGGAGTTTTGAGAAAATCT 59.105 37.500 0.00 0.00 39.23 2.40
892 925 6.068010 TGCCTTGGAGTTTTGAGAAAATCTA 58.932 36.000 0.00 0.00 39.23 1.98
893 926 6.721208 TGCCTTGGAGTTTTGAGAAAATCTAT 59.279 34.615 0.00 0.00 39.23 1.98
894 927 7.233348 TGCCTTGGAGTTTTGAGAAAATCTATT 59.767 33.333 0.00 0.00 39.23 1.73
895 928 8.739972 GCCTTGGAGTTTTGAGAAAATCTATTA 58.260 33.333 0.00 0.00 39.23 0.98
946 979 2.027837 TCCCTGCGAGTTAAAACCCTAC 60.028 50.000 0.00 0.00 0.00 3.18
954 987 6.183360 TGCGAGTTAAAACCCTACCTAGATAC 60.183 42.308 0.00 0.00 0.00 2.24
956 989 7.199078 CGAGTTAAAACCCTACCTAGATACAC 58.801 42.308 0.00 0.00 0.00 2.90
961 994 2.692041 ACCCTACCTAGATACACAACGC 59.308 50.000 0.00 0.00 0.00 4.84
963 996 3.243434 CCCTACCTAGATACACAACGCTG 60.243 52.174 0.00 0.00 0.00 5.18
964 997 2.295253 ACCTAGATACACAACGCTGC 57.705 50.000 0.00 0.00 0.00 5.25
965 998 1.134788 ACCTAGATACACAACGCTGCC 60.135 52.381 0.00 0.00 0.00 4.85
967 1000 2.464865 CTAGATACACAACGCTGCCTC 58.535 52.381 0.00 0.00 0.00 4.70
968 1001 0.898320 AGATACACAACGCTGCCTCT 59.102 50.000 0.00 0.00 0.00 3.69
969 1002 1.134965 AGATACACAACGCTGCCTCTC 60.135 52.381 0.00 0.00 0.00 3.20
970 1003 0.458543 ATACACAACGCTGCCTCTCG 60.459 55.000 0.00 0.00 0.00 4.04
972 1005 2.049063 ACAACGCTGCCTCTCGAC 60.049 61.111 0.00 0.00 0.00 4.20
973 1006 3.175240 CAACGCTGCCTCTCGACG 61.175 66.667 0.00 0.00 0.00 5.12
990 1067 1.994074 GACGCTCGATCGATAGCTAGA 59.006 52.381 19.78 0.00 36.56 2.43
1006 1083 0.817654 TAGATAGCGATCCATGGCCG 59.182 55.000 18.22 18.22 31.81 6.13
1013 1090 1.498865 CGATCCATGGCCGCAGTAAC 61.499 60.000 6.96 0.00 0.00 2.50
1020 1097 4.752879 GCCGCAGTAACGAGGCCA 62.753 66.667 5.01 0.00 45.24 5.36
1026 1103 1.016130 CAGTAACGAGGCCACAGCTG 61.016 60.000 13.48 13.48 39.73 4.24
1074 1151 4.778415 CTCACCGCCGTCGACCTG 62.778 72.222 10.58 2.39 38.10 4.00
1097 1174 3.147595 CATCACTCTCCCCGCCGA 61.148 66.667 0.00 0.00 0.00 5.54
1127 1204 2.092914 ACTTTCCCTGCAGGTATAGCAC 60.093 50.000 30.63 0.00 37.02 4.40
1130 1207 1.694150 TCCCTGCAGGTATAGCACATC 59.306 52.381 30.63 0.00 37.02 3.06
1131 1208 1.606480 CCCTGCAGGTATAGCACATCG 60.606 57.143 30.63 7.41 37.02 3.84
1132 1209 1.341209 CCTGCAGGTATAGCACATCGA 59.659 52.381 25.53 0.00 37.02 3.59
1134 1211 3.249091 CTGCAGGTATAGCACATCGATC 58.751 50.000 5.57 0.00 37.02 3.69
1136 1213 2.232452 GCAGGTATAGCACATCGATCCT 59.768 50.000 4.48 0.00 0.00 3.24
1137 1214 3.674682 GCAGGTATAGCACATCGATCCTC 60.675 52.174 4.48 0.00 0.00 3.71
1138 1215 3.761218 CAGGTATAGCACATCGATCCTCT 59.239 47.826 4.48 0.00 0.00 3.69
1139 1216 4.013728 AGGTATAGCACATCGATCCTCTC 58.986 47.826 4.48 0.00 0.00 3.20
1140 1217 3.129638 GGTATAGCACATCGATCCTCTCC 59.870 52.174 0.00 0.00 0.00 3.71
1141 1218 2.666272 TAGCACATCGATCCTCTCCT 57.334 50.000 0.00 0.00 0.00 3.69
1142 1219 1.327303 AGCACATCGATCCTCTCCTC 58.673 55.000 0.00 0.00 0.00 3.71
1143 1220 1.133513 AGCACATCGATCCTCTCCTCT 60.134 52.381 0.00 0.00 0.00 3.69
1144 1221 1.686052 GCACATCGATCCTCTCCTCTT 59.314 52.381 0.00 0.00 0.00 2.85
1145 1222 2.288152 GCACATCGATCCTCTCCTCTTC 60.288 54.545 0.00 0.00 0.00 2.87
1146 1223 2.031245 CACATCGATCCTCTCCTCTTCG 60.031 54.545 0.00 0.00 0.00 3.79
1147 1224 2.158740 ACATCGATCCTCTCCTCTTCGA 60.159 50.000 0.00 0.00 42.29 3.71
1148 1225 1.956297 TCGATCCTCTCCTCTTCGAC 58.044 55.000 0.00 0.00 34.24 4.20
1149 1226 0.948678 CGATCCTCTCCTCTTCGACC 59.051 60.000 0.00 0.00 31.74 4.79
1150 1227 1.476110 CGATCCTCTCCTCTTCGACCT 60.476 57.143 0.00 0.00 31.74 3.85
1151 1228 2.224329 CGATCCTCTCCTCTTCGACCTA 60.224 54.545 0.00 0.00 31.74 3.08
1152 1229 3.744846 CGATCCTCTCCTCTTCGACCTAA 60.745 52.174 0.00 0.00 31.74 2.69
1153 1230 3.955524 TCCTCTCCTCTTCGACCTAAT 57.044 47.619 0.00 0.00 0.00 1.73
1154 1231 4.252570 TCCTCTCCTCTTCGACCTAATT 57.747 45.455 0.00 0.00 0.00 1.40
1155 1232 4.208746 TCCTCTCCTCTTCGACCTAATTC 58.791 47.826 0.00 0.00 0.00 2.17
1156 1233 3.319689 CCTCTCCTCTTCGACCTAATTCC 59.680 52.174 0.00 0.00 0.00 3.01
1157 1234 4.211920 CTCTCCTCTTCGACCTAATTCCT 58.788 47.826 0.00 0.00 0.00 3.36
1158 1235 4.611367 TCTCCTCTTCGACCTAATTCCTT 58.389 43.478 0.00 0.00 0.00 3.36
1159 1236 4.645588 TCTCCTCTTCGACCTAATTCCTTC 59.354 45.833 0.00 0.00 0.00 3.46
1160 1237 3.705072 TCCTCTTCGACCTAATTCCTTCC 59.295 47.826 0.00 0.00 0.00 3.46
1163 1240 4.350245 TCTTCGACCTAATTCCTTCCTCA 58.650 43.478 0.00 0.00 0.00 3.86
1173 1250 2.159179 TCCTTCCTCATGATCGACCA 57.841 50.000 0.00 0.00 0.00 4.02
1186 1263 3.189702 TGATCGACCAATATGCATGCATG 59.810 43.478 37.43 24.93 37.82 4.06
1211 1288 4.614036 CAACCCACGGCCCCCTTT 62.614 66.667 0.00 0.00 0.00 3.11
1226 1303 3.641436 CCCCCTTTTATATCTTGCCCAAC 59.359 47.826 0.00 0.00 0.00 3.77
1234 1311 2.981859 ATCTTGCCCAACTAGGTACG 57.018 50.000 0.00 0.00 34.66 3.67
1255 1332 3.119316 CGTGCAAGCAATTTACCCCATAA 60.119 43.478 0.00 0.00 0.00 1.90
1262 1343 5.090845 AGCAATTTACCCCATAACTTTGGT 58.909 37.500 0.00 0.00 34.77 3.67
1264 1345 5.872617 GCAATTTACCCCATAACTTTGGTTC 59.127 40.000 0.00 0.00 36.92 3.62
1299 1380 8.615705 TCTCTATATATGTGACTACTGGTGGAT 58.384 37.037 0.00 0.00 0.00 3.41
1319 1400 5.063204 GGATTACCTGTAATATGTGCAGCA 58.937 41.667 2.65 0.00 38.56 4.41
1333 1414 2.289820 GTGCAGCAACGATGATGATGAT 59.710 45.455 15.55 0.00 45.81 2.45
1336 1417 3.188667 GCAGCAACGATGATGATGATGAT 59.811 43.478 15.55 0.00 45.81 2.45
1337 1418 4.712763 CAGCAACGATGATGATGATGATG 58.287 43.478 4.78 0.00 45.81 3.07
1338 1419 4.451096 CAGCAACGATGATGATGATGATGA 59.549 41.667 4.78 0.00 45.81 2.92
1339 1420 5.122396 CAGCAACGATGATGATGATGATGAT 59.878 40.000 4.78 0.00 45.81 2.45
1340 1421 5.122396 AGCAACGATGATGATGATGATGATG 59.878 40.000 0.00 0.00 0.00 3.07
1341 1422 5.121768 GCAACGATGATGATGATGATGATGA 59.878 40.000 0.00 0.00 0.00 2.92
1342 1423 6.183360 GCAACGATGATGATGATGATGATGAT 60.183 38.462 0.00 0.00 0.00 2.45
1343 1424 6.910536 ACGATGATGATGATGATGATGATG 57.089 37.500 0.00 0.00 0.00 3.07
1344 1425 6.640518 ACGATGATGATGATGATGATGATGA 58.359 36.000 0.00 0.00 0.00 2.92
1345 1426 7.275920 ACGATGATGATGATGATGATGATGAT 58.724 34.615 0.00 0.00 0.00 2.45
1346 1427 7.225538 ACGATGATGATGATGATGATGATGATG 59.774 37.037 0.00 0.00 0.00 3.07
1347 1428 7.439356 CGATGATGATGATGATGATGATGATGA 59.561 37.037 0.00 0.00 0.00 2.92
1366 1447 2.755655 TGAGGTACTGCTACTTGAGAGC 59.244 50.000 0.00 0.00 41.55 4.09
1369 1450 2.359531 GGTACTGCTACTTGAGAGCGAT 59.640 50.000 0.00 0.00 43.19 4.58
1375 1456 1.929836 CTACTTGAGAGCGATGTTGGC 59.070 52.381 0.00 0.00 0.00 4.52
1377 1458 1.372087 CTTGAGAGCGATGTTGGCCC 61.372 60.000 0.00 0.00 0.00 5.80
1384 1465 2.190578 GATGTTGGCCCTCCTCCG 59.809 66.667 0.00 0.00 0.00 4.63
1396 1477 2.438614 CCTCCGGAGCTCGAGACA 60.439 66.667 26.87 0.00 42.43 3.41
1404 1485 0.456995 GAGCTCGAGACAGGTTTCGG 60.457 60.000 18.75 4.95 37.72 4.30
1430 1511 3.542875 CGTGATCATTGTCGACAATCTGC 60.543 47.826 34.94 25.98 44.10 4.26
1438 1519 2.884012 TGTCGACAATCTGCCAATTGTT 59.116 40.909 17.62 0.00 46.99 2.83
1441 1522 2.728846 CGACAATCTGCCAATTGTTCCG 60.729 50.000 13.23 10.13 46.99 4.30
1443 1524 0.532115 AATCTGCCAATTGTTCCGGC 59.468 50.000 4.43 0.36 46.43 6.13
1463 1544 1.294857 GGAGAAATTCGAGAGGCTGC 58.705 55.000 0.00 0.00 0.00 5.25
1466 1547 1.277557 AGAAATTCGAGAGGCTGCAGT 59.722 47.619 16.64 0.00 0.00 4.40
1487 1568 0.582960 TGTCATGCGCGCAATCTATG 59.417 50.000 39.68 29.90 0.00 2.23
1513 1594 1.909700 TTGGTGTCATCAAGGAAGGC 58.090 50.000 0.00 0.00 0.00 4.35
1517 1598 0.036388 TGTCATCAAGGAAGGCGGTC 60.036 55.000 0.00 0.00 0.00 4.79
1519 1600 1.480954 GTCATCAAGGAAGGCGGTCTA 59.519 52.381 0.00 0.00 0.00 2.59
1561 1642 1.409427 ACCTACGGCTACTGCTTCATC 59.591 52.381 0.00 0.00 39.59 2.92
1564 1645 0.530744 ACGGCTACTGCTTCATCGAA 59.469 50.000 0.00 0.00 39.59 3.71
1566 1647 2.361119 ACGGCTACTGCTTCATCGAATA 59.639 45.455 0.00 0.00 39.59 1.75
1577 1658 4.083431 GCTTCATCGAATACGCTACTCCTA 60.083 45.833 0.00 0.00 39.58 2.94
1579 1660 5.608676 TCATCGAATACGCTACTCCTAAG 57.391 43.478 0.00 0.00 39.58 2.18
1598 1679 6.069847 TCCTAAGGTGGGTATTTTAGTTCCTG 60.070 42.308 0.00 0.00 0.00 3.86
1602 1683 6.800890 AGGTGGGTATTTTAGTTCCTGATTT 58.199 36.000 0.00 0.00 0.00 2.17
1603 1684 7.935405 AGGTGGGTATTTTAGTTCCTGATTTA 58.065 34.615 0.00 0.00 0.00 1.40
1604 1685 8.566109 AGGTGGGTATTTTAGTTCCTGATTTAT 58.434 33.333 0.00 0.00 0.00 1.40
1605 1686 8.847196 GGTGGGTATTTTAGTTCCTGATTTATC 58.153 37.037 0.00 0.00 0.00 1.75
1606 1687 9.628500 GTGGGTATTTTAGTTCCTGATTTATCT 57.372 33.333 0.00 0.00 0.00 1.98
1613 1694 8.857694 TTTAGTTCCTGATTTATCTTTTCCGT 57.142 30.769 0.00 0.00 0.00 4.69
1614 1695 8.857694 TTAGTTCCTGATTTATCTTTTCCGTT 57.142 30.769 0.00 0.00 0.00 4.44
1615 1696 7.761038 AGTTCCTGATTTATCTTTTCCGTTT 57.239 32.000 0.00 0.00 0.00 3.60
1664 1749 7.014518 TGCTTTGCATGCTTTATATATTCACCT 59.985 33.333 20.33 0.00 31.71 4.00
1665 1750 7.869429 GCTTTGCATGCTTTATATATTCACCTT 59.131 33.333 20.33 0.00 0.00 3.50
1668 1753 8.916628 TGCATGCTTTATATATTCACCTTACA 57.083 30.769 20.33 0.00 0.00 2.41
1681 1766 6.870971 TTCACCTTACATTACTGACCAAAC 57.129 37.500 0.00 0.00 0.00 2.93
1682 1767 5.310451 TCACCTTACATTACTGACCAAACC 58.690 41.667 0.00 0.00 0.00 3.27
1683 1768 5.072600 TCACCTTACATTACTGACCAAACCT 59.927 40.000 0.00 0.00 0.00 3.50
1687 1773 7.013942 ACCTTACATTACTGACCAAACCTTTTC 59.986 37.037 0.00 0.00 0.00 2.29
1688 1774 7.013846 CCTTACATTACTGACCAAACCTTTTCA 59.986 37.037 0.00 0.00 0.00 2.69
1690 1776 6.569780 ACATTACTGACCAAACCTTTTCAAC 58.430 36.000 0.00 0.00 0.00 3.18
1693 1779 5.738619 ACTGACCAAACCTTTTCAACTTT 57.261 34.783 0.00 0.00 0.00 2.66
1700 1786 5.491973 CAAACCTTTTCAACTTTCATTGCG 58.508 37.500 0.00 0.00 0.00 4.85
1707 1793 4.630894 TCAACTTTCATTGCGTTGAGTT 57.369 36.364 10.10 0.00 41.27 3.01
1708 1794 5.743026 TCAACTTTCATTGCGTTGAGTTA 57.257 34.783 10.10 0.00 41.27 2.24
1711 1797 7.295201 TCAACTTTCATTGCGTTGAGTTATAC 58.705 34.615 10.10 0.00 41.27 1.47
1713 1799 5.636121 ACTTTCATTGCGTTGAGTTATACGA 59.364 36.000 0.00 0.00 40.03 3.43
1714 1800 5.444586 TTCATTGCGTTGAGTTATACGAC 57.555 39.130 0.00 0.00 40.03 4.34
1727 1813 7.650890 TGAGTTATACGACGAATTAGCCATAA 58.349 34.615 0.00 0.00 0.00 1.90
1739 1825 5.560966 ATTAGCCATAAACTTGTTGGACG 57.439 39.130 0.00 0.00 31.94 4.79
1741 1827 3.686016 AGCCATAAACTTGTTGGACGAT 58.314 40.909 0.00 0.00 31.94 3.73
1749 1835 6.391227 AAACTTGTTGGACGATTGAAAGAT 57.609 33.333 0.00 0.00 0.00 2.40
1751 1837 7.687941 AACTTGTTGGACGATTGAAAGATAT 57.312 32.000 0.00 0.00 0.00 1.63
1752 1838 8.786826 AACTTGTTGGACGATTGAAAGATATA 57.213 30.769 0.00 0.00 0.00 0.86
1753 1839 8.964476 ACTTGTTGGACGATTGAAAGATATAT 57.036 30.769 0.00 0.00 0.00 0.86
1786 1872 1.466856 GATGAATGTGCCAGGAAGCA 58.533 50.000 0.00 0.00 41.46 3.91
1806 1892 0.726118 GAGCTTGCGAGGCGAAAAAC 60.726 55.000 2.37 0.00 34.52 2.43
1813 1899 0.666374 CGAGGCGAAAAACCAACCTT 59.334 50.000 0.00 0.00 0.00 3.50
1816 1902 3.057806 CGAGGCGAAAAACCAACCTTTAT 60.058 43.478 0.00 0.00 0.00 1.40
1819 1905 2.407026 GCGAAAAACCAACCTTTATGCG 59.593 45.455 0.00 0.00 0.00 4.73
1820 1906 2.407026 CGAAAAACCAACCTTTATGCGC 59.593 45.455 0.00 0.00 0.00 6.09
1830 1916 1.453155 CTTTATGCGCTGGACAGGTT 58.547 50.000 9.73 0.00 0.00 3.50
1831 1917 1.812571 CTTTATGCGCTGGACAGGTTT 59.187 47.619 9.73 0.00 0.00 3.27
1836 1922 1.444119 GCGCTGGACAGGTTTCACAA 61.444 55.000 0.00 0.00 0.00 3.33
1837 1923 0.588252 CGCTGGACAGGTTTCACAAG 59.412 55.000 1.01 0.00 0.00 3.16
1840 1926 2.033424 GCTGGACAGGTTTCACAAGTTC 59.967 50.000 1.01 0.00 0.00 3.01
1843 1929 2.618709 GGACAGGTTTCACAAGTTCCAG 59.381 50.000 0.00 0.00 0.00 3.86
1846 1932 3.023832 CAGGTTTCACAAGTTCCAGGTT 58.976 45.455 0.00 0.00 0.00 3.50
1849 1935 4.643334 AGGTTTCACAAGTTCCAGGTTAAC 59.357 41.667 0.00 0.00 0.00 2.01
1855 1941 5.298276 TCACAAGTTCCAGGTTAACATGTTC 59.702 40.000 15.85 1.02 36.83 3.18
1858 1944 4.906618 AGTTCCAGGTTAACATGTTCGAT 58.093 39.130 15.85 0.00 0.00 3.59
1864 1950 5.181245 CCAGGTTAACATGTTCGATGACTTT 59.819 40.000 15.85 0.00 0.00 2.66
1876 1962 6.145534 TGTTCGATGACTTTGACAAGTACATC 59.854 38.462 14.70 14.70 43.79 3.06
1877 1963 5.778862 TCGATGACTTTGACAAGTACATCA 58.221 37.500 19.95 9.62 43.79 3.07
1888 1974 4.642429 ACAAGTACATCAAAGTCCCTGAC 58.358 43.478 0.00 0.00 0.00 3.51
1889 1975 3.983044 AGTACATCAAAGTCCCTGACC 57.017 47.619 0.00 0.00 32.18 4.02
1899 1985 1.918293 TCCCTGACCAATGGACGCT 60.918 57.895 6.16 0.00 0.00 5.07
1903 1989 0.036010 CTGACCAATGGACGCTTCCT 60.036 55.000 6.16 0.00 43.31 3.36
1904 1990 0.321564 TGACCAATGGACGCTTCCTG 60.322 55.000 6.16 1.12 43.31 3.86
1905 1991 0.036388 GACCAATGGACGCTTCCTGA 60.036 55.000 6.16 0.00 43.31 3.86
1912 1998 2.632377 TGGACGCTTCCTGATGAAATC 58.368 47.619 11.01 0.00 43.31 2.17
1929 2015 3.855689 AATCAAGCAATACACACCTGC 57.144 42.857 0.00 0.00 36.29 4.85
1993 2079 4.891168 AGATATGTTTCTGATGCATTGCCA 59.109 37.500 6.12 0.00 0.00 4.92
1994 2080 3.965379 ATGTTTCTGATGCATTGCCAA 57.035 38.095 6.12 0.00 0.00 4.52
1996 2082 2.288948 TGTTTCTGATGCATTGCCAACC 60.289 45.455 6.12 0.00 0.00 3.77
1999 2085 2.181125 TCTGATGCATTGCCAACCAAT 58.819 42.857 6.12 0.00 44.86 3.16
2005 2091 3.678915 GCATTGCCAACCAATTAATGC 57.321 42.857 0.00 0.00 42.15 3.56
2006 2092 3.272581 GCATTGCCAACCAATTAATGCT 58.727 40.909 11.00 0.00 46.03 3.79
2008 2094 4.437659 GCATTGCCAACCAATTAATGCTTG 60.438 41.667 11.00 0.00 46.03 4.01
2009 2095 3.331478 TGCCAACCAATTAATGCTTGG 57.669 42.857 11.98 11.98 44.46 3.61
2011 2097 2.270047 CCAACCAATTAATGCTTGGCG 58.730 47.619 6.28 0.00 45.83 5.69
2012 2098 2.353605 CCAACCAATTAATGCTTGGCGT 60.354 45.455 6.28 0.00 45.83 5.68
2013 2099 3.324993 CAACCAATTAATGCTTGGCGTT 58.675 40.909 6.28 2.58 45.83 4.84
2015 2101 4.792521 ACCAATTAATGCTTGGCGTTTA 57.207 36.364 6.28 0.00 45.83 2.01
2017 2103 5.729510 ACCAATTAATGCTTGGCGTTTAAT 58.270 33.333 6.28 4.06 45.83 1.40
2018 2104 5.580297 ACCAATTAATGCTTGGCGTTTAATG 59.420 36.000 6.28 0.00 45.83 1.90
2020 2106 6.455380 CCAATTAATGCTTGGCGTTTAATGTG 60.455 38.462 2.30 7.24 38.76 3.21
2036 2124 4.701956 AATGTGTGTATTGCAGCCTAAC 57.298 40.909 0.00 0.00 0.00 2.34
2042 2130 2.487762 TGTATTGCAGCCTAACTTGCAC 59.512 45.455 0.00 0.00 33.85 4.57
2044 2132 1.397672 TTGCAGCCTAACTTGCACAA 58.602 45.000 0.00 0.00 33.85 3.33
2059 2147 1.406539 GCACAAGTGGCTAATGGATGG 59.593 52.381 2.00 0.00 0.00 3.51
2066 2154 0.890996 GGCTAATGGATGGGAAGGCG 60.891 60.000 0.00 0.00 0.00 5.52
2089 2177 1.416401 AGACCAGTTTGTCATCCGTGT 59.584 47.619 0.00 0.00 37.73 4.49
2117 2205 3.022406 GTCTACCGAGGTGTACTGGAAT 58.978 50.000 4.80 0.00 0.00 3.01
2153 2241 2.107552 ACTTGCCTACCAAAAGCAGGTA 59.892 45.455 0.00 0.00 43.95 3.08
2157 2245 3.328343 TGCCTACCAAAAGCAGGTACTTA 59.672 43.478 0.00 0.00 40.54 2.24
2183 2271 4.488126 TCTTTTCGGACTTCTTGCATTG 57.512 40.909 0.00 0.00 0.00 2.82
2186 2274 3.896648 TTCGGACTTCTTGCATTGTTC 57.103 42.857 0.00 0.00 0.00 3.18
2196 2284 6.040842 ACTTCTTGCATTGTTCCATACAGTTT 59.959 34.615 0.00 0.00 38.19 2.66
2247 2335 4.575885 TGCCACACTTCCATAAGTAGAAC 58.424 43.478 0.00 0.00 44.28 3.01
2251 2339 6.351117 GCCACACTTCCATAAGTAGAACTAGT 60.351 42.308 0.00 0.00 44.28 2.57
2252 2340 7.147949 GCCACACTTCCATAAGTAGAACTAGTA 60.148 40.741 0.00 0.00 44.28 1.82
2320 2408 3.485216 GCGATGGACCGATAGTTTTGTTG 60.485 47.826 0.00 0.00 0.00 3.33
2339 2427 2.526432 TGAGTGGTCTCCTCTTGGTAC 58.474 52.381 0.00 0.00 39.75 3.34
2516 3479 4.576463 AGGAGAACTTGTTGCACTAGTTTG 59.424 41.667 13.75 0.00 42.52 2.93
2531 3494 3.064900 AGTTTGGAGCTGTTCAGGATC 57.935 47.619 0.00 0.00 0.00 3.36
2573 3536 3.507622 GGGAGGTCTTTGAATTGGACAAG 59.492 47.826 0.00 0.00 0.00 3.16
2772 3735 0.544697 TCCTGCGGGGAAGTTTATCC 59.455 55.000 12.87 0.00 41.91 2.59
2786 3749 2.685388 GTTTATCCTTCTTGCTGGGCTC 59.315 50.000 0.00 0.00 0.00 4.70
2795 3758 1.114722 TTGCTGGGCTCAAGGGTTTG 61.115 55.000 0.00 0.00 35.57 2.93
2813 3776 1.619654 TGAATGGCCAGTTGGAGTTG 58.380 50.000 13.05 0.00 37.39 3.16
2814 3777 1.133513 TGAATGGCCAGTTGGAGTTGT 60.134 47.619 13.05 0.00 37.39 3.32
2815 3778 2.107378 TGAATGGCCAGTTGGAGTTGTA 59.893 45.455 13.05 0.00 37.39 2.41
2816 3779 2.200373 ATGGCCAGTTGGAGTTGTAC 57.800 50.000 13.05 0.00 37.39 2.90
3015 4234 4.871513 TGAGATGGGAAACGATATTCGAG 58.128 43.478 3.62 0.00 43.74 4.04
3053 4272 1.739067 AGCAGATTTACAAGGCGTCC 58.261 50.000 0.00 0.00 0.00 4.79
3093 4312 0.644937 AGGTAGAAGGGCCTCCATCT 59.355 55.000 6.46 9.24 42.95 2.90
3103 4322 2.108952 GGGCCTCCATCTATCATTGGTT 59.891 50.000 0.84 0.00 34.48 3.67
3104 4323 3.330701 GGGCCTCCATCTATCATTGGTTA 59.669 47.826 0.84 0.00 34.48 2.85
3105 4324 4.018050 GGGCCTCCATCTATCATTGGTTAT 60.018 45.833 0.84 0.00 34.48 1.89
3106 4325 5.191722 GGGCCTCCATCTATCATTGGTTATA 59.808 44.000 0.84 0.00 34.48 0.98
3272 4492 0.519077 GCTGAGTTGCTGGTAAGTGC 59.481 55.000 0.00 0.00 0.00 4.40
3356 4587 5.509716 TGCATGATGAATCCAAAGATGTC 57.490 39.130 0.00 0.00 31.29 3.06
3459 4903 2.094545 GGCAAGCAAACCTGGAGTTATG 60.095 50.000 0.00 0.00 37.88 1.90
3508 5050 7.145985 TCTTATCGGAATGTGTGCTAGTAATC 58.854 38.462 0.00 0.00 0.00 1.75
3509 5051 4.054780 TCGGAATGTGTGCTAGTAATCC 57.945 45.455 0.00 0.00 0.00 3.01
3510 5052 3.449377 TCGGAATGTGTGCTAGTAATCCA 59.551 43.478 0.00 0.00 0.00 3.41
3511 5053 4.081365 TCGGAATGTGTGCTAGTAATCCAA 60.081 41.667 0.00 0.00 0.00 3.53
3534 5084 1.530293 CTGACTGAGTGCAGCTTGTTC 59.470 52.381 0.00 0.00 46.26 3.18
3578 5128 9.537192 AATATATGATTGTTGTGCTTGAATTGG 57.463 29.630 0.00 0.00 0.00 3.16
3606 5156 0.391597 ACAAGCAAGCAAGCAAGCAT 59.608 45.000 10.52 0.00 36.85 3.79
3640 5190 4.639310 GCTGGTAGTAGCTAGTAAGTGACA 59.361 45.833 9.92 4.50 40.52 3.58
3642 5192 6.183360 GCTGGTAGTAGCTAGTAAGTGACAAT 60.183 42.308 9.92 0.00 40.52 2.71
3755 5319 3.071312 TCTTACGTAGCCACCAAGGAAAA 59.929 43.478 0.00 0.00 41.22 2.29
3782 5346 7.553881 TTCAGTAATAGAAAATGCAGCTACC 57.446 36.000 0.00 0.00 0.00 3.18
3805 5400 4.559862 ATGGTTCCTTCCTTCACACTAG 57.440 45.455 0.00 0.00 0.00 2.57
3822 5417 7.456725 TCACACTAGTAACTGTACTAACTCCT 58.543 38.462 0.00 0.00 41.31 3.69
3840 5435 3.948719 GTTCCCCACTCACGGCCA 61.949 66.667 2.24 0.00 0.00 5.36
3843 5438 2.035626 CCCCACTCACGGCCAATT 59.964 61.111 2.24 0.00 0.00 2.32
3852 5447 1.024046 CACGGCCAATTGATCGACCA 61.024 55.000 21.17 0.00 0.00 4.02
3859 5454 5.991606 CGGCCAATTGATCGACCATATATAT 59.008 40.000 7.12 0.00 0.00 0.86
3860 5455 7.151976 CGGCCAATTGATCGACCATATATATA 58.848 38.462 7.12 0.00 0.00 0.86
3861 5456 7.655732 CGGCCAATTGATCGACCATATATATAA 59.344 37.037 7.12 0.00 0.00 0.98
3862 5457 8.774586 GGCCAATTGATCGACCATATATATAAC 58.225 37.037 7.12 0.00 0.00 1.89
3863 5458 9.547753 GCCAATTGATCGACCATATATATAACT 57.452 33.333 7.12 0.00 0.00 2.24
3875 5470 9.824216 ACCATATATATAACTACCTATGGCGAT 57.176 33.333 14.01 0.00 39.34 4.58
3889 5484 1.507630 GCGATGGCATGTCTTTGCA 59.492 52.632 18.04 0.00 44.59 4.08
3891 5486 0.806868 CGATGGCATGTCTTTGCAGT 59.193 50.000 3.81 0.00 44.59 4.40
3894 5489 2.268762 TGGCATGTCTTTGCAGTGTA 57.731 45.000 0.00 0.00 44.59 2.90
3895 5490 2.153645 TGGCATGTCTTTGCAGTGTAG 58.846 47.619 0.00 0.00 44.59 2.74
3896 5491 2.224499 TGGCATGTCTTTGCAGTGTAGA 60.224 45.455 0.00 0.00 44.59 2.59
3909 5541 1.282157 AGTGTAGATTGCCAAGACCCC 59.718 52.381 0.00 0.00 0.00 4.95
3910 5542 1.004277 GTGTAGATTGCCAAGACCCCA 59.996 52.381 0.00 0.00 0.00 4.96
3924 5556 2.047655 CCCACGCTTTGGCTACGA 60.048 61.111 0.00 0.00 45.37 3.43
3987 5665 1.005569 CAGCTCCCATCCCATGCATAT 59.994 52.381 0.00 0.00 0.00 1.78
3988 5666 1.005569 AGCTCCCATCCCATGCATATG 59.994 52.381 0.00 0.00 0.00 1.78
3989 5667 1.471119 CTCCCATCCCATGCATATGC 58.529 55.000 21.09 21.09 42.50 3.14
4015 5693 5.849475 TGCTTTATCCATCCCTCCACTATTA 59.151 40.000 0.00 0.00 0.00 0.98
4066 5748 5.586643 GCAATAGAAAAGGCAGCTACTACTT 59.413 40.000 0.00 0.00 0.00 2.24
4067 5749 6.094186 GCAATAGAAAAGGCAGCTACTACTTT 59.906 38.462 0.00 0.00 34.87 2.66
4068 5750 7.280205 GCAATAGAAAAGGCAGCTACTACTTTA 59.720 37.037 0.00 0.00 33.21 1.85
4069 5751 9.331282 CAATAGAAAAGGCAGCTACTACTTTAT 57.669 33.333 0.00 0.00 33.21 1.40
4070 5752 9.907229 AATAGAAAAGGCAGCTACTACTTTATT 57.093 29.630 0.00 0.00 33.21 1.40
4071 5753 7.851387 AGAAAAGGCAGCTACTACTTTATTC 57.149 36.000 0.00 0.00 33.21 1.75
4072 5754 6.824196 AGAAAAGGCAGCTACTACTTTATTCC 59.176 38.462 0.00 0.00 33.21 3.01
4073 5755 5.959583 AAGGCAGCTACTACTTTATTCCT 57.040 39.130 0.00 0.00 0.00 3.36
4074 5756 5.959583 AGGCAGCTACTACTTTATTCCTT 57.040 39.130 0.00 0.00 0.00 3.36
4075 5757 5.919755 AGGCAGCTACTACTTTATTCCTTC 58.080 41.667 0.00 0.00 0.00 3.46
4076 5758 5.663556 AGGCAGCTACTACTTTATTCCTTCT 59.336 40.000 0.00 0.00 0.00 2.85
4077 5759 6.157123 AGGCAGCTACTACTTTATTCCTTCTT 59.843 38.462 0.00 0.00 0.00 2.52
4078 5760 6.480651 GGCAGCTACTACTTTATTCCTTCTTC 59.519 42.308 0.00 0.00 0.00 2.87
4079 5761 7.269316 GCAGCTACTACTTTATTCCTTCTTCT 58.731 38.462 0.00 0.00 0.00 2.85
4080 5762 7.766738 GCAGCTACTACTTTATTCCTTCTTCTT 59.233 37.037 0.00 0.00 0.00 2.52
4081 5763 9.660180 CAGCTACTACTTTATTCCTTCTTCTTT 57.340 33.333 0.00 0.00 0.00 2.52
4132 5829 1.288127 CTTGGTGAAAGCTGCTGCC 59.712 57.895 12.44 4.43 40.80 4.85
4146 5843 1.419762 TGCTGCCTTTCCTTCACACTA 59.580 47.619 0.00 0.00 0.00 2.74
4147 5844 1.807142 GCTGCCTTTCCTTCACACTAC 59.193 52.381 0.00 0.00 0.00 2.73
4262 5994 4.328208 GGATGGCATCCTCCTCCT 57.672 61.111 34.15 0.00 46.19 3.69
4263 5995 2.065483 GGATGGCATCCTCCTCCTC 58.935 63.158 34.15 9.54 46.19 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.513753 TCCCTGTGTTGTATTTGGCAG 58.486 47.619 0.00 0.00 0.00 4.85
1 2 2.666272 TCCCTGTGTTGTATTTGGCA 57.334 45.000 0.00 0.00 0.00 4.92
2 3 3.258123 ACATTCCCTGTGTTGTATTTGGC 59.742 43.478 0.00 0.00 36.48 4.52
3 4 5.229423 CAACATTCCCTGTGTTGTATTTGG 58.771 41.667 10.04 0.00 46.97 3.28
11 12 0.179004 TCCGCAACATTCCCTGTGTT 60.179 50.000 0.00 0.00 40.23 3.32
12 13 0.179004 TTCCGCAACATTCCCTGTGT 60.179 50.000 0.00 0.00 38.39 3.72
13 14 0.240945 GTTCCGCAACATTCCCTGTG 59.759 55.000 0.00 0.00 38.39 3.66
14 15 0.110486 AGTTCCGCAACATTCCCTGT 59.890 50.000 0.00 0.00 40.84 4.00
15 16 0.523072 CAGTTCCGCAACATTCCCTG 59.477 55.000 0.00 0.00 34.60 4.45
16 17 1.244019 GCAGTTCCGCAACATTCCCT 61.244 55.000 0.00 0.00 34.60 4.20
17 18 1.212751 GCAGTTCCGCAACATTCCC 59.787 57.895 0.00 0.00 34.60 3.97
18 19 1.212751 GGCAGTTCCGCAACATTCC 59.787 57.895 0.00 0.00 34.60 3.01
19 20 4.868195 GGCAGTTCCGCAACATTC 57.132 55.556 0.00 0.00 34.60 2.67
28 29 1.090052 GTAGATGTGCCGGCAGTTCC 61.090 60.000 33.73 19.43 0.00 3.62
29 30 0.108138 AGTAGATGTGCCGGCAGTTC 60.108 55.000 33.73 28.03 0.00 3.01
30 31 0.324943 AAGTAGATGTGCCGGCAGTT 59.675 50.000 33.73 21.15 0.00 3.16
31 32 0.391661 CAAGTAGATGTGCCGGCAGT 60.392 55.000 33.73 22.69 0.00 4.40
32 33 1.709147 GCAAGTAGATGTGCCGGCAG 61.709 60.000 33.73 16.27 34.58 4.85
33 34 1.745115 GCAAGTAGATGTGCCGGCA 60.745 57.895 29.03 29.03 34.58 5.69
34 35 1.026718 AAGCAAGTAGATGTGCCGGC 61.027 55.000 22.73 22.73 41.88 6.13
35 36 0.729116 CAAGCAAGTAGATGTGCCGG 59.271 55.000 0.00 0.00 41.88 6.13
36 37 1.442769 ACAAGCAAGTAGATGTGCCG 58.557 50.000 0.00 0.00 41.88 5.69
37 38 2.669391 GCAACAAGCAAGTAGATGTGCC 60.669 50.000 0.00 0.00 44.79 5.01
38 39 2.589014 GCAACAAGCAAGTAGATGTGC 58.411 47.619 0.00 0.00 44.79 4.57
86 87 1.825285 CGATCTCGCGAGCCATTTGG 61.825 60.000 30.97 11.34 38.53 3.28
87 88 1.561730 CGATCTCGCGAGCCATTTG 59.438 57.895 30.97 14.67 0.00 2.32
88 89 4.018609 CGATCTCGCGAGCCATTT 57.981 55.556 30.97 12.58 0.00 2.32
112 113 3.695606 GAGGTGAGGAGGCGCACA 61.696 66.667 10.83 0.00 36.76 4.57
176 177 4.657824 CGGCGAGGTTGGTGACGT 62.658 66.667 0.00 0.00 0.00 4.34
200 201 2.292845 TGATCTCGCTAGCAGTCATCTG 59.707 50.000 16.45 0.00 43.87 2.90
201 202 2.293122 GTGATCTCGCTAGCAGTCATCT 59.707 50.000 16.45 0.00 0.00 2.90
210 211 1.360551 CGGTGGGTGATCTCGCTAG 59.639 63.158 12.34 0.00 0.00 3.42
212 213 2.227089 GAACGGTGGGTGATCTCGCT 62.227 60.000 12.34 0.00 0.00 4.93
230 231 3.767268 ATGGAGGGGAGGAGGCGA 61.767 66.667 0.00 0.00 0.00 5.54
251 252 1.876156 GGCGTTCAATCATGGAGATCC 59.124 52.381 0.00 0.00 35.39 3.36
260 261 0.400213 AACAGGGAGGCGTTCAATCA 59.600 50.000 0.00 0.00 0.00 2.57
261 262 0.804989 CAACAGGGAGGCGTTCAATC 59.195 55.000 0.00 0.00 0.00 2.67
264 265 1.070786 GTCAACAGGGAGGCGTTCA 59.929 57.895 0.00 0.00 0.00 3.18
308 309 2.746277 AATGGCGAGGTTGGCGAC 60.746 61.111 0.00 0.00 37.28 5.19
321 322 3.124921 GGTCGTCCGCACCAATGG 61.125 66.667 0.00 0.00 33.63 3.16
363 364 1.421410 CGGCATGGAAGTGAGTACGC 61.421 60.000 0.00 0.00 0.00 4.42
365 366 0.535335 TCCGGCATGGAAGTGAGTAC 59.465 55.000 0.00 0.00 46.38 2.73
421 422 2.527875 GCTCCTCCCCGGATCCAT 60.528 66.667 13.41 0.00 42.12 3.41
443 444 3.866582 GGACGATGGGGAGGCTGG 61.867 72.222 0.00 0.00 0.00 4.85
446 447 2.444895 AGAGGACGATGGGGAGGC 60.445 66.667 0.00 0.00 0.00 4.70
451 452 1.326213 ACTGCTGAGAGGACGATGGG 61.326 60.000 0.00 0.00 0.00 4.00
452 453 0.534412 AACTGCTGAGAGGACGATGG 59.466 55.000 0.00 0.00 0.00 3.51
493 494 3.006752 CCACCACCATTAAGCAACAATGT 59.993 43.478 0.00 0.00 32.55 2.71
495 496 3.006752 CACCACCACCATTAAGCAACAAT 59.993 43.478 0.00 0.00 0.00 2.71
543 544 4.520846 GCAGAAACATCCGCGCCG 62.521 66.667 0.00 0.00 0.00 6.46
594 619 5.946942 ATTTGGAACATCTCTGCTCTCTA 57.053 39.130 0.00 0.00 39.30 2.43
600 625 3.916761 TGCAAATTTGGAACATCTCTGC 58.083 40.909 19.47 2.00 39.30 4.26
611 636 5.626211 ACGAAAACTTTGTTGCAAATTTGG 58.374 33.333 19.47 3.80 0.00 3.28
612 637 6.576684 ACAACGAAAACTTTGTTGCAAATTTG 59.423 30.769 14.03 14.03 45.18 2.32
613 638 6.663565 ACAACGAAAACTTTGTTGCAAATTT 58.336 28.000 16.09 0.00 45.18 1.82
614 639 6.234723 ACAACGAAAACTTTGTTGCAAATT 57.765 29.167 16.09 0.00 45.18 1.82
628 656 4.902443 TGCAACATTCCTACAACGAAAA 57.098 36.364 0.00 0.00 0.00 2.29
632 660 3.617540 TGTTGCAACATTCCTACAACG 57.382 42.857 27.96 0.00 42.68 4.10
637 665 4.973168 AGACTCTTGTTGCAACATTCCTA 58.027 39.130 31.48 16.13 38.95 2.94
650 678 5.822519 TGTATTTCTGCAACAAGACTCTTGT 59.177 36.000 17.29 17.29 0.00 3.16
712 745 1.067084 CCGATGATGCGAGCTGTCT 59.933 57.895 0.00 0.00 0.00 3.41
730 763 1.300233 CCTTGCGAGCCGTCCTATC 60.300 63.158 0.00 0.00 0.00 2.08
749 782 4.317444 TACACGTTGGCCCCACCG 62.317 66.667 0.00 2.56 43.94 4.94
752 785 3.561241 TGCTACACGTTGGCCCCA 61.561 61.111 0.00 0.00 0.00 4.96
753 786 3.053896 GTGCTACACGTTGGCCCC 61.054 66.667 0.00 0.00 0.00 5.80
762 795 2.032071 ACAAGGGGCGTGCTACAC 59.968 61.111 0.00 0.00 0.00 2.90
763 796 2.046009 TTGACAAGGGGCGTGCTACA 62.046 55.000 0.00 0.00 0.00 2.74
770 803 0.893270 TGTGGATTTGACAAGGGGCG 60.893 55.000 0.00 0.00 0.00 6.13
774 807 8.306038 TCTTCATAAATTGTGGATTTGACAAGG 58.694 33.333 0.00 0.00 38.40 3.61
841 874 4.489810 ACGAGAGAACATAAGACAGCTTG 58.510 43.478 0.00 0.00 35.56 4.01
842 875 4.792521 ACGAGAGAACATAAGACAGCTT 57.207 40.909 0.00 0.00 38.15 3.74
843 876 4.673061 CGAACGAGAGAACATAAGACAGCT 60.673 45.833 0.00 0.00 0.00 4.24
844 877 3.544285 CGAACGAGAGAACATAAGACAGC 59.456 47.826 0.00 0.00 0.00 4.40
845 878 4.724303 ACGAACGAGAGAACATAAGACAG 58.276 43.478 0.14 0.00 0.00 3.51
846 879 4.761235 ACGAACGAGAGAACATAAGACA 57.239 40.909 0.14 0.00 0.00 3.41
847 880 4.201504 GCAACGAACGAGAGAACATAAGAC 60.202 45.833 0.14 0.00 0.00 3.01
850 883 2.991190 GGCAACGAACGAGAGAACATAA 59.009 45.455 0.14 0.00 0.00 1.90
852 885 1.000955 AGGCAACGAACGAGAGAACAT 59.999 47.619 0.14 0.00 46.39 2.71
855 888 1.497991 CAAGGCAACGAACGAGAGAA 58.502 50.000 0.14 0.00 46.39 2.87
856 889 0.319555 CCAAGGCAACGAACGAGAGA 60.320 55.000 0.14 0.00 46.39 3.10
858 891 0.319555 CTCCAAGGCAACGAACGAGA 60.320 55.000 0.14 0.00 46.39 4.04
859 892 0.600255 ACTCCAAGGCAACGAACGAG 60.600 55.000 0.14 0.00 46.39 4.18
860 893 0.179067 AACTCCAAGGCAACGAACGA 60.179 50.000 0.14 0.00 46.39 3.85
861 894 0.661020 AAACTCCAAGGCAACGAACG 59.339 50.000 0.00 0.00 46.39 3.95
862 895 2.098443 TCAAAACTCCAAGGCAACGAAC 59.902 45.455 0.00 0.00 46.39 3.95
864 897 1.946768 CTCAAAACTCCAAGGCAACGA 59.053 47.619 0.00 0.00 46.39 3.85
865 898 1.946768 TCTCAAAACTCCAAGGCAACG 59.053 47.619 0.00 0.00 46.39 4.10
867 900 5.363580 AGATTTTCTCAAAACTCCAAGGCAA 59.636 36.000 0.00 0.00 32.37 4.52
868 901 4.895297 AGATTTTCTCAAAACTCCAAGGCA 59.105 37.500 0.00 0.00 32.37 4.75
869 902 5.459536 AGATTTTCTCAAAACTCCAAGGC 57.540 39.130 0.00 0.00 32.37 4.35
889 922 9.384849 GGGGGTTTTAGGACTAGTAATAATAGA 57.615 37.037 1.47 0.00 0.00 1.98
890 923 9.162733 TGGGGGTTTTAGGACTAGTAATAATAG 57.837 37.037 0.00 0.00 0.00 1.73
891 924 8.937835 GTGGGGGTTTTAGGACTAGTAATAATA 58.062 37.037 0.00 0.00 0.00 0.98
892 925 7.419403 CGTGGGGGTTTTAGGACTAGTAATAAT 60.419 40.741 0.00 0.00 0.00 1.28
893 926 6.127083 CGTGGGGGTTTTAGGACTAGTAATAA 60.127 42.308 0.00 0.00 0.00 1.40
894 927 5.363580 CGTGGGGGTTTTAGGACTAGTAATA 59.636 44.000 0.00 0.00 0.00 0.98
895 928 4.162888 CGTGGGGGTTTTAGGACTAGTAAT 59.837 45.833 0.00 0.00 0.00 1.89
896 929 3.515104 CGTGGGGGTTTTAGGACTAGTAA 59.485 47.826 0.00 0.00 0.00 2.24
902 935 1.347378 TGTACGTGGGGGTTTTAGGAC 59.653 52.381 0.00 0.00 0.00 3.85
905 938 1.348696 AGGTGTACGTGGGGGTTTTAG 59.651 52.381 0.00 0.00 0.00 1.85
913 946 2.978824 CAGGGAGGTGTACGTGGG 59.021 66.667 0.00 0.00 0.00 4.61
946 979 1.137086 AGGCAGCGTTGTGTATCTAGG 59.863 52.381 0.00 0.00 0.00 3.02
954 987 2.049156 TCGAGAGGCAGCGTTGTG 60.049 61.111 0.00 0.00 0.00 3.33
956 989 3.175240 CGTCGAGAGGCAGCGTTG 61.175 66.667 0.00 0.00 33.27 4.10
961 994 3.500642 TCGAGCGTCGAGAGGCAG 61.501 66.667 18.16 12.09 44.82 4.85
969 1002 0.714439 TAGCTATCGATCGAGCGTCG 59.286 55.000 23.61 11.91 43.72 5.12
970 1003 1.994074 TCTAGCTATCGATCGAGCGTC 59.006 52.381 23.61 11.89 43.72 5.19
972 1005 3.362596 GCTATCTAGCTATCGATCGAGCG 60.363 52.174 23.84 18.51 45.62 5.03
973 1006 3.362596 CGCTATCTAGCTATCGATCGAGC 60.363 52.174 23.84 21.01 46.85 5.03
974 1007 4.045783 TCGCTATCTAGCTATCGATCGAG 58.954 47.826 23.84 11.87 46.85 4.04
990 1067 2.046892 GCGGCCATGGATCGCTAT 60.047 61.111 31.89 0.00 45.16 2.97
1006 1083 2.391389 GCTGTGGCCTCGTTACTGC 61.391 63.158 3.32 5.20 33.35 4.40
1013 1090 2.435586 CTTCCAGCTGTGGCCTCG 60.436 66.667 13.81 0.00 44.60 4.63
1074 1151 1.395826 CGGGGAGAGTGATGGAGTCC 61.396 65.000 0.73 0.73 0.00 3.85
1110 1187 1.694150 GATGTGCTATACCTGCAGGGA 59.306 52.381 35.42 30.13 41.41 4.20
1127 1204 2.225491 GTCGAAGAGGAGAGGATCGATG 59.775 54.545 0.54 0.00 43.42 3.84
1130 1207 0.948678 GGTCGAAGAGGAGAGGATCG 59.051 60.000 0.00 0.00 37.47 3.69
1131 1208 2.358322 AGGTCGAAGAGGAGAGGATC 57.642 55.000 0.00 0.00 36.95 3.36
1132 1209 3.955524 TTAGGTCGAAGAGGAGAGGAT 57.044 47.619 0.00 0.00 36.95 3.24
1134 1211 3.319689 GGAATTAGGTCGAAGAGGAGAGG 59.680 52.174 0.00 0.00 36.95 3.69
1136 1213 4.252570 AGGAATTAGGTCGAAGAGGAGA 57.747 45.455 0.00 0.00 36.95 3.71
1137 1214 4.202172 GGAAGGAATTAGGTCGAAGAGGAG 60.202 50.000 0.00 0.00 36.95 3.69
1138 1215 3.705072 GGAAGGAATTAGGTCGAAGAGGA 59.295 47.826 0.00 0.00 36.95 3.71
1139 1216 3.707102 AGGAAGGAATTAGGTCGAAGAGG 59.293 47.826 0.00 0.00 36.95 3.69
1140 1217 4.402793 TGAGGAAGGAATTAGGTCGAAGAG 59.597 45.833 0.00 0.00 36.95 2.85
1141 1218 4.350245 TGAGGAAGGAATTAGGTCGAAGA 58.650 43.478 0.00 0.00 0.00 2.87
1142 1219 4.737855 TGAGGAAGGAATTAGGTCGAAG 57.262 45.455 0.00 0.00 0.00 3.79
1143 1220 4.714802 TCATGAGGAAGGAATTAGGTCGAA 59.285 41.667 0.00 0.00 0.00 3.71
1144 1221 4.286707 TCATGAGGAAGGAATTAGGTCGA 58.713 43.478 0.00 0.00 0.00 4.20
1145 1222 4.672587 TCATGAGGAAGGAATTAGGTCG 57.327 45.455 0.00 0.00 0.00 4.79
1146 1223 5.011125 TCGATCATGAGGAAGGAATTAGGTC 59.989 44.000 0.09 0.00 0.00 3.85
1147 1224 4.901849 TCGATCATGAGGAAGGAATTAGGT 59.098 41.667 0.09 0.00 0.00 3.08
1148 1225 5.233988 GTCGATCATGAGGAAGGAATTAGG 58.766 45.833 0.09 0.00 0.00 2.69
1149 1226 5.221521 TGGTCGATCATGAGGAAGGAATTAG 60.222 44.000 0.09 0.00 0.00 1.73
1150 1227 4.653801 TGGTCGATCATGAGGAAGGAATTA 59.346 41.667 0.09 0.00 0.00 1.40
1151 1228 3.455910 TGGTCGATCATGAGGAAGGAATT 59.544 43.478 0.09 0.00 0.00 2.17
1152 1229 3.041211 TGGTCGATCATGAGGAAGGAAT 58.959 45.455 0.09 0.00 0.00 3.01
1153 1230 2.466846 TGGTCGATCATGAGGAAGGAA 58.533 47.619 0.09 0.00 0.00 3.36
1154 1231 2.159179 TGGTCGATCATGAGGAAGGA 57.841 50.000 0.09 0.00 0.00 3.36
1155 1232 2.988010 TTGGTCGATCATGAGGAAGG 57.012 50.000 0.00 0.00 0.00 3.46
1156 1233 4.391216 GCATATTGGTCGATCATGAGGAAG 59.609 45.833 0.00 0.00 0.00 3.46
1157 1234 4.202346 TGCATATTGGTCGATCATGAGGAA 60.202 41.667 0.00 0.00 0.00 3.36
1158 1235 3.324556 TGCATATTGGTCGATCATGAGGA 59.675 43.478 0.00 0.00 0.00 3.71
1159 1236 3.667360 TGCATATTGGTCGATCATGAGG 58.333 45.455 0.00 0.00 0.00 3.86
1160 1237 4.436986 GCATGCATATTGGTCGATCATGAG 60.437 45.833 14.21 0.00 33.64 2.90
1163 1240 3.414269 TGCATGCATATTGGTCGATCAT 58.586 40.909 18.46 0.00 0.00 2.45
1186 1263 2.774799 GCCGTGGGTTGGATCATGC 61.775 63.158 0.00 0.00 0.00 4.06
1187 1264 2.120909 GGCCGTGGGTTGGATCATG 61.121 63.158 0.00 0.00 0.00 3.07
1188 1265 2.275418 GGCCGTGGGTTGGATCAT 59.725 61.111 0.00 0.00 0.00 2.45
1189 1266 4.041762 GGGCCGTGGGTTGGATCA 62.042 66.667 0.00 0.00 0.00 2.92
1190 1267 4.815108 GGGGCCGTGGGTTGGATC 62.815 72.222 0.00 0.00 0.00 3.36
1211 1288 5.599656 ACGTACCTAGTTGGGCAAGATATAA 59.400 40.000 0.00 0.00 41.11 0.98
1226 1303 4.201783 GGTAAATTGCTTGCACGTACCTAG 60.202 45.833 15.57 0.00 0.00 3.02
1234 1311 4.081697 AGTTATGGGGTAAATTGCTTGCAC 60.082 41.667 0.00 0.00 0.00 4.57
1255 1332 5.297569 AGAGAGTTAGCAAGAACCAAAGT 57.702 39.130 0.00 0.00 0.00 2.66
1299 1380 4.331443 CGTTGCTGCACATATTACAGGTAA 59.669 41.667 0.00 0.00 31.94 2.85
1303 1384 4.270808 TCATCGTTGCTGCACATATTACAG 59.729 41.667 0.00 0.00 34.48 2.74
1305 1386 4.794248 TCATCGTTGCTGCACATATTAC 57.206 40.909 0.00 0.00 0.00 1.89
1319 1400 7.103641 TCATCATCATCATCATCATCATCGTT 58.896 34.615 0.00 0.00 0.00 3.85
1333 1414 4.591924 AGCAGTACCTCATCATCATCATCA 59.408 41.667 0.00 0.00 0.00 3.07
1336 1417 5.143369 AGTAGCAGTACCTCATCATCATCA 58.857 41.667 0.00 0.00 0.00 3.07
1337 1418 5.720371 AGTAGCAGTACCTCATCATCATC 57.280 43.478 0.00 0.00 0.00 2.92
1338 1419 5.600069 TCAAGTAGCAGTACCTCATCATCAT 59.400 40.000 0.00 0.00 0.00 2.45
1339 1420 4.956075 TCAAGTAGCAGTACCTCATCATCA 59.044 41.667 0.00 0.00 0.00 3.07
1340 1421 5.300539 TCTCAAGTAGCAGTACCTCATCATC 59.699 44.000 0.00 0.00 0.00 2.92
1341 1422 5.204292 TCTCAAGTAGCAGTACCTCATCAT 58.796 41.667 0.00 0.00 0.00 2.45
1342 1423 4.600062 TCTCAAGTAGCAGTACCTCATCA 58.400 43.478 0.00 0.00 0.00 3.07
1343 1424 4.499019 GCTCTCAAGTAGCAGTACCTCATC 60.499 50.000 0.00 0.00 39.83 2.92
1344 1425 3.383185 GCTCTCAAGTAGCAGTACCTCAT 59.617 47.826 0.00 0.00 39.83 2.90
1345 1426 2.755655 GCTCTCAAGTAGCAGTACCTCA 59.244 50.000 0.00 0.00 39.83 3.86
1346 1427 2.223386 CGCTCTCAAGTAGCAGTACCTC 60.223 54.545 0.00 0.00 40.08 3.85
1347 1428 1.746220 CGCTCTCAAGTAGCAGTACCT 59.254 52.381 0.00 0.00 40.08 3.08
1366 1447 2.190578 GGAGGAGGGCCAACATCG 59.809 66.667 6.18 0.00 36.29 3.84
1384 1465 0.456995 CGAAACCTGTCTCGAGCTCC 60.457 60.000 7.81 0.00 37.23 4.70
1396 1477 0.682852 TGATCACGTTCCCGAAACCT 59.317 50.000 0.00 0.00 37.88 3.50
1404 1485 2.333926 TGTCGACAATGATCACGTTCC 58.666 47.619 17.62 0.00 0.00 3.62
1417 1498 2.503331 ACAATTGGCAGATTGTCGACA 58.497 42.857 15.76 15.76 44.65 4.35
1430 1511 0.958382 TTCTCCGCCGGAACAATTGG 60.958 55.000 7.50 0.00 0.00 3.16
1438 1519 1.141019 CTCGAATTTCTCCGCCGGA 59.859 57.895 5.05 5.37 0.00 5.14
1441 1522 1.154814 GCCTCTCGAATTTCTCCGCC 61.155 60.000 0.00 0.00 0.00 6.13
1443 1524 1.565305 CAGCCTCTCGAATTTCTCCG 58.435 55.000 0.00 0.00 0.00 4.63
1463 1544 2.517391 ATTGCGCGCATGACACACTG 62.517 55.000 36.83 0.00 0.00 3.66
1466 1547 0.739112 TAGATTGCGCGCATGACACA 60.739 50.000 36.83 20.01 0.00 3.72
1487 1568 2.354003 CCTTGATGACACCAATTTGGCC 60.354 50.000 15.49 0.00 42.67 5.36
1513 1594 7.066043 GTGTAGAGTATAGGAATCCATAGACCG 59.934 44.444 0.61 0.00 0.00 4.79
1517 1598 7.122948 GGTGGTGTAGAGTATAGGAATCCATAG 59.877 44.444 0.61 0.00 0.00 2.23
1519 1600 5.780793 GGTGGTGTAGAGTATAGGAATCCAT 59.219 44.000 0.61 0.00 0.00 3.41
1561 1642 3.304525 CCACCTTAGGAGTAGCGTATTCG 60.305 52.174 4.77 0.00 40.37 3.34
1564 1645 2.091444 ACCCACCTTAGGAGTAGCGTAT 60.091 50.000 4.77 0.00 0.00 3.06
1566 1647 0.040794 ACCCACCTTAGGAGTAGCGT 59.959 55.000 4.77 0.00 0.00 5.07
1577 1658 5.853572 TCAGGAACTAAAATACCCACCTT 57.146 39.130 0.00 0.00 36.02 3.50
1579 1660 8.762481 ATAAATCAGGAACTAAAATACCCACC 57.238 34.615 0.00 0.00 36.02 4.61
1602 1683 7.335924 CCACAGGAAAGATAAACGGAAAAGATA 59.664 37.037 0.00 0.00 0.00 1.98
1603 1684 6.151144 CCACAGGAAAGATAAACGGAAAAGAT 59.849 38.462 0.00 0.00 0.00 2.40
1604 1685 5.472137 CCACAGGAAAGATAAACGGAAAAGA 59.528 40.000 0.00 0.00 0.00 2.52
1605 1686 5.472137 TCCACAGGAAAGATAAACGGAAAAG 59.528 40.000 0.00 0.00 0.00 2.27
1606 1687 5.378332 TCCACAGGAAAGATAAACGGAAAA 58.622 37.500 0.00 0.00 0.00 2.29
1607 1688 4.975631 TCCACAGGAAAGATAAACGGAAA 58.024 39.130 0.00 0.00 0.00 3.13
1608 1689 4.627284 TCCACAGGAAAGATAAACGGAA 57.373 40.909 0.00 0.00 0.00 4.30
1609 1690 4.627284 TTCCACAGGAAAGATAAACGGA 57.373 40.909 0.00 0.00 38.93 4.69
1664 1749 7.883391 TGAAAAGGTTTGGTCAGTAATGTAA 57.117 32.000 0.00 0.00 0.00 2.41
1665 1750 7.558444 AGTTGAAAAGGTTTGGTCAGTAATGTA 59.442 33.333 0.00 0.00 0.00 2.29
1668 1753 7.418337 AAGTTGAAAAGGTTTGGTCAGTAAT 57.582 32.000 0.00 0.00 0.00 1.89
1671 1756 5.245075 TGAAAGTTGAAAAGGTTTGGTCAGT 59.755 36.000 0.00 0.00 0.00 3.41
1672 1757 5.719173 TGAAAGTTGAAAAGGTTTGGTCAG 58.281 37.500 0.00 0.00 0.00 3.51
1673 1758 5.730296 TGAAAGTTGAAAAGGTTTGGTCA 57.270 34.783 0.00 0.00 0.00 4.02
1674 1759 6.456853 GCAATGAAAGTTGAAAAGGTTTGGTC 60.457 38.462 0.00 0.00 0.00 4.02
1676 1761 5.502220 CGCAATGAAAGTTGAAAAGGTTTGG 60.502 40.000 0.00 0.00 0.00 3.28
1677 1762 5.063312 ACGCAATGAAAGTTGAAAAGGTTTG 59.937 36.000 0.00 0.00 0.00 2.93
1679 1764 4.754322 ACGCAATGAAAGTTGAAAAGGTT 58.246 34.783 0.00 0.00 0.00 3.50
1680 1765 4.385358 ACGCAATGAAAGTTGAAAAGGT 57.615 36.364 0.00 0.00 0.00 3.50
1681 1766 5.069485 CAACGCAATGAAAGTTGAAAAGG 57.931 39.130 9.78 0.00 45.66 3.11
1687 1773 6.246332 CGTATAACTCAACGCAATGAAAGTTG 59.754 38.462 9.29 9.29 44.57 3.16
1688 1774 6.146510 TCGTATAACTCAACGCAATGAAAGTT 59.853 34.615 0.00 0.00 38.94 2.66
1690 1776 5.952064 GTCGTATAACTCAACGCAATGAAAG 59.048 40.000 0.00 0.00 38.94 2.62
1693 1779 3.544682 CGTCGTATAACTCAACGCAATGA 59.455 43.478 0.00 0.00 38.94 2.57
1700 1786 5.745294 TGGCTAATTCGTCGTATAACTCAAC 59.255 40.000 0.00 0.00 0.00 3.18
1707 1793 7.922278 ACAAGTTTATGGCTAATTCGTCGTATA 59.078 33.333 0.00 0.00 0.00 1.47
1708 1794 6.759827 ACAAGTTTATGGCTAATTCGTCGTAT 59.240 34.615 0.00 0.00 0.00 3.06
1711 1797 5.464965 ACAAGTTTATGGCTAATTCGTCG 57.535 39.130 0.00 0.00 0.00 5.12
1713 1799 5.708230 TCCAACAAGTTTATGGCTAATTCGT 59.292 36.000 0.00 0.00 34.13 3.85
1714 1800 6.027749 GTCCAACAAGTTTATGGCTAATTCG 58.972 40.000 0.00 0.00 34.13 3.34
1727 1813 7.687941 ATATCTTTCAATCGTCCAACAAGTT 57.312 32.000 0.00 0.00 0.00 2.66
1751 1837 9.877137 GCACATTCATCGTCAAATAACATTATA 57.123 29.630 0.00 0.00 0.00 0.98
1752 1838 7.862372 GGCACATTCATCGTCAAATAACATTAT 59.138 33.333 0.00 0.00 0.00 1.28
1753 1839 7.148171 TGGCACATTCATCGTCAAATAACATTA 60.148 33.333 0.00 0.00 0.00 1.90
1754 1840 6.035843 GGCACATTCATCGTCAAATAACATT 58.964 36.000 0.00 0.00 0.00 2.71
1755 1841 5.125257 TGGCACATTCATCGTCAAATAACAT 59.875 36.000 0.00 0.00 0.00 2.71
1758 1844 4.096231 CCTGGCACATTCATCGTCAAATAA 59.904 41.667 0.00 0.00 38.20 1.40
1759 1845 3.627123 CCTGGCACATTCATCGTCAAATA 59.373 43.478 0.00 0.00 38.20 1.40
1760 1846 2.424601 CCTGGCACATTCATCGTCAAAT 59.575 45.455 0.00 0.00 38.20 2.32
1761 1847 1.811965 CCTGGCACATTCATCGTCAAA 59.188 47.619 0.00 0.00 38.20 2.69
1762 1848 1.003003 TCCTGGCACATTCATCGTCAA 59.997 47.619 0.00 0.00 38.20 3.18
1763 1849 0.612744 TCCTGGCACATTCATCGTCA 59.387 50.000 0.00 0.00 38.20 4.35
1764 1850 1.667724 CTTCCTGGCACATTCATCGTC 59.332 52.381 0.00 0.00 38.20 4.20
1765 1851 1.742761 CTTCCTGGCACATTCATCGT 58.257 50.000 0.00 0.00 38.20 3.73
1766 1852 0.379669 GCTTCCTGGCACATTCATCG 59.620 55.000 0.00 0.00 38.20 3.84
1767 1853 1.404391 CTGCTTCCTGGCACATTCATC 59.596 52.381 0.00 0.00 38.20 2.92
1768 1854 1.005097 TCTGCTTCCTGGCACATTCAT 59.995 47.619 0.00 0.00 38.20 2.57
1769 1855 0.401356 TCTGCTTCCTGGCACATTCA 59.599 50.000 0.00 0.00 38.20 2.57
1770 1856 1.093159 CTCTGCTTCCTGGCACATTC 58.907 55.000 0.00 0.00 38.20 2.67
1771 1857 0.964358 GCTCTGCTTCCTGGCACATT 60.964 55.000 0.00 0.00 38.20 2.71
1776 1862 2.698763 GCAAGCTCTGCTTCCTGGC 61.699 63.158 11.98 0.00 46.77 4.85
1786 1872 0.884704 TTTTTCGCCTCGCAAGCTCT 60.885 50.000 0.00 0.00 37.18 4.09
1806 1892 0.451783 GTCCAGCGCATAAAGGTTGG 59.548 55.000 11.47 5.85 0.00 3.77
1813 1899 1.271108 TGAAACCTGTCCAGCGCATAA 60.271 47.619 11.47 0.00 0.00 1.90
1816 1902 1.891919 GTGAAACCTGTCCAGCGCA 60.892 57.895 11.47 0.00 0.00 6.09
1819 1905 1.680338 ACTTGTGAAACCTGTCCAGC 58.320 50.000 0.00 0.00 34.36 4.85
1820 1906 2.618709 GGAACTTGTGAAACCTGTCCAG 59.381 50.000 0.00 0.00 34.36 3.86
1830 1916 5.197451 ACATGTTAACCTGGAACTTGTGAA 58.803 37.500 14.34 0.00 41.19 3.18
1831 1917 4.787551 ACATGTTAACCTGGAACTTGTGA 58.212 39.130 14.34 0.00 41.19 3.58
1836 1922 4.345859 TCGAACATGTTAACCTGGAACT 57.654 40.909 11.95 0.00 0.00 3.01
1837 1923 4.693566 TCATCGAACATGTTAACCTGGAAC 59.306 41.667 11.95 0.00 0.00 3.62
1840 1926 4.253685 AGTCATCGAACATGTTAACCTGG 58.746 43.478 11.95 0.00 0.00 4.45
1843 1929 6.077838 GTCAAAGTCATCGAACATGTTAACC 58.922 40.000 11.95 0.00 0.00 2.85
1846 1932 6.481976 ACTTGTCAAAGTCATCGAACATGTTA 59.518 34.615 11.95 0.00 43.34 2.41
1849 1935 5.348418 ACTTGTCAAAGTCATCGAACATG 57.652 39.130 0.00 0.00 43.34 3.21
1855 1941 6.466308 TTGATGTACTTGTCAAAGTCATCG 57.534 37.500 16.86 0.00 43.34 3.84
1864 1950 4.346709 TCAGGGACTTTGATGTACTTGTCA 59.653 41.667 0.00 0.00 34.60 3.58
1876 1962 2.162681 GTCCATTGGTCAGGGACTTTG 58.837 52.381 1.86 0.00 45.99 2.77
1877 1963 2.586648 GTCCATTGGTCAGGGACTTT 57.413 50.000 1.86 0.00 45.99 2.66
1899 1985 6.433716 TGTGTATTGCTTGATTTCATCAGGAA 59.566 34.615 0.28 0.00 40.94 3.36
1903 1989 5.711506 AGGTGTGTATTGCTTGATTTCATCA 59.288 36.000 0.00 0.00 37.55 3.07
1904 1990 6.032094 CAGGTGTGTATTGCTTGATTTCATC 58.968 40.000 0.00 0.00 0.00 2.92
1905 1991 5.622914 GCAGGTGTGTATTGCTTGATTTCAT 60.623 40.000 0.00 0.00 35.05 2.57
1912 1998 3.681705 CGCAGGTGTGTATTGCTTG 57.318 52.632 0.00 0.00 35.73 4.01
1976 2062 2.288948 TGGTTGGCAATGCATCAGAAAC 60.289 45.455 7.79 3.27 0.00 2.78
1996 2082 6.090628 ACACATTAAACGCCAAGCATTAATTG 59.909 34.615 5.21 8.55 32.08 2.32
1999 2085 4.920340 CACACATTAAACGCCAAGCATTAA 59.080 37.500 0.00 0.00 0.00 1.40
2005 2091 4.323336 GCAATACACACATTAAACGCCAAG 59.677 41.667 0.00 0.00 0.00 3.61
2006 2092 4.230657 GCAATACACACATTAAACGCCAA 58.769 39.130 0.00 0.00 0.00 4.52
2008 2094 3.827625 TGCAATACACACATTAAACGCC 58.172 40.909 0.00 0.00 0.00 5.68
2009 2095 3.300590 GCTGCAATACACACATTAAACGC 59.699 43.478 0.00 0.00 0.00 4.84
2010 2096 3.851403 GGCTGCAATACACACATTAAACG 59.149 43.478 0.50 0.00 0.00 3.60
2011 2097 5.059404 AGGCTGCAATACACACATTAAAC 57.941 39.130 0.50 0.00 0.00 2.01
2012 2098 6.432783 AGTTAGGCTGCAATACACACATTAAA 59.567 34.615 0.50 0.00 0.00 1.52
2013 2099 5.943416 AGTTAGGCTGCAATACACACATTAA 59.057 36.000 0.50 0.00 0.00 1.40
2015 2101 4.335416 AGTTAGGCTGCAATACACACATT 58.665 39.130 0.50 0.00 0.00 2.71
2017 2103 3.417069 AGTTAGGCTGCAATACACACA 57.583 42.857 0.50 0.00 0.00 3.72
2018 2104 3.670627 GCAAGTTAGGCTGCAATACACAC 60.671 47.826 0.50 0.00 0.00 3.82
2020 2106 2.487762 TGCAAGTTAGGCTGCAATACAC 59.512 45.455 0.50 0.00 34.08 2.90
2036 2124 2.161855 TCCATTAGCCACTTGTGCAAG 58.838 47.619 10.09 10.09 43.79 4.01
2042 2130 2.734755 TCCCATCCATTAGCCACTTG 57.265 50.000 0.00 0.00 0.00 3.16
2044 2132 1.496429 CCTTCCCATCCATTAGCCACT 59.504 52.381 0.00 0.00 0.00 4.00
2059 2147 0.321996 AAACTGGTCTCTCGCCTTCC 59.678 55.000 0.00 0.00 0.00 3.46
2066 2154 2.028930 ACGGATGACAAACTGGTCTCTC 60.029 50.000 0.00 0.00 38.61 3.20
2102 2190 3.526931 ACATCATTCCAGTACACCTCG 57.473 47.619 0.00 0.00 0.00 4.63
2117 2205 1.337703 GCAAGTTCAGGCACAACATCA 59.662 47.619 1.97 0.00 0.00 3.07
2153 2241 7.678927 GCAAGAAGTCCGAAAAGAAAACTAAGT 60.679 37.037 0.00 0.00 0.00 2.24
2157 2245 4.398044 TGCAAGAAGTCCGAAAAGAAAACT 59.602 37.500 0.00 0.00 0.00 2.66
2252 2340 9.557061 CAAGCTAGGTCAATATATGCATGATAT 57.443 33.333 10.16 6.20 0.00 1.63
2262 2350 5.582950 AATGGGCAAGCTAGGTCAATATA 57.417 39.130 0.00 0.00 0.00 0.86
2268 2356 4.737649 GCAAAATAATGGGCAAGCTAGGTC 60.738 45.833 0.00 0.00 0.00 3.85
2271 2359 4.660789 AGCAAAATAATGGGCAAGCTAG 57.339 40.909 0.00 0.00 0.00 3.42
2272 2360 4.757594 CAAGCAAAATAATGGGCAAGCTA 58.242 39.130 0.00 0.00 0.00 3.32
2273 2361 3.602483 CAAGCAAAATAATGGGCAAGCT 58.398 40.909 0.00 0.00 0.00 3.74
2274 2362 2.096335 GCAAGCAAAATAATGGGCAAGC 59.904 45.455 0.00 0.00 0.00 4.01
2301 2389 4.695455 CACTCAACAAAACTATCGGTCCAT 59.305 41.667 0.00 0.00 0.00 3.41
2302 2390 4.062293 CACTCAACAAAACTATCGGTCCA 58.938 43.478 0.00 0.00 0.00 4.02
2320 2408 2.526432 TGTACCAAGAGGAGACCACTC 58.474 52.381 0.00 0.00 41.94 3.51
2339 2427 1.089481 ATGCACCGTCGCCAAGTATG 61.089 55.000 0.00 0.00 0.00 2.39
2406 3369 2.028476 TGCAACCACTAACGCTGATAGT 60.028 45.455 0.00 0.00 33.96 2.12
2408 3371 2.753055 TGCAACCACTAACGCTGATA 57.247 45.000 0.00 0.00 0.00 2.15
2409 3372 1.890876 TTGCAACCACTAACGCTGAT 58.109 45.000 0.00 0.00 0.00 2.90
2410 3373 1.669604 TTTGCAACCACTAACGCTGA 58.330 45.000 0.00 0.00 0.00 4.26
2411 3374 2.483583 TTTTGCAACCACTAACGCTG 57.516 45.000 0.00 0.00 0.00 5.18
2463 3426 1.065928 CGTGCCGATCTACCTGGAC 59.934 63.158 0.00 0.00 0.00 4.02
2497 3460 4.789802 GCTCCAAACTAGTGCAACAAGTTC 60.790 45.833 9.32 0.00 41.43 3.01
2516 3479 1.556911 TCCTTGATCCTGAACAGCTCC 59.443 52.381 0.00 0.00 0.00 4.70
2548 3511 2.027192 TCCAATTCAAAGACCTCCCTCG 60.027 50.000 0.00 0.00 0.00 4.63
2552 3515 4.398319 TCTTGTCCAATTCAAAGACCTCC 58.602 43.478 0.00 0.00 0.00 4.30
2772 3735 0.964358 CCCTTGAGCCCAGCAAGAAG 60.964 60.000 0.00 0.00 44.16 2.85
2786 3749 1.341080 ACTGGCCATTCAAACCCTTG 58.659 50.000 5.51 0.00 0.00 3.61
2795 3758 1.620822 ACAACTCCAACTGGCCATTC 58.379 50.000 5.51 0.00 34.44 2.67
2813 3776 6.040247 TCAAGATCATCCACATTGTACGTAC 58.960 40.000 18.90 18.90 0.00 3.67
2814 3777 6.096282 TCTCAAGATCATCCACATTGTACGTA 59.904 38.462 0.00 0.00 0.00 3.57
2815 3778 5.084818 TCAAGATCATCCACATTGTACGT 57.915 39.130 0.00 0.00 0.00 3.57
2816 3779 5.233050 GTCTCAAGATCATCCACATTGTACG 59.767 44.000 0.00 0.00 0.00 3.67
2917 4134 0.517316 GCTCCACACCAAACGTGATC 59.483 55.000 0.00 0.00 46.20 2.92
2918 4135 0.108585 AGCTCCACACCAAACGTGAT 59.891 50.000 0.00 0.00 46.20 3.06
2919 4136 0.753867 TAGCTCCACACCAAACGTGA 59.246 50.000 0.00 0.00 46.20 4.35
2921 4138 2.300723 TGTATAGCTCCACACCAAACGT 59.699 45.455 0.00 0.00 0.00 3.99
2922 4139 2.967362 TGTATAGCTCCACACCAAACG 58.033 47.619 0.00 0.00 0.00 3.60
2923 4140 6.113411 AGTTATGTATAGCTCCACACCAAAC 58.887 40.000 2.62 7.85 0.00 2.93
2924 4141 6.308015 AGTTATGTATAGCTCCACACCAAA 57.692 37.500 2.62 0.00 0.00 3.28
2970 4189 1.086067 CCGAGTGATGCAGTTGCGAT 61.086 55.000 0.00 0.00 45.83 4.58
2972 4191 2.780643 CCGAGTGATGCAGTTGCG 59.219 61.111 0.00 0.00 45.83 4.85
3015 4234 3.181480 TGCTTGCCAGTAAAAGACCAAAC 60.181 43.478 0.00 0.00 0.00 2.93
3053 4272 2.666317 ACCTGGGAAAACTGTTCCTTG 58.334 47.619 0.00 0.00 38.61 3.61
3103 4322 5.011227 TGCCACGGTAGAGCAACAATATATA 59.989 40.000 0.00 0.00 32.56 0.86
3104 4323 4.202315 TGCCACGGTAGAGCAACAATATAT 60.202 41.667 0.00 0.00 32.56 0.86
3105 4324 3.133183 TGCCACGGTAGAGCAACAATATA 59.867 43.478 0.00 0.00 32.56 0.86
3106 4325 2.093181 TGCCACGGTAGAGCAACAATAT 60.093 45.455 0.00 0.00 32.56 1.28
3119 4338 3.513225 GCATAGCATTGCCACGGT 58.487 55.556 4.70 0.00 36.60 4.83
3272 4492 5.664457 TGTATGGTCTGAATCAGCTACTTG 58.336 41.667 5.18 0.00 0.00 3.16
3356 4587 1.606601 TGACCTCCACTCCACCTCG 60.607 63.158 0.00 0.00 0.00 4.63
3508 5050 1.233019 CTGCACTCAGTCAGGTTTGG 58.767 55.000 0.00 0.00 35.61 3.28
3509 5051 0.590195 GCTGCACTCAGTCAGGTTTG 59.410 55.000 0.00 0.00 42.29 2.93
3510 5052 0.471617 AGCTGCACTCAGTCAGGTTT 59.528 50.000 1.02 0.00 42.29 3.27
3511 5053 0.471617 AAGCTGCACTCAGTCAGGTT 59.528 50.000 12.96 12.96 43.59 3.50
3553 5103 8.698210 ACCAATTCAAGCACAACAATCATATAT 58.302 29.630 0.00 0.00 0.00 0.86
3554 5104 8.065473 ACCAATTCAAGCACAACAATCATATA 57.935 30.769 0.00 0.00 0.00 0.86
3555 5105 6.938507 ACCAATTCAAGCACAACAATCATAT 58.061 32.000 0.00 0.00 0.00 1.78
3556 5106 6.343716 ACCAATTCAAGCACAACAATCATA 57.656 33.333 0.00 0.00 0.00 2.15
3599 5149 0.457337 GCAGCTACCACAATGCTTGC 60.457 55.000 0.00 0.00 35.78 4.01
3600 5150 1.135489 CAGCAGCTACCACAATGCTTG 60.135 52.381 0.00 0.00 46.46 4.01
3601 5151 1.171308 CAGCAGCTACCACAATGCTT 58.829 50.000 0.00 0.00 46.46 3.91
3606 5156 1.348064 ACTACCAGCAGCTACCACAA 58.652 50.000 0.00 0.00 0.00 3.33
3636 5186 0.697658 TGGGTGCTCATCCATTGTCA 59.302 50.000 0.00 0.00 36.49 3.58
3640 5190 2.905415 TCTTTGGGTGCTCATCCATT 57.095 45.000 2.25 0.00 42.06 3.16
3642 5192 2.517959 CTTTCTTTGGGTGCTCATCCA 58.482 47.619 0.00 0.00 40.49 3.41
3755 5319 9.050601 GTAGCTGCATTTTCTATTACTGAATCT 57.949 33.333 1.02 0.00 0.00 2.40
3782 5346 4.559862 AGTGTGAAGGAAGGAACCATAG 57.440 45.455 0.00 0.00 0.00 2.23
3805 5400 5.337089 GGGGAACAGGAGTTAGTACAGTTAC 60.337 48.000 0.00 0.00 38.30 2.50
3822 5417 3.948719 GGCCGTGAGTGGGGAACA 61.949 66.667 0.00 0.00 0.00 3.18
3852 5447 8.750298 GCCATCGCCATAGGTAGTTATATATAT 58.250 37.037 0.00 0.00 0.00 0.86
3859 5454 2.321719 TGCCATCGCCATAGGTAGTTA 58.678 47.619 0.00 0.00 0.00 2.24
3860 5455 1.128200 TGCCATCGCCATAGGTAGTT 58.872 50.000 0.00 0.00 0.00 2.24
3861 5456 1.002430 CATGCCATCGCCATAGGTAGT 59.998 52.381 0.00 0.00 0.00 2.73
3862 5457 1.002430 ACATGCCATCGCCATAGGTAG 59.998 52.381 0.00 0.00 0.00 3.18
3863 5458 1.001974 GACATGCCATCGCCATAGGTA 59.998 52.381 0.00 0.00 0.00 3.08
3864 5459 0.250467 GACATGCCATCGCCATAGGT 60.250 55.000 0.00 0.00 0.00 3.08
3865 5460 0.035881 AGACATGCCATCGCCATAGG 59.964 55.000 0.00 0.00 0.00 2.57
3866 5461 1.888215 AAGACATGCCATCGCCATAG 58.112 50.000 0.00 0.00 0.00 2.23
3867 5462 1.948834 CAAAGACATGCCATCGCCATA 59.051 47.619 0.00 0.00 0.00 2.74
3868 5463 0.742505 CAAAGACATGCCATCGCCAT 59.257 50.000 0.00 0.00 0.00 4.40
3869 5464 1.936436 GCAAAGACATGCCATCGCCA 61.936 55.000 0.00 0.00 40.49 5.69
3870 5465 1.226773 GCAAAGACATGCCATCGCC 60.227 57.895 0.00 0.00 40.49 5.54
3875 5470 2.153645 CTACACTGCAAAGACATGCCA 58.846 47.619 0.00 0.00 45.83 4.92
3877 5472 4.409570 CAATCTACACTGCAAAGACATGC 58.590 43.478 0.00 0.00 46.58 4.06
3889 5484 1.282157 GGGGTCTTGGCAATCTACACT 59.718 52.381 0.00 0.00 0.00 3.55
3891 5486 1.004277 GTGGGGTCTTGGCAATCTACA 59.996 52.381 0.00 0.00 0.00 2.74
3894 5489 1.002134 CGTGGGGTCTTGGCAATCT 60.002 57.895 0.00 0.00 0.00 2.40
3895 5490 2.700773 GCGTGGGGTCTTGGCAATC 61.701 63.158 0.00 0.00 0.00 2.67
3896 5491 2.676471 GCGTGGGGTCTTGGCAAT 60.676 61.111 0.00 0.00 0.00 3.56
3909 5541 1.279527 TTCGTCGTAGCCAAAGCGTG 61.280 55.000 0.00 0.00 46.67 5.34
3910 5542 0.598158 TTTCGTCGTAGCCAAAGCGT 60.598 50.000 0.00 0.00 46.67 5.07
3924 5556 2.230508 TGTCTATGCCGAGTTCTTTCGT 59.769 45.455 0.00 0.00 38.88 3.85
3987 5665 2.489619 GGAGGGATGGATAAAGCATGCA 60.490 50.000 21.98 0.00 39.56 3.96
3988 5666 2.165998 GGAGGGATGGATAAAGCATGC 58.834 52.381 10.51 10.51 0.00 4.06
3989 5667 3.152341 GTGGAGGGATGGATAAAGCATG 58.848 50.000 0.00 0.00 0.00 4.06
3990 5668 3.059097 AGTGGAGGGATGGATAAAGCAT 58.941 45.455 0.00 0.00 0.00 3.79
4015 5693 2.675889 CGTTCCTTGGTGGCTACGTAAT 60.676 50.000 0.00 0.00 38.16 1.89
4090 5772 6.780522 AGGAATAAAGTAGTTCCCTGCAAAAA 59.219 34.615 0.79 0.00 43.94 1.94
4091 5773 6.311735 AGGAATAAAGTAGTTCCCTGCAAAA 58.688 36.000 0.79 0.00 43.94 2.44
4092 5774 5.887754 AGGAATAAAGTAGTTCCCTGCAAA 58.112 37.500 0.79 0.00 43.94 3.68
4093 5775 5.514500 AGGAATAAAGTAGTTCCCTGCAA 57.486 39.130 0.79 0.00 43.94 4.08
4094 5776 5.253330 CAAGGAATAAAGTAGTTCCCTGCA 58.747 41.667 0.79 0.00 43.94 4.41
4095 5777 4.640647 CCAAGGAATAAAGTAGTTCCCTGC 59.359 45.833 0.79 0.00 43.94 4.85
4096 5778 5.648092 CACCAAGGAATAAAGTAGTTCCCTG 59.352 44.000 0.00 0.00 43.94 4.45
4097 5779 5.550403 TCACCAAGGAATAAAGTAGTTCCCT 59.450 40.000 0.00 0.00 43.94 4.20
4098 5780 5.812286 TCACCAAGGAATAAAGTAGTTCCC 58.188 41.667 0.00 0.00 43.94 3.97
4099 5781 7.575155 GCTTTCACCAAGGAATAAAGTAGTTCC 60.575 40.741 0.00 0.00 43.36 3.62
4100 5782 7.175119 AGCTTTCACCAAGGAATAAAGTAGTTC 59.825 37.037 0.00 0.00 32.37 3.01
4101 5783 7.004691 AGCTTTCACCAAGGAATAAAGTAGTT 58.995 34.615 0.00 0.00 32.37 2.24
4102 5784 6.431234 CAGCTTTCACCAAGGAATAAAGTAGT 59.569 38.462 0.00 0.00 32.37 2.73
4103 5785 6.623767 GCAGCTTTCACCAAGGAATAAAGTAG 60.624 42.308 0.00 0.00 32.37 2.57
4104 5786 5.183140 GCAGCTTTCACCAAGGAATAAAGTA 59.817 40.000 0.00 0.00 32.37 2.24
4105 5787 4.021981 GCAGCTTTCACCAAGGAATAAAGT 60.022 41.667 0.00 0.00 32.37 2.66
4106 5788 4.219288 AGCAGCTTTCACCAAGGAATAAAG 59.781 41.667 0.00 1.26 32.37 1.85
4107 5789 4.022068 CAGCAGCTTTCACCAAGGAATAAA 60.022 41.667 0.00 0.00 32.37 1.40
4117 5799 0.038801 GAAAGGCAGCAGCTTTCACC 60.039 55.000 15.54 0.00 39.36 4.02
4132 5829 8.524487 AGTAATCAGTAGTAGTGTGAAGGAAAG 58.476 37.037 4.90 0.00 0.00 2.62
4261 5993 0.526211 TGACGACCTGGACGATTGAG 59.474 55.000 24.26 0.00 34.70 3.02
4262 5994 0.526211 CTGACGACCTGGACGATTGA 59.474 55.000 24.26 4.82 34.70 2.57
4263 5995 0.243907 ACTGACGACCTGGACGATTG 59.756 55.000 24.26 14.48 34.70 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.