Multiple sequence alignment - TraesCS6D01G397800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G397800 chr6D 100.000 3168 0 0 1 3168 469393718 469390551 0.000000e+00 5851.0
1 TraesCS6D01G397800 chr6B 86.672 1343 78 37 1324 2620 715629376 715628089 0.000000e+00 1395.0
2 TraesCS6D01G397800 chr6B 89.255 577 27 20 2621 3166 715627075 715626503 0.000000e+00 689.0
3 TraesCS6D01G397800 chr6B 81.713 607 42 23 605 1186 715630118 715629556 2.900000e-120 442.0
4 TraesCS6D01G397800 chr6A 89.256 847 51 22 1804 2619 614521211 614520374 0.000000e+00 1024.0
5 TraesCS6D01G397800 chr6A 86.271 590 35 26 2621 3167 614519538 614518952 1.630000e-167 599.0
6 TraesCS6D01G397800 chr6A 79.692 650 87 37 608 1239 614522170 614521548 8.120000e-116 427.0
7 TraesCS6D01G397800 chr6A 78.095 315 36 21 1316 1615 614521523 614521227 5.430000e-38 169.0
8 TraesCS6D01G397800 chr6A 90.164 122 11 1 2049 2169 614502754 614502633 1.180000e-34 158.0
9 TraesCS6D01G397800 chr1D 95.862 145 5 1 122 266 174111213 174111356 1.900000e-57 233.0
10 TraesCS6D01G397800 chr2A 92.903 155 10 1 114 268 759537648 759537801 1.140000e-54 224.0
11 TraesCS6D01G397800 chr2A 86.772 189 25 0 1979 2167 3971993 3972181 8.900000e-51 211.0
12 TraesCS6D01G397800 chr1A 93.878 147 8 1 122 267 375095106 375094960 1.480000e-53 220.0
13 TraesCS6D01G397800 chr1B 93.151 146 9 1 122 267 7701991 7701847 2.480000e-51 213.0
14 TraesCS6D01G397800 chr2B 87.709 179 22 0 1991 2169 6167158 6166980 3.200000e-50 209.0
15 TraesCS6D01G397800 chr2B 93.056 144 9 1 124 267 410944365 410944223 3.200000e-50 209.0
16 TraesCS6D01G397800 chr2B 91.096 146 12 1 122 267 557395328 557395184 2.490000e-46 196.0
17 TraesCS6D01G397800 chr7B 92.308 130 9 1 118 247 248509689 248509561 1.940000e-42 183.0
18 TraesCS6D01G397800 chr7B 89.041 146 13 3 122 267 484890346 484890488 9.030000e-41 178.0
19 TraesCS6D01G397800 chrUn 88.276 145 16 1 119 263 302944708 302944565 4.200000e-39 172.0
20 TraesCS6D01G397800 chr3A 92.308 39 3 0 2941 2979 131748778 131748740 4.410000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G397800 chr6D 469390551 469393718 3167 True 5851.00 5851 100.0000 1 3168 1 chr6D.!!$R1 3167
1 TraesCS6D01G397800 chr6B 715626503 715630118 3615 True 842.00 1395 85.8800 605 3166 3 chr6B.!!$R1 2561
2 TraesCS6D01G397800 chr6A 614518952 614522170 3218 True 554.75 1024 83.3285 608 3167 4 chr6A.!!$R2 2559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
552 553 0.038166 ACCAATGTCGCTTGTGGGAT 59.962 50.0 0.0 0.0 37.48 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2188 2351 0.034186 TTAGCCCACCTTGCATGAGG 60.034 55.0 2.71 2.71 42.75 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.783042 TCTTGTAAATTAGGAGAGTAGCTTCC 58.217 38.462 0.00 0.00 0.00 3.46
27 28 7.399191 TCTTGTAAATTAGGAGAGTAGCTTCCA 59.601 37.037 5.00 0.00 0.00 3.53
28 29 7.113658 TGTAAATTAGGAGAGTAGCTTCCAG 57.886 40.000 5.00 0.00 0.00 3.86
29 30 6.668283 TGTAAATTAGGAGAGTAGCTTCCAGT 59.332 38.462 5.00 0.00 0.00 4.00
30 31 5.606348 AATTAGGAGAGTAGCTTCCAGTG 57.394 43.478 5.00 0.00 0.00 3.66
31 32 2.614134 AGGAGAGTAGCTTCCAGTGT 57.386 50.000 5.00 0.00 0.00 3.55
32 33 3.741245 AGGAGAGTAGCTTCCAGTGTA 57.259 47.619 5.00 0.00 0.00 2.90
33 34 3.626930 AGGAGAGTAGCTTCCAGTGTAG 58.373 50.000 5.00 0.00 0.00 2.74
34 35 3.010808 AGGAGAGTAGCTTCCAGTGTAGT 59.989 47.826 5.00 0.00 0.00 2.73
35 36 3.129638 GGAGAGTAGCTTCCAGTGTAGTG 59.870 52.174 0.00 0.00 0.00 2.74
36 37 4.011023 GAGAGTAGCTTCCAGTGTAGTGA 58.989 47.826 0.00 0.00 0.00 3.41
37 38 4.013728 AGAGTAGCTTCCAGTGTAGTGAG 58.986 47.826 0.00 0.00 0.00 3.51
38 39 2.494073 AGTAGCTTCCAGTGTAGTGAGC 59.506 50.000 0.00 0.00 0.00 4.26
39 40 1.638529 AGCTTCCAGTGTAGTGAGCT 58.361 50.000 0.00 0.00 0.00 4.09
40 41 2.808919 AGCTTCCAGTGTAGTGAGCTA 58.191 47.619 0.00 0.00 0.00 3.32
41 42 2.757868 AGCTTCCAGTGTAGTGAGCTAG 59.242 50.000 0.00 0.00 0.00 3.42
42 43 2.494073 GCTTCCAGTGTAGTGAGCTAGT 59.506 50.000 0.00 0.00 0.00 2.57
43 44 3.674682 GCTTCCAGTGTAGTGAGCTAGTG 60.675 52.174 0.00 0.00 0.00 2.74
44 45 2.447443 TCCAGTGTAGTGAGCTAGTGG 58.553 52.381 0.00 0.00 0.00 4.00
45 46 1.134965 CCAGTGTAGTGAGCTAGTGGC 60.135 57.143 0.00 0.00 42.19 5.01
59 60 5.024785 GCTAGTGGCTAATGGAAGTAAGT 57.975 43.478 0.00 0.00 38.06 2.24
60 61 4.811557 GCTAGTGGCTAATGGAAGTAAGTG 59.188 45.833 0.00 0.00 38.06 3.16
61 62 4.910458 AGTGGCTAATGGAAGTAAGTGT 57.090 40.909 0.00 0.00 0.00 3.55
62 63 4.579869 AGTGGCTAATGGAAGTAAGTGTG 58.420 43.478 0.00 0.00 0.00 3.82
63 64 3.689649 GTGGCTAATGGAAGTAAGTGTGG 59.310 47.826 0.00 0.00 0.00 4.17
64 65 2.683362 GGCTAATGGAAGTAAGTGTGGC 59.317 50.000 0.00 0.00 0.00 5.01
65 66 3.343617 GCTAATGGAAGTAAGTGTGGCA 58.656 45.455 0.00 0.00 0.00 4.92
66 67 3.375299 GCTAATGGAAGTAAGTGTGGCAG 59.625 47.826 0.00 0.00 0.00 4.85
67 68 2.496899 ATGGAAGTAAGTGTGGCAGG 57.503 50.000 0.00 0.00 0.00 4.85
68 69 1.136828 TGGAAGTAAGTGTGGCAGGT 58.863 50.000 0.00 0.00 0.00 4.00
69 70 1.202758 TGGAAGTAAGTGTGGCAGGTG 60.203 52.381 0.00 0.00 0.00 4.00
70 71 1.202770 GGAAGTAAGTGTGGCAGGTGT 60.203 52.381 0.00 0.00 0.00 4.16
71 72 2.038033 GGAAGTAAGTGTGGCAGGTGTA 59.962 50.000 0.00 0.00 0.00 2.90
72 73 3.495453 GGAAGTAAGTGTGGCAGGTGTAA 60.495 47.826 0.00 0.00 0.00 2.41
73 74 3.849563 AGTAAGTGTGGCAGGTGTAAA 57.150 42.857 0.00 0.00 0.00 2.01
74 75 3.740115 AGTAAGTGTGGCAGGTGTAAAG 58.260 45.455 0.00 0.00 0.00 1.85
75 76 1.981256 AAGTGTGGCAGGTGTAAAGG 58.019 50.000 0.00 0.00 0.00 3.11
76 77 0.537371 AGTGTGGCAGGTGTAAAGGC 60.537 55.000 0.00 0.00 0.00 4.35
77 78 0.821711 GTGTGGCAGGTGTAAAGGCA 60.822 55.000 0.00 0.00 35.32 4.75
78 79 4.492604 TGGCAGGTGTAAAGGCAC 57.507 55.556 0.00 0.00 38.56 5.01
96 97 3.565516 GCACTTACTTGCCTTAGTTTGC 58.434 45.455 0.00 0.00 36.42 3.68
97 98 3.611766 GCACTTACTTGCCTTAGTTTGCC 60.612 47.826 0.00 0.00 36.42 4.52
98 99 3.568007 CACTTACTTGCCTTAGTTTGCCA 59.432 43.478 0.00 0.00 0.00 4.92
99 100 4.218417 CACTTACTTGCCTTAGTTTGCCAT 59.782 41.667 0.00 0.00 0.00 4.40
100 101 4.218417 ACTTACTTGCCTTAGTTTGCCATG 59.782 41.667 0.00 0.00 0.00 3.66
101 102 1.273327 ACTTGCCTTAGTTTGCCATGC 59.727 47.619 0.00 0.00 0.00 4.06
102 103 0.607620 TTGCCTTAGTTTGCCATGCC 59.392 50.000 0.00 0.00 0.00 4.40
103 104 0.541530 TGCCTTAGTTTGCCATGCCA 60.542 50.000 0.00 0.00 0.00 4.92
104 105 0.108662 GCCTTAGTTTGCCATGCCAC 60.109 55.000 0.00 0.00 0.00 5.01
105 106 1.549203 CCTTAGTTTGCCATGCCACT 58.451 50.000 0.00 0.00 0.00 4.00
106 107 1.474077 CCTTAGTTTGCCATGCCACTC 59.526 52.381 0.00 0.00 0.00 3.51
107 108 2.440409 CTTAGTTTGCCATGCCACTCT 58.560 47.619 0.00 0.00 0.00 3.24
108 109 3.609853 CTTAGTTTGCCATGCCACTCTA 58.390 45.455 0.00 0.00 0.00 2.43
109 110 2.814805 AGTTTGCCATGCCACTCTAT 57.185 45.000 0.00 0.00 0.00 1.98
110 111 3.091633 AGTTTGCCATGCCACTCTATT 57.908 42.857 0.00 0.00 0.00 1.73
111 112 3.434309 AGTTTGCCATGCCACTCTATTT 58.566 40.909 0.00 0.00 0.00 1.40
112 113 3.834231 AGTTTGCCATGCCACTCTATTTT 59.166 39.130 0.00 0.00 0.00 1.82
113 114 4.284234 AGTTTGCCATGCCACTCTATTTTT 59.716 37.500 0.00 0.00 0.00 1.94
114 115 3.872511 TGCCATGCCACTCTATTTTTG 57.127 42.857 0.00 0.00 0.00 2.44
115 116 3.429492 TGCCATGCCACTCTATTTTTGA 58.571 40.909 0.00 0.00 0.00 2.69
116 117 3.444742 TGCCATGCCACTCTATTTTTGAG 59.555 43.478 0.00 0.00 37.55 3.02
117 118 3.696051 GCCATGCCACTCTATTTTTGAGA 59.304 43.478 0.00 0.00 35.66 3.27
118 119 4.201990 GCCATGCCACTCTATTTTTGAGAG 60.202 45.833 0.00 0.00 45.08 3.20
119 120 5.188434 CCATGCCACTCTATTTTTGAGAGA 58.812 41.667 6.67 0.00 42.69 3.10
120 121 5.826737 CCATGCCACTCTATTTTTGAGAGAT 59.173 40.000 6.67 0.00 42.69 2.75
121 122 6.320672 CCATGCCACTCTATTTTTGAGAGATT 59.679 38.462 6.67 0.00 42.69 2.40
122 123 7.147949 CCATGCCACTCTATTTTTGAGAGATTT 60.148 37.037 6.67 0.00 42.69 2.17
123 124 8.896744 CATGCCACTCTATTTTTGAGAGATTTA 58.103 33.333 6.67 0.00 42.69 1.40
124 125 8.498054 TGCCACTCTATTTTTGAGAGATTTAG 57.502 34.615 6.67 0.00 42.69 1.85
125 126 7.554118 TGCCACTCTATTTTTGAGAGATTTAGG 59.446 37.037 6.67 2.39 42.69 2.69
126 127 7.012799 GCCACTCTATTTTTGAGAGATTTAGGG 59.987 40.741 6.67 0.00 42.69 3.53
127 128 8.267894 CCACTCTATTTTTGAGAGATTTAGGGA 58.732 37.037 6.67 0.00 42.69 4.20
128 129 9.323985 CACTCTATTTTTGAGAGATTTAGGGAG 57.676 37.037 6.67 0.00 42.69 4.30
129 130 9.052365 ACTCTATTTTTGAGAGATTTAGGGAGT 57.948 33.333 6.67 0.00 42.69 3.85
130 131 9.323985 CTCTATTTTTGAGAGATTTAGGGAGTG 57.676 37.037 0.00 0.00 42.69 3.51
131 132 8.826765 TCTATTTTTGAGAGATTTAGGGAGTGT 58.173 33.333 0.00 0.00 0.00 3.55
132 133 9.454859 CTATTTTTGAGAGATTTAGGGAGTGTT 57.545 33.333 0.00 0.00 0.00 3.32
133 134 7.510549 TTTTTGAGAGATTTAGGGAGTGTTG 57.489 36.000 0.00 0.00 0.00 3.33
134 135 4.826274 TGAGAGATTTAGGGAGTGTTGG 57.174 45.455 0.00 0.00 0.00 3.77
135 136 3.519510 TGAGAGATTTAGGGAGTGTTGGG 59.480 47.826 0.00 0.00 0.00 4.12
136 137 3.775316 GAGAGATTTAGGGAGTGTTGGGA 59.225 47.826 0.00 0.00 0.00 4.37
137 138 3.777522 AGAGATTTAGGGAGTGTTGGGAG 59.222 47.826 0.00 0.00 0.00 4.30
138 139 3.519913 GAGATTTAGGGAGTGTTGGGAGT 59.480 47.826 0.00 0.00 0.00 3.85
139 140 3.519913 AGATTTAGGGAGTGTTGGGAGTC 59.480 47.826 0.00 0.00 0.00 3.36
140 141 1.652947 TTAGGGAGTGTTGGGAGTCC 58.347 55.000 0.00 0.00 34.99 3.85
141 142 3.078817 GGGAGTGTTGGGAGTCCC 58.921 66.667 22.54 22.54 46.36 4.46
142 143 4.234673 GGAGTGTTGGGAGTCCCT 57.765 61.111 28.73 8.32 45.70 4.20
143 144 1.984020 GGAGTGTTGGGAGTCCCTC 59.016 63.158 28.73 20.65 45.70 4.30
152 153 2.359404 GAGTCCCTCCACTCCCGA 59.641 66.667 0.00 0.00 37.43 5.14
153 154 1.075896 GAGTCCCTCCACTCCCGAT 60.076 63.158 0.00 0.00 37.43 4.18
154 155 0.688087 GAGTCCCTCCACTCCCGATT 60.688 60.000 0.00 0.00 37.43 3.34
155 156 0.688087 AGTCCCTCCACTCCCGATTC 60.688 60.000 0.00 0.00 0.00 2.52
156 157 1.382695 TCCCTCCACTCCCGATTCC 60.383 63.158 0.00 0.00 0.00 3.01
157 158 2.797278 CCCTCCACTCCCGATTCCG 61.797 68.421 0.00 0.00 0.00 4.30
158 159 2.107141 CTCCACTCCCGATTCCGC 59.893 66.667 0.00 0.00 0.00 5.54
159 160 2.363795 TCCACTCCCGATTCCGCT 60.364 61.111 0.00 0.00 0.00 5.52
160 161 2.107141 CCACTCCCGATTCCGCTC 59.893 66.667 0.00 0.00 0.00 5.03
161 162 2.278857 CACTCCCGATTCCGCTCG 60.279 66.667 0.00 0.00 38.37 5.03
162 163 4.208686 ACTCCCGATTCCGCTCGC 62.209 66.667 0.00 0.00 37.33 5.03
211 212 0.099436 CGGAGCTGCAAAATAGGTGC 59.901 55.000 5.91 0.00 42.55 5.01
212 213 1.467920 GGAGCTGCAAAATAGGTGCT 58.532 50.000 0.00 0.00 42.69 4.40
213 214 1.403323 GGAGCTGCAAAATAGGTGCTC 59.597 52.381 10.85 10.85 44.08 4.26
214 215 1.403323 GAGCTGCAAAATAGGTGCTCC 59.597 52.381 8.67 0.00 42.69 4.70
215 216 0.099436 GCTGCAAAATAGGTGCTCCG 59.901 55.000 0.00 0.00 42.69 4.63
216 217 0.099436 CTGCAAAATAGGTGCTCCGC 59.901 55.000 0.00 0.00 42.69 5.54
217 218 0.607762 TGCAAAATAGGTGCTCCGCA 60.608 50.000 0.00 0.00 42.69 5.69
218 219 0.099436 GCAAAATAGGTGCTCCGCAG 59.901 55.000 0.00 0.00 40.08 5.18
219 220 1.737838 CAAAATAGGTGCTCCGCAGA 58.262 50.000 0.00 0.00 40.08 4.26
220 221 2.292267 CAAAATAGGTGCTCCGCAGAT 58.708 47.619 0.00 0.00 40.08 2.90
221 222 2.246719 AAATAGGTGCTCCGCAGATC 57.753 50.000 0.00 0.00 40.08 2.75
222 223 0.394565 AATAGGTGCTCCGCAGATCC 59.605 55.000 0.00 0.00 40.08 3.36
223 224 1.476007 ATAGGTGCTCCGCAGATCCC 61.476 60.000 0.00 0.00 40.08 3.85
224 225 2.589610 TAGGTGCTCCGCAGATCCCT 62.590 60.000 0.00 2.07 40.08 4.20
225 226 2.202987 GTGCTCCGCAGATCCCTG 60.203 66.667 0.00 0.00 40.08 4.45
226 227 2.685017 TGCTCCGCAGATCCCTGT 60.685 61.111 0.00 0.00 42.35 4.00
227 228 1.381191 TGCTCCGCAGATCCCTGTA 60.381 57.895 0.00 0.00 42.35 2.74
228 229 0.975556 TGCTCCGCAGATCCCTGTAA 60.976 55.000 0.00 0.00 42.35 2.41
229 230 0.394565 GCTCCGCAGATCCCTGTAAT 59.605 55.000 0.00 0.00 42.35 1.89
230 231 1.202698 GCTCCGCAGATCCCTGTAATT 60.203 52.381 0.00 0.00 42.35 1.40
231 232 2.746472 GCTCCGCAGATCCCTGTAATTT 60.746 50.000 0.00 0.00 42.35 1.82
232 233 3.134458 CTCCGCAGATCCCTGTAATTTC 58.866 50.000 0.00 0.00 42.35 2.17
233 234 1.867233 CCGCAGATCCCTGTAATTTCG 59.133 52.381 0.00 0.00 42.35 3.46
234 235 1.261619 CGCAGATCCCTGTAATTTCGC 59.738 52.381 0.00 0.00 42.35 4.70
235 236 1.261619 GCAGATCCCTGTAATTTCGCG 59.738 52.381 0.00 0.00 42.35 5.87
236 237 1.867233 CAGATCCCTGTAATTTCGCGG 59.133 52.381 6.13 0.00 35.70 6.46
237 238 1.760613 AGATCCCTGTAATTTCGCGGA 59.239 47.619 6.13 0.00 0.00 5.54
238 239 2.135933 GATCCCTGTAATTTCGCGGAG 58.864 52.381 6.13 0.00 0.00 4.63
251 252 2.108362 CGGAGCCGGGTGGATAAC 59.892 66.667 12.94 0.00 37.49 1.89
260 261 2.776659 GGTGGATAACCGAACAGGC 58.223 57.895 0.00 0.00 46.52 4.85
261 262 0.746923 GGTGGATAACCGAACAGGCC 60.747 60.000 0.00 0.00 46.52 5.19
262 263 0.746923 GTGGATAACCGAACAGGCCC 60.747 60.000 0.00 0.00 46.52 5.80
263 264 0.912487 TGGATAACCGAACAGGCCCT 60.912 55.000 0.00 0.00 46.52 5.19
264 265 0.255033 GGATAACCGAACAGGCCCTT 59.745 55.000 0.00 0.00 46.52 3.95
265 266 1.487558 GGATAACCGAACAGGCCCTTA 59.512 52.381 0.00 0.00 46.52 2.69
266 267 2.484947 GGATAACCGAACAGGCCCTTAG 60.485 54.545 0.00 0.00 46.52 2.18
267 268 1.941377 TAACCGAACAGGCCCTTAGA 58.059 50.000 0.00 0.00 46.52 2.10
268 269 0.613777 AACCGAACAGGCCCTTAGAG 59.386 55.000 0.00 0.00 46.52 2.43
269 270 0.252103 ACCGAACAGGCCCTTAGAGA 60.252 55.000 0.00 0.00 46.52 3.10
270 271 0.902531 CCGAACAGGCCCTTAGAGAA 59.097 55.000 0.00 0.00 0.00 2.87
271 272 1.405661 CCGAACAGGCCCTTAGAGAAC 60.406 57.143 0.00 0.00 0.00 3.01
272 273 1.275291 CGAACAGGCCCTTAGAGAACA 59.725 52.381 0.00 0.00 0.00 3.18
273 274 2.093447 CGAACAGGCCCTTAGAGAACAT 60.093 50.000 0.00 0.00 0.00 2.71
274 275 3.619979 CGAACAGGCCCTTAGAGAACATT 60.620 47.826 0.00 0.00 0.00 2.71
275 276 4.336280 GAACAGGCCCTTAGAGAACATTT 58.664 43.478 0.00 0.00 0.00 2.32
276 277 3.690460 ACAGGCCCTTAGAGAACATTTG 58.310 45.455 0.00 0.00 0.00 2.32
277 278 3.074538 ACAGGCCCTTAGAGAACATTTGT 59.925 43.478 0.00 0.00 0.00 2.83
278 279 3.691609 CAGGCCCTTAGAGAACATTTGTC 59.308 47.826 0.00 0.00 0.00 3.18
279 280 3.330701 AGGCCCTTAGAGAACATTTGTCA 59.669 43.478 0.00 0.00 0.00 3.58
280 281 4.079253 GGCCCTTAGAGAACATTTGTCAA 58.921 43.478 0.00 0.00 0.00 3.18
281 282 4.082733 GGCCCTTAGAGAACATTTGTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
282 283 4.762251 GCCCTTAGAGAACATTTGTCAACT 59.238 41.667 0.00 0.00 0.00 3.16
283 284 5.241728 GCCCTTAGAGAACATTTGTCAACTT 59.758 40.000 0.00 0.00 0.00 2.66
284 285 6.239036 GCCCTTAGAGAACATTTGTCAACTTT 60.239 38.462 0.00 0.00 0.00 2.66
285 286 7.684428 GCCCTTAGAGAACATTTGTCAACTTTT 60.684 37.037 0.00 0.00 0.00 2.27
286 287 8.846211 CCCTTAGAGAACATTTGTCAACTTTTA 58.154 33.333 0.00 0.00 0.00 1.52
287 288 9.665264 CCTTAGAGAACATTTGTCAACTTTTAC 57.335 33.333 0.00 0.00 0.00 2.01
291 292 8.956426 AGAGAACATTTGTCAACTTTTACAAGA 58.044 29.630 0.00 0.00 36.96 3.02
292 293 9.736023 GAGAACATTTGTCAACTTTTACAAGAT 57.264 29.630 0.00 0.00 36.96 2.40
314 315 9.730705 AAGATACATATGTCTACAATCCAATGG 57.269 33.333 12.68 0.00 0.00 3.16
315 316 9.104713 AGATACATATGTCTACAATCCAATGGA 57.895 33.333 12.68 3.67 35.55 3.41
316 317 9.376075 GATACATATGTCTACAATCCAATGGAG 57.624 37.037 12.68 0.00 34.05 3.86
317 318 7.141758 ACATATGTCTACAATCCAATGGAGT 57.858 36.000 8.40 1.07 34.05 3.85
318 319 7.577303 ACATATGTCTACAATCCAATGGAGTT 58.423 34.615 8.40 0.00 34.05 3.01
319 320 8.055181 ACATATGTCTACAATCCAATGGAGTTT 58.945 33.333 8.40 0.00 34.05 2.66
320 321 6.764308 ATGTCTACAATCCAATGGAGTTTG 57.236 37.500 8.40 10.92 34.05 2.93
321 322 5.630121 TGTCTACAATCCAATGGAGTTTGT 58.370 37.500 20.84 20.84 38.18 2.83
322 323 6.068010 TGTCTACAATCCAATGGAGTTTGTT 58.932 36.000 21.86 9.91 36.62 2.83
323 324 6.549364 TGTCTACAATCCAATGGAGTTTGTTT 59.451 34.615 21.86 2.49 36.62 2.83
324 325 7.721842 TGTCTACAATCCAATGGAGTTTGTTTA 59.278 33.333 21.86 10.94 36.62 2.01
325 326 8.573035 GTCTACAATCCAATGGAGTTTGTTTAA 58.427 33.333 21.86 7.71 36.62 1.52
326 327 9.137459 TCTACAATCCAATGGAGTTTGTTTAAA 57.863 29.630 21.86 7.42 36.62 1.52
327 328 9.927668 CTACAATCCAATGGAGTTTGTTTAAAT 57.072 29.630 21.86 3.77 36.62 1.40
328 329 8.831715 ACAATCCAATGGAGTTTGTTTAAATC 57.168 30.769 13.80 0.00 32.90 2.17
329 330 7.877612 ACAATCCAATGGAGTTTGTTTAAATCC 59.122 33.333 13.80 0.00 32.90 3.01
330 331 6.985653 TCCAATGGAGTTTGTTTAAATCCA 57.014 33.333 9.36 9.36 37.61 3.41
331 332 7.366847 TCCAATGGAGTTTGTTTAAATCCAA 57.633 32.000 10.68 0.12 37.20 3.53
332 333 7.972301 TCCAATGGAGTTTGTTTAAATCCAAT 58.028 30.769 10.68 1.43 37.20 3.16
333 334 8.435982 TCCAATGGAGTTTGTTTAAATCCAATT 58.564 29.630 10.68 4.85 37.20 2.32
334 335 9.065798 CCAATGGAGTTTGTTTAAATCCAATTT 57.934 29.630 10.68 1.12 37.20 1.82
336 337 8.846943 ATGGAGTTTGTTTAAATCCAATTTCC 57.153 30.769 10.68 11.01 37.20 3.13
337 338 7.796054 TGGAGTTTGTTTAAATCCAATTTCCA 58.204 30.769 14.22 14.22 34.00 3.53
338 339 8.435982 TGGAGTTTGTTTAAATCCAATTTCCAT 58.564 29.630 14.22 0.00 34.00 3.41
339 340 8.935844 GGAGTTTGTTTAAATCCAATTTCCATC 58.064 33.333 12.31 0.00 33.82 3.51
340 341 9.710900 GAGTTTGTTTAAATCCAATTTCCATCT 57.289 29.630 0.00 0.00 33.82 2.90
373 374 9.082313 AGAGAATTTACTTGACAAATTGATGGT 57.918 29.630 0.00 0.00 36.09 3.55
376 377 8.986477 AATTTACTTGACAAATTGATGGTAGC 57.014 30.769 0.00 0.00 34.97 3.58
377 378 7.517614 TTTACTTGACAAATTGATGGTAGCA 57.482 32.000 0.00 0.00 0.00 3.49
378 379 5.376854 ACTTGACAAATTGATGGTAGCAC 57.623 39.130 0.00 0.00 0.00 4.40
379 380 4.218417 ACTTGACAAATTGATGGTAGCACC 59.782 41.667 0.00 0.00 39.22 5.01
389 390 3.442996 GGTAGCACCACTAGCACTG 57.557 57.895 0.00 0.00 46.58 3.66
390 391 0.108138 GGTAGCACCACTAGCACTGG 60.108 60.000 0.00 0.00 46.58 4.00
391 392 0.108138 GTAGCACCACTAGCACTGGG 60.108 60.000 3.16 0.00 32.45 4.45
392 393 1.899437 TAGCACCACTAGCACTGGGC 61.899 60.000 0.00 0.00 45.30 5.36
405 406 4.322080 GCACTGGGCTTTTTAAAGACTT 57.678 40.909 7.92 0.00 43.70 3.01
406 407 4.693283 GCACTGGGCTTTTTAAAGACTTT 58.307 39.130 5.62 5.62 43.70 2.66
407 408 4.507756 GCACTGGGCTTTTTAAAGACTTTG 59.492 41.667 10.80 4.48 43.70 2.77
408 409 5.660460 CACTGGGCTTTTTAAAGACTTTGT 58.340 37.500 10.80 2.67 43.70 2.83
409 410 5.519927 CACTGGGCTTTTTAAAGACTTTGTG 59.480 40.000 10.80 9.89 43.70 3.33
410 411 5.017294 TGGGCTTTTTAAAGACTTTGTGG 57.983 39.130 10.80 0.00 43.70 4.17
411 412 4.712337 TGGGCTTTTTAAAGACTTTGTGGA 59.288 37.500 10.80 0.00 43.70 4.02
412 413 5.163457 TGGGCTTTTTAAAGACTTTGTGGAG 60.163 40.000 10.80 5.09 43.70 3.86
413 414 5.289595 GGCTTTTTAAAGACTTTGTGGAGG 58.710 41.667 10.80 0.00 40.95 4.30
414 415 5.163447 GGCTTTTTAAAGACTTTGTGGAGGT 60.163 40.000 10.80 0.00 40.95 3.85
415 416 6.338146 GCTTTTTAAAGACTTTGTGGAGGTT 58.662 36.000 10.80 0.00 38.28 3.50
416 417 6.255670 GCTTTTTAAAGACTTTGTGGAGGTTG 59.744 38.462 10.80 0.00 38.28 3.77
417 418 4.911514 TTAAAGACTTTGTGGAGGTTGC 57.088 40.909 10.80 0.00 0.00 4.17
418 419 2.736670 AAGACTTTGTGGAGGTTGCT 57.263 45.000 0.00 0.00 0.00 3.91
419 420 3.857157 AAGACTTTGTGGAGGTTGCTA 57.143 42.857 0.00 0.00 0.00 3.49
420 421 3.127425 AGACTTTGTGGAGGTTGCTAC 57.873 47.619 0.00 0.00 0.00 3.58
421 422 2.152016 GACTTTGTGGAGGTTGCTACC 58.848 52.381 9.54 9.54 45.39 3.18
429 430 3.089784 GGTTGCTACCGTGCGATG 58.910 61.111 0.36 0.00 34.01 3.84
430 431 2.461110 GGTTGCTACCGTGCGATGG 61.461 63.158 0.36 0.00 34.01 3.51
431 432 1.740296 GTTGCTACCGTGCGATGGT 60.740 57.895 5.54 5.54 41.23 3.55
432 433 0.458889 GTTGCTACCGTGCGATGGTA 60.459 55.000 6.95 6.95 38.67 3.25
433 434 0.462375 TTGCTACCGTGCGATGGTAT 59.538 50.000 7.45 0.00 38.92 2.73
434 435 1.320507 TGCTACCGTGCGATGGTATA 58.679 50.000 7.45 0.25 38.92 1.47
435 436 1.268625 TGCTACCGTGCGATGGTATAG 59.731 52.381 7.45 2.00 38.92 1.31
436 437 1.978542 CTACCGTGCGATGGTATAGC 58.021 55.000 7.45 0.00 38.92 2.97
437 438 0.239082 TACCGTGCGATGGTATAGCG 59.761 55.000 0.00 0.00 38.67 4.26
438 439 1.733041 CCGTGCGATGGTATAGCGG 60.733 63.158 0.00 0.00 38.92 5.52
439 440 1.007734 CGTGCGATGGTATAGCGGT 60.008 57.895 0.00 0.00 38.92 5.68
440 441 0.239082 CGTGCGATGGTATAGCGGTA 59.761 55.000 0.00 0.00 38.92 4.02
441 442 1.728179 CGTGCGATGGTATAGCGGTAG 60.728 57.143 0.00 0.00 38.92 3.18
442 443 0.242825 TGCGATGGTATAGCGGTAGC 59.757 55.000 0.00 1.94 45.58 3.58
453 454 3.760035 CGGTAGCGCCTGAGGTGT 61.760 66.667 14.33 3.27 35.34 4.16
454 455 2.125512 GGTAGCGCCTGAGGTGTG 60.126 66.667 14.33 0.00 35.34 3.82
455 456 2.125512 GTAGCGCCTGAGGTGTGG 60.126 66.667 14.33 0.00 35.34 4.17
456 457 2.603473 TAGCGCCTGAGGTGTGGT 60.603 61.111 14.33 5.74 35.34 4.16
457 458 2.214216 TAGCGCCTGAGGTGTGGTT 61.214 57.895 14.33 0.22 35.34 3.67
458 459 1.764571 TAGCGCCTGAGGTGTGGTTT 61.765 55.000 14.33 0.00 35.34 3.27
459 460 2.617274 GCGCCTGAGGTGTGGTTTC 61.617 63.158 14.33 0.00 35.34 2.78
460 461 1.227823 CGCCTGAGGTGTGGTTTCA 60.228 57.895 3.32 0.00 0.00 2.69
461 462 1.507141 CGCCTGAGGTGTGGTTTCAC 61.507 60.000 3.32 0.00 43.87 3.18
466 467 4.813346 GGTGTGGTTTCACCGGAT 57.187 55.556 9.46 0.00 46.38 4.18
467 468 3.940229 GGTGTGGTTTCACCGGATA 57.060 52.632 9.46 0.00 46.38 2.59
468 469 2.413310 GGTGTGGTTTCACCGGATAT 57.587 50.000 9.46 0.00 46.38 1.63
469 470 2.285977 GGTGTGGTTTCACCGGATATC 58.714 52.381 9.46 0.00 46.38 1.63
470 471 2.285977 GTGTGGTTTCACCGGATATCC 58.714 52.381 9.46 12.14 42.58 2.59
486 487 3.708544 CCGCCCCGGTAAACTCCA 61.709 66.667 0.00 0.00 42.73 3.86
487 488 2.435410 CGCCCCGGTAAACTCCAC 60.435 66.667 0.00 0.00 0.00 4.02
488 489 2.435410 GCCCCGGTAAACTCCACG 60.435 66.667 0.00 0.00 0.00 4.94
489 490 2.946346 GCCCCGGTAAACTCCACGA 61.946 63.158 0.00 0.00 0.00 4.35
490 491 1.217244 CCCCGGTAAACTCCACGAG 59.783 63.158 0.00 0.00 35.52 4.18
491 492 1.217244 CCCGGTAAACTCCACGAGG 59.783 63.158 0.00 0.00 33.35 4.63
492 493 1.447314 CCGGTAAACTCCACGAGGC 60.447 63.158 0.00 0.00 33.35 4.70
493 494 1.447314 CGGTAAACTCCACGAGGCC 60.447 63.158 0.00 0.00 33.35 5.19
494 495 1.447314 GGTAAACTCCACGAGGCCG 60.447 63.158 0.00 0.00 42.50 6.13
495 496 2.098831 GTAAACTCCACGAGGCCGC 61.099 63.158 0.00 0.00 39.95 6.53
496 497 2.575893 TAAACTCCACGAGGCCGCA 61.576 57.895 7.44 0.00 39.95 5.69
497 498 2.102109 TAAACTCCACGAGGCCGCAA 62.102 55.000 7.44 0.00 39.95 4.85
498 499 2.951475 AAACTCCACGAGGCCGCAAA 62.951 55.000 7.44 0.00 39.95 3.68
499 500 2.436646 CTCCACGAGGCCGCAAAT 60.437 61.111 7.44 0.00 39.95 2.32
500 501 2.435938 TCCACGAGGCCGCAAATC 60.436 61.111 7.44 0.00 39.95 2.17
501 502 2.436646 CCACGAGGCCGCAAATCT 60.437 61.111 7.44 0.00 39.95 2.40
502 503 1.153449 CCACGAGGCCGCAAATCTA 60.153 57.895 7.44 0.00 39.95 1.98
503 504 0.532862 CCACGAGGCCGCAAATCTAT 60.533 55.000 7.44 0.00 39.95 1.98
504 505 1.299541 CACGAGGCCGCAAATCTATT 58.700 50.000 7.44 0.00 39.95 1.73
505 506 1.670811 CACGAGGCCGCAAATCTATTT 59.329 47.619 7.44 0.00 39.95 1.40
520 521 6.808008 AATCTATTTGCCACTGGATATTCG 57.192 37.500 0.00 0.00 0.00 3.34
521 522 4.641396 TCTATTTGCCACTGGATATTCGG 58.359 43.478 0.00 0.00 0.00 4.30
522 523 1.388547 TTTGCCACTGGATATTCGGC 58.611 50.000 0.00 0.00 43.28 5.54
523 524 0.465460 TTGCCACTGGATATTCGGCC 60.465 55.000 0.00 0.00 42.27 6.13
524 525 1.600916 GCCACTGGATATTCGGCCC 60.601 63.158 0.00 0.00 36.73 5.80
525 526 1.301716 CCACTGGATATTCGGCCCG 60.302 63.158 0.00 0.00 0.00 6.13
526 527 1.745890 CACTGGATATTCGGCCCGA 59.254 57.895 0.00 0.00 0.00 5.14
527 528 0.319900 CACTGGATATTCGGCCCGAG 60.320 60.000 5.73 0.00 37.14 4.63
528 529 0.759436 ACTGGATATTCGGCCCGAGT 60.759 55.000 5.73 6.07 37.14 4.18
529 530 0.319900 CTGGATATTCGGCCCGAGTG 60.320 60.000 11.84 0.00 37.14 3.51
530 531 0.757561 TGGATATTCGGCCCGAGTGA 60.758 55.000 11.84 0.00 37.14 3.41
531 532 0.608640 GGATATTCGGCCCGAGTGAT 59.391 55.000 11.84 2.50 37.14 3.06
532 533 1.673033 GGATATTCGGCCCGAGTGATG 60.673 57.143 11.84 0.00 37.14 3.07
533 534 1.272490 GATATTCGGCCCGAGTGATGA 59.728 52.381 11.84 0.00 37.14 2.92
534 535 0.387929 TATTCGGCCCGAGTGATGAC 59.612 55.000 11.84 0.00 37.14 3.06
535 536 2.311688 ATTCGGCCCGAGTGATGACC 62.312 60.000 5.73 0.00 37.14 4.02
536 537 3.770040 CGGCCCGAGTGATGACCA 61.770 66.667 0.00 0.00 0.00 4.02
537 538 2.668632 GGCCCGAGTGATGACCAA 59.331 61.111 0.00 0.00 0.00 3.67
538 539 1.224592 GGCCCGAGTGATGACCAAT 59.775 57.895 0.00 0.00 0.00 3.16
539 540 1.097547 GGCCCGAGTGATGACCAATG 61.098 60.000 0.00 0.00 0.00 2.82
540 541 0.392998 GCCCGAGTGATGACCAATGT 60.393 55.000 0.00 0.00 0.00 2.71
541 542 1.656652 CCCGAGTGATGACCAATGTC 58.343 55.000 0.00 0.00 42.12 3.06
542 543 1.280982 CCGAGTGATGACCAATGTCG 58.719 55.000 0.00 0.00 44.86 4.35
543 544 0.647410 CGAGTGATGACCAATGTCGC 59.353 55.000 0.00 0.00 44.86 5.19
544 545 1.737029 CGAGTGATGACCAATGTCGCT 60.737 52.381 0.00 0.00 44.86 4.93
545 546 2.350522 GAGTGATGACCAATGTCGCTT 58.649 47.619 0.00 0.00 44.86 4.68
546 547 2.079158 AGTGATGACCAATGTCGCTTG 58.921 47.619 0.00 0.00 44.86 4.01
547 548 1.806542 GTGATGACCAATGTCGCTTGT 59.193 47.619 0.00 0.00 44.86 3.16
548 549 1.805943 TGATGACCAATGTCGCTTGTG 59.194 47.619 0.00 0.00 44.86 3.33
549 550 1.131126 GATGACCAATGTCGCTTGTGG 59.869 52.381 0.00 0.00 44.86 4.17
550 551 0.888736 TGACCAATGTCGCTTGTGGG 60.889 55.000 0.00 0.00 44.86 4.61
551 552 0.605319 GACCAATGTCGCTTGTGGGA 60.605 55.000 0.00 0.00 35.32 4.37
552 553 0.038166 ACCAATGTCGCTTGTGGGAT 59.962 50.000 0.00 0.00 37.48 3.85
553 554 0.452987 CCAATGTCGCTTGTGGGATG 59.547 55.000 0.00 0.00 37.48 3.51
554 555 1.452110 CAATGTCGCTTGTGGGATGA 58.548 50.000 0.00 0.00 37.48 2.92
555 556 2.019249 CAATGTCGCTTGTGGGATGAT 58.981 47.619 0.00 0.00 37.48 2.45
556 557 1.671979 ATGTCGCTTGTGGGATGATG 58.328 50.000 0.00 0.00 37.48 3.07
557 558 0.612744 TGTCGCTTGTGGGATGATGA 59.387 50.000 0.00 0.00 37.48 2.92
558 559 1.009829 GTCGCTTGTGGGATGATGAC 58.990 55.000 0.00 0.00 37.48 3.06
559 560 0.612744 TCGCTTGTGGGATGATGACA 59.387 50.000 0.00 0.00 0.00 3.58
560 561 1.210234 TCGCTTGTGGGATGATGACAT 59.790 47.619 0.00 0.00 39.67 3.06
561 562 1.332686 CGCTTGTGGGATGATGACATG 59.667 52.381 0.00 0.00 36.82 3.21
562 563 2.372264 GCTTGTGGGATGATGACATGT 58.628 47.619 0.00 0.00 36.82 3.21
563 564 2.098607 GCTTGTGGGATGATGACATGTG 59.901 50.000 1.15 0.00 36.82 3.21
564 565 3.349927 CTTGTGGGATGATGACATGTGT 58.650 45.455 1.15 0.00 36.82 3.72
565 566 4.516323 CTTGTGGGATGATGACATGTGTA 58.484 43.478 1.15 0.00 36.82 2.90
566 567 4.566426 TGTGGGATGATGACATGTGTAA 57.434 40.909 1.15 0.00 36.82 2.41
567 568 4.916183 TGTGGGATGATGACATGTGTAAA 58.084 39.130 1.15 0.00 36.82 2.01
568 569 5.320277 TGTGGGATGATGACATGTGTAAAA 58.680 37.500 1.15 0.00 36.82 1.52
569 570 5.951148 TGTGGGATGATGACATGTGTAAAAT 59.049 36.000 1.15 0.00 36.82 1.82
570 571 6.095300 TGTGGGATGATGACATGTGTAAAATC 59.905 38.462 1.15 0.00 36.82 2.17
571 572 5.593909 TGGGATGATGACATGTGTAAAATCC 59.406 40.000 1.15 9.14 36.82 3.01
572 573 5.593909 GGGATGATGACATGTGTAAAATCCA 59.406 40.000 1.15 0.00 36.82 3.41
573 574 6.266103 GGGATGATGACATGTGTAAAATCCAT 59.734 38.462 1.15 0.00 36.82 3.41
574 575 7.201938 GGGATGATGACATGTGTAAAATCCATT 60.202 37.037 1.15 0.00 36.82 3.16
575 576 8.199449 GGATGATGACATGTGTAAAATCCATTT 58.801 33.333 1.15 0.00 36.82 2.32
576 577 8.936070 ATGATGACATGTGTAAAATCCATTTG 57.064 30.769 1.15 0.00 35.21 2.32
577 578 6.812656 TGATGACATGTGTAAAATCCATTTGC 59.187 34.615 1.15 0.00 34.55 3.68
578 579 5.477510 TGACATGTGTAAAATCCATTTGCC 58.522 37.500 1.15 0.00 33.17 4.52
579 580 5.011431 TGACATGTGTAAAATCCATTTGCCA 59.989 36.000 1.15 0.00 33.17 4.92
580 581 5.237048 ACATGTGTAAAATCCATTTGCCAC 58.763 37.500 0.00 7.11 35.98 5.01
581 582 5.011943 ACATGTGTAAAATCCATTTGCCACT 59.988 36.000 0.00 1.53 36.21 4.00
582 583 5.132897 TGTGTAAAATCCATTTGCCACTC 57.867 39.130 12.19 3.33 36.21 3.51
583 584 4.832266 TGTGTAAAATCCATTTGCCACTCT 59.168 37.500 12.19 0.00 36.21 3.24
584 585 5.048083 TGTGTAAAATCCATTTGCCACTCTC 60.048 40.000 12.19 0.00 36.21 3.20
585 586 3.855689 AAAATCCATTTGCCACTCTCG 57.144 42.857 0.00 0.00 0.00 4.04
586 587 1.755179 AATCCATTTGCCACTCTCGG 58.245 50.000 0.00 0.00 0.00 4.63
587 588 0.911769 ATCCATTTGCCACTCTCGGA 59.088 50.000 0.00 0.00 0.00 4.55
588 589 0.911769 TCCATTTGCCACTCTCGGAT 59.088 50.000 0.00 0.00 0.00 4.18
589 590 1.019673 CCATTTGCCACTCTCGGATG 58.980 55.000 0.00 0.00 0.00 3.51
590 591 1.679944 CCATTTGCCACTCTCGGATGT 60.680 52.381 0.00 0.00 0.00 3.06
591 592 2.086869 CATTTGCCACTCTCGGATGTT 58.913 47.619 0.00 0.00 0.00 2.71
592 593 2.270352 TTTGCCACTCTCGGATGTTT 57.730 45.000 0.00 0.00 0.00 2.83
593 594 2.270352 TTGCCACTCTCGGATGTTTT 57.730 45.000 0.00 0.00 0.00 2.43
594 595 2.270352 TGCCACTCTCGGATGTTTTT 57.730 45.000 0.00 0.00 0.00 1.94
654 655 1.211457 GATGAGCCTCTCCACCATGTT 59.789 52.381 0.00 0.00 0.00 2.71
670 671 2.200930 TTGCCACATTGGGGTGCT 59.799 55.556 6.84 0.00 38.19 4.40
694 695 4.927782 GGTGGTCGGTGCACTGCA 62.928 66.667 21.33 11.25 35.60 4.41
743 746 0.813610 TGCAGTCGGTTCAGTGTTGG 60.814 55.000 0.00 0.00 0.00 3.77
744 747 0.814010 GCAGTCGGTTCAGTGTTGGT 60.814 55.000 0.00 0.00 0.00 3.67
745 748 1.217882 CAGTCGGTTCAGTGTTGGTC 58.782 55.000 0.00 0.00 0.00 4.02
748 751 2.935955 GGTTCAGTGTTGGTCGCG 59.064 61.111 0.00 0.00 0.00 5.87
749 752 2.604174 GGTTCAGTGTTGGTCGCGG 61.604 63.158 6.13 0.00 0.00 6.46
750 753 2.970324 TTCAGTGTTGGTCGCGGC 60.970 61.111 6.13 3.04 0.00 6.53
751 754 3.454587 TTCAGTGTTGGTCGCGGCT 62.455 57.895 11.94 0.00 0.00 5.52
808 811 0.246635 ACTCTGTGCACCATCGTACC 59.753 55.000 15.69 0.00 0.00 3.34
810 813 0.246360 TCTGTGCACCATCGTACCAG 59.754 55.000 15.69 1.27 0.00 4.00
812 815 1.079127 GTGCACCATCGTACCAGCT 60.079 57.895 5.22 0.00 0.00 4.24
813 816 0.174845 GTGCACCATCGTACCAGCTA 59.825 55.000 5.22 0.00 0.00 3.32
818 835 0.598680 CCATCGTACCAGCTAGCTGC 60.599 60.000 34.82 21.96 42.35 5.25
854 871 1.956170 CTCGGTGTCCTGTGTGCAC 60.956 63.158 10.75 10.75 0.00 4.57
856 873 1.523711 CGGTGTCCTGTGTGCACTT 60.524 57.895 19.41 0.00 33.96 3.16
858 875 0.179045 GGTGTCCTGTGTGCACTTCT 60.179 55.000 19.41 0.00 33.96 2.85
860 877 0.829990 TGTCCTGTGTGCACTTCTCA 59.170 50.000 19.41 10.77 0.00 3.27
861 878 1.417517 TGTCCTGTGTGCACTTCTCAT 59.582 47.619 19.41 0.00 0.00 2.90
866 883 1.672030 TGTGCACTTCTCATGGCCG 60.672 57.895 19.41 0.00 0.00 6.13
895 912 0.111253 ACTGGAGGGCAGGTTGAAAG 59.889 55.000 0.00 0.00 0.00 2.62
896 913 0.401738 CTGGAGGGCAGGTTGAAAGA 59.598 55.000 0.00 0.00 0.00 2.52
897 914 0.110486 TGGAGGGCAGGTTGAAAGAC 59.890 55.000 0.00 0.00 0.00 3.01
898 915 0.110486 GGAGGGCAGGTTGAAAGACA 59.890 55.000 0.00 0.00 0.00 3.41
899 916 1.528129 GAGGGCAGGTTGAAAGACAG 58.472 55.000 0.00 0.00 0.00 3.51
909 927 1.236616 TGAAAGACAGGCATGGCACG 61.237 55.000 22.64 14.27 36.64 5.34
927 945 3.357079 CTTGGCGTGACCCACTGC 61.357 66.667 0.00 0.00 37.83 4.40
940 958 1.135083 CCCACTGCTAACCGACACTAG 60.135 57.143 0.00 0.00 0.00 2.57
953 974 4.202243 ACCGACACTAGCTACTCCTACTAG 60.202 50.000 0.00 0.00 39.44 2.57
969 990 3.396685 ACTAGTCTGCATCCTCTCCTT 57.603 47.619 0.00 0.00 0.00 3.36
975 998 0.549902 TGCATCCTCTCCTTTCCCCA 60.550 55.000 0.00 0.00 0.00 4.96
993 1024 1.001746 CCACATCCTCCATCCATCTCG 59.998 57.143 0.00 0.00 0.00 4.04
994 1025 1.690893 CACATCCTCCATCCATCTCGT 59.309 52.381 0.00 0.00 0.00 4.18
996 1027 2.774234 ACATCCTCCATCCATCTCGTTT 59.226 45.455 0.00 0.00 0.00 3.60
1089 1129 2.202932 GTGGACGCGCATCATCCT 60.203 61.111 5.73 0.00 33.34 3.24
1090 1130 2.106938 TGGACGCGCATCATCCTC 59.893 61.111 5.73 0.00 33.34 3.71
1091 1131 2.106938 GGACGCGCATCATCCTCA 59.893 61.111 5.73 0.00 0.00 3.86
1094 1134 0.319383 GACGCGCATCATCCTCATCT 60.319 55.000 5.73 0.00 0.00 2.90
1097 1137 1.575576 GCGCATCATCCTCATCTGGC 61.576 60.000 0.30 0.00 0.00 4.85
1098 1138 1.289800 CGCATCATCCTCATCTGGCG 61.290 60.000 0.00 0.00 37.17 5.69
1099 1139 1.575576 GCATCATCCTCATCTGGCGC 61.576 60.000 0.00 0.00 0.00 6.53
1100 1140 0.954449 CATCATCCTCATCTGGCGCC 60.954 60.000 22.73 22.73 0.00 6.53
1101 1141 2.446142 ATCATCCTCATCTGGCGCCG 62.446 60.000 23.90 16.91 0.00 6.46
1133 1173 2.421073 ACGATCGTCATCTCACGGTAAA 59.579 45.455 16.60 0.00 40.35 2.01
1134 1174 2.782192 CGATCGTCATCTCACGGTAAAC 59.218 50.000 7.03 0.00 40.35 2.01
1160 1200 1.557443 AACTTTTCTCGCGCTCACCG 61.557 55.000 5.56 0.00 40.75 4.94
1186 1243 4.392940 AGTCAACTCCCAGTTTCTTCATG 58.607 43.478 0.00 0.00 36.03 3.07
1187 1244 3.057946 GTCAACTCCCAGTTTCTTCATGC 60.058 47.826 0.00 0.00 36.03 4.06
1188 1245 2.206576 ACTCCCAGTTTCTTCATGCC 57.793 50.000 0.00 0.00 0.00 4.40
1190 1247 2.290577 ACTCCCAGTTTCTTCATGCCTC 60.291 50.000 0.00 0.00 0.00 4.70
1191 1248 1.089920 CCCAGTTTCTTCATGCCTCG 58.910 55.000 0.00 0.00 0.00 4.63
1192 1249 1.339055 CCCAGTTTCTTCATGCCTCGA 60.339 52.381 0.00 0.00 0.00 4.04
1193 1250 2.636830 CCAGTTTCTTCATGCCTCGAT 58.363 47.619 0.00 0.00 0.00 3.59
1194 1251 2.611292 CCAGTTTCTTCATGCCTCGATC 59.389 50.000 0.00 0.00 0.00 3.69
1195 1252 3.529533 CAGTTTCTTCATGCCTCGATCT 58.470 45.455 0.00 0.00 0.00 2.75
1196 1253 3.309138 CAGTTTCTTCATGCCTCGATCTG 59.691 47.826 0.00 0.00 0.00 2.90
1197 1254 3.055530 AGTTTCTTCATGCCTCGATCTGT 60.056 43.478 0.00 0.00 0.00 3.41
1198 1255 3.616956 TTCTTCATGCCTCGATCTGTT 57.383 42.857 0.00 0.00 0.00 3.16
1199 1256 2.897436 TCTTCATGCCTCGATCTGTTG 58.103 47.619 0.00 0.00 0.00 3.33
1200 1257 1.329906 CTTCATGCCTCGATCTGTTGC 59.670 52.381 0.00 0.00 0.00 4.17
1201 1258 0.807275 TCATGCCTCGATCTGTTGCG 60.807 55.000 0.00 0.00 0.00 4.85
1202 1259 1.086067 CATGCCTCGATCTGTTGCGT 61.086 55.000 0.00 0.00 0.00 5.24
1203 1260 1.086067 ATGCCTCGATCTGTTGCGTG 61.086 55.000 0.00 0.00 0.00 5.34
1204 1261 1.446099 GCCTCGATCTGTTGCGTGA 60.446 57.895 0.00 0.00 0.00 4.35
1205 1262 1.687494 GCCTCGATCTGTTGCGTGAC 61.687 60.000 0.00 0.00 0.00 3.67
1206 1263 1.406219 CCTCGATCTGTTGCGTGACG 61.406 60.000 0.00 0.00 0.00 4.35
1234 1295 3.756933 AGCTACCGGTTACAAGTTCAA 57.243 42.857 15.04 0.00 0.00 2.69
1242 1303 5.471116 ACCGGTTACAAGTTCAAACTAATCC 59.529 40.000 0.00 0.00 38.57 3.01
1245 1306 6.425721 CGGTTACAAGTTCAAACTAATCCTCA 59.574 38.462 0.00 0.00 38.57 3.86
1247 1308 8.451748 GGTTACAAGTTCAAACTAATCCTCATC 58.548 37.037 0.00 0.00 38.57 2.92
1286 1354 4.364415 CTAAGCTAGCTTCTCTTCGTGT 57.636 45.455 32.51 8.36 37.47 4.49
1288 1356 3.224884 AGCTAGCTTCTCTTCGTGTTC 57.775 47.619 12.68 0.00 0.00 3.18
1291 1366 0.674534 AGCTTCTCTTCGTGTTCGGT 59.325 50.000 0.00 0.00 37.69 4.69
1296 1371 3.380479 TCTCTTCGTGTTCGGTTCATT 57.620 42.857 0.00 0.00 37.69 2.57
1298 1373 5.068234 TCTCTTCGTGTTCGGTTCATTAT 57.932 39.130 0.00 0.00 37.69 1.28
1302 1377 7.274904 TCTCTTCGTGTTCGGTTCATTATTTAG 59.725 37.037 0.00 0.00 37.69 1.85
1311 1386 9.152595 GTTCGGTTCATTATTTAGTCTTCTTCT 57.847 33.333 0.00 0.00 0.00 2.85
1312 1387 9.720769 TTCGGTTCATTATTTAGTCTTCTTCTT 57.279 29.630 0.00 0.00 0.00 2.52
1313 1388 9.151471 TCGGTTCATTATTTAGTCTTCTTCTTG 57.849 33.333 0.00 0.00 0.00 3.02
1314 1389 7.905493 CGGTTCATTATTTAGTCTTCTTCTTGC 59.095 37.037 0.00 0.00 0.00 4.01
1422 1540 1.133792 ACGGGCCTGCTGCTATTAATT 60.134 47.619 12.89 0.00 40.92 1.40
1445 1563 1.407575 CGCTCTCTCTACCTCTCCACA 60.408 57.143 0.00 0.00 0.00 4.17
1446 1564 2.021457 GCTCTCTCTACCTCTCCACAC 58.979 57.143 0.00 0.00 0.00 3.82
1447 1565 2.619332 GCTCTCTCTACCTCTCCACACA 60.619 54.545 0.00 0.00 0.00 3.72
1448 1566 3.897239 CTCTCTCTACCTCTCCACACAT 58.103 50.000 0.00 0.00 0.00 3.21
1471 1589 1.672030 CTTCACGCATGCACCTCCA 60.672 57.895 19.57 0.00 0.00 3.86
1483 1601 1.798626 CACCTCCATCTCCATCTCCA 58.201 55.000 0.00 0.00 0.00 3.86
1486 1604 2.090324 ACCTCCATCTCCATCTCCATCA 60.090 50.000 0.00 0.00 0.00 3.07
1487 1605 2.302445 CCTCCATCTCCATCTCCATCAC 59.698 54.545 0.00 0.00 0.00 3.06
1488 1606 2.302445 CTCCATCTCCATCTCCATCACC 59.698 54.545 0.00 0.00 0.00 4.02
1491 1609 2.502068 TCTCCATCTCCATCACCCAT 57.498 50.000 0.00 0.00 0.00 4.00
1494 1612 1.142936 CCATCTCCATCACCCATCCA 58.857 55.000 0.00 0.00 0.00 3.41
1555 1687 1.300697 GCGTCGTCCTCCTTGTTGT 60.301 57.895 0.00 0.00 0.00 3.32
1557 1689 1.002250 CGTCGTCCTCCTTGTTGTCG 61.002 60.000 0.00 0.00 0.00 4.35
1618 1750 8.002984 TCGGTAAACAGATAGATGAACACATA 57.997 34.615 0.00 0.00 0.00 2.29
1633 1765 5.048782 TGAACACATACATTTGCTCTGAACC 60.049 40.000 0.00 0.00 0.00 3.62
1634 1766 4.397420 ACACATACATTTGCTCTGAACCA 58.603 39.130 0.00 0.00 0.00 3.67
1645 1777 4.323417 TGCTCTGAACCAATGTTACGAAT 58.677 39.130 0.00 0.00 33.97 3.34
1648 1780 3.930229 TCTGAACCAATGTTACGAATCCG 59.070 43.478 0.00 0.00 36.95 4.18
1653 1785 3.134081 ACCAATGTTACGAATCCGGAGAT 59.866 43.478 11.34 0.01 40.78 2.75
1670 1806 4.084849 CGGAGATGCGTTAGCTTGATTAAG 60.085 45.833 0.00 0.00 45.42 1.85
1687 1823 9.606631 CTTGATTAAGCTAACTAATCACTTCCT 57.393 33.333 15.69 0.00 39.18 3.36
1694 1830 3.819564 ACTAATCACTTCCTGCGCATA 57.180 42.857 12.24 0.00 0.00 3.14
1695 1831 3.722147 ACTAATCACTTCCTGCGCATAG 58.278 45.455 12.24 11.70 0.00 2.23
1768 1907 1.134401 TCTCGGAGGTGAAATGCCATC 60.134 52.381 4.96 0.00 0.00 3.51
1770 1909 0.461870 CGGAGGTGAAATGCCATCGA 60.462 55.000 0.00 0.00 0.00 3.59
1773 1912 2.291741 GGAGGTGAAATGCCATCGATTC 59.708 50.000 0.00 0.00 0.00 2.52
1785 1924 3.535561 CCATCGATTCATATGCCTACCC 58.464 50.000 0.00 0.00 0.00 3.69
1787 1926 2.902608 TCGATTCATATGCCTACCCCT 58.097 47.619 0.00 0.00 0.00 4.79
1793 1932 5.718801 TTCATATGCCTACCCCTGTTTAA 57.281 39.130 0.00 0.00 0.00 1.52
1798 1937 5.675684 ATGCCTACCCCTGTTTAAATTTG 57.324 39.130 0.00 0.00 0.00 2.32
1803 1942 6.239487 GCCTACCCCTGTTTAAATTTGTTTCT 60.239 38.462 0.00 0.00 0.00 2.52
1805 1948 8.208224 CCTACCCCTGTTTAAATTTGTTTCTTT 58.792 33.333 0.00 0.00 0.00 2.52
1806 1949 7.857734 ACCCCTGTTTAAATTTGTTTCTTTG 57.142 32.000 0.00 0.00 0.00 2.77
1821 1964 7.321745 TGTTTCTTTGTCTTCTTCTTCTTCC 57.678 36.000 0.00 0.00 0.00 3.46
1828 1971 1.807142 CTTCTTCTTCTTCCGCAACCC 59.193 52.381 0.00 0.00 0.00 4.11
1841 1984 2.159572 CCGCAACCCTGAATTTACTTCG 60.160 50.000 0.00 0.00 36.60 3.79
1920 2063 1.000607 GCCATTGCATGCTCGATGATT 60.001 47.619 20.33 0.00 37.47 2.57
1922 2065 3.818387 CCATTGCATGCTCGATGATTAC 58.182 45.455 20.33 0.00 33.31 1.89
2169 2332 2.615240 GCAAACCCAAATGCCCCTAAAG 60.615 50.000 0.00 0.00 36.56 1.85
2174 2337 3.103742 CCCAAATGCCCCTAAAGCTAAA 58.896 45.455 0.00 0.00 0.00 1.85
2179 2342 6.098266 CCAAATGCCCCTAAAGCTAAACTAAT 59.902 38.462 0.00 0.00 0.00 1.73
2180 2343 6.715347 AATGCCCCTAAAGCTAAACTAATG 57.285 37.500 0.00 0.00 0.00 1.90
2181 2344 5.444744 TGCCCCTAAAGCTAAACTAATGA 57.555 39.130 0.00 0.00 0.00 2.57
2183 2346 5.885912 TGCCCCTAAAGCTAAACTAATGAAG 59.114 40.000 0.00 0.00 0.00 3.02
2184 2347 5.221067 GCCCCTAAAGCTAAACTAATGAAGC 60.221 44.000 0.00 0.00 35.16 3.86
2185 2348 5.885912 CCCCTAAAGCTAAACTAATGAAGCA 59.114 40.000 0.00 0.00 37.44 3.91
2186 2349 6.183360 CCCCTAAAGCTAAACTAATGAAGCAC 60.183 42.308 0.00 0.00 37.44 4.40
2187 2350 6.599638 CCCTAAAGCTAAACTAATGAAGCACT 59.400 38.462 0.00 0.00 37.44 4.40
2188 2351 7.201652 CCCTAAAGCTAAACTAATGAAGCACTC 60.202 40.741 0.00 0.00 37.44 3.51
2190 2353 5.428184 AGCTAAACTAATGAAGCACTCCT 57.572 39.130 0.00 0.00 37.44 3.69
2200 2375 0.403271 AAGCACTCCTCATGCAAGGT 59.597 50.000 4.36 0.00 45.92 3.50
2218 2393 6.070309 TGCAAGGTGGGCTAAAAATTATGATT 60.070 34.615 0.00 0.00 0.00 2.57
2313 2498 7.547227 TGTGGATCATATAGAATCGTGTATGG 58.453 38.462 0.00 0.00 0.00 2.74
2361 2546 6.441088 AGCTATTTAGGTCCTAATGAAGGG 57.559 41.667 12.25 2.22 46.55 3.95
2362 2547 6.151049 AGCTATTTAGGTCCTAATGAAGGGA 58.849 40.000 12.25 0.00 46.55 4.20
2392 2577 5.136048 AGGAGGAGATCAAAGAGAGGTAGAT 59.864 44.000 0.00 0.00 0.00 1.98
2431 2616 3.184382 TCCCCTCTTGTGTACTCATCA 57.816 47.619 0.00 0.00 0.00 3.07
2592 2784 2.281762 GCAGCACTATTTTCTACCGTCG 59.718 50.000 0.00 0.00 0.00 5.12
2652 4027 2.487428 CGGAGAGTCTGTGGAGCG 59.513 66.667 0.00 0.00 0.00 5.03
2839 4248 7.845617 TGTTCATCGTGTAGTTTAAAAATGC 57.154 32.000 0.00 0.00 0.00 3.56
3088 4521 9.593134 TGTTTTACAATGTAAAAGAATTGTGCT 57.407 25.926 26.01 0.00 44.57 4.40
3146 4580 4.688511 TGTAGCGTGTTTTGAAAAGTGT 57.311 36.364 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.399191 TGGAAGCTACTCTCCTAATTTACAAGA 59.601 37.037 3.88 0.00 0.00 3.02
2 3 7.556844 TGGAAGCTACTCTCCTAATTTACAAG 58.443 38.462 3.88 0.00 0.00 3.16
3 4 7.180408 ACTGGAAGCTACTCTCCTAATTTACAA 59.820 37.037 3.88 0.00 37.60 2.41
7 8 5.485708 ACACTGGAAGCTACTCTCCTAATTT 59.514 40.000 3.88 0.00 37.60 1.82
8 9 5.026790 ACACTGGAAGCTACTCTCCTAATT 58.973 41.667 3.88 0.00 37.60 1.40
9 10 4.615513 ACACTGGAAGCTACTCTCCTAAT 58.384 43.478 3.88 0.00 37.60 1.73
10 11 4.048970 ACACTGGAAGCTACTCTCCTAA 57.951 45.455 3.88 0.00 37.60 2.69
11 12 3.741245 ACACTGGAAGCTACTCTCCTA 57.259 47.619 3.88 0.00 37.60 2.94
12 13 2.614134 ACACTGGAAGCTACTCTCCT 57.386 50.000 3.88 0.00 37.60 3.69
13 14 3.129638 CACTACACTGGAAGCTACTCTCC 59.870 52.174 0.00 0.00 37.60 3.71
14 15 4.011023 TCACTACACTGGAAGCTACTCTC 58.989 47.826 0.00 0.00 37.60 3.20
15 16 4.013728 CTCACTACACTGGAAGCTACTCT 58.986 47.826 0.00 0.00 37.60 3.24
16 17 3.428316 GCTCACTACACTGGAAGCTACTC 60.428 52.174 0.00 0.00 37.60 2.59
17 18 2.494073 GCTCACTACACTGGAAGCTACT 59.506 50.000 0.00 0.00 37.60 2.57
18 19 2.494073 AGCTCACTACACTGGAAGCTAC 59.506 50.000 0.00 0.00 37.60 3.58
19 20 2.808919 AGCTCACTACACTGGAAGCTA 58.191 47.619 0.00 0.00 37.60 3.32
20 21 1.638529 AGCTCACTACACTGGAAGCT 58.361 50.000 0.00 0.00 37.60 3.74
21 22 2.494073 ACTAGCTCACTACACTGGAAGC 59.506 50.000 0.00 0.00 37.60 3.86
22 23 3.119316 CCACTAGCTCACTACACTGGAAG 60.119 52.174 0.00 0.00 42.29 3.46
23 24 2.826128 CCACTAGCTCACTACACTGGAA 59.174 50.000 0.00 0.00 0.00 3.53
24 25 2.447443 CCACTAGCTCACTACACTGGA 58.553 52.381 0.00 0.00 0.00 3.86
25 26 1.134965 GCCACTAGCTCACTACACTGG 60.135 57.143 0.00 0.00 38.99 4.00
26 27 2.285827 GCCACTAGCTCACTACACTG 57.714 55.000 0.00 0.00 38.99 3.66
37 38 4.811557 CACTTACTTCCATTAGCCACTAGC 59.188 45.833 0.00 0.00 44.25 3.42
38 39 5.812642 CACACTTACTTCCATTAGCCACTAG 59.187 44.000 0.00 0.00 0.00 2.57
39 40 5.338056 CCACACTTACTTCCATTAGCCACTA 60.338 44.000 0.00 0.00 0.00 2.74
40 41 4.565652 CCACACTTACTTCCATTAGCCACT 60.566 45.833 0.00 0.00 0.00 4.00
41 42 3.689649 CCACACTTACTTCCATTAGCCAC 59.310 47.826 0.00 0.00 0.00 5.01
42 43 3.872240 GCCACACTTACTTCCATTAGCCA 60.872 47.826 0.00 0.00 0.00 4.75
43 44 2.683362 GCCACACTTACTTCCATTAGCC 59.317 50.000 0.00 0.00 0.00 3.93
44 45 3.343617 TGCCACACTTACTTCCATTAGC 58.656 45.455 0.00 0.00 0.00 3.09
45 46 3.941483 CCTGCCACACTTACTTCCATTAG 59.059 47.826 0.00 0.00 0.00 1.73
46 47 3.329520 ACCTGCCACACTTACTTCCATTA 59.670 43.478 0.00 0.00 0.00 1.90
47 48 2.108250 ACCTGCCACACTTACTTCCATT 59.892 45.455 0.00 0.00 0.00 3.16
48 49 1.705186 ACCTGCCACACTTACTTCCAT 59.295 47.619 0.00 0.00 0.00 3.41
49 50 1.136828 ACCTGCCACACTTACTTCCA 58.863 50.000 0.00 0.00 0.00 3.53
50 51 1.202770 ACACCTGCCACACTTACTTCC 60.203 52.381 0.00 0.00 0.00 3.46
51 52 2.256117 ACACCTGCCACACTTACTTC 57.744 50.000 0.00 0.00 0.00 3.01
52 53 3.849563 TTACACCTGCCACACTTACTT 57.150 42.857 0.00 0.00 0.00 2.24
53 54 3.496160 CCTTTACACCTGCCACACTTACT 60.496 47.826 0.00 0.00 0.00 2.24
54 55 2.812011 CCTTTACACCTGCCACACTTAC 59.188 50.000 0.00 0.00 0.00 2.34
55 56 2.812613 GCCTTTACACCTGCCACACTTA 60.813 50.000 0.00 0.00 0.00 2.24
56 57 1.981256 CCTTTACACCTGCCACACTT 58.019 50.000 0.00 0.00 0.00 3.16
57 58 0.537371 GCCTTTACACCTGCCACACT 60.537 55.000 0.00 0.00 0.00 3.55
58 59 0.821711 TGCCTTTACACCTGCCACAC 60.822 55.000 0.00 0.00 0.00 3.82
59 60 0.821711 GTGCCTTTACACCTGCCACA 60.822 55.000 0.00 0.00 34.35 4.17
60 61 0.537371 AGTGCCTTTACACCTGCCAC 60.537 55.000 0.00 0.00 41.67 5.01
61 62 0.184933 AAGTGCCTTTACACCTGCCA 59.815 50.000 0.00 0.00 41.67 4.92
62 63 1.810755 GTAAGTGCCTTTACACCTGCC 59.189 52.381 3.37 0.00 41.67 4.85
63 64 2.779506 AGTAAGTGCCTTTACACCTGC 58.220 47.619 9.33 0.00 41.67 4.85
64 65 3.058224 GCAAGTAAGTGCCTTTACACCTG 60.058 47.826 9.33 5.56 41.67 4.00
65 66 3.146847 GCAAGTAAGTGCCTTTACACCT 58.853 45.455 9.33 0.00 41.67 4.00
66 67 3.554259 GCAAGTAAGTGCCTTTACACC 57.446 47.619 9.33 0.00 41.67 4.16
75 76 3.565516 GCAAACTAAGGCAAGTAAGTGC 58.434 45.455 0.00 0.00 44.14 4.40
76 77 3.568007 TGGCAAACTAAGGCAAGTAAGTG 59.432 43.478 0.00 0.00 38.71 3.16
77 78 3.827722 TGGCAAACTAAGGCAAGTAAGT 58.172 40.909 0.00 0.00 38.71 2.24
78 79 4.737054 CATGGCAAACTAAGGCAAGTAAG 58.263 43.478 0.00 0.00 45.03 2.34
79 80 3.056891 GCATGGCAAACTAAGGCAAGTAA 60.057 43.478 0.00 0.00 45.03 2.24
80 81 2.491693 GCATGGCAAACTAAGGCAAGTA 59.508 45.455 0.00 0.00 45.03 2.24
81 82 1.273327 GCATGGCAAACTAAGGCAAGT 59.727 47.619 0.00 0.00 45.03 3.16
82 83 1.404583 GGCATGGCAAACTAAGGCAAG 60.405 52.381 15.47 0.00 45.03 4.01
83 84 0.607620 GGCATGGCAAACTAAGGCAA 59.392 50.000 15.47 0.00 45.03 4.52
84 85 0.541530 TGGCATGGCAAACTAAGGCA 60.542 50.000 21.13 0.00 45.98 4.75
85 86 0.108662 GTGGCATGGCAAACTAAGGC 60.109 55.000 25.11 4.93 0.00 4.35
86 87 1.474077 GAGTGGCATGGCAAACTAAGG 59.526 52.381 25.11 0.00 29.41 2.69
87 88 2.440409 AGAGTGGCATGGCAAACTAAG 58.560 47.619 25.11 0.00 29.41 2.18
88 89 2.584835 AGAGTGGCATGGCAAACTAA 57.415 45.000 25.11 0.00 29.41 2.24
89 90 3.931907 ATAGAGTGGCATGGCAAACTA 57.068 42.857 25.11 25.94 29.41 2.24
90 91 2.814805 ATAGAGTGGCATGGCAAACT 57.185 45.000 25.11 24.78 31.38 2.66
91 92 3.874392 AAATAGAGTGGCATGGCAAAC 57.126 42.857 25.11 19.46 0.00 2.93
92 93 4.282957 TCAAAAATAGAGTGGCATGGCAAA 59.717 37.500 25.11 10.27 0.00 3.68
93 94 3.831333 TCAAAAATAGAGTGGCATGGCAA 59.169 39.130 25.11 8.87 0.00 4.52
94 95 3.429492 TCAAAAATAGAGTGGCATGGCA 58.571 40.909 19.43 19.43 0.00 4.92
95 96 3.696051 TCTCAAAAATAGAGTGGCATGGC 59.304 43.478 13.29 13.29 34.73 4.40
96 97 5.188434 TCTCTCAAAAATAGAGTGGCATGG 58.812 41.667 0.00 0.00 41.11 3.66
97 98 6.939132 ATCTCTCAAAAATAGAGTGGCATG 57.061 37.500 0.00 0.00 41.11 4.06
98 99 7.951347 AAATCTCTCAAAAATAGAGTGGCAT 57.049 32.000 0.00 0.00 41.11 4.40
99 100 7.554118 CCTAAATCTCTCAAAAATAGAGTGGCA 59.446 37.037 0.00 0.00 41.11 4.92
100 101 7.012799 CCCTAAATCTCTCAAAAATAGAGTGGC 59.987 40.741 0.00 0.00 41.11 5.01
101 102 8.267894 TCCCTAAATCTCTCAAAAATAGAGTGG 58.732 37.037 0.00 0.00 41.11 4.00
102 103 9.323985 CTCCCTAAATCTCTCAAAAATAGAGTG 57.676 37.037 0.00 0.00 41.11 3.51
103 104 9.052365 ACTCCCTAAATCTCTCAAAAATAGAGT 57.948 33.333 0.00 0.00 41.11 3.24
104 105 9.323985 CACTCCCTAAATCTCTCAAAAATAGAG 57.676 37.037 0.00 0.00 41.59 2.43
105 106 8.826765 ACACTCCCTAAATCTCTCAAAAATAGA 58.173 33.333 0.00 0.00 0.00 1.98
106 107 9.454859 AACACTCCCTAAATCTCTCAAAAATAG 57.545 33.333 0.00 0.00 0.00 1.73
107 108 9.231297 CAACACTCCCTAAATCTCTCAAAAATA 57.769 33.333 0.00 0.00 0.00 1.40
108 109 7.177392 CCAACACTCCCTAAATCTCTCAAAAAT 59.823 37.037 0.00 0.00 0.00 1.82
109 110 6.490040 CCAACACTCCCTAAATCTCTCAAAAA 59.510 38.462 0.00 0.00 0.00 1.94
110 111 6.003950 CCAACACTCCCTAAATCTCTCAAAA 58.996 40.000 0.00 0.00 0.00 2.44
111 112 5.514834 CCCAACACTCCCTAAATCTCTCAAA 60.515 44.000 0.00 0.00 0.00 2.69
112 113 4.019321 CCCAACACTCCCTAAATCTCTCAA 60.019 45.833 0.00 0.00 0.00 3.02
113 114 3.519510 CCCAACACTCCCTAAATCTCTCA 59.480 47.826 0.00 0.00 0.00 3.27
114 115 3.775316 TCCCAACACTCCCTAAATCTCTC 59.225 47.826 0.00 0.00 0.00 3.20
115 116 3.777522 CTCCCAACACTCCCTAAATCTCT 59.222 47.826 0.00 0.00 0.00 3.10
116 117 3.519913 ACTCCCAACACTCCCTAAATCTC 59.480 47.826 0.00 0.00 0.00 2.75
117 118 3.519913 GACTCCCAACACTCCCTAAATCT 59.480 47.826 0.00 0.00 0.00 2.40
118 119 3.370633 GGACTCCCAACACTCCCTAAATC 60.371 52.174 0.00 0.00 0.00 2.17
119 120 2.576648 GGACTCCCAACACTCCCTAAAT 59.423 50.000 0.00 0.00 0.00 1.40
120 121 1.982958 GGACTCCCAACACTCCCTAAA 59.017 52.381 0.00 0.00 0.00 1.85
121 122 1.652947 GGACTCCCAACACTCCCTAA 58.347 55.000 0.00 0.00 0.00 2.69
122 123 0.252558 GGGACTCCCAACACTCCCTA 60.253 60.000 9.53 0.00 44.65 3.53
123 124 1.539124 GGGACTCCCAACACTCCCT 60.539 63.158 9.53 0.00 44.65 4.20
124 125 3.078817 GGGACTCCCAACACTCCC 58.921 66.667 9.53 0.00 44.65 4.30
137 138 1.687297 GGAATCGGGAGTGGAGGGAC 61.687 65.000 0.00 0.00 0.00 4.46
138 139 1.382695 GGAATCGGGAGTGGAGGGA 60.383 63.158 0.00 0.00 0.00 4.20
139 140 2.797278 CGGAATCGGGAGTGGAGGG 61.797 68.421 0.00 0.00 0.00 4.30
140 141 2.815308 CGGAATCGGGAGTGGAGG 59.185 66.667 0.00 0.00 0.00 4.30
141 142 2.107141 GCGGAATCGGGAGTGGAG 59.893 66.667 0.00 0.00 36.79 3.86
142 143 2.363795 AGCGGAATCGGGAGTGGA 60.364 61.111 0.00 0.00 36.79 4.02
143 144 2.107141 GAGCGGAATCGGGAGTGG 59.893 66.667 0.00 0.00 36.79 4.00
144 145 2.278857 CGAGCGGAATCGGGAGTG 60.279 66.667 0.00 0.00 39.04 3.51
145 146 4.208686 GCGAGCGGAATCGGGAGT 62.209 66.667 5.42 0.00 42.94 3.85
183 184 4.355543 TTTTGCAGCTCCGCTAATTTAG 57.644 40.909 0.00 0.00 36.40 1.85
184 185 4.981806 ATTTTGCAGCTCCGCTAATTTA 57.018 36.364 0.00 0.00 36.40 1.40
185 186 3.874392 ATTTTGCAGCTCCGCTAATTT 57.126 38.095 0.00 0.00 36.40 1.82
186 187 3.316308 CCTATTTTGCAGCTCCGCTAATT 59.684 43.478 0.00 0.00 36.40 1.40
187 188 2.880890 CCTATTTTGCAGCTCCGCTAAT 59.119 45.455 0.00 1.15 36.40 1.73
188 189 2.288666 CCTATTTTGCAGCTCCGCTAA 58.711 47.619 0.00 0.00 36.40 3.09
189 190 1.209504 ACCTATTTTGCAGCTCCGCTA 59.790 47.619 0.00 0.00 36.40 4.26
190 191 0.035056 ACCTATTTTGCAGCTCCGCT 60.035 50.000 0.00 0.00 40.77 5.52
191 192 0.099436 CACCTATTTTGCAGCTCCGC 59.901 55.000 0.00 0.00 0.00 5.54
192 193 0.099436 GCACCTATTTTGCAGCTCCG 59.901 55.000 0.00 0.00 39.93 4.63
193 194 1.403323 GAGCACCTATTTTGCAGCTCC 59.597 52.381 8.67 0.00 42.83 4.70
194 195 1.403323 GGAGCACCTATTTTGCAGCTC 59.597 52.381 10.85 10.85 45.65 4.09
195 196 1.467920 GGAGCACCTATTTTGCAGCT 58.532 50.000 0.00 0.00 42.83 4.24
196 197 0.099436 CGGAGCACCTATTTTGCAGC 59.901 55.000 0.00 0.00 42.83 5.25
211 212 2.918712 AATTACAGGGATCTGCGGAG 57.081 50.000 0.00 0.00 44.59 4.63
212 213 2.483013 CGAAATTACAGGGATCTGCGGA 60.483 50.000 0.00 0.00 44.59 5.54
213 214 1.867233 CGAAATTACAGGGATCTGCGG 59.133 52.381 0.00 0.00 44.59 5.69
214 215 1.261619 GCGAAATTACAGGGATCTGCG 59.738 52.381 0.00 0.00 44.59 5.18
215 216 1.261619 CGCGAAATTACAGGGATCTGC 59.738 52.381 0.00 0.00 44.59 4.26
216 217 1.867233 CCGCGAAATTACAGGGATCTG 59.133 52.381 8.23 0.00 46.10 2.90
217 218 1.760613 TCCGCGAAATTACAGGGATCT 59.239 47.619 8.23 0.00 0.00 2.75
218 219 2.135933 CTCCGCGAAATTACAGGGATC 58.864 52.381 8.23 0.00 0.00 3.36
219 220 1.810412 GCTCCGCGAAATTACAGGGAT 60.810 52.381 8.23 0.00 0.00 3.85
220 221 0.461339 GCTCCGCGAAATTACAGGGA 60.461 55.000 8.23 0.00 0.00 4.20
221 222 1.436983 GGCTCCGCGAAATTACAGGG 61.437 60.000 8.23 0.00 0.00 4.45
222 223 1.762222 CGGCTCCGCGAAATTACAGG 61.762 60.000 8.23 0.00 0.00 4.00
223 224 1.636340 CGGCTCCGCGAAATTACAG 59.364 57.895 8.23 0.00 0.00 2.74
224 225 1.812093 CCGGCTCCGCGAAATTACA 60.812 57.895 8.23 0.00 38.24 2.41
225 226 2.531376 CCCGGCTCCGCGAAATTAC 61.531 63.158 8.23 0.00 38.24 1.89
226 227 2.202960 CCCGGCTCCGCGAAATTA 60.203 61.111 8.23 0.00 38.24 1.40
227 228 4.404098 ACCCGGCTCCGCGAAATT 62.404 61.111 8.23 0.00 38.24 1.82
233 234 3.857038 TTATCCACCCGGCTCCGC 61.857 66.667 0.00 0.00 38.24 5.54
234 235 2.108362 GTTATCCACCCGGCTCCG 59.892 66.667 0.00 0.48 39.44 4.63
235 236 2.509422 GGTTATCCACCCGGCTCC 59.491 66.667 0.00 0.00 40.19 4.70
236 237 1.963464 TTCGGTTATCCACCCGGCTC 61.963 60.000 0.00 0.00 43.83 4.70
237 238 1.991167 TTCGGTTATCCACCCGGCT 60.991 57.895 0.00 0.00 43.83 5.52
238 239 1.816679 GTTCGGTTATCCACCCGGC 60.817 63.158 0.00 0.00 43.83 6.13
239 240 0.461339 CTGTTCGGTTATCCACCCGG 60.461 60.000 0.00 0.00 43.83 5.73
240 241 0.461339 CCTGTTCGGTTATCCACCCG 60.461 60.000 0.00 0.00 43.83 5.28
241 242 0.746923 GCCTGTTCGGTTATCCACCC 60.747 60.000 0.00 0.00 43.83 4.61
242 243 0.746923 GGCCTGTTCGGTTATCCACC 60.747 60.000 0.00 0.00 43.16 4.61
243 244 0.746923 GGGCCTGTTCGGTTATCCAC 60.747 60.000 0.84 0.00 34.25 4.02
244 245 0.912487 AGGGCCTGTTCGGTTATCCA 60.912 55.000 4.50 0.00 34.25 3.41
245 246 0.255033 AAGGGCCTGTTCGGTTATCC 59.745 55.000 6.92 0.00 34.25 2.59
246 247 2.433239 TCTAAGGGCCTGTTCGGTTATC 59.567 50.000 6.92 0.00 34.25 1.75
247 248 2.434702 CTCTAAGGGCCTGTTCGGTTAT 59.565 50.000 6.92 0.00 34.25 1.89
248 249 1.829222 CTCTAAGGGCCTGTTCGGTTA 59.171 52.381 6.92 0.00 34.25 2.85
249 250 0.613777 CTCTAAGGGCCTGTTCGGTT 59.386 55.000 6.92 0.00 34.25 4.44
250 251 0.252103 TCTCTAAGGGCCTGTTCGGT 60.252 55.000 6.92 0.00 34.25 4.69
251 252 0.902531 TTCTCTAAGGGCCTGTTCGG 59.097 55.000 6.92 0.00 0.00 4.30
252 253 1.275291 TGTTCTCTAAGGGCCTGTTCG 59.725 52.381 6.92 0.00 0.00 3.95
253 254 3.636153 ATGTTCTCTAAGGGCCTGTTC 57.364 47.619 6.92 0.00 0.00 3.18
254 255 4.082125 CAAATGTTCTCTAAGGGCCTGTT 58.918 43.478 6.92 0.00 0.00 3.16
255 256 3.074538 ACAAATGTTCTCTAAGGGCCTGT 59.925 43.478 6.92 0.00 0.00 4.00
256 257 3.690460 ACAAATGTTCTCTAAGGGCCTG 58.310 45.455 6.92 0.00 0.00 4.85
257 258 3.330701 TGACAAATGTTCTCTAAGGGCCT 59.669 43.478 0.00 0.00 0.00 5.19
258 259 3.686016 TGACAAATGTTCTCTAAGGGCC 58.314 45.455 0.00 0.00 0.00 5.80
259 260 4.762251 AGTTGACAAATGTTCTCTAAGGGC 59.238 41.667 0.00 0.00 0.00 5.19
260 261 6.884280 AAGTTGACAAATGTTCTCTAAGGG 57.116 37.500 0.00 0.00 0.00 3.95
261 262 9.665264 GTAAAAGTTGACAAATGTTCTCTAAGG 57.335 33.333 0.00 0.00 0.00 2.69
265 266 8.956426 TCTTGTAAAAGTTGACAAATGTTCTCT 58.044 29.630 0.00 0.00 35.24 3.10
266 267 9.736023 ATCTTGTAAAAGTTGACAAATGTTCTC 57.264 29.630 0.00 0.00 35.24 2.87
288 289 9.730705 CCATTGGATTGTAGACATATGTATCTT 57.269 33.333 8.71 0.00 0.00 2.40
289 290 9.104713 TCCATTGGATTGTAGACATATGTATCT 57.895 33.333 8.71 5.31 0.00 1.98
290 291 9.376075 CTCCATTGGATTGTAGACATATGTATC 57.624 37.037 8.71 7.62 0.00 2.24
291 292 8.884323 ACTCCATTGGATTGTAGACATATGTAT 58.116 33.333 8.71 8.47 0.00 2.29
292 293 8.262601 ACTCCATTGGATTGTAGACATATGTA 57.737 34.615 8.71 0.00 0.00 2.29
293 294 7.141758 ACTCCATTGGATTGTAGACATATGT 57.858 36.000 8.43 8.43 0.00 2.29
294 295 8.347771 CAAACTCCATTGGATTGTAGACATATG 58.652 37.037 5.70 0.00 0.00 1.78
295 296 8.055181 ACAAACTCCATTGGATTGTAGACATAT 58.945 33.333 18.75 0.00 34.41 1.78
296 297 7.402054 ACAAACTCCATTGGATTGTAGACATA 58.598 34.615 18.75 0.00 34.41 2.29
297 298 6.248433 ACAAACTCCATTGGATTGTAGACAT 58.752 36.000 18.75 0.00 34.41 3.06
298 299 5.630121 ACAAACTCCATTGGATTGTAGACA 58.370 37.500 18.75 0.00 34.41 3.41
299 300 6.575162 AACAAACTCCATTGGATTGTAGAC 57.425 37.500 19.94 0.00 34.89 2.59
300 301 8.698973 TTAAACAAACTCCATTGGATTGTAGA 57.301 30.769 19.94 11.31 34.89 2.59
301 302 9.927668 ATTTAAACAAACTCCATTGGATTGTAG 57.072 29.630 19.94 6.29 34.89 2.74
302 303 9.921637 GATTTAAACAAACTCCATTGGATTGTA 57.078 29.630 19.94 9.04 34.89 2.41
303 304 7.877612 GGATTTAAACAAACTCCATTGGATTGT 59.122 33.333 15.79 15.79 36.75 2.71
304 305 7.877097 TGGATTTAAACAAACTCCATTGGATTG 59.123 33.333 14.71 14.71 34.56 2.67
305 306 7.972301 TGGATTTAAACAAACTCCATTGGATT 58.028 30.769 5.70 0.00 34.56 3.01
306 307 7.552050 TGGATTTAAACAAACTCCATTGGAT 57.448 32.000 5.70 0.00 34.56 3.41
307 308 6.985653 TGGATTTAAACAAACTCCATTGGA 57.014 33.333 5.05 5.05 34.56 3.53
308 309 8.620116 AATTGGATTTAAACAAACTCCATTGG 57.380 30.769 8.03 0.00 35.99 3.16
310 311 9.283768 GGAAATTGGATTTAAACAAACTCCATT 57.716 29.630 8.03 3.23 35.99 3.16
311 312 8.435982 TGGAAATTGGATTTAAACAAACTCCAT 58.564 29.630 8.03 0.00 36.91 3.41
312 313 7.796054 TGGAAATTGGATTTAAACAAACTCCA 58.204 30.769 14.59 14.59 38.24 3.86
313 314 8.846943 ATGGAAATTGGATTTAAACAAACTCC 57.153 30.769 11.55 11.55 34.50 3.85
314 315 9.710900 AGATGGAAATTGGATTTAAACAAACTC 57.289 29.630 0.00 0.00 31.47 3.01
347 348 9.082313 ACCATCAATTTGTCAAGTAAATTCTCT 57.918 29.630 0.00 0.00 36.02 3.10
350 351 9.076596 GCTACCATCAATTTGTCAAGTAAATTC 57.923 33.333 0.00 0.00 36.02 2.17
351 352 8.584157 TGCTACCATCAATTTGTCAAGTAAATT 58.416 29.630 0.00 0.00 38.02 1.82
352 353 8.028938 GTGCTACCATCAATTTGTCAAGTAAAT 58.971 33.333 0.00 0.00 0.00 1.40
353 354 7.367285 GTGCTACCATCAATTTGTCAAGTAAA 58.633 34.615 0.00 0.00 0.00 2.01
354 355 6.072175 GGTGCTACCATCAATTTGTCAAGTAA 60.072 38.462 0.00 0.00 38.42 2.24
355 356 5.414454 GGTGCTACCATCAATTTGTCAAGTA 59.586 40.000 0.00 0.00 38.42 2.24
356 357 4.218417 GGTGCTACCATCAATTTGTCAAGT 59.782 41.667 0.00 0.00 38.42 3.16
357 358 4.218200 TGGTGCTACCATCAATTTGTCAAG 59.782 41.667 4.16 0.00 44.79 3.02
358 359 4.148079 TGGTGCTACCATCAATTTGTCAA 58.852 39.130 4.16 0.00 44.79 3.18
359 360 3.760738 TGGTGCTACCATCAATTTGTCA 58.239 40.909 4.16 0.00 44.79 3.58
371 372 0.108138 CCAGTGCTAGTGGTGCTACC 60.108 60.000 0.00 0.00 39.22 3.18
372 373 0.108138 CCCAGTGCTAGTGGTGCTAC 60.108 60.000 8.58 0.00 36.97 3.58
373 374 1.899437 GCCCAGTGCTAGTGGTGCTA 61.899 60.000 8.58 0.00 36.97 3.49
374 375 3.072476 CCCAGTGCTAGTGGTGCT 58.928 61.111 8.58 0.00 36.97 4.40
375 376 2.747855 GCCCAGTGCTAGTGGTGC 60.748 66.667 8.58 7.88 36.97 5.01
384 385 4.322080 AAGTCTTTAAAAAGCCCAGTGC 57.678 40.909 0.00 0.00 41.71 4.40
385 386 5.519927 CACAAAGTCTTTAAAAAGCCCAGTG 59.480 40.000 0.00 0.00 35.99 3.66
386 387 5.395214 CCACAAAGTCTTTAAAAAGCCCAGT 60.395 40.000 0.00 0.00 35.99 4.00
387 388 5.049828 CCACAAAGTCTTTAAAAAGCCCAG 58.950 41.667 0.00 0.00 35.99 4.45
388 389 4.712337 TCCACAAAGTCTTTAAAAAGCCCA 59.288 37.500 0.00 0.00 35.99 5.36
389 390 5.270893 TCCACAAAGTCTTTAAAAAGCCC 57.729 39.130 0.00 0.00 35.99 5.19
390 391 5.163447 ACCTCCACAAAGTCTTTAAAAAGCC 60.163 40.000 0.00 0.00 35.99 4.35
391 392 5.902681 ACCTCCACAAAGTCTTTAAAAAGC 58.097 37.500 0.00 0.00 35.99 3.51
392 393 6.255670 GCAACCTCCACAAAGTCTTTAAAAAG 59.744 38.462 0.00 0.00 37.36 2.27
393 394 6.071051 AGCAACCTCCACAAAGTCTTTAAAAA 60.071 34.615 0.00 0.00 0.00 1.94
394 395 5.420739 AGCAACCTCCACAAAGTCTTTAAAA 59.579 36.000 0.00 0.00 0.00 1.52
395 396 4.953579 AGCAACCTCCACAAAGTCTTTAAA 59.046 37.500 0.00 0.00 0.00 1.52
396 397 4.532834 AGCAACCTCCACAAAGTCTTTAA 58.467 39.130 0.00 0.00 0.00 1.52
397 398 4.164843 AGCAACCTCCACAAAGTCTTTA 57.835 40.909 0.00 0.00 0.00 1.85
398 399 3.018423 AGCAACCTCCACAAAGTCTTT 57.982 42.857 0.00 0.00 0.00 2.52
399 400 2.736670 AGCAACCTCCACAAAGTCTT 57.263 45.000 0.00 0.00 0.00 3.01
400 401 2.224548 GGTAGCAACCTCCACAAAGTCT 60.225 50.000 0.00 0.00 43.08 3.24
401 402 2.152016 GGTAGCAACCTCCACAAAGTC 58.848 52.381 0.00 0.00 43.08 3.01
402 403 1.542547 CGGTAGCAACCTCCACAAAGT 60.543 52.381 0.00 0.00 44.35 2.66
403 404 1.156736 CGGTAGCAACCTCCACAAAG 58.843 55.000 0.00 0.00 44.35 2.77
404 405 0.470766 ACGGTAGCAACCTCCACAAA 59.529 50.000 0.00 0.00 44.35 2.83
405 406 0.250124 CACGGTAGCAACCTCCACAA 60.250 55.000 0.00 0.00 44.35 3.33
406 407 1.369692 CACGGTAGCAACCTCCACA 59.630 57.895 0.00 0.00 44.35 4.17
407 408 2.033194 GCACGGTAGCAACCTCCAC 61.033 63.158 0.00 0.00 44.35 4.02
408 409 2.345991 GCACGGTAGCAACCTCCA 59.654 61.111 0.00 0.00 44.35 3.86
409 410 2.573609 ATCGCACGGTAGCAACCTCC 62.574 60.000 0.00 0.00 44.35 4.30
410 411 1.153628 ATCGCACGGTAGCAACCTC 60.154 57.895 0.00 0.00 44.35 3.85
411 412 1.447838 CATCGCACGGTAGCAACCT 60.448 57.895 0.00 0.00 44.35 3.50
412 413 2.461110 CCATCGCACGGTAGCAACC 61.461 63.158 0.00 0.00 42.95 3.77
413 414 0.458889 TACCATCGCACGGTAGCAAC 60.459 55.000 0.00 0.00 37.99 4.17
414 415 0.462375 ATACCATCGCACGGTAGCAA 59.538 50.000 2.74 0.00 42.19 3.91
415 416 1.268625 CTATACCATCGCACGGTAGCA 59.731 52.381 2.74 0.00 42.19 3.49
416 417 1.978542 CTATACCATCGCACGGTAGC 58.021 55.000 2.74 0.00 42.19 3.58
417 418 1.728179 CGCTATACCATCGCACGGTAG 60.728 57.143 2.74 0.00 42.19 3.18
418 419 0.239082 CGCTATACCATCGCACGGTA 59.761 55.000 0.00 0.00 43.06 4.02
419 420 1.007734 CGCTATACCATCGCACGGT 60.008 57.895 0.00 0.00 40.73 4.83
420 421 1.733041 CCGCTATACCATCGCACGG 60.733 63.158 0.00 0.00 0.00 4.94
421 422 0.239082 TACCGCTATACCATCGCACG 59.761 55.000 0.00 0.00 0.00 5.34
422 423 1.978542 CTACCGCTATACCATCGCAC 58.021 55.000 0.00 0.00 0.00 5.34
423 424 0.242825 GCTACCGCTATACCATCGCA 59.757 55.000 0.00 0.00 0.00 5.10
424 425 0.797249 CGCTACCGCTATACCATCGC 60.797 60.000 0.00 0.00 0.00 4.58
425 426 3.307829 CGCTACCGCTATACCATCG 57.692 57.895 0.00 0.00 0.00 3.84
436 437 3.760035 ACACCTCAGGCGCTACCG 61.760 66.667 7.64 0.00 46.52 4.02
437 438 2.125512 CACACCTCAGGCGCTACC 60.126 66.667 7.64 0.00 39.61 3.18
438 439 2.125512 CCACACCTCAGGCGCTAC 60.126 66.667 7.64 0.00 0.00 3.58
439 440 1.764571 AAACCACACCTCAGGCGCTA 61.765 55.000 7.64 0.00 0.00 4.26
440 441 3.120086 AAACCACACCTCAGGCGCT 62.120 57.895 7.64 0.00 0.00 5.92
441 442 2.594592 AAACCACACCTCAGGCGC 60.595 61.111 0.00 0.00 0.00 6.53
442 443 1.227823 TGAAACCACACCTCAGGCG 60.228 57.895 0.00 0.00 0.00 5.52
443 444 2.331265 GTGAAACCACACCTCAGGC 58.669 57.895 0.00 0.00 35.07 4.85
470 471 2.435410 GTGGAGTTTACCGGGGCG 60.435 66.667 6.32 0.00 0.00 6.13
471 472 2.435410 CGTGGAGTTTACCGGGGC 60.435 66.667 6.32 0.00 0.00 5.80
472 473 1.217244 CTCGTGGAGTTTACCGGGG 59.783 63.158 6.32 0.00 0.00 5.73
473 474 1.217244 CCTCGTGGAGTTTACCGGG 59.783 63.158 6.32 0.00 34.57 5.73
474 475 1.447314 GCCTCGTGGAGTTTACCGG 60.447 63.158 7.92 0.00 34.57 5.28
475 476 1.447314 GGCCTCGTGGAGTTTACCG 60.447 63.158 7.92 0.00 34.57 4.02
476 477 1.447314 CGGCCTCGTGGAGTTTACC 60.447 63.158 7.92 0.00 34.57 2.85
477 478 2.098831 GCGGCCTCGTGGAGTTTAC 61.099 63.158 7.92 0.00 38.89 2.01
478 479 2.102109 TTGCGGCCTCGTGGAGTTTA 62.102 55.000 7.92 0.00 38.89 2.01
479 480 2.951475 TTTGCGGCCTCGTGGAGTTT 62.951 55.000 7.92 0.00 38.89 2.66
480 481 2.748058 ATTTGCGGCCTCGTGGAGTT 62.748 55.000 7.92 0.00 38.89 3.01
481 482 3.254024 ATTTGCGGCCTCGTGGAGT 62.254 57.895 7.92 0.00 38.89 3.85
482 483 2.436646 ATTTGCGGCCTCGTGGAG 60.437 61.111 7.92 1.27 38.89 3.86
483 484 1.609635 TAGATTTGCGGCCTCGTGGA 61.610 55.000 7.92 0.00 38.89 4.02
484 485 0.532862 ATAGATTTGCGGCCTCGTGG 60.533 55.000 0.00 0.00 38.89 4.94
485 486 1.299541 AATAGATTTGCGGCCTCGTG 58.700 50.000 0.00 0.00 38.89 4.35
486 487 1.670811 CAAATAGATTTGCGGCCTCGT 59.329 47.619 0.00 0.00 40.42 4.18
487 488 2.389713 CAAATAGATTTGCGGCCTCG 57.610 50.000 0.00 0.00 40.42 4.63
496 497 6.207417 CCGAATATCCAGTGGCAAATAGATTT 59.793 38.462 3.51 0.00 0.00 2.17
497 498 5.707298 CCGAATATCCAGTGGCAAATAGATT 59.293 40.000 3.51 0.00 0.00 2.40
498 499 5.248640 CCGAATATCCAGTGGCAAATAGAT 58.751 41.667 3.51 0.00 0.00 1.98
499 500 4.641396 CCGAATATCCAGTGGCAAATAGA 58.359 43.478 3.51 0.00 0.00 1.98
500 501 3.189287 GCCGAATATCCAGTGGCAAATAG 59.811 47.826 3.51 0.00 45.06 1.73
501 502 3.146066 GCCGAATATCCAGTGGCAAATA 58.854 45.455 3.51 0.00 45.06 1.40
502 503 1.956477 GCCGAATATCCAGTGGCAAAT 59.044 47.619 3.51 0.00 45.06 2.32
503 504 1.388547 GCCGAATATCCAGTGGCAAA 58.611 50.000 3.51 0.00 45.06 3.68
504 505 3.094386 GCCGAATATCCAGTGGCAA 57.906 52.632 3.51 0.00 45.06 4.52
505 506 4.876701 GCCGAATATCCAGTGGCA 57.123 55.556 3.51 0.00 45.06 4.92
506 507 1.600916 GGGCCGAATATCCAGTGGC 60.601 63.158 3.51 0.00 44.98 5.01
507 508 1.301716 CGGGCCGAATATCCAGTGG 60.302 63.158 24.41 1.40 0.00 4.00
508 509 0.319900 CTCGGGCCGAATATCCAGTG 60.320 60.000 30.59 10.96 34.74 3.66
509 510 0.759436 ACTCGGGCCGAATATCCAGT 60.759 55.000 30.59 18.99 34.74 4.00
510 511 0.319900 CACTCGGGCCGAATATCCAG 60.320 60.000 30.59 18.29 34.74 3.86
511 512 0.757561 TCACTCGGGCCGAATATCCA 60.758 55.000 30.59 5.46 34.74 3.41
512 513 0.608640 ATCACTCGGGCCGAATATCC 59.391 55.000 30.59 0.00 34.74 2.59
513 514 1.272490 TCATCACTCGGGCCGAATATC 59.728 52.381 30.59 0.00 34.74 1.63
514 515 1.000955 GTCATCACTCGGGCCGAATAT 59.999 52.381 30.59 19.35 34.74 1.28
515 516 0.387929 GTCATCACTCGGGCCGAATA 59.612 55.000 30.59 17.90 34.74 1.75
516 517 1.144057 GTCATCACTCGGGCCGAAT 59.856 57.895 30.59 19.06 34.74 3.34
517 518 2.577059 GTCATCACTCGGGCCGAA 59.423 61.111 30.59 16.27 34.74 4.30
518 519 3.458163 GGTCATCACTCGGGCCGA 61.458 66.667 29.14 29.14 0.00 5.54
519 520 2.593468 ATTGGTCATCACTCGGGCCG 62.593 60.000 22.51 22.51 0.00 6.13
520 521 1.097547 CATTGGTCATCACTCGGGCC 61.098 60.000 0.00 0.00 0.00 5.80
521 522 0.392998 ACATTGGTCATCACTCGGGC 60.393 55.000 0.00 0.00 0.00 6.13
522 523 1.656652 GACATTGGTCATCACTCGGG 58.343 55.000 0.00 0.00 43.73 5.14
523 524 1.280982 CGACATTGGTCATCACTCGG 58.719 55.000 0.00 0.00 44.54 4.63
524 525 0.647410 GCGACATTGGTCATCACTCG 59.353 55.000 0.00 0.00 44.54 4.18
525 526 2.015736 AGCGACATTGGTCATCACTC 57.984 50.000 0.00 0.00 44.54 3.51
526 527 2.079158 CAAGCGACATTGGTCATCACT 58.921 47.619 0.00 0.00 44.54 3.41
527 528 1.806542 ACAAGCGACATTGGTCATCAC 59.193 47.619 0.00 0.00 44.54 3.06
528 529 1.805943 CACAAGCGACATTGGTCATCA 59.194 47.619 0.00 0.00 44.54 3.07
529 530 1.131126 CCACAAGCGACATTGGTCATC 59.869 52.381 0.00 0.00 44.54 2.92
530 531 1.167851 CCACAAGCGACATTGGTCAT 58.832 50.000 0.00 0.00 44.54 3.06
531 532 0.888736 CCCACAAGCGACATTGGTCA 60.889 55.000 0.00 0.00 44.54 4.02
532 533 0.605319 TCCCACAAGCGACATTGGTC 60.605 55.000 0.00 0.00 40.77 4.02
533 534 0.038166 ATCCCACAAGCGACATTGGT 59.962 50.000 0.00 0.00 34.36 3.67
534 535 0.452987 CATCCCACAAGCGACATTGG 59.547 55.000 0.00 0.00 34.36 3.16
535 536 1.452110 TCATCCCACAAGCGACATTG 58.548 50.000 0.00 0.00 36.22 2.82
536 537 2.019249 CATCATCCCACAAGCGACATT 58.981 47.619 0.00 0.00 0.00 2.71
537 538 1.210234 TCATCATCCCACAAGCGACAT 59.790 47.619 0.00 0.00 0.00 3.06
538 539 0.612744 TCATCATCCCACAAGCGACA 59.387 50.000 0.00 0.00 0.00 4.35
539 540 1.009829 GTCATCATCCCACAAGCGAC 58.990 55.000 0.00 0.00 0.00 5.19
540 541 0.612744 TGTCATCATCCCACAAGCGA 59.387 50.000 0.00 0.00 0.00 4.93
541 542 1.332686 CATGTCATCATCCCACAAGCG 59.667 52.381 0.00 0.00 31.15 4.68
542 543 2.098607 CACATGTCATCATCCCACAAGC 59.901 50.000 0.00 0.00 31.15 4.01
543 544 3.349927 ACACATGTCATCATCCCACAAG 58.650 45.455 0.00 0.00 31.15 3.16
544 545 3.438216 ACACATGTCATCATCCCACAA 57.562 42.857 0.00 0.00 31.15 3.33
545 546 4.566426 TTACACATGTCATCATCCCACA 57.434 40.909 0.00 0.00 31.15 4.17
546 547 5.895636 TTTTACACATGTCATCATCCCAC 57.104 39.130 0.00 0.00 31.15 4.61
547 548 5.593909 GGATTTTACACATGTCATCATCCCA 59.406 40.000 0.00 0.00 31.15 4.37
548 549 5.593909 TGGATTTTACACATGTCATCATCCC 59.406 40.000 14.02 5.61 31.15 3.85
549 550 6.698008 TGGATTTTACACATGTCATCATCC 57.302 37.500 0.00 4.62 31.15 3.51
550 551 9.027129 CAAATGGATTTTACACATGTCATCATC 57.973 33.333 0.00 0.00 31.15 2.92
551 552 7.493320 GCAAATGGATTTTACACATGTCATCAT 59.507 33.333 0.00 0.00 34.21 2.45
552 553 6.812656 GCAAATGGATTTTACACATGTCATCA 59.187 34.615 0.00 0.00 0.00 3.07
553 554 6.256321 GGCAAATGGATTTTACACATGTCATC 59.744 38.462 0.00 0.00 0.00 2.92
554 555 6.108015 GGCAAATGGATTTTACACATGTCAT 58.892 36.000 0.00 0.00 0.00 3.06
555 556 5.011431 TGGCAAATGGATTTTACACATGTCA 59.989 36.000 0.00 0.00 0.00 3.58
556 557 5.348451 GTGGCAAATGGATTTTACACATGTC 59.652 40.000 0.00 0.00 35.55 3.06
557 558 5.011943 AGTGGCAAATGGATTTTACACATGT 59.988 36.000 13.95 0.00 36.79 3.21
558 559 5.481105 AGTGGCAAATGGATTTTACACATG 58.519 37.500 13.95 0.00 36.79 3.21
559 560 5.481473 AGAGTGGCAAATGGATTTTACACAT 59.519 36.000 13.95 0.00 36.79 3.21
560 561 4.832266 AGAGTGGCAAATGGATTTTACACA 59.168 37.500 13.95 0.00 36.79 3.72
561 562 5.391312 AGAGTGGCAAATGGATTTTACAC 57.609 39.130 0.00 7.41 35.63 2.90
562 563 4.155826 CGAGAGTGGCAAATGGATTTTACA 59.844 41.667 0.00 0.00 0.00 2.41
563 564 4.438744 CCGAGAGTGGCAAATGGATTTTAC 60.439 45.833 0.00 0.00 0.00 2.01
564 565 3.694072 CCGAGAGTGGCAAATGGATTTTA 59.306 43.478 0.00 0.00 0.00 1.52
565 566 2.493278 CCGAGAGTGGCAAATGGATTTT 59.507 45.455 0.00 0.00 0.00 1.82
566 567 2.094675 CCGAGAGTGGCAAATGGATTT 58.905 47.619 0.00 0.00 0.00 2.17
567 568 1.281867 TCCGAGAGTGGCAAATGGATT 59.718 47.619 0.00 0.00 0.00 3.01
568 569 0.911769 TCCGAGAGTGGCAAATGGAT 59.088 50.000 0.00 0.00 0.00 3.41
569 570 0.911769 ATCCGAGAGTGGCAAATGGA 59.088 50.000 0.00 0.00 0.00 3.41
570 571 1.019673 CATCCGAGAGTGGCAAATGG 58.980 55.000 0.00 0.00 0.00 3.16
571 572 1.742761 ACATCCGAGAGTGGCAAATG 58.257 50.000 0.00 0.00 0.00 2.32
572 573 2.496899 AACATCCGAGAGTGGCAAAT 57.503 45.000 0.00 0.00 0.00 2.32
573 574 2.270352 AAACATCCGAGAGTGGCAAA 57.730 45.000 0.00 0.00 0.00 3.68
574 575 2.270352 AAAACATCCGAGAGTGGCAA 57.730 45.000 0.00 0.00 0.00 4.52
575 576 2.270352 AAAAACATCCGAGAGTGGCA 57.730 45.000 0.00 0.00 0.00 4.92
605 606 1.663643 TCTCAACTGAACGTGCACAAC 59.336 47.619 18.64 7.77 0.00 3.32
606 607 1.933181 CTCTCAACTGAACGTGCACAA 59.067 47.619 18.64 0.00 0.00 3.33
607 608 1.570813 CTCTCAACTGAACGTGCACA 58.429 50.000 18.64 0.00 0.00 4.57
608 609 0.233332 GCTCTCAACTGAACGTGCAC 59.767 55.000 6.82 6.82 0.00 4.57
654 655 2.601067 CAGCACCCCAATGTGGCA 60.601 61.111 0.00 0.00 35.79 4.92
670 671 2.347114 CACCGACCACCATGAGCA 59.653 61.111 0.00 0.00 0.00 4.26
694 695 9.330578 TGTTCACCAATAGAATGGGAACAGAGT 62.331 40.741 18.21 0.00 45.38 3.24
808 811 2.882777 CGTCGGTGCAGCTAGCTG 60.883 66.667 35.54 35.54 45.94 4.24
812 815 3.716539 GATGGCGTCGGTGCAGCTA 62.717 63.158 14.92 0.00 36.28 3.32
818 835 0.385751 AGATAGTGATGGCGTCGGTG 59.614 55.000 1.67 0.00 0.00 4.94
854 871 0.099968 CAATGTGCGGCCATGAGAAG 59.900 55.000 2.24 0.00 0.00 2.85
856 873 1.002257 ACAATGTGCGGCCATGAGA 60.002 52.632 2.24 0.00 0.00 3.27
858 875 1.303155 TGACAATGTGCGGCCATGA 60.303 52.632 2.24 0.00 0.00 3.07
860 877 1.303561 AGTGACAATGTGCGGCCAT 60.304 52.632 2.24 0.00 0.00 4.40
861 878 2.112928 AGTGACAATGTGCGGCCA 59.887 55.556 2.24 0.00 0.00 5.36
866 883 1.589716 GCCCTCCAGTGACAATGTGC 61.590 60.000 1.77 0.00 0.00 4.57
895 912 3.058160 AAGCGTGCCATGCCTGTC 61.058 61.111 5.02 0.00 0.00 3.51
896 913 3.367743 CAAGCGTGCCATGCCTGT 61.368 61.111 5.02 0.00 0.00 4.00
897 914 4.124351 CCAAGCGTGCCATGCCTG 62.124 66.667 5.02 2.50 0.00 4.85
909 927 3.357079 CAGTGGGTCACGCCAAGC 61.357 66.667 0.00 0.00 39.64 4.01
927 945 3.543665 AGGAGTAGCTAGTGTCGGTTAG 58.456 50.000 5.62 0.00 0.00 2.34
940 958 3.504520 GGATGCAGACTAGTAGGAGTAGC 59.495 52.174 0.00 0.00 33.43 3.58
953 974 1.134250 GGGAAAGGAGAGGATGCAGAC 60.134 57.143 0.00 0.00 0.00 3.51
969 990 0.253583 TGGATGGAGGATGTGGGGAA 60.254 55.000 0.00 0.00 0.00 3.97
975 998 2.094100 ACGAGATGGATGGAGGATGT 57.906 50.000 0.00 0.00 0.00 3.06
993 1024 2.804931 GCGGACGCCATTGCAAAC 60.805 61.111 1.71 0.00 37.32 2.93
1015 1046 2.601868 GAGGAGAGGGGGAGCGTA 59.398 66.667 0.00 0.00 0.00 4.42
1016 1047 4.467107 GGAGGAGAGGGGGAGCGT 62.467 72.222 0.00 0.00 0.00 5.07
1122 1162 3.133362 AGTTTGGTCAGTTTACCGTGAGA 59.867 43.478 0.00 0.00 42.91 3.27
1133 1173 1.597663 CGCGAGAAAAGTTTGGTCAGT 59.402 47.619 0.00 0.00 0.00 3.41
1134 1174 1.660333 GCGCGAGAAAAGTTTGGTCAG 60.660 52.381 12.10 0.00 0.00 3.51
1160 1200 2.104963 AGAAACTGGGAGTTGACTCACC 59.895 50.000 10.68 10.35 45.64 4.02
1186 1243 1.446099 TCACGCAACAGATCGAGGC 60.446 57.895 0.00 0.00 0.00 4.70
1187 1244 1.406219 CGTCACGCAACAGATCGAGG 61.406 60.000 0.00 0.00 0.00 4.63
1188 1245 0.454452 TCGTCACGCAACAGATCGAG 60.454 55.000 0.00 0.00 0.00 4.04
1190 1247 0.992072 ATTCGTCACGCAACAGATCG 59.008 50.000 0.00 0.00 0.00 3.69
1191 1248 1.992667 TGATTCGTCACGCAACAGATC 59.007 47.619 0.00 0.00 0.00 2.75
1192 1249 1.995484 CTGATTCGTCACGCAACAGAT 59.005 47.619 0.78 0.00 0.00 2.90
1193 1250 1.269569 ACTGATTCGTCACGCAACAGA 60.270 47.619 13.69 0.00 0.00 3.41
1194 1251 1.139989 ACTGATTCGTCACGCAACAG 58.860 50.000 5.59 5.59 0.00 3.16
1195 1252 2.324860 CTACTGATTCGTCACGCAACA 58.675 47.619 0.00 0.00 0.00 3.33
1196 1253 1.059264 GCTACTGATTCGTCACGCAAC 59.941 52.381 0.00 0.00 0.00 4.17
1197 1254 1.067846 AGCTACTGATTCGTCACGCAA 60.068 47.619 0.00 0.00 0.00 4.85
1198 1255 0.526211 AGCTACTGATTCGTCACGCA 59.474 50.000 0.00 0.00 0.00 5.24
1199 1256 2.110226 GTAGCTACTGATTCGTCACGC 58.890 52.381 16.88 0.00 0.00 5.34
1200 1257 2.717530 GGTAGCTACTGATTCGTCACG 58.282 52.381 22.74 0.00 0.00 4.35
1201 1258 2.541178 CCGGTAGCTACTGATTCGTCAC 60.541 54.545 30.44 6.81 34.49 3.67
1202 1259 1.674441 CCGGTAGCTACTGATTCGTCA 59.326 52.381 30.44 0.00 34.49 4.35
1203 1260 1.674962 ACCGGTAGCTACTGATTCGTC 59.325 52.381 30.44 8.18 34.49 4.20
1204 1261 1.760192 ACCGGTAGCTACTGATTCGT 58.240 50.000 30.44 18.04 34.49 3.85
1205 1262 2.865343 AACCGGTAGCTACTGATTCG 57.135 50.000 30.44 20.32 34.49 3.34
1206 1263 4.644103 TGTAACCGGTAGCTACTGATTC 57.356 45.455 30.44 17.54 34.49 2.52
1273 1341 1.456165 GAACCGAACACGAAGAGAAGC 59.544 52.381 0.00 0.00 0.00 3.86
1274 1342 2.739292 TGAACCGAACACGAAGAGAAG 58.261 47.619 0.00 0.00 0.00 2.85
1275 1343 2.875087 TGAACCGAACACGAAGAGAA 57.125 45.000 0.00 0.00 0.00 2.87
1276 1344 3.380479 AATGAACCGAACACGAAGAGA 57.620 42.857 0.00 0.00 0.00 3.10
1277 1345 5.779806 AATAATGAACCGAACACGAAGAG 57.220 39.130 0.00 0.00 0.00 2.85
1278 1346 6.869913 ACTAAATAATGAACCGAACACGAAGA 59.130 34.615 0.00 0.00 0.00 2.87
1279 1347 7.057149 ACTAAATAATGAACCGAACACGAAG 57.943 36.000 0.00 0.00 0.00 3.79
1280 1348 6.869913 AGACTAAATAATGAACCGAACACGAA 59.130 34.615 0.00 0.00 0.00 3.85
1283 1351 8.252964 AGAAGACTAAATAATGAACCGAACAC 57.747 34.615 0.00 0.00 0.00 3.32
1284 1352 8.842358 AAGAAGACTAAATAATGAACCGAACA 57.158 30.769 0.00 0.00 0.00 3.18
1285 1353 9.152595 AGAAGAAGACTAAATAATGAACCGAAC 57.847 33.333 0.00 0.00 0.00 3.95
1286 1354 9.720769 AAGAAGAAGACTAAATAATGAACCGAA 57.279 29.630 0.00 0.00 0.00 4.30
1288 1356 7.905493 GCAAGAAGAAGACTAAATAATGAACCG 59.095 37.037 0.00 0.00 0.00 4.44
1298 1373 9.965824 CCTTTTTATTGCAAGAAGAAGACTAAA 57.034 29.630 28.74 14.87 0.00 1.85
1302 1377 8.299570 TCATCCTTTTTATTGCAAGAAGAAGAC 58.700 33.333 28.74 0.00 0.00 3.01
1408 1526 3.806521 AGAGCGTGAATTAATAGCAGCAG 59.193 43.478 0.00 0.00 0.00 4.24
1413 1531 5.859648 GGTAGAGAGAGCGTGAATTAATAGC 59.140 44.000 0.00 0.00 0.00 2.97
1422 1540 1.134340 GGAGAGGTAGAGAGAGCGTGA 60.134 57.143 0.00 0.00 0.00 4.35
1471 1589 2.502068 TGGGTGATGGAGATGGAGAT 57.498 50.000 0.00 0.00 0.00 2.75
1483 1601 1.837252 TGGATGGATGGATGGGTGAT 58.163 50.000 0.00 0.00 0.00 3.06
1486 1604 1.078955 GGATGGATGGATGGATGGGT 58.921 55.000 0.00 0.00 0.00 4.51
1487 1605 1.078115 TGGATGGATGGATGGATGGG 58.922 55.000 0.00 0.00 0.00 4.00
1488 1606 2.735151 CATGGATGGATGGATGGATGG 58.265 52.381 0.00 0.00 0.00 3.51
1537 1669 1.282930 GACAACAAGGAGGACGACGC 61.283 60.000 0.00 0.00 0.00 5.19
1550 1682 3.923864 ACGAGCAGGGCGACAACA 61.924 61.111 0.00 0.00 0.00 3.33
1618 1750 4.942761 AACATTGGTTCAGAGCAAATGT 57.057 36.364 13.03 13.03 45.40 2.71
1633 1765 3.059597 GCATCTCCGGATTCGTAACATTG 60.060 47.826 3.57 0.00 33.95 2.82
1634 1766 3.131396 GCATCTCCGGATTCGTAACATT 58.869 45.455 3.57 0.00 33.95 2.71
1645 1777 0.179111 CAAGCTAACGCATCTCCGGA 60.179 55.000 2.93 2.93 39.10 5.14
1648 1780 5.335827 CTTAATCAAGCTAACGCATCTCC 57.664 43.478 0.00 0.00 39.10 3.71
1670 1806 2.285488 GCGCAGGAAGTGATTAGTTAGC 59.715 50.000 0.30 0.00 0.00 3.09
1675 1811 2.478134 GCTATGCGCAGGAAGTGATTAG 59.522 50.000 18.32 10.35 38.92 1.73
1701 1840 8.882736 CCAACTTAAAGCAAGAAACTTTCATTT 58.117 29.630 4.34 2.89 38.31 2.32
1723 1862 0.249911 AACAGAGCGTGGAGACCAAC 60.250 55.000 0.00 0.00 34.18 3.77
1725 1864 1.112916 TCAACAGAGCGTGGAGACCA 61.113 55.000 0.00 0.00 0.00 4.02
1768 1907 2.303022 ACAGGGGTAGGCATATGAATCG 59.697 50.000 6.97 0.00 0.00 3.34
1770 1909 4.814224 AAACAGGGGTAGGCATATGAAT 57.186 40.909 6.97 0.00 0.00 2.57
1773 1912 6.976934 AATTTAAACAGGGGTAGGCATATG 57.023 37.500 0.00 0.00 0.00 1.78
1798 1937 6.423042 CGGAAGAAGAAGAAGACAAAGAAAC 58.577 40.000 0.00 0.00 0.00 2.78
1803 1942 3.804036 TGCGGAAGAAGAAGAAGACAAA 58.196 40.909 0.00 0.00 0.00 2.83
1805 1948 3.131396 GTTGCGGAAGAAGAAGAAGACA 58.869 45.455 0.00 0.00 0.00 3.41
1806 1949 2.480802 GGTTGCGGAAGAAGAAGAAGAC 59.519 50.000 0.00 0.00 0.00 3.01
1816 1959 2.286365 AAATTCAGGGTTGCGGAAGA 57.714 45.000 0.00 0.00 0.00 2.87
1817 1960 3.081804 AGTAAATTCAGGGTTGCGGAAG 58.918 45.455 0.00 0.00 0.00 3.46
1818 1961 3.149005 AGTAAATTCAGGGTTGCGGAA 57.851 42.857 0.00 0.00 0.00 4.30
1821 1964 2.739913 TCGAAGTAAATTCAGGGTTGCG 59.260 45.455 0.00 0.00 37.83 4.85
1828 1971 6.943981 TGAAACTGTGTCGAAGTAAATTCAG 58.056 36.000 0.00 0.00 37.83 3.02
1841 1984 4.380531 TCTTCATGGTCTGAAACTGTGTC 58.619 43.478 0.00 0.00 43.20 3.67
1920 2063 2.482316 GCCTGCACCGTATACATGTGTA 60.482 50.000 18.54 14.92 34.67 2.90
1922 2065 0.937304 GCCTGCACCGTATACATGTG 59.063 55.000 9.11 14.99 0.00 3.21
2014 2177 2.808543 GCACATCTCGTTCTTCCAGTTT 59.191 45.455 0.00 0.00 0.00 2.66
2169 2332 5.178797 TGAGGAGTGCTTCATTAGTTTAGC 58.821 41.667 0.00 0.00 0.00 3.09
2174 2337 3.054875 TGCATGAGGAGTGCTTCATTAGT 60.055 43.478 0.00 0.00 38.62 2.24
2179 2342 1.612462 CCTTGCATGAGGAGTGCTTCA 60.612 52.381 0.00 0.00 42.92 3.02
2180 2343 1.093159 CCTTGCATGAGGAGTGCTTC 58.907 55.000 0.00 0.00 42.92 3.86
2181 2344 0.403271 ACCTTGCATGAGGAGTGCTT 59.597 50.000 11.52 0.00 42.92 3.91
2183 2346 1.310933 CCACCTTGCATGAGGAGTGC 61.311 60.000 11.52 0.00 39.25 4.40
2184 2347 0.679002 CCCACCTTGCATGAGGAGTG 60.679 60.000 11.52 5.72 39.25 3.51
2185 2348 1.687612 CCCACCTTGCATGAGGAGT 59.312 57.895 11.52 0.00 39.25 3.85
2186 2349 1.751927 GCCCACCTTGCATGAGGAG 60.752 63.158 11.52 3.21 39.25 3.69
2187 2350 0.913934 TAGCCCACCTTGCATGAGGA 60.914 55.000 11.52 0.00 39.25 3.71
2188 2351 0.034186 TTAGCCCACCTTGCATGAGG 60.034 55.000 2.71 2.71 42.75 3.86
2190 2353 2.300956 TTTTAGCCCACCTTGCATGA 57.699 45.000 0.00 0.00 0.00 3.07
2218 2393 2.237143 GGCGGAGATATTGATGGATGGA 59.763 50.000 0.00 0.00 0.00 3.41
2251 2432 2.877097 TGGCAGGCTAAGATGAACAA 57.123 45.000 0.00 0.00 0.00 2.83
2354 2539 1.082879 TCCTCCTCCCTTTCCCTTCAT 59.917 52.381 0.00 0.00 0.00 2.57
2356 2541 1.208706 CTCCTCCTCCCTTTCCCTTC 58.791 60.000 0.00 0.00 0.00 3.46
2357 2542 0.800239 TCTCCTCCTCCCTTTCCCTT 59.200 55.000 0.00 0.00 0.00 3.95
2358 2543 1.031112 ATCTCCTCCTCCCTTTCCCT 58.969 55.000 0.00 0.00 0.00 4.20
2359 2544 1.344496 TGATCTCCTCCTCCCTTTCCC 60.344 57.143 0.00 0.00 0.00 3.97
2360 2545 2.182516 TGATCTCCTCCTCCCTTTCC 57.817 55.000 0.00 0.00 0.00 3.13
2361 2546 3.777522 TCTTTGATCTCCTCCTCCCTTTC 59.222 47.826 0.00 0.00 0.00 2.62
2362 2547 3.779738 CTCTTTGATCTCCTCCTCCCTTT 59.220 47.826 0.00 0.00 0.00 3.11
2392 2577 0.895530 AACGGAAGATGGAGCTTCGA 59.104 50.000 0.00 0.00 44.04 3.71
2635 4010 2.487428 CGCTCCACAGACTCTCCG 59.513 66.667 0.00 0.00 0.00 4.63
2839 4248 3.668191 ACAAAATGTTTACGCTGCATTCG 59.332 39.130 0.00 6.92 32.38 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.