Multiple sequence alignment - TraesCS6D01G395700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G395700 chr6D 100.000 9236 0 0 1 9236 468154256 468145021 0.000000e+00 17056.0
1 TraesCS6D01G395700 chr6D 87.941 1501 148 15 7224 8702 468168753 468167264 0.000000e+00 1738.0
2 TraesCS6D01G395700 chr6D 93.606 1126 68 4 7224 8347 468057284 468056161 0.000000e+00 1677.0
3 TraesCS6D01G395700 chr6D 85.496 1241 152 21 7224 8456 468096636 468095416 0.000000e+00 1269.0
4 TraesCS6D01G395700 chr6D 78.751 1633 262 55 899 2503 468171427 468169852 0.000000e+00 1014.0
5 TraesCS6D01G395700 chr6D 76.766 736 139 11 1490 2224 468184218 468183514 5.230000e-102 383.0
6 TraesCS6D01G395700 chr6D 85.924 341 39 4 129 463 468664699 468664362 1.140000e-93 355.0
7 TraesCS6D01G395700 chr6D 84.300 293 29 10 998 1277 468060790 468060502 4.250000e-68 270.0
8 TraesCS6D01G395700 chr6D 92.537 134 6 1 1 130 468165556 468165423 1.220000e-43 189.0
9 TraesCS6D01G395700 chr6D 86.131 137 14 4 8720 8856 468167192 468167061 9.670000e-30 143.0
10 TraesCS6D01G395700 chr6D 91.935 62 3 1 8396 8455 468056155 468056094 1.650000e-12 86.1
11 TraesCS6D01G395700 chr6D 94.231 52 3 0 3881 3932 468150324 468150273 7.690000e-11 80.5
12 TraesCS6D01G395700 chr6D 94.231 52 3 0 3933 3984 468150376 468150325 7.690000e-11 80.5
13 TraesCS6D01G395700 chrUn 97.483 4132 61 17 920 5018 216380860 216384981 0.000000e+00 7014.0
14 TraesCS6D01G395700 chrUn 95.435 1884 77 6 5020 6900 310897138 310899015 0.000000e+00 2994.0
15 TraesCS6D01G395700 chrUn 97.540 1707 38 2 6885 8588 310899086 310900791 0.000000e+00 2916.0
16 TraesCS6D01G395700 chrUn 87.720 1474 145 16 7224 8675 346081702 346080243 0.000000e+00 1687.0
17 TraesCS6D01G395700 chrUn 89.335 1097 100 8 7420 8506 79679519 79678430 0.000000e+00 1362.0
18 TraesCS6D01G395700 chrUn 97.090 653 14 1 177 829 216380233 216380880 0.000000e+00 1096.0
19 TraesCS6D01G395700 chrUn 77.864 1685 269 57 849 2503 210219709 210218099 0.000000e+00 950.0
20 TraesCS6D01G395700 chrUn 95.982 448 14 2 8791 9236 467999900 468000345 0.000000e+00 725.0
21 TraesCS6D01G395700 chrUn 76.965 738 134 14 1490 2224 211920478 211921182 1.120000e-103 388.0
22 TraesCS6D01G395700 chrUn 98.876 178 2 0 8612 8789 310900787 310900964 1.500000e-82 318.0
23 TraesCS6D01G395700 chrUn 80.829 386 58 6 280 663 210220076 210219705 1.170000e-73 289.0
24 TraesCS6D01G395700 chrUn 82.374 278 35 7 317 590 211919257 211919524 7.210000e-56 230.0
25 TraesCS6D01G395700 chrUn 84.536 194 28 2 190 382 75283204 75283396 3.400000e-44 191.0
26 TraesCS6D01G395700 chrUn 84.737 190 29 0 196 385 327314638 327314449 3.400000e-44 191.0
27 TraesCS6D01G395700 chrUn 90.164 122 12 0 5363 5484 211855622 211855501 9.600000e-35 159.0
28 TraesCS6D01G395700 chrUn 89.344 122 13 0 5363 5484 42736814 42736935 4.470000e-33 154.0
29 TraesCS6D01G395700 chrUn 89.344 122 13 0 5363 5484 42749698 42749819 4.470000e-33 154.0
30 TraesCS6D01G395700 chrUn 89.344 122 13 0 5363 5484 42751422 42751543 4.470000e-33 154.0
31 TraesCS6D01G395700 chrUn 89.344 122 13 0 5363 5484 42793851 42793972 4.470000e-33 154.0
32 TraesCS6D01G395700 chrUn 89.344 122 13 0 5363 5484 43139287 43139408 4.470000e-33 154.0
33 TraesCS6D01G395700 chrUn 86.131 137 14 4 8720 8856 311955993 311955862 9.670000e-30 143.0
34 TraesCS6D01G395700 chrUn 86.131 137 14 4 8720 8856 335694420 335694551 9.670000e-30 143.0
35 TraesCS6D01G395700 chrUn 94.231 52 3 0 3881 3932 216383887 216383938 7.690000e-11 80.5
36 TraesCS6D01G395700 chr6B 93.994 2514 104 13 723 3210 714336995 714334503 0.000000e+00 3762.0
37 TraesCS6D01G395700 chr6B 94.369 1474 66 8 6891 8350 714331030 714329560 0.000000e+00 2246.0
38 TraesCS6D01G395700 chr6B 91.346 1479 114 8 5419 6893 714332581 714331113 0.000000e+00 2010.0
39 TraesCS6D01G395700 chr6B 92.423 1399 75 10 3933 5306 714333975 714332583 0.000000e+00 1967.0
40 TraesCS6D01G395700 chr6B 88.024 1503 151 17 7230 8718 714340708 714339221 0.000000e+00 1751.0
41 TraesCS6D01G395700 chr6B 92.180 601 31 6 129 721 714337698 714337106 0.000000e+00 835.0
42 TraesCS6D01G395700 chr6B 83.039 737 110 8 1769 2494 714342797 714342065 0.000000e+00 654.0
43 TraesCS6D01G395700 chr6B 92.875 407 28 1 3527 3932 714334330 714333924 2.870000e-164 590.0
44 TraesCS6D01G395700 chr6B 76.965 738 134 14 1490 2224 714409598 714408894 1.120000e-103 388.0
45 TraesCS6D01G395700 chr6B 82.734 278 34 7 317 590 714410819 714410552 1.550000e-57 235.0
46 TraesCS6D01G395700 chr6B 91.367 139 11 1 8719 8856 714326923 714326785 1.220000e-43 189.0
47 TraesCS6D01G395700 chr6B 91.057 123 11 0 5363 5485 439062757 439062635 5.740000e-37 167.0
48 TraesCS6D01G395700 chr6A 85.835 1186 147 15 7224 8405 614162826 614161658 0.000000e+00 1240.0
49 TraesCS6D01G395700 chr6A 82.103 447 54 13 848 1276 614165910 614165472 8.820000e-95 359.0
50 TraesCS6D01G395700 chr1B 85.679 810 84 23 2651 3445 59461825 59461033 0.000000e+00 824.0
51 TraesCS6D01G395700 chr1B 84.651 215 29 3 2651 2864 59460626 59460837 2.610000e-50 211.0
52 TraesCS6D01G395700 chr1B 73.469 441 101 13 5747 6179 334247488 334247056 1.610000e-32 152.0
53 TraesCS6D01G395700 chr1B 72.023 529 130 15 5659 6180 600969150 600968633 3.480000e-29 141.0
54 TraesCS6D01G395700 chr1B 76.279 215 44 5 5659 5870 623371592 623371382 3.530000e-19 108.0
55 TraesCS6D01G395700 chr5B 86.680 518 61 6 2659 3175 407620796 407621306 1.350000e-157 568.0
56 TraesCS6D01G395700 chr5B 84.330 351 53 2 3439 3787 407621630 407621980 8.880000e-90 342.0
57 TraesCS6D01G395700 chr5B 85.223 291 38 5 3496 3781 691953807 691954097 2.520000e-75 294.0
58 TraesCS6D01G395700 chr5B 74.130 460 105 12 5745 6198 507639318 507638867 2.650000e-40 178.0
59 TraesCS6D01G395700 chr5B 79.681 251 46 4 5747 5993 251338931 251338682 9.530000e-40 176.0
60 TraesCS6D01G395700 chr5B 83.333 120 20 0 1139 1258 623167191 623167310 2.730000e-20 111.0
61 TraesCS6D01G395700 chr5D 86.392 485 50 12 2658 3141 490496664 490497133 4.940000e-142 516.0
62 TraesCS6D01G395700 chr5D 85.714 210 27 3 3581 3788 490496872 490496664 1.560000e-52 219.0
63 TraesCS6D01G395700 chr5D 81.915 282 29 14 3131 3396 490497434 490497709 1.560000e-52 219.0
64 TraesCS6D01G395700 chr5D 92.308 130 9 1 1 129 487527351 487527480 5.700000e-42 183.0
65 TraesCS6D01G395700 chr3A 86.146 397 45 9 8847 9236 588516277 588516670 3.990000e-113 420.0
66 TraesCS6D01G395700 chr4A 84.712 399 47 10 8848 9236 47456712 47457106 4.040000e-103 387.0
67 TraesCS6D01G395700 chr4A 77.441 297 54 9 1930 2224 698863618 698863333 2.060000e-36 165.0
68 TraesCS6D01G395700 chr4A 100.000 29 0 0 6144 6172 573875758 573875786 5.000000e-03 54.7
69 TraesCS6D01G395700 chr7A 84.794 388 50 9 8855 9236 113455687 113455303 1.880000e-101 381.0
70 TraesCS6D01G395700 chr7A 83.710 221 35 1 3568 3787 17931000 17931220 3.380000e-49 207.0
71 TraesCS6D01G395700 chr7A 85.326 184 21 5 2657 2838 488112860 488112681 1.580000e-42 185.0
72 TraesCS6D01G395700 chr7A 77.232 224 41 9 5656 5875 50623281 50623498 1.260000e-23 122.0
73 TraesCS6D01G395700 chr4B 84.840 376 51 5 8864 9236 139064044 139063672 3.150000e-99 374.0
74 TraesCS6D01G395700 chr4B 84.359 390 51 9 8853 9236 601931964 601932349 3.150000e-99 374.0
75 TraesCS6D01G395700 chr4B 73.357 563 128 19 5659 6213 575652383 575652931 1.220000e-43 189.0
76 TraesCS6D01G395700 chr5A 84.103 390 47 11 8855 9236 645417857 645418239 6.820000e-96 363.0
77 TraesCS6D01G395700 chr3B 83.979 387 51 9 8856 9236 815861463 815861844 2.450000e-95 361.0
78 TraesCS6D01G395700 chr3B 85.068 221 28 4 2646 2864 28120676 28120459 4.340000e-53 220.0
79 TraesCS6D01G395700 chr3B 74.185 368 86 7 5657 6019 792853411 792853774 2.690000e-30 145.0
80 TraesCS6D01G395700 chr3B 74.194 372 81 13 5714 6076 214443110 214442745 3.480000e-29 141.0
81 TraesCS6D01G395700 chr3B 74.921 315 67 8 5655 5962 799813740 799813431 5.820000e-27 134.0
82 TraesCS6D01G395700 chr1D 83.846 390 51 11 8855 9236 457075084 457075469 2.450000e-95 361.0
83 TraesCS6D01G395700 chr1D 86.408 206 25 2 2660 2864 323869879 323870082 1.210000e-53 222.0
84 TraesCS6D01G395700 chr1D 84.360 211 31 2 3578 3786 323870089 323869879 1.220000e-48 206.0
85 TraesCS6D01G395700 chr1D 80.124 161 30 2 4402 4560 193513847 193513687 1.630000e-22 119.0
86 TraesCS6D01G395700 chr2B 85.546 339 45 4 3452 3788 384087986 384087650 1.480000e-92 351.0
87 TraesCS6D01G395700 chr2B 77.056 462 95 7 1770 2224 118630146 118630603 1.190000e-63 255.0
88 TraesCS6D01G395700 chr2B 78.333 240 34 7 1056 1277 118629582 118629821 1.250000e-28 139.0
89 TraesCS6D01G395700 chr2B 88.372 43 5 0 5656 5698 458620450 458620408 1.700000e-02 52.8
90 TraesCS6D01G395700 chr2D 77.056 462 95 7 1770 2224 76871537 76871994 1.190000e-63 255.0
91 TraesCS6D01G395700 chr2D 91.912 136 5 3 1 130 263502434 263502299 1.580000e-42 185.0
92 TraesCS6D01G395700 chr2D 80.000 190 29 2 1097 1277 76871023 76871212 2.090000e-26 132.0
93 TraesCS6D01G395700 chr2A 73.664 767 149 31 1770 2496 77538160 77538913 1.990000e-61 248.0
94 TraesCS6D01G395700 chr2A 75.367 341 74 9 5656 5991 553049268 553049603 1.240000e-33 156.0
95 TraesCS6D01G395700 chr2A 80.000 190 29 2 1097 1277 77537646 77537835 2.090000e-26 132.0
96 TraesCS6D01G395700 chr4D 79.464 336 49 16 2651 2981 7037476 7037796 4.340000e-53 220.0
97 TraesCS6D01G395700 chr4D 82.511 223 37 2 3582 3803 7037886 7038107 2.630000e-45 195.0
98 TraesCS6D01G395700 chr4D 85.401 137 11 3 1 128 482352885 482353021 5.820000e-27 134.0
99 TraesCS6D01G395700 chr7D 93.182 132 6 3 1 132 73152109 73152237 3.400000e-44 191.0
100 TraesCS6D01G395700 chr7D 92.969 128 9 0 1 128 603770088 603769961 4.400000e-43 187.0
101 TraesCS6D01G395700 chr7D 91.176 136 6 2 1 130 603785447 603785312 7.370000e-41 180.0
102 TraesCS6D01G395700 chr7D 88.971 136 9 1 1 130 73147332 73147467 7.420000e-36 163.0
103 TraesCS6D01G395700 chr7D 79.856 139 26 2 4402 4540 10502585 10502449 5.900000e-17 100.0
104 TraesCS6D01G395700 chr3D 88.060 134 11 3 1 129 385391725 385391858 4.470000e-33 154.0
105 TraesCS6D01G395700 chr3D 86.331 139 10 3 1 130 385387007 385387145 9.670000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G395700 chr6D 468145021 468154256 9235 True 5739.000000 17056 96.154000 1 9236 3 chr6D.!!$R5 9235
1 TraesCS6D01G395700 chr6D 468095416 468096636 1220 True 1269.000000 1269 85.496000 7224 8456 1 chr6D.!!$R1 1232
2 TraesCS6D01G395700 chr6D 468165423 468171427 6004 True 771.000000 1738 86.340000 1 8856 4 chr6D.!!$R6 8855
3 TraesCS6D01G395700 chr6D 468056094 468060790 4696 True 677.700000 1677 89.947000 998 8455 3 chr6D.!!$R4 7457
4 TraesCS6D01G395700 chr6D 468183514 468184218 704 True 383.000000 383 76.766000 1490 2224 1 chr6D.!!$R2 734
5 TraesCS6D01G395700 chrUn 216380233 216384981 4748 False 2730.166667 7014 96.268000 177 5018 3 chrUn.!!$F9 4841
6 TraesCS6D01G395700 chrUn 310897138 310900964 3826 False 2076.000000 2994 97.283667 5020 8789 3 chrUn.!!$F10 3769
7 TraesCS6D01G395700 chrUn 346080243 346081702 1459 True 1687.000000 1687 87.720000 7224 8675 1 chrUn.!!$R5 1451
8 TraesCS6D01G395700 chrUn 79678430 79679519 1089 True 1362.000000 1362 89.335000 7420 8506 1 chrUn.!!$R1 1086
9 TraesCS6D01G395700 chrUn 210218099 210220076 1977 True 619.500000 950 79.346500 280 2503 2 chrUn.!!$R6 2223
10 TraesCS6D01G395700 chrUn 211919257 211921182 1925 False 309.000000 388 79.669500 317 2224 2 chrUn.!!$F8 1907
11 TraesCS6D01G395700 chr6B 714326785 714342797 16012 True 1556.000000 3762 91.068556 129 8856 9 chr6B.!!$R2 8727
12 TraesCS6D01G395700 chr6B 714408894 714410819 1925 True 311.500000 388 79.849500 317 2224 2 chr6B.!!$R3 1907
13 TraesCS6D01G395700 chr6A 614161658 614165910 4252 True 799.500000 1240 83.969000 848 8405 2 chr6A.!!$R1 7557
14 TraesCS6D01G395700 chr1B 59461033 59461825 792 True 824.000000 824 85.679000 2651 3445 1 chr1B.!!$R1 794
15 TraesCS6D01G395700 chr5B 407620796 407621980 1184 False 455.000000 568 85.505000 2659 3787 2 chr5B.!!$F3 1128
16 TraesCS6D01G395700 chr5D 490496664 490497709 1045 False 367.500000 516 84.153500 2658 3396 2 chr5D.!!$F2 738
17 TraesCS6D01G395700 chr4D 7037476 7038107 631 False 207.500000 220 80.987500 2651 3803 2 chr4D.!!$F2 1152

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.441921 GCAGCGCAAAACTCTCTCTC 59.558 55.000 11.47 0.00 0.00 3.20 F
130 131 0.517316 CCGGTTCAGCTACAACAAGC 59.483 55.000 9.36 0.00 43.11 4.01 F
512 5498 0.869068 TTGCAATGGTACGTGTTCCG 59.131 50.000 0.00 0.00 44.03 4.30 F
520 5506 1.004679 TACGTGTTCCGGCCTTTCC 60.005 57.895 0.00 0.00 42.24 3.13 F
3297 10106 1.227497 GCTCTGATTCCGAGCCTGG 60.227 63.158 16.67 0.00 46.22 4.45 F
4043 11736 0.166597 CACGTGGCAGCTACAATGTG 59.833 55.000 7.95 5.45 0.00 3.21 F
5977 13699 0.864455 GCCTTGCGATGATGCTAGAC 59.136 55.000 0.00 0.00 39.60 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2500 8538 0.388391 GTGCATGCGCTGGCTTAAAA 60.388 50.000 23.77 0.0 40.82 1.52 R
2698 9111 8.595362 TGTAGTTGAGGAATCATTTCTAGAGA 57.405 34.615 0.00 0.0 32.16 3.10 R
2864 9307 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.0 0.00 3.82 R
3597 10520 1.168407 CGCCACATCATCATCCACCC 61.168 60.000 0.00 0.0 0.00 4.61 R
5711 13433 0.107214 TTGACGGAGGGGCAATGATC 60.107 55.000 0.00 0.0 0.00 2.92 R
6104 13826 0.685097 CTTGTCGAAGGAAGGGGTCA 59.315 55.000 0.00 0.0 0.00 4.02 R
8975 19203 0.039888 GCCGGCGTTTTTATGTGTGT 60.040 50.000 12.58 0.0 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 7.833285 AGCTGTTAATAAAAGGAGAAAACCA 57.167 32.000 0.00 0.00 0.00 3.67
35 36 7.886338 AGCTGTTAATAAAAGGAGAAAACCAG 58.114 34.615 0.00 0.00 0.00 4.00
41 42 9.758651 TTAATAAAAGGAGAAAACCAGAAAAGC 57.241 29.630 0.00 0.00 0.00 3.51
42 43 5.939764 AAAAGGAGAAAACCAGAAAAGCT 57.060 34.783 0.00 0.00 0.00 3.74
43 44 4.926140 AAGGAGAAAACCAGAAAAGCTG 57.074 40.909 0.00 0.00 44.49 4.24
44 45 2.625314 AGGAGAAAACCAGAAAAGCTGC 59.375 45.455 0.00 0.00 43.50 5.25
46 47 3.006217 GGAGAAAACCAGAAAAGCTGCAT 59.994 43.478 1.02 0.00 43.50 3.96
47 48 4.218417 GGAGAAAACCAGAAAAGCTGCATA 59.782 41.667 1.02 0.00 43.50 3.14
49 50 5.776744 AGAAAACCAGAAAAGCTGCATAAG 58.223 37.500 1.02 0.00 43.50 1.73
50 51 5.302823 AGAAAACCAGAAAAGCTGCATAAGT 59.697 36.000 1.02 0.00 43.50 2.24
51 52 5.535753 AAACCAGAAAAGCTGCATAAGTT 57.464 34.783 1.02 0.00 43.50 2.66
68 69 3.886694 TGCACGCAGCGCAAAACT 61.887 55.556 16.61 0.00 45.08 2.66
69 70 3.093449 GCACGCAGCGCAAAACTC 61.093 61.111 16.61 0.00 34.62 3.01
70 71 2.633657 CACGCAGCGCAAAACTCT 59.366 55.556 16.61 0.00 0.00 3.24
73 74 1.131420 CGCAGCGCAAAACTCTCTC 59.869 57.895 11.47 0.00 0.00 3.20
74 75 1.287730 CGCAGCGCAAAACTCTCTCT 61.288 55.000 11.47 0.00 0.00 3.10
75 76 0.441921 GCAGCGCAAAACTCTCTCTC 59.558 55.000 11.47 0.00 0.00 3.20
76 77 1.938926 GCAGCGCAAAACTCTCTCTCT 60.939 52.381 11.47 0.00 0.00 3.10
77 78 1.725706 CAGCGCAAAACTCTCTCTCTG 59.274 52.381 11.47 0.00 0.00 3.35
78 79 1.615883 AGCGCAAAACTCTCTCTCTGA 59.384 47.619 11.47 0.00 0.00 3.27
79 80 2.233431 AGCGCAAAACTCTCTCTCTGAT 59.767 45.455 11.47 0.00 0.00 2.90
80 81 2.348059 GCGCAAAACTCTCTCTCTGATG 59.652 50.000 0.30 0.00 0.00 3.07
81 82 3.583806 CGCAAAACTCTCTCTCTGATGT 58.416 45.455 0.00 0.00 0.00 3.06
82 83 3.367327 CGCAAAACTCTCTCTCTGATGTG 59.633 47.826 0.00 0.00 0.00 3.21
85 86 5.295950 CAAAACTCTCTCTCTGATGTGTGT 58.704 41.667 0.00 0.00 0.00 3.72
86 87 4.517952 AACTCTCTCTCTGATGTGTGTG 57.482 45.455 0.00 0.00 0.00 3.82
87 88 3.495331 ACTCTCTCTCTGATGTGTGTGT 58.505 45.455 0.00 0.00 0.00 3.72
88 89 3.255395 ACTCTCTCTCTGATGTGTGTGTG 59.745 47.826 0.00 0.00 0.00 3.82
89 90 3.490348 TCTCTCTCTGATGTGTGTGTGA 58.510 45.455 0.00 0.00 0.00 3.58
90 91 3.505293 TCTCTCTCTGATGTGTGTGTGAG 59.495 47.826 0.00 0.00 0.00 3.51
91 92 3.225940 TCTCTCTGATGTGTGTGTGAGT 58.774 45.455 0.00 0.00 0.00 3.41
92 93 3.638627 TCTCTCTGATGTGTGTGTGAGTT 59.361 43.478 0.00 0.00 0.00 3.01
93 94 3.982475 TCTCTGATGTGTGTGTGAGTTC 58.018 45.455 0.00 0.00 0.00 3.01
95 96 4.039609 TCTCTGATGTGTGTGTGAGTTCAT 59.960 41.667 0.00 0.00 0.00 2.57
96 97 4.309933 TCTGATGTGTGTGTGAGTTCATC 58.690 43.478 0.00 0.00 34.28 2.92
97 98 3.059166 TGATGTGTGTGTGAGTTCATCG 58.941 45.455 0.00 0.00 35.78 3.84
98 99 2.595124 TGTGTGTGTGAGTTCATCGT 57.405 45.000 0.00 0.00 0.00 3.73
99 100 2.469826 TGTGTGTGTGAGTTCATCGTC 58.530 47.619 0.00 0.00 0.00 4.20
101 102 2.472861 GTGTGTGTGAGTTCATCGTCTG 59.527 50.000 0.00 0.00 0.00 3.51
102 103 2.360801 TGTGTGTGAGTTCATCGTCTGA 59.639 45.455 0.00 0.00 0.00 3.27
103 104 3.181480 TGTGTGTGAGTTCATCGTCTGAA 60.181 43.478 0.10 0.10 41.61 3.02
104 105 3.990469 GTGTGTGAGTTCATCGTCTGAAT 59.010 43.478 6.49 0.00 45.36 2.57
105 106 4.449068 GTGTGTGAGTTCATCGTCTGAATT 59.551 41.667 6.49 3.15 45.36 2.17
106 107 4.686091 TGTGTGAGTTCATCGTCTGAATTC 59.314 41.667 14.41 14.41 45.36 2.17
107 108 4.926238 GTGTGAGTTCATCGTCTGAATTCT 59.074 41.667 18.77 9.07 45.82 2.40
108 109 5.406780 GTGTGAGTTCATCGTCTGAATTCTT 59.593 40.000 18.77 4.66 45.82 2.52
109 110 5.991606 TGTGAGTTCATCGTCTGAATTCTTT 59.008 36.000 18.77 3.00 45.82 2.52
110 111 6.146184 TGTGAGTTCATCGTCTGAATTCTTTC 59.854 38.462 18.77 12.94 45.82 2.62
111 112 5.639506 TGAGTTCATCGTCTGAATTCTTTCC 59.360 40.000 18.77 3.75 45.82 3.13
112 113 4.938226 AGTTCATCGTCTGAATTCTTTCCC 59.062 41.667 7.05 0.00 45.36 3.97
114 115 2.380084 TCGTCTGAATTCTTTCCCGG 57.620 50.000 7.05 0.00 0.00 5.73
117 118 2.415512 CGTCTGAATTCTTTCCCGGTTC 59.584 50.000 7.05 0.00 0.00 3.62
118 119 3.408634 GTCTGAATTCTTTCCCGGTTCA 58.591 45.455 7.05 0.49 0.00 3.18
119 120 3.437049 GTCTGAATTCTTTCCCGGTTCAG 59.563 47.826 18.04 18.04 44.31 3.02
122 123 3.008594 TGAATTCTTTCCCGGTTCAGCTA 59.991 43.478 7.05 0.00 0.00 3.32
123 124 2.467566 TTCTTTCCCGGTTCAGCTAC 57.532 50.000 0.00 0.00 0.00 3.58
124 125 1.344065 TCTTTCCCGGTTCAGCTACA 58.656 50.000 0.00 0.00 0.00 2.74
125 126 1.695242 TCTTTCCCGGTTCAGCTACAA 59.305 47.619 0.00 0.00 0.00 2.41
126 127 1.804748 CTTTCCCGGTTCAGCTACAAC 59.195 52.381 0.00 0.00 0.00 3.32
127 128 0.759959 TTCCCGGTTCAGCTACAACA 59.240 50.000 0.00 0.00 0.00 3.33
128 129 0.759959 TCCCGGTTCAGCTACAACAA 59.240 50.000 0.00 0.00 0.00 2.83
129 130 1.156736 CCCGGTTCAGCTACAACAAG 58.843 55.000 0.00 3.74 0.00 3.16
130 131 0.517316 CCGGTTCAGCTACAACAAGC 59.483 55.000 9.36 0.00 43.11 4.01
131 132 0.517316 CGGTTCAGCTACAACAAGCC 59.483 55.000 9.36 0.00 43.86 4.35
132 133 1.604604 GGTTCAGCTACAACAAGCCA 58.395 50.000 9.36 0.00 43.86 4.75
146 5118 2.426024 ACAAGCCAACATCATCATGCTC 59.574 45.455 0.00 0.00 32.57 4.26
155 5127 3.007074 ACATCATCATGCTCAGCTCCTAG 59.993 47.826 0.00 0.00 32.57 3.02
156 5128 1.343789 TCATCATGCTCAGCTCCTAGC 59.656 52.381 0.00 5.47 42.84 3.42
173 5147 1.187087 AGCTACCCTATGCGGCTATC 58.813 55.000 0.00 0.00 0.00 2.08
202 5182 7.302350 TCATCACATGGTAACTACAAAATCG 57.698 36.000 0.00 0.00 37.61 3.34
258 5238 6.208599 TGGCCCACTTCTTATAGAAAACAAAG 59.791 38.462 0.00 0.00 33.19 2.77
512 5498 0.869068 TTGCAATGGTACGTGTTCCG 59.131 50.000 0.00 0.00 44.03 4.30
518 5504 1.301953 GGTACGTGTTCCGGCCTTT 60.302 57.895 0.00 0.00 42.24 3.11
519 5505 1.293963 GGTACGTGTTCCGGCCTTTC 61.294 60.000 0.00 0.00 42.24 2.62
520 5506 1.004679 TACGTGTTCCGGCCTTTCC 60.005 57.895 0.00 0.00 42.24 3.13
521 5507 1.756408 TACGTGTTCCGGCCTTTCCA 61.756 55.000 0.00 0.00 42.24 3.53
522 5508 2.325082 CGTGTTCCGGCCTTTCCAG 61.325 63.158 0.00 0.00 34.01 3.86
650 5636 9.044150 GTGAAAAGAGAGAGAATATGAGGATTG 57.956 37.037 0.00 0.00 0.00 2.67
875 5970 4.881850 ACCAAAGAATGACGATGGGAATAC 59.118 41.667 0.00 0.00 34.82 1.89
881 5976 3.728076 TGACGATGGGAATACAGTAGC 57.272 47.619 0.00 0.00 0.00 3.58
882 5977 3.296854 TGACGATGGGAATACAGTAGCT 58.703 45.455 0.00 0.00 0.00 3.32
887 5982 2.463752 TGGGAATACAGTAGCTCCGTT 58.536 47.619 0.00 0.00 0.00 4.44
2500 8538 4.763279 ACGGACGATTTTGGGTAAGAAAAT 59.237 37.500 0.00 0.00 36.04 1.82
2629 9042 9.651718 GTCGAAGTGGCATAATAATTAAAGAAG 57.348 33.333 0.00 0.00 0.00 2.85
2698 9111 8.431910 TTTCTACCCTCAACTTTACAGATAGT 57.568 34.615 0.00 0.00 0.00 2.12
2699 9112 7.642082 TCTACCCTCAACTTTACAGATAGTC 57.358 40.000 0.00 0.00 0.00 2.59
2761 9183 3.005791 GTCCCTCAATTGTTGAAACCAGG 59.994 47.826 5.13 2.04 39.58 4.45
2796 9218 1.950909 CAAACGGCTTCAGGTGGTTTA 59.049 47.619 0.00 0.00 30.35 2.01
2864 9307 1.554392 CGCCTCATCTTCGTCTTCTG 58.446 55.000 0.00 0.00 0.00 3.02
3194 10002 6.481976 TGATTCTTCACGACTGTTGTTTACAT 59.518 34.615 0.00 0.00 35.85 2.29
3297 10106 1.227497 GCTCTGATTCCGAGCCTGG 60.227 63.158 16.67 0.00 46.22 4.45
3302 10120 1.958205 GATTCCGAGCCTGGCGATG 60.958 63.158 13.96 6.95 0.00 3.84
3307 10129 2.202987 GAGCCTGGCGATGTCCTG 60.203 66.667 13.96 0.00 0.00 3.86
3597 10520 7.979444 AGATAGAGGAAGAAGACGAAGATAG 57.021 40.000 0.00 0.00 0.00 2.08
3655 10579 0.388659 TGCCATGTCAGCACAAAACC 59.611 50.000 0.00 0.00 35.64 3.27
3926 11619 5.047660 GTGTTCCATTAGTGGTTATTTGGCA 60.048 40.000 3.93 0.00 46.16 4.92
3931 11624 9.821240 TTCCATTAGTGGTTATTTGGCATATAT 57.179 29.630 3.93 0.00 46.16 0.86
3932 11625 9.241919 TCCATTAGTGGTTATTTGGCATATATG 57.758 33.333 8.45 8.45 46.16 1.78
3933 11626 8.469200 CCATTAGTGGTTATTTGGCATATATGG 58.531 37.037 14.51 0.00 40.83 2.74
3934 11627 8.469200 CATTAGTGGTTATTTGGCATATATGGG 58.531 37.037 14.51 0.00 0.00 4.00
3935 11628 6.212840 AGTGGTTATTTGGCATATATGGGA 57.787 37.500 14.51 0.00 0.00 4.37
3936 11629 6.010219 AGTGGTTATTTGGCATATATGGGAC 58.990 40.000 14.51 0.00 0.00 4.46
3937 11630 5.007034 TGGTTATTTGGCATATATGGGACG 58.993 41.667 14.51 0.00 0.00 4.79
3938 11631 4.142469 GGTTATTTGGCATATATGGGACGC 60.142 45.833 14.51 0.00 0.00 5.19
3939 11632 1.518325 TTTGGCATATATGGGACGCG 58.482 50.000 14.51 3.53 0.00 6.01
3940 11633 0.682292 TTGGCATATATGGGACGCGA 59.318 50.000 15.93 0.00 0.00 5.87
3941 11634 0.682292 TGGCATATATGGGACGCGAA 59.318 50.000 15.93 0.00 0.00 4.70
3942 11635 1.070914 TGGCATATATGGGACGCGAAA 59.929 47.619 15.93 0.00 0.00 3.46
3943 11636 2.147958 GGCATATATGGGACGCGAAAA 58.852 47.619 15.93 0.00 0.00 2.29
3944 11637 2.747446 GGCATATATGGGACGCGAAAAT 59.253 45.455 15.93 3.15 0.00 1.82
3945 11638 3.936453 GGCATATATGGGACGCGAAAATA 59.064 43.478 15.93 5.55 0.00 1.40
3946 11639 4.574828 GGCATATATGGGACGCGAAAATAT 59.425 41.667 15.93 12.60 0.00 1.28
3947 11640 5.277345 GGCATATATGGGACGCGAAAATATC 60.277 44.000 15.93 0.00 0.00 1.63
3948 11641 5.293324 GCATATATGGGACGCGAAAATATCA 59.707 40.000 15.93 1.08 0.00 2.15
3949 11642 6.510157 GCATATATGGGACGCGAAAATATCAG 60.510 42.308 15.93 7.80 0.00 2.90
3950 11643 1.295792 TGGGACGCGAAAATATCAGC 58.704 50.000 15.93 0.00 0.00 4.26
3951 11644 1.134521 TGGGACGCGAAAATATCAGCT 60.135 47.619 15.93 0.00 0.00 4.24
3952 11645 2.101750 TGGGACGCGAAAATATCAGCTA 59.898 45.455 15.93 0.00 0.00 3.32
3953 11646 3.128349 GGGACGCGAAAATATCAGCTAA 58.872 45.455 15.93 0.00 0.00 3.09
3954 11647 3.184581 GGGACGCGAAAATATCAGCTAAG 59.815 47.826 15.93 0.00 0.00 2.18
3955 11648 3.802685 GGACGCGAAAATATCAGCTAAGT 59.197 43.478 15.93 0.00 0.00 2.24
3956 11649 4.318121 GGACGCGAAAATATCAGCTAAGTG 60.318 45.833 15.93 0.00 0.00 3.16
3957 11650 4.181578 ACGCGAAAATATCAGCTAAGTGT 58.818 39.130 15.93 0.00 0.00 3.55
3958 11651 4.630069 ACGCGAAAATATCAGCTAAGTGTT 59.370 37.500 15.93 0.00 0.00 3.32
3959 11652 5.191059 CGCGAAAATATCAGCTAAGTGTTC 58.809 41.667 0.00 0.00 0.00 3.18
3960 11653 5.502606 GCGAAAATATCAGCTAAGTGTTCC 58.497 41.667 0.00 0.00 0.00 3.62
3961 11654 5.064707 GCGAAAATATCAGCTAAGTGTTCCA 59.935 40.000 0.00 0.00 0.00 3.53
3962 11655 6.238484 GCGAAAATATCAGCTAAGTGTTCCAT 60.238 38.462 0.00 0.00 0.00 3.41
3963 11656 7.679638 GCGAAAATATCAGCTAAGTGTTCCATT 60.680 37.037 0.00 0.00 0.00 3.16
3964 11657 8.826710 CGAAAATATCAGCTAAGTGTTCCATTA 58.173 33.333 0.00 0.00 0.00 1.90
3966 11659 9.686683 AAAATATCAGCTAAGTGTTCCATTAGT 57.313 29.630 0.00 0.00 32.64 2.24
3967 11660 8.668510 AATATCAGCTAAGTGTTCCATTAGTG 57.331 34.615 0.00 0.00 32.64 2.74
3969 11662 4.286032 TCAGCTAAGTGTTCCATTAGTGGT 59.714 41.667 3.93 0.00 46.16 4.16
3970 11663 5.003804 CAGCTAAGTGTTCCATTAGTGGTT 58.996 41.667 3.93 0.00 46.16 3.67
3971 11664 6.014070 TCAGCTAAGTGTTCCATTAGTGGTTA 60.014 38.462 3.93 0.00 46.16 2.85
3972 11665 6.823689 CAGCTAAGTGTTCCATTAGTGGTTAT 59.176 38.462 3.93 0.00 46.16 1.89
3973 11666 7.336931 CAGCTAAGTGTTCCATTAGTGGTTATT 59.663 37.037 3.93 0.00 46.16 1.40
3974 11667 7.888546 AGCTAAGTGTTCCATTAGTGGTTATTT 59.111 33.333 3.93 0.00 46.16 1.40
3975 11668 7.968405 GCTAAGTGTTCCATTAGTGGTTATTTG 59.032 37.037 3.93 0.00 46.16 2.32
3976 11669 6.834168 AGTGTTCCATTAGTGGTTATTTGG 57.166 37.500 3.93 0.00 46.16 3.28
3977 11670 5.185056 AGTGTTCCATTAGTGGTTATTTGGC 59.815 40.000 3.93 0.00 46.16 4.52
3978 11671 5.185056 GTGTTCCATTAGTGGTTATTTGGCT 59.815 40.000 3.93 0.00 46.16 4.75
4043 11736 0.166597 CACGTGGCAGCTACAATGTG 59.833 55.000 7.95 5.45 0.00 3.21
4050 11743 2.632377 GCAGCTACAATGTGAAGGCTA 58.368 47.619 0.00 0.00 0.00 3.93
4184 11877 6.495181 TCCCATGTTCTTTTTGCTGGTAATTA 59.505 34.615 0.00 0.00 0.00 1.40
4289 11989 5.528320 GTCTTGTAGGTAGGTGCTACTCTAG 59.472 48.000 0.00 0.00 37.16 2.43
4533 12246 4.842531 TTGACCACCTATGATGACACAT 57.157 40.909 0.00 0.00 0.00 3.21
4561 12274 2.455557 CAATACATTTGGAGTGCCCCA 58.544 47.619 0.00 0.00 0.00 4.96
5224 12944 8.165239 TGACCATTTCCATATTAACTATGCAC 57.835 34.615 0.00 0.00 36.63 4.57
5238 12958 3.938963 ACTATGCACGGTCCATACAAAAG 59.061 43.478 0.00 0.00 0.00 2.27
5359 13080 7.119846 ACGTTCTTCTTTATTTCCTGGAGATTG 59.880 37.037 4.92 0.00 0.00 2.67
5411 13132 3.824443 GGCAAGGCTAAGTTTGTCCTAAA 59.176 43.478 0.00 0.00 0.00 1.85
5442 13164 1.268066 TATGTGCCTTGGTCACCGTA 58.732 50.000 10.19 3.65 33.71 4.02
5465 13187 8.270799 CGTACCGAAAATTATACACCTTACATG 58.729 37.037 0.00 0.00 0.00 3.21
5507 13229 8.710239 TATAAAGTACTTATTGAGGATGGCACA 58.290 33.333 8.92 0.00 35.42 4.57
5711 13433 2.096406 CGAAGAATGTGTGCGGCG 59.904 61.111 0.51 0.51 0.00 6.46
5765 13487 9.453325 GATAGAACTTGTTGTAGTAGATAGTGC 57.547 37.037 0.00 0.00 0.00 4.40
5766 13488 7.228314 AGAACTTGTTGTAGTAGATAGTGCA 57.772 36.000 0.00 0.00 0.00 4.57
5820 13542 2.389962 TTAGAATAACAACCGCCGCT 57.610 45.000 0.00 0.00 0.00 5.52
5977 13699 0.864455 GCCTTGCGATGATGCTAGAC 59.136 55.000 0.00 0.00 39.60 2.59
6026 13748 5.289595 CGGTGTACACTATTGCATCTACAT 58.710 41.667 24.55 0.00 0.00 2.29
6104 13826 8.637986 TGGAAGAAACACTTAATAACAAAGCAT 58.362 29.630 0.00 0.00 39.13 3.79
6229 13951 1.134401 CCTAATCGTGTGTGCCCTCAT 60.134 52.381 0.00 0.00 0.00 2.90
6232 13954 0.036732 ATCGTGTGTGCCCTCATGTT 59.963 50.000 0.00 0.00 0.00 2.71
6239 13961 2.030805 GTGTGCCCTCATGTTTGAGTTC 60.031 50.000 2.61 0.00 46.71 3.01
6421 14143 8.861033 TTATCTGATGATTGCAATTGTTTAGC 57.139 30.769 14.33 0.00 34.32 3.09
6560 14283 2.685106 TGTCTGGTTCAGAGGAGAGT 57.315 50.000 0.00 0.00 41.46 3.24
6584 14307 2.425143 AGAGGCAACCATACATGTGG 57.575 50.000 9.11 4.51 45.04 4.17
6585 14308 1.915489 AGAGGCAACCATACATGTGGA 59.085 47.619 9.11 0.00 42.02 4.02
6611 14334 7.023171 AGAGAGAAAAGAGAGGAGTACTACA 57.977 40.000 8.10 0.00 0.00 2.74
6617 14340 4.864483 AGAGAGGAGTACTACATGGTGA 57.136 45.455 8.10 0.00 0.00 4.02
6621 14344 6.069556 AGAGAGGAGTACTACATGGTGACTTA 60.070 42.308 8.10 0.00 0.00 2.24
6698 14421 1.663702 CGCCAGAAAACGGACGTCT 60.664 57.895 16.46 0.00 0.00 4.18
6710 14433 1.658673 GACGTCTGGACCACTTCGT 59.341 57.895 8.70 11.84 0.00 3.85
6781 14506 8.311836 CCCGGACACTACAATCTAAACATATAT 58.688 37.037 0.73 0.00 0.00 0.86
6928 14738 9.899226 GTTTCCTCCTGATGTAAATAATATTGC 57.101 33.333 0.00 0.00 0.00 3.56
7053 14866 8.798153 GTTTTCCATATATGCTTTGAACGAAAG 58.202 33.333 7.24 0.00 43.63 2.62
7058 14871 1.942677 TGCTTTGAACGAAAGACCGA 58.057 45.000 0.00 0.00 43.50 4.69
7387 15213 8.203485 AGAAGGCAAAATTCATAAAACTGTTCA 58.797 29.630 0.00 0.00 0.00 3.18
7620 15446 2.548920 CCTAGAAGTTGATGCCCCGATC 60.549 54.545 0.00 0.00 0.00 3.69
7697 15523 1.072331 GAAGGTGCCTCTGAACTTGGA 59.928 52.381 0.00 0.00 0.00 3.53
7857 15683 6.218746 GGATTTTGGCATATCAAGGTTGATC 58.781 40.000 8.49 0.00 44.17 2.92
8187 16013 2.874701 GGATCAAAGACCATGGATGACG 59.125 50.000 21.47 3.72 0.00 4.35
8307 16137 8.762426 GGTCGAAAATAATAAGTGACTATGGAC 58.238 37.037 0.00 0.00 0.00 4.02
8394 16230 3.582208 CCCATGGTCCCAAGAAAATTTGA 59.418 43.478 11.73 0.00 0.00 2.69
8530 16397 0.103208 CCTCGACTGCATCCTGGTAC 59.897 60.000 0.00 0.00 0.00 3.34
8802 19030 8.257830 TCAACGTACTATGCATGTTGAAATTA 57.742 30.769 20.93 4.73 44.72 1.40
8807 19035 9.586150 CGTACTATGCATGTTGAAATTAATCTC 57.414 33.333 10.16 0.00 0.00 2.75
8859 19087 5.627499 TGAAGCTCGCATACTTCATTTTT 57.373 34.783 7.90 0.00 45.48 1.94
8879 19107 5.346181 TTTTTCGACAAAGGGTGGATTTT 57.654 34.783 0.00 0.00 34.00 1.82
8880 19108 6.466885 TTTTTCGACAAAGGGTGGATTTTA 57.533 33.333 0.00 0.00 34.00 1.52
8881 19109 6.658188 TTTTCGACAAAGGGTGGATTTTAT 57.342 33.333 0.00 0.00 34.00 1.40
8884 19112 6.995511 TCGACAAAGGGTGGATTTTATTAG 57.004 37.500 0.00 0.00 28.37 1.73
8887 19115 6.458342 CGACAAAGGGTGGATTTTATTAGCTC 60.458 42.308 0.00 0.00 0.00 4.09
8888 19116 6.252995 ACAAAGGGTGGATTTTATTAGCTCA 58.747 36.000 0.00 0.00 0.00 4.26
8890 19118 7.234577 ACAAAGGGTGGATTTTATTAGCTCAAA 59.765 33.333 0.00 0.00 0.00 2.69
8891 19119 6.775594 AGGGTGGATTTTATTAGCTCAAAC 57.224 37.500 0.00 0.00 0.00 2.93
8892 19120 6.494059 AGGGTGGATTTTATTAGCTCAAACT 58.506 36.000 0.00 0.00 0.00 2.66
8893 19121 6.378280 AGGGTGGATTTTATTAGCTCAAACTG 59.622 38.462 0.00 0.00 0.00 3.16
8894 19122 6.377146 GGGTGGATTTTATTAGCTCAAACTGA 59.623 38.462 0.00 0.00 0.00 3.41
8895 19123 7.093945 GGGTGGATTTTATTAGCTCAAACTGAA 60.094 37.037 0.00 0.00 0.00 3.02
8897 19125 8.515414 GTGGATTTTATTAGCTCAAACTGAAGT 58.485 33.333 0.00 0.00 0.00 3.01
8898 19126 9.733556 TGGATTTTATTAGCTCAAACTGAAGTA 57.266 29.630 0.00 0.00 0.00 2.24
8899 19127 9.989869 GGATTTTATTAGCTCAAACTGAAGTAC 57.010 33.333 0.00 0.00 0.00 2.73
8900 19128 9.989869 GATTTTATTAGCTCAAACTGAAGTACC 57.010 33.333 0.00 0.00 0.00 3.34
8901 19129 8.911918 TTTTATTAGCTCAAACTGAAGTACCA 57.088 30.769 0.00 0.00 0.00 3.25
8902 19130 8.911918 TTTATTAGCTCAAACTGAAGTACCAA 57.088 30.769 0.00 0.00 0.00 3.67
8904 19132 7.817418 ATTAGCTCAAACTGAAGTACCAAAA 57.183 32.000 0.00 0.00 0.00 2.44
8905 19133 5.757850 AGCTCAAACTGAAGTACCAAAAG 57.242 39.130 0.00 0.00 0.00 2.27
8906 19134 5.437060 AGCTCAAACTGAAGTACCAAAAGA 58.563 37.500 0.00 0.00 0.00 2.52
8907 19135 5.885912 AGCTCAAACTGAAGTACCAAAAGAA 59.114 36.000 0.00 0.00 0.00 2.52
8909 19137 7.719633 AGCTCAAACTGAAGTACCAAAAGAATA 59.280 33.333 0.00 0.00 0.00 1.75
8910 19138 7.803659 GCTCAAACTGAAGTACCAAAAGAATAC 59.196 37.037 0.00 0.00 0.00 1.89
8911 19139 8.740123 TCAAACTGAAGTACCAAAAGAATACA 57.260 30.769 0.00 0.00 0.00 2.29
8912 19140 9.179909 TCAAACTGAAGTACCAAAAGAATACAA 57.820 29.630 0.00 0.00 0.00 2.41
8913 19141 9.796120 CAAACTGAAGTACCAAAAGAATACAAA 57.204 29.630 0.00 0.00 0.00 2.83
8914 19142 9.797556 AAACTGAAGTACCAAAAGAATACAAAC 57.202 29.630 0.00 0.00 0.00 2.93
8915 19143 8.514330 ACTGAAGTACCAAAAGAATACAAACA 57.486 30.769 0.00 0.00 0.00 2.83
8916 19144 9.131791 ACTGAAGTACCAAAAGAATACAAACAT 57.868 29.630 0.00 0.00 0.00 2.71
8931 19159 5.195001 ACAAACATAATGAACACACACCC 57.805 39.130 0.00 0.00 0.00 4.61
8933 19161 2.432444 ACATAATGAACACACACCCGG 58.568 47.619 0.00 0.00 0.00 5.73
8935 19163 0.606944 TAATGAACACACACCCGGCC 60.607 55.000 0.00 0.00 0.00 6.13
8936 19164 2.351924 AATGAACACACACCCGGCCT 62.352 55.000 0.00 0.00 0.00 5.19
8937 19165 2.668550 GAACACACACCCGGCCTC 60.669 66.667 0.00 0.00 0.00 4.70
8938 19166 3.168528 AACACACACCCGGCCTCT 61.169 61.111 0.00 0.00 0.00 3.69
8939 19167 1.823169 GAACACACACCCGGCCTCTA 61.823 60.000 0.00 0.00 0.00 2.43
8940 19168 1.198759 AACACACACCCGGCCTCTAT 61.199 55.000 0.00 0.00 0.00 1.98
8942 19170 0.389391 CACACACCCGGCCTCTATAG 59.611 60.000 0.00 0.00 0.00 1.31
8945 19173 0.481567 ACACCCGGCCTCTATAGCTA 59.518 55.000 0.00 0.00 0.00 3.32
8947 19175 0.481567 ACCCGGCCTCTATAGCTACA 59.518 55.000 0.00 0.00 0.00 2.74
8949 19177 2.180276 CCCGGCCTCTATAGCTACAAT 58.820 52.381 0.00 0.00 0.00 2.71
8953 19181 4.380655 CCGGCCTCTATAGCTACAATGTAC 60.381 50.000 0.00 0.00 0.00 2.90
8954 19182 4.217767 CGGCCTCTATAGCTACAATGTACA 59.782 45.833 0.00 0.00 0.00 2.90
8955 19183 5.105716 CGGCCTCTATAGCTACAATGTACAT 60.106 44.000 1.41 1.41 0.00 2.29
8956 19184 6.095021 CGGCCTCTATAGCTACAATGTACATA 59.905 42.308 9.21 0.00 0.00 2.29
8957 19185 7.484975 GGCCTCTATAGCTACAATGTACATAG 58.515 42.308 9.21 4.21 0.00 2.23
8959 19187 7.484975 CCTCTATAGCTACAATGTACATAGCC 58.515 42.308 20.49 7.59 41.91 3.93
8960 19188 7.122799 CCTCTATAGCTACAATGTACATAGCCA 59.877 40.741 20.49 11.35 41.91 4.75
8961 19189 8.417273 TCTATAGCTACAATGTACATAGCCAA 57.583 34.615 20.49 12.53 41.91 4.52
8963 19191 5.097742 AGCTACAATGTACATAGCCAACA 57.902 39.130 20.49 0.00 41.91 3.33
8964 19192 4.876107 AGCTACAATGTACATAGCCAACAC 59.124 41.667 20.49 3.56 41.91 3.32
8965 19193 4.035208 GCTACAATGTACATAGCCAACACC 59.965 45.833 15.42 0.00 36.18 4.16
8968 19196 5.016173 ACAATGTACATAGCCAACACCAAT 58.984 37.500 9.21 0.00 0.00 3.16
8970 19198 2.752354 TGTACATAGCCAACACCAATGC 59.248 45.455 0.00 0.00 0.00 3.56
8971 19199 1.921982 ACATAGCCAACACCAATGCA 58.078 45.000 0.00 0.00 0.00 3.96
8972 19200 1.545582 ACATAGCCAACACCAATGCAC 59.454 47.619 0.00 0.00 0.00 4.57
8973 19201 1.545136 CATAGCCAACACCAATGCACA 59.455 47.619 0.00 0.00 0.00 4.57
8974 19202 0.958091 TAGCCAACACCAATGCACAC 59.042 50.000 0.00 0.00 0.00 3.82
8975 19203 1.042003 AGCCAACACCAATGCACACA 61.042 50.000 0.00 0.00 0.00 3.72
8976 19204 0.875474 GCCAACACCAATGCACACAC 60.875 55.000 0.00 0.00 0.00 3.82
8978 19206 1.558741 CAACACCAATGCACACACAC 58.441 50.000 0.00 0.00 0.00 3.82
8981 19209 0.455005 CACCAATGCACACACACACA 59.545 50.000 0.00 0.00 0.00 3.72
8983 19211 2.292845 CACCAATGCACACACACACATA 59.707 45.455 0.00 0.00 0.00 2.29
8985 19213 3.382865 ACCAATGCACACACACACATAAA 59.617 39.130 0.00 0.00 0.00 1.40
8986 19214 4.142071 ACCAATGCACACACACACATAAAA 60.142 37.500 0.00 0.00 0.00 1.52
8987 19215 4.807834 CCAATGCACACACACACATAAAAA 59.192 37.500 0.00 0.00 0.00 1.94
8988 19216 5.276773 CCAATGCACACACACACATAAAAAC 60.277 40.000 0.00 0.00 0.00 2.43
8990 19218 2.215363 GCACACACACACATAAAAACGC 59.785 45.455 0.00 0.00 0.00 4.84
8991 19219 2.786578 CACACACACACATAAAAACGCC 59.213 45.455 0.00 0.00 0.00 5.68
8992 19220 2.040524 CACACACACATAAAAACGCCG 58.959 47.619 0.00 0.00 0.00 6.46
8993 19221 1.002251 ACACACACATAAAAACGCCGG 60.002 47.619 0.00 0.00 0.00 6.13
8994 19222 0.039888 ACACACATAAAAACGCCGGC 60.040 50.000 19.07 19.07 0.00 6.13
8996 19224 0.669077 ACACATAAAAACGCCGGCAA 59.331 45.000 28.98 4.00 0.00 4.52
8997 19225 1.067212 ACACATAAAAACGCCGGCAAA 59.933 42.857 28.98 4.41 0.00 3.68
8998 19226 2.288518 ACACATAAAAACGCCGGCAAAT 60.289 40.909 28.98 8.36 0.00 2.32
8999 19227 3.057456 ACACATAAAAACGCCGGCAAATA 60.057 39.130 28.98 11.89 0.00 1.40
9000 19228 3.545873 CACATAAAAACGCCGGCAAATAG 59.454 43.478 28.98 12.44 0.00 1.73
9019 19247 8.405531 GCAAATAGCAAAGTCATATAAGACCAA 58.594 33.333 4.52 0.00 44.79 3.67
9022 19250 9.686683 AATAGCAAAGTCATATAAGACCAAACT 57.313 29.630 4.52 1.59 39.34 2.66
9025 19253 9.113838 AGCAAAGTCATATAAGACCAAACTATG 57.886 33.333 4.52 0.00 39.34 2.23
9026 19254 8.893727 GCAAAGTCATATAAGACCAAACTATGT 58.106 33.333 4.52 0.00 39.34 2.29
9028 19256 9.959721 AAAGTCATATAAGACCAAACTATGTGT 57.040 29.630 4.52 0.00 39.34 3.72
9031 19259 9.477484 GTCATATAAGACCAAACTATGTGTAGG 57.523 37.037 0.00 0.00 32.36 3.18
9032 19260 8.148351 TCATATAAGACCAAACTATGTGTAGGC 58.852 37.037 0.00 0.00 31.96 3.93
9033 19261 3.247006 AGACCAAACTATGTGTAGGCG 57.753 47.619 0.00 0.00 31.96 5.52
9034 19262 2.829720 AGACCAAACTATGTGTAGGCGA 59.170 45.455 0.00 0.00 31.96 5.54
9035 19263 2.928116 GACCAAACTATGTGTAGGCGAC 59.072 50.000 0.00 0.00 31.96 5.19
9036 19264 1.924524 CCAAACTATGTGTAGGCGACG 59.075 52.381 0.00 0.00 31.96 5.12
9039 19267 3.581024 AACTATGTGTAGGCGACGAAA 57.419 42.857 0.00 0.00 31.96 3.46
9042 19270 3.924686 ACTATGTGTAGGCGACGAAAAAG 59.075 43.478 0.00 0.00 31.96 2.27
9043 19271 2.512485 TGTGTAGGCGACGAAAAAGA 57.488 45.000 0.00 0.00 0.00 2.52
9045 19273 3.196463 TGTGTAGGCGACGAAAAAGAAA 58.804 40.909 0.00 0.00 0.00 2.52
9046 19274 3.622163 TGTGTAGGCGACGAAAAAGAAAA 59.378 39.130 0.00 0.00 0.00 2.29
9047 19275 4.273969 TGTGTAGGCGACGAAAAAGAAAAT 59.726 37.500 0.00 0.00 0.00 1.82
9049 19277 6.018098 TGTGTAGGCGACGAAAAAGAAAATAA 60.018 34.615 0.00 0.00 0.00 1.40
9050 19278 6.301607 GTGTAGGCGACGAAAAAGAAAATAAC 59.698 38.462 0.00 0.00 0.00 1.89
9052 19280 3.916172 GGCGACGAAAAAGAAAATAACCC 59.084 43.478 0.00 0.00 0.00 4.11
9053 19281 4.538917 GCGACGAAAAAGAAAATAACCCA 58.461 39.130 0.00 0.00 0.00 4.51
9054 19282 4.380678 GCGACGAAAAAGAAAATAACCCAC 59.619 41.667 0.00 0.00 0.00 4.61
9055 19283 4.609708 CGACGAAAAAGAAAATAACCCACG 59.390 41.667 0.00 0.00 0.00 4.94
9058 19286 3.291809 AAAAGAAAATAACCCACGGCG 57.708 42.857 4.80 4.80 0.00 6.46
9059 19287 2.188062 AAGAAAATAACCCACGGCGA 57.812 45.000 16.62 0.00 0.00 5.54
9060 19288 1.445871 AGAAAATAACCCACGGCGAC 58.554 50.000 16.62 0.00 0.00 5.19
9062 19290 0.961857 AAAATAACCCACGGCGACCC 60.962 55.000 16.62 0.00 0.00 4.46
9086 19314 2.555220 CGCGATCGGCAAACTATAAC 57.445 50.000 18.30 0.00 43.84 1.89
9087 19315 1.855978 CGCGATCGGCAAACTATAACA 59.144 47.619 18.30 0.00 43.84 2.41
9090 19318 4.211389 GCGATCGGCAAACTATAACAATG 58.789 43.478 18.30 0.00 42.87 2.82
9091 19319 4.025229 GCGATCGGCAAACTATAACAATGA 60.025 41.667 18.30 0.00 42.87 2.57
9092 19320 5.432157 CGATCGGCAAACTATAACAATGAC 58.568 41.667 7.38 0.00 0.00 3.06
9093 19321 5.558273 CGATCGGCAAACTATAACAATGACC 60.558 44.000 7.38 0.00 0.00 4.02
9094 19322 4.580868 TCGGCAAACTATAACAATGACCA 58.419 39.130 0.00 0.00 0.00 4.02
9095 19323 5.189928 TCGGCAAACTATAACAATGACCAT 58.810 37.500 0.00 0.00 0.00 3.55
9096 19324 6.350103 TCGGCAAACTATAACAATGACCATA 58.650 36.000 0.00 0.00 0.00 2.74
9099 19327 7.173218 CGGCAAACTATAACAATGACCATATCT 59.827 37.037 0.00 0.00 0.00 1.98
9100 19328 8.292448 GGCAAACTATAACAATGACCATATCTG 58.708 37.037 0.00 0.00 0.00 2.90
9102 19330 8.839343 CAAACTATAACAATGACCATATCTGCA 58.161 33.333 0.00 0.00 0.00 4.41
9103 19331 7.969536 ACTATAACAATGACCATATCTGCAC 57.030 36.000 0.00 0.00 0.00 4.57
9104 19332 6.936900 ACTATAACAATGACCATATCTGCACC 59.063 38.462 0.00 0.00 0.00 5.01
9105 19333 3.650281 ACAATGACCATATCTGCACCA 57.350 42.857 0.00 0.00 0.00 4.17
9107 19335 3.696051 ACAATGACCATATCTGCACCAAC 59.304 43.478 0.00 0.00 0.00 3.77
9108 19336 2.418368 TGACCATATCTGCACCAACC 57.582 50.000 0.00 0.00 0.00 3.77
9111 19339 3.457749 TGACCATATCTGCACCAACCATA 59.542 43.478 0.00 0.00 0.00 2.74
9112 19340 4.104579 TGACCATATCTGCACCAACCATAT 59.895 41.667 0.00 0.00 0.00 1.78
9113 19341 4.655963 ACCATATCTGCACCAACCATATC 58.344 43.478 0.00 0.00 0.00 1.63
9115 19343 5.222192 ACCATATCTGCACCAACCATATCAT 60.222 40.000 0.00 0.00 0.00 2.45
9118 19346 3.544684 TCTGCACCAACCATATCATGAC 58.455 45.455 0.00 0.00 0.00 3.06
9119 19347 3.054508 TCTGCACCAACCATATCATGACA 60.055 43.478 0.00 0.00 0.00 3.58
9120 19348 3.016031 TGCACCAACCATATCATGACAC 58.984 45.455 0.00 0.00 0.00 3.67
9121 19349 2.358898 GCACCAACCATATCATGACACC 59.641 50.000 0.00 0.00 0.00 4.16
9122 19350 3.619419 CACCAACCATATCATGACACCA 58.381 45.455 0.00 0.00 0.00 4.17
9123 19351 4.209538 CACCAACCATATCATGACACCAT 58.790 43.478 0.00 0.00 0.00 3.55
9131 19359 3.142124 CATGACACCATGCAGACGA 57.858 52.632 0.00 0.00 43.06 4.20
9132 19360 0.723414 CATGACACCATGCAGACGAC 59.277 55.000 0.00 0.00 43.06 4.34
9134 19362 1.080772 GACACCATGCAGACGACGA 60.081 57.895 0.00 0.00 0.00 4.20
9135 19363 1.073216 GACACCATGCAGACGACGAG 61.073 60.000 0.00 0.00 0.00 4.18
9137 19365 0.179127 CACCATGCAGACGACGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
9138 19366 0.532573 ACCATGCAGACGACGAGATT 59.467 50.000 0.00 0.00 0.00 2.40
9139 19367 1.203928 CCATGCAGACGACGAGATTC 58.796 55.000 0.00 0.00 0.00 2.52
9140 19368 1.202348 CCATGCAGACGACGAGATTCT 60.202 52.381 0.00 0.00 0.00 2.40
9141 19369 2.534298 CATGCAGACGACGAGATTCTT 58.466 47.619 0.00 0.00 0.00 2.52
9142 19370 2.264109 TGCAGACGACGAGATTCTTC 57.736 50.000 0.00 0.00 0.00 2.87
9143 19371 1.539827 TGCAGACGACGAGATTCTTCA 59.460 47.619 0.00 0.00 0.00 3.02
9145 19373 2.342948 GCAGACGACGAGATTCTTCAAC 59.657 50.000 0.00 0.00 0.00 3.18
9146 19374 3.565516 CAGACGACGAGATTCTTCAACA 58.434 45.455 0.00 0.00 0.00 3.33
9147 19375 3.605916 CAGACGACGAGATTCTTCAACAG 59.394 47.826 0.00 0.00 0.00 3.16
9149 19377 4.454847 AGACGACGAGATTCTTCAACAGTA 59.545 41.667 0.00 0.00 0.00 2.74
9150 19378 5.048921 AGACGACGAGATTCTTCAACAGTAA 60.049 40.000 0.00 0.00 0.00 2.24
9151 19379 4.916249 ACGACGAGATTCTTCAACAGTAAC 59.084 41.667 0.00 0.00 0.00 2.50
9152 19380 4.029198 CGACGAGATTCTTCAACAGTAACG 59.971 45.833 0.00 0.00 0.00 3.18
9153 19381 3.673809 ACGAGATTCTTCAACAGTAACGC 59.326 43.478 0.00 0.00 0.00 4.84
9155 19383 4.246458 GAGATTCTTCAACAGTAACGCCT 58.754 43.478 0.00 0.00 0.00 5.52
9156 19384 4.642429 AGATTCTTCAACAGTAACGCCTT 58.358 39.130 0.00 0.00 0.00 4.35
9157 19385 5.790593 AGATTCTTCAACAGTAACGCCTTA 58.209 37.500 0.00 0.00 0.00 2.69
9158 19386 6.228258 AGATTCTTCAACAGTAACGCCTTAA 58.772 36.000 0.00 0.00 0.00 1.85
9159 19387 5.662211 TTCTTCAACAGTAACGCCTTAAC 57.338 39.130 0.00 0.00 0.00 2.01
9160 19388 3.737266 TCTTCAACAGTAACGCCTTAACG 59.263 43.478 0.00 0.00 39.50 3.18
9161 19389 3.367992 TCAACAGTAACGCCTTAACGA 57.632 42.857 0.00 0.00 36.70 3.85
9162 19390 3.715495 TCAACAGTAACGCCTTAACGAA 58.285 40.909 0.00 0.00 36.70 3.85
9172 19400 3.806591 CTTAACGAAGGGAGCGACA 57.193 52.632 0.00 0.00 0.00 4.35
9173 19401 1.347320 CTTAACGAAGGGAGCGACAC 58.653 55.000 0.00 0.00 0.00 3.67
9174 19402 0.963962 TTAACGAAGGGAGCGACACT 59.036 50.000 0.00 0.00 0.00 3.55
9175 19403 0.524862 TAACGAAGGGAGCGACACTC 59.475 55.000 0.00 0.00 45.45 3.51
9182 19410 3.453465 GAGCGACACTCAAGCGTC 58.547 61.111 0.00 0.00 45.49 5.19
9186 19414 3.470567 GACACTCAAGCGTCGCCG 61.471 66.667 14.86 5.68 37.07 6.46
9188 19416 3.470567 CACTCAAGCGTCGCCGTC 61.471 66.667 14.86 0.00 36.15 4.79
9189 19417 3.973516 ACTCAAGCGTCGCCGTCA 61.974 61.111 14.86 0.00 36.15 4.35
9190 19418 3.470567 CTCAAGCGTCGCCGTCAC 61.471 66.667 14.86 0.00 36.15 3.67
9195 19423 4.796231 GCGTCGCCGTCACCAGAT 62.796 66.667 5.75 0.00 36.15 2.90
9199 19427 2.264480 CGCCGTCACCAGATCCAA 59.736 61.111 0.00 0.00 0.00 3.53
9200 19428 1.811266 CGCCGTCACCAGATCCAAG 60.811 63.158 0.00 0.00 0.00 3.61
9201 19429 2.109126 GCCGTCACCAGATCCAAGC 61.109 63.158 0.00 0.00 0.00 4.01
9202 19430 1.296392 CCGTCACCAGATCCAAGCA 59.704 57.895 0.00 0.00 0.00 3.91
9203 19431 1.021390 CCGTCACCAGATCCAAGCAC 61.021 60.000 0.00 0.00 0.00 4.40
9204 19432 1.021390 CGTCACCAGATCCAAGCACC 61.021 60.000 0.00 0.00 0.00 5.01
9205 19433 0.678048 GTCACCAGATCCAAGCACCC 60.678 60.000 0.00 0.00 0.00 4.61
9206 19434 1.133181 TCACCAGATCCAAGCACCCA 61.133 55.000 0.00 0.00 0.00 4.51
9207 19435 0.033796 CACCAGATCCAAGCACCCAT 60.034 55.000 0.00 0.00 0.00 4.00
9208 19436 0.033796 ACCAGATCCAAGCACCCATG 60.034 55.000 0.00 0.00 0.00 3.66
9209 19437 0.754217 CCAGATCCAAGCACCCATGG 60.754 60.000 4.14 4.14 38.09 3.66
9210 19438 1.076485 AGATCCAAGCACCCATGGC 60.076 57.895 6.09 0.00 36.62 4.40
9212 19440 1.380785 ATCCAAGCACCCATGGCAG 60.381 57.895 6.09 1.18 36.62 4.85
9216 19444 0.458669 CAAGCACCCATGGCAGAATC 59.541 55.000 6.09 0.00 0.00 2.52
9218 19446 1.216064 AGCACCCATGGCAGAATCTA 58.784 50.000 6.09 0.00 0.00 1.98
9219 19447 1.142465 AGCACCCATGGCAGAATCTAG 59.858 52.381 6.09 0.00 0.00 2.43
9220 19448 1.816961 GCACCCATGGCAGAATCTAGG 60.817 57.143 6.09 0.00 0.00 3.02
9221 19449 1.492176 CACCCATGGCAGAATCTAGGT 59.508 52.381 6.09 0.00 0.00 3.08
9222 19450 2.092212 CACCCATGGCAGAATCTAGGTT 60.092 50.000 6.09 0.00 0.00 3.50
9225 19453 3.633986 CCCATGGCAGAATCTAGGTTTTC 59.366 47.826 6.09 0.00 0.00 2.29
9227 19455 4.096984 CCATGGCAGAATCTAGGTTTTCAC 59.903 45.833 0.00 0.00 0.00 3.18
9228 19456 3.686016 TGGCAGAATCTAGGTTTTCACC 58.314 45.455 0.00 0.00 44.67 4.02
9229 19457 3.017442 GGCAGAATCTAGGTTTTCACCC 58.983 50.000 0.00 0.00 45.63 4.61
9231 19459 3.691609 GCAGAATCTAGGTTTTCACCCTG 59.308 47.826 0.00 0.00 45.63 4.45
9232 19460 4.565652 GCAGAATCTAGGTTTTCACCCTGA 60.566 45.833 4.50 0.00 45.63 3.86
9233 19461 5.560724 CAGAATCTAGGTTTTCACCCTGAA 58.439 41.667 0.00 0.00 45.63 3.02
9234 19462 5.645497 CAGAATCTAGGTTTTCACCCTGAAG 59.355 44.000 0.00 0.00 45.63 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 8.245195 TGGTTTTCTCCTTTTATTAACAGCTT 57.755 30.769 0.00 0.00 0.00 3.74
10 11 7.724061 TCTGGTTTTCTCCTTTTATTAACAGCT 59.276 33.333 0.00 0.00 0.00 4.24
11 12 7.882179 TCTGGTTTTCTCCTTTTATTAACAGC 58.118 34.615 0.00 0.00 0.00 4.40
15 16 9.758651 GCTTTTCTGGTTTTCTCCTTTTATTAA 57.241 29.630 0.00 0.00 0.00 1.40
17 18 7.928167 CAGCTTTTCTGGTTTTCTCCTTTTATT 59.072 33.333 0.00 0.00 39.15 1.40
18 19 7.436933 CAGCTTTTCTGGTTTTCTCCTTTTAT 58.563 34.615 0.00 0.00 39.15 1.40
19 20 6.682861 GCAGCTTTTCTGGTTTTCTCCTTTTA 60.683 38.462 0.00 0.00 43.06 1.52
20 21 5.664457 CAGCTTTTCTGGTTTTCTCCTTTT 58.336 37.500 0.00 0.00 39.15 2.27
21 22 4.442052 GCAGCTTTTCTGGTTTTCTCCTTT 60.442 41.667 0.00 0.00 43.06 3.11
22 23 3.068732 GCAGCTTTTCTGGTTTTCTCCTT 59.931 43.478 0.00 0.00 43.06 3.36
23 24 2.625314 GCAGCTTTTCTGGTTTTCTCCT 59.375 45.455 0.00 0.00 43.06 3.69
24 25 2.362077 TGCAGCTTTTCTGGTTTTCTCC 59.638 45.455 0.00 0.00 43.06 3.71
26 27 5.302823 ACTTATGCAGCTTTTCTGGTTTTCT 59.697 36.000 0.00 0.00 43.06 2.52
27 28 5.532557 ACTTATGCAGCTTTTCTGGTTTTC 58.467 37.500 0.00 0.00 43.06 2.29
29 30 5.291971 CAACTTATGCAGCTTTTCTGGTTT 58.708 37.500 0.00 0.00 43.06 3.27
30 31 4.874970 CAACTTATGCAGCTTTTCTGGTT 58.125 39.130 0.00 0.00 43.06 3.67
31 32 4.510038 CAACTTATGCAGCTTTTCTGGT 57.490 40.909 0.00 0.00 43.06 4.00
44 45 1.864750 GCGCTGCGTGCAACTTATG 60.865 57.895 24.04 0.00 43.06 1.90
46 47 2.969781 TGCGCTGCGTGCAACTTA 60.970 55.556 24.04 0.00 46.28 2.24
53 54 1.439365 GAGAGTTTTGCGCTGCGTG 60.439 57.895 24.04 0.00 0.00 5.34
54 55 1.560860 GAGAGAGTTTTGCGCTGCGT 61.561 55.000 24.04 1.46 0.00 5.24
57 58 1.725706 CAGAGAGAGAGTTTTGCGCTG 59.274 52.381 9.73 0.00 0.00 5.18
58 59 1.615883 TCAGAGAGAGAGTTTTGCGCT 59.384 47.619 9.73 0.00 0.00 5.92
59 60 2.071688 TCAGAGAGAGAGTTTTGCGC 57.928 50.000 0.00 0.00 0.00 6.09
60 61 3.367327 CACATCAGAGAGAGAGTTTTGCG 59.633 47.826 0.00 0.00 0.00 4.85
61 62 4.152045 CACACATCAGAGAGAGAGTTTTGC 59.848 45.833 0.00 0.00 0.00 3.68
62 63 5.177142 CACACACATCAGAGAGAGAGTTTTG 59.823 44.000 0.00 0.00 0.00 2.44
63 64 5.163364 ACACACACATCAGAGAGAGAGTTTT 60.163 40.000 0.00 0.00 0.00 2.43
64 65 4.343526 ACACACACATCAGAGAGAGAGTTT 59.656 41.667 0.00 0.00 0.00 2.66
65 66 3.894427 ACACACACATCAGAGAGAGAGTT 59.106 43.478 0.00 0.00 0.00 3.01
66 67 3.255395 CACACACACATCAGAGAGAGAGT 59.745 47.826 0.00 0.00 0.00 3.24
67 68 3.505293 TCACACACACATCAGAGAGAGAG 59.495 47.826 0.00 0.00 0.00 3.20
68 69 3.490348 TCACACACACATCAGAGAGAGA 58.510 45.455 0.00 0.00 0.00 3.10
69 70 3.255395 ACTCACACACACATCAGAGAGAG 59.745 47.826 0.00 0.00 0.00 3.20
70 71 3.225940 ACTCACACACACATCAGAGAGA 58.774 45.455 0.00 0.00 0.00 3.10
73 74 3.721035 TGAACTCACACACACATCAGAG 58.279 45.455 0.00 0.00 0.00 3.35
74 75 3.817709 TGAACTCACACACACATCAGA 57.182 42.857 0.00 0.00 0.00 3.27
75 76 3.122445 CGATGAACTCACACACACATCAG 59.878 47.826 0.00 0.00 35.39 2.90
76 77 3.059166 CGATGAACTCACACACACATCA 58.941 45.455 0.00 0.00 35.39 3.07
77 78 3.059884 ACGATGAACTCACACACACATC 58.940 45.455 0.00 0.00 0.00 3.06
78 79 3.059884 GACGATGAACTCACACACACAT 58.940 45.455 0.00 0.00 0.00 3.21
79 80 2.100749 AGACGATGAACTCACACACACA 59.899 45.455 0.00 0.00 0.00 3.72
80 81 2.472861 CAGACGATGAACTCACACACAC 59.527 50.000 0.00 0.00 0.00 3.82
81 82 2.360801 TCAGACGATGAACTCACACACA 59.639 45.455 0.00 0.00 34.02 3.72
82 83 3.013276 TCAGACGATGAACTCACACAC 57.987 47.619 0.00 0.00 34.02 3.82
92 93 3.521560 CGGGAAAGAATTCAGACGATGA 58.478 45.455 8.44 0.00 37.29 2.92
93 94 2.609459 CCGGGAAAGAATTCAGACGATG 59.391 50.000 8.44 0.00 37.29 3.84
95 96 1.621814 ACCGGGAAAGAATTCAGACGA 59.378 47.619 6.32 0.00 37.29 4.20
96 97 2.094762 ACCGGGAAAGAATTCAGACG 57.905 50.000 6.32 4.83 37.29 4.18
97 98 3.408634 TGAACCGGGAAAGAATTCAGAC 58.591 45.455 6.32 0.00 37.29 3.51
98 99 3.674997 CTGAACCGGGAAAGAATTCAGA 58.325 45.455 18.93 0.00 45.96 3.27
99 100 2.162408 GCTGAACCGGGAAAGAATTCAG 59.838 50.000 19.23 19.23 45.88 3.02
101 102 2.437413 AGCTGAACCGGGAAAGAATTC 58.563 47.619 6.32 0.00 34.66 2.17
102 103 2.586648 AGCTGAACCGGGAAAGAATT 57.413 45.000 6.32 0.00 0.00 2.17
103 104 2.304761 TGTAGCTGAACCGGGAAAGAAT 59.695 45.455 6.32 0.00 0.00 2.40
104 105 1.695242 TGTAGCTGAACCGGGAAAGAA 59.305 47.619 6.32 0.00 0.00 2.52
105 106 1.344065 TGTAGCTGAACCGGGAAAGA 58.656 50.000 6.32 0.00 0.00 2.52
106 107 1.804748 GTTGTAGCTGAACCGGGAAAG 59.195 52.381 6.32 0.00 0.00 2.62
107 108 1.141254 TGTTGTAGCTGAACCGGGAAA 59.859 47.619 6.32 0.00 0.00 3.13
108 109 0.759959 TGTTGTAGCTGAACCGGGAA 59.240 50.000 6.32 0.00 0.00 3.97
109 110 0.759959 TTGTTGTAGCTGAACCGGGA 59.240 50.000 6.32 0.00 0.00 5.14
110 111 1.156736 CTTGTTGTAGCTGAACCGGG 58.843 55.000 6.32 0.00 0.00 5.73
111 112 0.517316 GCTTGTTGTAGCTGAACCGG 59.483 55.000 0.00 0.00 38.15 5.28
112 113 0.517316 GGCTTGTTGTAGCTGAACCG 59.483 55.000 0.00 0.00 40.99 4.44
114 115 2.357637 TGTTGGCTTGTTGTAGCTGAAC 59.642 45.455 0.00 0.00 40.99 3.18
117 118 2.553602 TGATGTTGGCTTGTTGTAGCTG 59.446 45.455 0.00 0.00 40.99 4.24
118 119 2.862541 TGATGTTGGCTTGTTGTAGCT 58.137 42.857 0.00 0.00 40.99 3.32
119 120 3.191162 TGATGATGTTGGCTTGTTGTAGC 59.809 43.478 0.00 0.00 40.48 3.58
122 123 3.615592 GCATGATGATGTTGGCTTGTTGT 60.616 43.478 0.00 0.00 31.50 3.32
123 124 2.927477 GCATGATGATGTTGGCTTGTTG 59.073 45.455 0.00 0.00 31.50 3.33
124 125 2.829720 AGCATGATGATGTTGGCTTGTT 59.170 40.909 0.00 0.00 31.50 2.83
125 126 2.426024 GAGCATGATGATGTTGGCTTGT 59.574 45.455 0.00 0.00 31.50 3.16
126 127 2.425668 TGAGCATGATGATGTTGGCTTG 59.574 45.455 0.00 0.00 31.50 4.01
127 128 2.688446 CTGAGCATGATGATGTTGGCTT 59.312 45.455 0.00 0.00 31.50 4.35
128 129 2.298610 CTGAGCATGATGATGTTGGCT 58.701 47.619 0.00 0.00 31.50 4.75
129 130 1.269102 GCTGAGCATGATGATGTTGGC 60.269 52.381 0.00 0.00 31.50 4.52
130 131 2.290916 GAGCTGAGCATGATGATGTTGG 59.709 50.000 7.39 0.00 31.50 3.77
131 132 2.290916 GGAGCTGAGCATGATGATGTTG 59.709 50.000 7.39 0.00 31.50 3.33
132 133 2.172930 AGGAGCTGAGCATGATGATGTT 59.827 45.455 7.39 0.00 31.50 2.71
173 5147 5.348164 TGTAGTTACCATGTGATGATGACG 58.652 41.667 0.00 0.00 0.00 4.35
230 5210 5.450818 TTTCTATAAGAAGTGGGCCATGT 57.549 39.130 10.70 0.00 35.37 3.21
258 5238 0.598065 AAAGGATGCACAACCTTCGC 59.402 50.000 17.88 0.00 44.44 4.70
272 5252 4.957954 TCGCCCTAGTAAGATAACAAAGGA 59.042 41.667 0.00 0.00 30.27 3.36
512 5498 3.763057 TCCTAAAAGAACTGGAAAGGCC 58.237 45.455 0.00 0.00 37.10 5.19
518 5504 5.104277 TGACACCTTTCCTAAAAGAACTGGA 60.104 40.000 0.00 0.00 43.90 3.86
519 5505 5.008712 GTGACACCTTTCCTAAAAGAACTGG 59.991 44.000 0.00 0.00 43.90 4.00
520 5506 5.008712 GGTGACACCTTTCCTAAAAGAACTG 59.991 44.000 17.84 0.00 43.90 3.16
521 5507 5.131067 GGTGACACCTTTCCTAAAAGAACT 58.869 41.667 17.84 0.00 43.90 3.01
522 5508 5.434352 GGTGACACCTTTCCTAAAAGAAC 57.566 43.478 17.84 0.00 43.90 3.01
875 5970 3.570926 TTAGTGTCAACGGAGCTACTG 57.429 47.619 0.00 0.00 0.00 2.74
2500 8538 0.388391 GTGCATGCGCTGGCTTAAAA 60.388 50.000 23.77 0.00 40.82 1.52
2698 9111 8.595362 TGTAGTTGAGGAATCATTTCTAGAGA 57.405 34.615 0.00 0.00 32.16 3.10
2699 9112 9.658799 TTTGTAGTTGAGGAATCATTTCTAGAG 57.341 33.333 0.00 0.00 32.16 2.43
2761 9183 3.668757 GCCGTTTGAGGGACGAAAAATAC 60.669 47.826 0.00 0.00 42.82 1.89
2796 9218 5.620206 TCAAAACCATGTCATGTCAGTACT 58.380 37.500 11.84 0.00 0.00 2.73
2864 9307 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3597 10520 1.168407 CGCCACATCATCATCCACCC 61.168 60.000 0.00 0.00 0.00 4.61
3655 10579 1.202927 TCCCTCAAAAGGCTTCAGGTG 60.203 52.381 15.18 6.51 41.85 4.00
3926 11619 5.523916 GCTGATATTTTCGCGTCCCATATAT 59.476 40.000 5.77 2.63 0.00 0.86
3931 11624 1.134521 AGCTGATATTTTCGCGTCCCA 60.135 47.619 5.77 0.00 0.00 4.37
3932 11625 1.583054 AGCTGATATTTTCGCGTCCC 58.417 50.000 5.77 0.00 0.00 4.46
3933 11626 3.802685 ACTTAGCTGATATTTTCGCGTCC 59.197 43.478 5.77 0.00 0.00 4.79
3934 11627 4.267928 ACACTTAGCTGATATTTTCGCGTC 59.732 41.667 5.77 0.00 0.00 5.19
3935 11628 4.181578 ACACTTAGCTGATATTTTCGCGT 58.818 39.130 5.77 0.00 0.00 6.01
3936 11629 4.778842 ACACTTAGCTGATATTTTCGCG 57.221 40.909 0.00 0.00 0.00 5.87
3937 11630 5.064707 TGGAACACTTAGCTGATATTTTCGC 59.935 40.000 0.00 0.00 0.00 4.70
3938 11631 6.662414 TGGAACACTTAGCTGATATTTTCG 57.338 37.500 0.00 0.00 0.00 3.46
3977 11670 1.731424 CGTGTCGGCGGGCTATATAAG 60.731 57.143 7.21 0.00 0.00 1.73
3978 11671 0.241749 CGTGTCGGCGGGCTATATAA 59.758 55.000 7.21 0.00 0.00 0.98
4050 11743 2.632987 AAACACTCGGCTTGTAGGTT 57.367 45.000 0.00 0.00 0.00 3.50
4219 11919 1.944709 AGTGGTTTTCTGTACGCCAAC 59.055 47.619 0.00 0.00 0.00 3.77
4291 11991 4.071423 TGCACCAACTAGTACGTACACTA 58.929 43.478 26.55 12.73 0.00 2.74
4292 11992 2.886523 TGCACCAACTAGTACGTACACT 59.113 45.455 26.55 12.22 0.00 3.55
4533 12246 5.125417 GCACTCCAAATGTATTGGCTCTTAA 59.875 40.000 2.32 0.00 39.38 1.85
4561 12274 7.878127 AGTAGTACATGCAGTATGAAACAACTT 59.122 33.333 5.36 0.00 39.69 2.66
4767 12485 4.141528 TGGGATGATTTGTGCCAAACTTTT 60.142 37.500 2.96 0.00 33.87 2.27
4981 12700 7.907214 ACTATTCTACAAGGATCACACAAAC 57.093 36.000 0.00 0.00 0.00 2.93
5061 12781 4.349663 TTTCCGAAAAGATAATGGCACG 57.650 40.909 0.00 0.00 0.00 5.34
5176 12896 6.945435 TCATGAAATTTTAAGGTAGCCAGACA 59.055 34.615 0.00 0.00 0.00 3.41
5224 12944 7.707774 AAAAATTTCACTTTTGTATGGACCG 57.292 32.000 0.00 0.00 0.00 4.79
5379 13100 6.857437 AACTTAGCCTTGCCTAAATCATTT 57.143 33.333 0.00 0.00 0.00 2.32
5411 13132 7.559533 TGACCAAGGCACATAATTATACACAAT 59.440 33.333 0.00 0.00 0.00 2.71
5442 13164 8.795842 TTCATGTAAGGTGTATAATTTTCGGT 57.204 30.769 0.00 0.00 0.00 4.69
5465 13187 5.963594 ACTTTATACTCACTCCGTTCCTTC 58.036 41.667 0.00 0.00 0.00 3.46
5472 13194 9.666626 CTCAATAAGTACTTTATACTCACTCCG 57.333 37.037 14.49 0.00 31.68 4.63
5552 13274 5.419788 AGAGAGATTTGGTTTGCATTGCATA 59.580 36.000 12.95 4.75 38.76 3.14
5711 13433 0.107214 TTGACGGAGGGGCAATGATC 60.107 55.000 0.00 0.00 0.00 2.92
5760 13482 2.621526 TCAACACGAGACTTCTGCACTA 59.378 45.455 0.00 0.00 0.00 2.74
5764 13486 0.787183 GCTCAACACGAGACTTCTGC 59.213 55.000 0.00 0.00 45.45 4.26
5820 13542 3.439129 TCGAGCTACGTTTCTCTTCATCA 59.561 43.478 12.78 0.00 43.13 3.07
5977 13699 1.734477 CTGCTGTCTCGGTGGTTCG 60.734 63.158 0.00 0.00 0.00 3.95
6104 13826 0.685097 CTTGTCGAAGGAAGGGGTCA 59.315 55.000 0.00 0.00 0.00 4.02
6163 13885 2.388735 TCATTGGTATGCCTCGTCTCT 58.611 47.619 0.16 0.00 35.27 3.10
6229 13951 4.336889 AGTGAGGAATCGAACTCAAACA 57.663 40.909 16.26 4.05 44.53 2.83
6232 13954 6.697395 TGAATTAGTGAGGAATCGAACTCAA 58.303 36.000 16.26 5.35 44.53 3.02
6239 13961 6.094048 ACAAACCATGAATTAGTGAGGAATCG 59.906 38.462 0.00 0.00 0.00 3.34
6411 14133 4.622740 GCTTTGAAGATGCGCTAAACAATT 59.377 37.500 9.73 0.00 0.00 2.32
6560 14283 1.959710 TGTATGGTTGCCTCTACCCA 58.040 50.000 0.00 0.00 34.66 4.51
6584 14307 6.415573 AGTACTCCTCTCTTTTCTCTCTCTC 58.584 44.000 0.00 0.00 0.00 3.20
6585 14308 6.388619 AGTACTCCTCTCTTTTCTCTCTCT 57.611 41.667 0.00 0.00 0.00 3.10
6611 14334 5.241506 CACTTGACCAACAATAAGTCACCAT 59.758 40.000 0.00 0.00 40.10 3.55
6617 14340 5.385198 ACATCCACTTGACCAACAATAAGT 58.615 37.500 0.00 0.00 37.88 2.24
6621 14344 3.157087 GGACATCCACTTGACCAACAAT 58.843 45.455 0.00 0.00 35.43 2.71
6781 14506 5.238650 CCAAAGGAAACTCTTAAAGCTTCGA 59.761 40.000 0.00 0.00 42.68 3.71
6880 14605 7.531857 AACCATACATCATTTGTTAACCACA 57.468 32.000 2.48 0.00 39.87 4.17
6928 14738 3.008049 AGTGAAGGTGGCAAGGTAGTAAG 59.992 47.826 0.00 0.00 0.00 2.34
7153 14966 8.917088 CAAAATTTAGTATGGAGGTTGATGGAT 58.083 33.333 0.00 0.00 0.00 3.41
7387 15213 2.949447 TGGCTTGAGCTTCTCCTTTTT 58.051 42.857 2.66 0.00 41.70 1.94
7620 15446 5.843673 TGCAGAGAAACTCATAGACTAGG 57.156 43.478 0.00 0.00 32.06 3.02
7697 15523 2.477189 GCGGCAATACTTAAACGCACAT 60.477 45.455 0.00 0.00 45.57 3.21
7857 15683 3.726235 CAGTATGTTGTATGTCTCTCGCG 59.274 47.826 0.00 0.00 0.00 5.87
7950 15776 5.063880 ACAACTCCAAAACTGTAGACATCC 58.936 41.667 0.00 0.00 0.00 3.51
8278 16104 6.309389 AGTCACTTATTATTTTCGACCCCT 57.691 37.500 0.00 0.00 0.00 4.79
8297 16127 0.468226 GATTGCCCCGTCCATAGTCA 59.532 55.000 0.00 0.00 0.00 3.41
8307 16137 3.594603 ATAAGATAGACGATTGCCCCG 57.405 47.619 0.00 0.00 0.00 5.73
8394 16230 5.348724 CACGCAGTTACACAGAGATACATTT 59.651 40.000 0.00 0.00 41.61 2.32
8530 16397 4.455877 GGTACTTTCACTGGAGACCATTTG 59.544 45.833 0.00 0.00 30.82 2.32
8857 19085 5.346181 AAAATCCACCCTTTGTCGAAAAA 57.654 34.783 0.00 0.00 0.00 1.94
8858 19086 6.658188 ATAAAATCCACCCTTTGTCGAAAA 57.342 33.333 0.00 0.00 0.00 2.29
8859 19087 6.658188 AATAAAATCCACCCTTTGTCGAAA 57.342 33.333 0.00 0.00 0.00 3.46
8860 19088 6.127842 GCTAATAAAATCCACCCTTTGTCGAA 60.128 38.462 0.00 0.00 0.00 3.71
8861 19089 5.355910 GCTAATAAAATCCACCCTTTGTCGA 59.644 40.000 0.00 0.00 0.00 4.20
8862 19090 5.357032 AGCTAATAAAATCCACCCTTTGTCG 59.643 40.000 0.00 0.00 0.00 4.35
8864 19092 6.252995 TGAGCTAATAAAATCCACCCTTTGT 58.747 36.000 0.00 0.00 0.00 2.83
8865 19093 6.773976 TGAGCTAATAAAATCCACCCTTTG 57.226 37.500 0.00 0.00 0.00 2.77
8866 19094 7.454694 AGTTTGAGCTAATAAAATCCACCCTTT 59.545 33.333 0.00 0.00 0.00 3.11
8867 19095 6.954102 AGTTTGAGCTAATAAAATCCACCCTT 59.046 34.615 0.00 0.00 0.00 3.95
8868 19096 6.378280 CAGTTTGAGCTAATAAAATCCACCCT 59.622 38.462 0.00 0.00 0.00 4.34
8869 19097 6.377146 TCAGTTTGAGCTAATAAAATCCACCC 59.623 38.462 0.00 0.00 0.00 4.61
8870 19098 7.391148 TCAGTTTGAGCTAATAAAATCCACC 57.609 36.000 0.00 0.00 0.00 4.61
8871 19099 8.515414 ACTTCAGTTTGAGCTAATAAAATCCAC 58.485 33.333 0.00 0.00 0.00 4.02
8872 19100 8.635765 ACTTCAGTTTGAGCTAATAAAATCCA 57.364 30.769 0.00 0.00 0.00 3.41
8873 19101 9.989869 GTACTTCAGTTTGAGCTAATAAAATCC 57.010 33.333 0.00 0.00 0.00 3.01
8874 19102 9.989869 GGTACTTCAGTTTGAGCTAATAAAATC 57.010 33.333 0.00 0.00 0.00 2.17
8875 19103 9.515226 TGGTACTTCAGTTTGAGCTAATAAAAT 57.485 29.630 0.00 0.00 0.00 1.82
8877 19105 8.911918 TTGGTACTTCAGTTTGAGCTAATAAA 57.088 30.769 0.00 0.00 0.00 1.40
8878 19106 8.911918 TTTGGTACTTCAGTTTGAGCTAATAA 57.088 30.769 0.00 0.00 0.00 1.40
8879 19107 8.911918 TTTTGGTACTTCAGTTTGAGCTAATA 57.088 30.769 0.00 0.00 0.00 0.98
8880 19108 7.719633 TCTTTTGGTACTTCAGTTTGAGCTAAT 59.280 33.333 0.00 0.00 0.00 1.73
8881 19109 7.051623 TCTTTTGGTACTTCAGTTTGAGCTAA 58.948 34.615 0.00 0.00 0.00 3.09
8884 19112 5.751243 TCTTTTGGTACTTCAGTTTGAGC 57.249 39.130 0.00 0.00 0.00 4.26
8887 19115 9.796120 TTTGTATTCTTTTGGTACTTCAGTTTG 57.204 29.630 0.00 0.00 0.00 2.93
8888 19116 9.797556 GTTTGTATTCTTTTGGTACTTCAGTTT 57.202 29.630 0.00 0.00 0.00 2.66
8890 19118 8.514330 TGTTTGTATTCTTTTGGTACTTCAGT 57.486 30.769 0.00 0.00 0.00 3.41
8904 19132 8.296713 GGTGTGTGTTCATTATGTTTGTATTCT 58.703 33.333 0.00 0.00 0.00 2.40
8905 19133 7.540745 GGGTGTGTGTTCATTATGTTTGTATTC 59.459 37.037 0.00 0.00 0.00 1.75
8906 19134 7.375053 GGGTGTGTGTTCATTATGTTTGTATT 58.625 34.615 0.00 0.00 0.00 1.89
8907 19135 6.348950 CGGGTGTGTGTTCATTATGTTTGTAT 60.349 38.462 0.00 0.00 0.00 2.29
8909 19137 4.261405 CGGGTGTGTGTTCATTATGTTTGT 60.261 41.667 0.00 0.00 0.00 2.83
8910 19138 4.225984 CGGGTGTGTGTTCATTATGTTTG 58.774 43.478 0.00 0.00 0.00 2.93
8911 19139 3.254657 CCGGGTGTGTGTTCATTATGTTT 59.745 43.478 0.00 0.00 0.00 2.83
8912 19140 2.817258 CCGGGTGTGTGTTCATTATGTT 59.183 45.455 0.00 0.00 0.00 2.71
8913 19141 2.432444 CCGGGTGTGTGTTCATTATGT 58.568 47.619 0.00 0.00 0.00 2.29
8914 19142 1.132262 GCCGGGTGTGTGTTCATTATG 59.868 52.381 2.18 0.00 0.00 1.90
8915 19143 1.459450 GCCGGGTGTGTGTTCATTAT 58.541 50.000 2.18 0.00 0.00 1.28
8916 19144 0.606944 GGCCGGGTGTGTGTTCATTA 60.607 55.000 2.18 0.00 0.00 1.90
8919 19147 3.469863 GAGGCCGGGTGTGTGTTCA 62.470 63.158 2.18 0.00 0.00 3.18
8920 19148 1.823169 TAGAGGCCGGGTGTGTGTTC 61.823 60.000 2.18 0.00 0.00 3.18
8921 19149 1.198759 ATAGAGGCCGGGTGTGTGTT 61.199 55.000 2.18 0.00 0.00 3.32
8922 19150 0.324923 TATAGAGGCCGGGTGTGTGT 60.325 55.000 2.18 0.00 0.00 3.72
8923 19151 0.389391 CTATAGAGGCCGGGTGTGTG 59.611 60.000 2.18 0.00 0.00 3.82
8924 19152 1.400530 GCTATAGAGGCCGGGTGTGT 61.401 60.000 2.18 0.00 0.00 3.72
8925 19153 1.115930 AGCTATAGAGGCCGGGTGTG 61.116 60.000 2.18 0.00 0.00 3.82
8927 19155 0.889306 GTAGCTATAGAGGCCGGGTG 59.111 60.000 2.18 0.00 0.00 4.61
8928 19156 0.481567 TGTAGCTATAGAGGCCGGGT 59.518 55.000 2.18 0.00 0.00 5.28
8931 19159 3.944055 ACATTGTAGCTATAGAGGCCG 57.056 47.619 3.21 0.00 0.00 6.13
8933 19161 6.975772 GCTATGTACATTGTAGCTATAGAGGC 59.024 42.308 14.77 0.00 38.20 4.70
8935 19163 8.056407 TGGCTATGTACATTGTAGCTATAGAG 57.944 38.462 22.29 8.67 40.43 2.43
8936 19164 8.304596 GTTGGCTATGTACATTGTAGCTATAGA 58.695 37.037 22.29 5.50 40.43 1.98
8937 19165 8.088365 TGTTGGCTATGTACATTGTAGCTATAG 58.912 37.037 22.29 9.70 40.43 1.31
8938 19166 7.870954 GTGTTGGCTATGTACATTGTAGCTATA 59.129 37.037 22.29 10.61 40.43 1.31
8939 19167 6.706270 GTGTTGGCTATGTACATTGTAGCTAT 59.294 38.462 22.29 0.00 40.43 2.97
8940 19168 6.046593 GTGTTGGCTATGTACATTGTAGCTA 58.953 40.000 22.29 16.68 40.43 3.32
8942 19170 4.035208 GGTGTTGGCTATGTACATTGTAGC 59.965 45.833 14.77 16.29 39.98 3.58
8945 19173 4.027674 TGGTGTTGGCTATGTACATTGT 57.972 40.909 14.77 0.00 0.00 2.71
8947 19175 4.142182 GCATTGGTGTTGGCTATGTACATT 60.142 41.667 14.77 0.00 0.00 2.71
8949 19177 2.752354 GCATTGGTGTTGGCTATGTACA 59.248 45.455 0.00 0.00 0.00 2.90
8953 19181 1.545136 TGTGCATTGGTGTTGGCTATG 59.455 47.619 0.00 0.00 0.00 2.23
8954 19182 1.545582 GTGTGCATTGGTGTTGGCTAT 59.454 47.619 0.00 0.00 0.00 2.97
8955 19183 0.958091 GTGTGCATTGGTGTTGGCTA 59.042 50.000 0.00 0.00 0.00 3.93
8956 19184 1.042003 TGTGTGCATTGGTGTTGGCT 61.042 50.000 0.00 0.00 0.00 4.75
8957 19185 0.875474 GTGTGTGCATTGGTGTTGGC 60.875 55.000 0.00 0.00 0.00 4.52
8959 19187 1.135170 TGTGTGTGTGCATTGGTGTTG 60.135 47.619 0.00 0.00 0.00 3.33
8960 19188 1.135141 GTGTGTGTGTGCATTGGTGTT 60.135 47.619 0.00 0.00 0.00 3.32
8961 19189 0.455410 GTGTGTGTGTGCATTGGTGT 59.545 50.000 0.00 0.00 0.00 4.16
8963 19191 1.401761 ATGTGTGTGTGTGCATTGGT 58.598 45.000 0.00 0.00 0.00 3.67
8964 19192 3.639716 TTATGTGTGTGTGTGCATTGG 57.360 42.857 0.00 0.00 0.00 3.16
8965 19193 5.554138 CGTTTTTATGTGTGTGTGTGCATTG 60.554 40.000 0.00 0.00 0.00 2.82
8968 19196 3.430008 CGTTTTTATGTGTGTGTGTGCA 58.570 40.909 0.00 0.00 0.00 4.57
8970 19198 2.786578 GGCGTTTTTATGTGTGTGTGTG 59.213 45.455 0.00 0.00 0.00 3.82
8971 19199 2.539953 CGGCGTTTTTATGTGTGTGTGT 60.540 45.455 0.00 0.00 0.00 3.72
8972 19200 2.040524 CGGCGTTTTTATGTGTGTGTG 58.959 47.619 0.00 0.00 0.00 3.82
8973 19201 1.002251 CCGGCGTTTTTATGTGTGTGT 60.002 47.619 6.01 0.00 0.00 3.72
8974 19202 1.680668 CCGGCGTTTTTATGTGTGTG 58.319 50.000 6.01 0.00 0.00 3.82
8975 19203 0.039888 GCCGGCGTTTTTATGTGTGT 60.040 50.000 12.58 0.00 0.00 3.72
8976 19204 0.039978 TGCCGGCGTTTTTATGTGTG 60.040 50.000 23.90 0.00 0.00 3.82
8978 19206 1.772182 TTTGCCGGCGTTTTTATGTG 58.228 45.000 23.90 0.00 0.00 3.21
8981 19209 2.164624 TGCTATTTGCCGGCGTTTTTAT 59.835 40.909 23.90 10.61 42.00 1.40
8983 19211 0.315568 TGCTATTTGCCGGCGTTTTT 59.684 45.000 23.90 7.19 42.00 1.94
8985 19213 0.315568 TTTGCTATTTGCCGGCGTTT 59.684 45.000 23.90 11.14 42.00 3.60
8986 19214 0.109319 CTTTGCTATTTGCCGGCGTT 60.109 50.000 23.90 11.55 42.00 4.84
8987 19215 1.241315 ACTTTGCTATTTGCCGGCGT 61.241 50.000 23.90 13.13 42.00 5.68
8988 19216 0.523335 GACTTTGCTATTTGCCGGCG 60.523 55.000 23.90 8.09 42.00 6.46
8990 19218 4.836125 ATATGACTTTGCTATTTGCCGG 57.164 40.909 0.00 0.00 42.00 6.13
8991 19219 7.072030 GTCTTATATGACTTTGCTATTTGCCG 58.928 38.462 10.70 0.00 36.08 5.69
8992 19220 7.013274 TGGTCTTATATGACTTTGCTATTTGCC 59.987 37.037 15.98 0.00 37.72 4.52
8993 19221 7.930217 TGGTCTTATATGACTTTGCTATTTGC 58.070 34.615 15.98 0.00 38.36 3.68
8996 19224 9.686683 AGTTTGGTCTTATATGACTTTGCTATT 57.313 29.630 15.98 0.00 37.16 1.73
8999 19227 9.113838 CATAGTTTGGTCTTATATGACTTTGCT 57.886 33.333 15.98 12.17 37.16 3.91
9000 19228 8.893727 ACATAGTTTGGTCTTATATGACTTTGC 58.106 33.333 15.98 7.07 37.16 3.68
9002 19230 9.959721 ACACATAGTTTGGTCTTATATGACTTT 57.040 29.630 15.98 3.73 37.16 2.66
9005 19233 9.477484 CCTACACATAGTTTGGTCTTATATGAC 57.523 37.037 9.70 9.70 36.31 3.06
9006 19234 8.148351 GCCTACACATAGTTTGGTCTTATATGA 58.852 37.037 0.00 0.00 0.00 2.15
9007 19235 7.116376 CGCCTACACATAGTTTGGTCTTATATG 59.884 40.741 0.00 0.00 0.00 1.78
9008 19236 7.014905 TCGCCTACACATAGTTTGGTCTTATAT 59.985 37.037 0.00 0.00 0.00 0.86
9009 19237 6.321945 TCGCCTACACATAGTTTGGTCTTATA 59.678 38.462 0.00 0.00 0.00 0.98
9011 19239 4.463539 TCGCCTACACATAGTTTGGTCTTA 59.536 41.667 0.00 0.00 0.00 2.10
9012 19240 3.259876 TCGCCTACACATAGTTTGGTCTT 59.740 43.478 0.00 0.00 0.00 3.01
9015 19243 2.673043 CGTCGCCTACACATAGTTTGGT 60.673 50.000 0.00 0.00 0.00 3.67
9016 19244 1.924524 CGTCGCCTACACATAGTTTGG 59.075 52.381 0.00 0.00 0.00 3.28
9017 19245 2.871133 TCGTCGCCTACACATAGTTTG 58.129 47.619 0.00 0.00 0.00 2.93
9019 19247 3.581024 TTTCGTCGCCTACACATAGTT 57.419 42.857 0.00 0.00 0.00 2.24
9020 19248 3.581024 TTTTCGTCGCCTACACATAGT 57.419 42.857 0.00 0.00 0.00 2.12
9021 19249 4.171005 TCTTTTTCGTCGCCTACACATAG 58.829 43.478 0.00 0.00 0.00 2.23
9022 19250 4.177165 TCTTTTTCGTCGCCTACACATA 57.823 40.909 0.00 0.00 0.00 2.29
9023 19251 3.034721 TCTTTTTCGTCGCCTACACAT 57.965 42.857 0.00 0.00 0.00 3.21
9025 19253 3.865224 TTTCTTTTTCGTCGCCTACAC 57.135 42.857 0.00 0.00 0.00 2.90
9026 19254 6.365050 GTTATTTTCTTTTTCGTCGCCTACA 58.635 36.000 0.00 0.00 0.00 2.74
9027 19255 5.791974 GGTTATTTTCTTTTTCGTCGCCTAC 59.208 40.000 0.00 0.00 0.00 3.18
9028 19256 5.106594 GGGTTATTTTCTTTTTCGTCGCCTA 60.107 40.000 0.00 0.00 0.00 3.93
9029 19257 4.320714 GGGTTATTTTCTTTTTCGTCGCCT 60.321 41.667 0.00 0.00 0.00 5.52
9030 19258 3.916172 GGGTTATTTTCTTTTTCGTCGCC 59.084 43.478 0.00 0.00 0.00 5.54
9031 19259 4.380678 GTGGGTTATTTTCTTTTTCGTCGC 59.619 41.667 0.00 0.00 0.00 5.19
9032 19260 4.609708 CGTGGGTTATTTTCTTTTTCGTCG 59.390 41.667 0.00 0.00 0.00 5.12
9033 19261 4.913345 CCGTGGGTTATTTTCTTTTTCGTC 59.087 41.667 0.00 0.00 0.00 4.20
9034 19262 4.793678 GCCGTGGGTTATTTTCTTTTTCGT 60.794 41.667 0.00 0.00 0.00 3.85
9035 19263 3.671459 GCCGTGGGTTATTTTCTTTTTCG 59.329 43.478 0.00 0.00 0.00 3.46
9036 19264 3.671459 CGCCGTGGGTTATTTTCTTTTTC 59.329 43.478 0.00 0.00 0.00 2.29
9039 19267 2.227149 GTCGCCGTGGGTTATTTTCTTT 59.773 45.455 0.00 0.00 0.00 2.52
9042 19270 0.448990 GGTCGCCGTGGGTTATTTTC 59.551 55.000 0.00 0.00 0.00 2.29
9043 19271 0.961857 GGGTCGCCGTGGGTTATTTT 60.962 55.000 0.00 0.00 0.00 1.82
9045 19273 2.269883 GGGTCGCCGTGGGTTATT 59.730 61.111 0.00 0.00 0.00 1.40
9046 19274 4.151582 CGGGTCGCCGTGGGTTAT 62.152 66.667 0.00 0.00 0.00 1.89
9068 19296 3.936902 TTGTTATAGTTTGCCGATCGC 57.063 42.857 10.32 6.08 38.31 4.58
9069 19297 5.432157 GTCATTGTTATAGTTTGCCGATCG 58.568 41.667 8.51 8.51 0.00 3.69
9070 19298 5.295787 TGGTCATTGTTATAGTTTGCCGATC 59.704 40.000 0.00 0.00 0.00 3.69
9071 19299 5.189928 TGGTCATTGTTATAGTTTGCCGAT 58.810 37.500 0.00 0.00 0.00 4.18
9073 19301 4.955925 TGGTCATTGTTATAGTTTGCCG 57.044 40.909 0.00 0.00 0.00 5.69
9074 19302 8.292448 CAGATATGGTCATTGTTATAGTTTGCC 58.708 37.037 0.00 0.00 0.00 4.52
9075 19303 7.805071 GCAGATATGGTCATTGTTATAGTTTGC 59.195 37.037 0.00 0.00 0.00 3.68
9076 19304 8.839343 TGCAGATATGGTCATTGTTATAGTTTG 58.161 33.333 0.00 0.00 0.00 2.93
9077 19305 8.840321 GTGCAGATATGGTCATTGTTATAGTTT 58.160 33.333 0.00 0.00 0.00 2.66
9078 19306 7.445402 GGTGCAGATATGGTCATTGTTATAGTT 59.555 37.037 0.00 0.00 0.00 2.24
9079 19307 6.936900 GGTGCAGATATGGTCATTGTTATAGT 59.063 38.462 0.00 0.00 0.00 2.12
9081 19309 6.836242 TGGTGCAGATATGGTCATTGTTATA 58.164 36.000 0.00 0.00 0.00 0.98
9082 19310 5.693961 TGGTGCAGATATGGTCATTGTTAT 58.306 37.500 0.00 0.00 0.00 1.89
9083 19311 5.109500 TGGTGCAGATATGGTCATTGTTA 57.891 39.130 0.00 0.00 0.00 2.41
9084 19312 3.966979 TGGTGCAGATATGGTCATTGTT 58.033 40.909 0.00 0.00 0.00 2.83
9085 19313 3.650281 TGGTGCAGATATGGTCATTGT 57.350 42.857 0.00 0.00 0.00 2.71
9086 19314 3.067180 GGTTGGTGCAGATATGGTCATTG 59.933 47.826 0.00 0.00 0.00 2.82
9087 19315 3.290710 GGTTGGTGCAGATATGGTCATT 58.709 45.455 0.00 0.00 0.00 2.57
9090 19318 2.418368 TGGTTGGTGCAGATATGGTC 57.582 50.000 0.00 0.00 0.00 4.02
9091 19319 4.104579 TGATATGGTTGGTGCAGATATGGT 59.895 41.667 0.00 0.00 0.00 3.55
9092 19320 4.654915 TGATATGGTTGGTGCAGATATGG 58.345 43.478 0.00 0.00 0.00 2.74
9093 19321 5.941647 TCATGATATGGTTGGTGCAGATATG 59.058 40.000 0.00 0.00 0.00 1.78
9094 19322 5.942236 GTCATGATATGGTTGGTGCAGATAT 59.058 40.000 0.00 0.00 0.00 1.63
9095 19323 5.163216 TGTCATGATATGGTTGGTGCAGATA 60.163 40.000 0.00 0.00 0.00 1.98
9096 19324 4.139786 GTCATGATATGGTTGGTGCAGAT 58.860 43.478 0.00 0.00 0.00 2.90
9099 19327 3.016031 GTGTCATGATATGGTTGGTGCA 58.984 45.455 0.00 0.00 0.00 4.57
9100 19328 2.358898 GGTGTCATGATATGGTTGGTGC 59.641 50.000 0.00 0.00 0.00 5.01
9102 19330 4.524802 ATGGTGTCATGATATGGTTGGT 57.475 40.909 0.00 0.00 31.34 3.67
9115 19343 1.372872 CGTCGTCTGCATGGTGTCA 60.373 57.895 0.00 0.00 0.00 3.58
9118 19346 0.179127 ATCTCGTCGTCTGCATGGTG 60.179 55.000 0.00 0.00 0.00 4.17
9119 19347 0.532573 AATCTCGTCGTCTGCATGGT 59.467 50.000 0.00 0.00 0.00 3.55
9120 19348 1.202348 AGAATCTCGTCGTCTGCATGG 60.202 52.381 0.00 0.00 0.00 3.66
9121 19349 2.200792 AGAATCTCGTCGTCTGCATG 57.799 50.000 0.00 0.00 0.00 4.06
9122 19350 2.164422 TGAAGAATCTCGTCGTCTGCAT 59.836 45.455 0.00 0.00 0.00 3.96
9123 19351 1.539827 TGAAGAATCTCGTCGTCTGCA 59.460 47.619 0.00 0.00 0.00 4.41
9124 19352 2.264109 TGAAGAATCTCGTCGTCTGC 57.736 50.000 0.00 0.00 0.00 4.26
9125 19353 3.565516 TGTTGAAGAATCTCGTCGTCTG 58.434 45.455 0.00 0.00 0.00 3.51
9127 19355 3.566523 ACTGTTGAAGAATCTCGTCGTC 58.433 45.455 0.00 0.00 0.00 4.20
9128 19356 3.644884 ACTGTTGAAGAATCTCGTCGT 57.355 42.857 0.00 0.00 0.00 4.34
9129 19357 4.029198 CGTTACTGTTGAAGAATCTCGTCG 59.971 45.833 0.00 0.00 0.00 5.12
9130 19358 4.201504 GCGTTACTGTTGAAGAATCTCGTC 60.202 45.833 0.00 0.00 0.00 4.20
9131 19359 3.673809 GCGTTACTGTTGAAGAATCTCGT 59.326 43.478 0.00 0.00 0.00 4.18
9132 19360 3.060895 GGCGTTACTGTTGAAGAATCTCG 59.939 47.826 0.00 0.00 0.00 4.04
9134 19362 4.273148 AGGCGTTACTGTTGAAGAATCT 57.727 40.909 0.00 0.00 0.00 2.40
9135 19363 6.304882 GTTAAGGCGTTACTGTTGAAGAATC 58.695 40.000 0.00 0.00 0.00 2.52
9137 19365 4.209703 CGTTAAGGCGTTACTGTTGAAGAA 59.790 41.667 0.00 0.00 0.00 2.52
9138 19366 3.737266 CGTTAAGGCGTTACTGTTGAAGA 59.263 43.478 0.00 0.00 0.00 2.87
9139 19367 3.737266 TCGTTAAGGCGTTACTGTTGAAG 59.263 43.478 0.00 0.00 0.00 3.02
9140 19368 3.715495 TCGTTAAGGCGTTACTGTTGAA 58.285 40.909 0.00 0.00 0.00 2.69
9141 19369 3.367992 TCGTTAAGGCGTTACTGTTGA 57.632 42.857 0.00 0.00 0.00 3.18
9142 19370 3.120786 CCTTCGTTAAGGCGTTACTGTTG 60.121 47.826 0.00 0.00 45.78 3.33
9143 19371 3.062042 CCTTCGTTAAGGCGTTACTGTT 58.938 45.455 0.00 0.00 45.78 3.16
9155 19383 0.963962 AGTGTCGCTCCCTTCGTTAA 59.036 50.000 0.00 0.00 0.00 2.01
9156 19384 0.524862 GAGTGTCGCTCCCTTCGTTA 59.475 55.000 1.65 0.00 38.27 3.18
9157 19385 1.289380 GAGTGTCGCTCCCTTCGTT 59.711 57.895 1.65 0.00 38.27 3.85
9158 19386 1.461091 TTGAGTGTCGCTCCCTTCGT 61.461 55.000 10.87 0.00 43.48 3.85
9159 19387 0.734253 CTTGAGTGTCGCTCCCTTCG 60.734 60.000 10.87 0.00 43.48 3.79
9160 19388 1.016653 GCTTGAGTGTCGCTCCCTTC 61.017 60.000 10.87 0.00 43.48 3.46
9161 19389 1.004440 GCTTGAGTGTCGCTCCCTT 60.004 57.895 10.87 0.00 43.48 3.95
9162 19390 2.659610 GCTTGAGTGTCGCTCCCT 59.340 61.111 10.87 0.00 43.48 4.20
9164 19392 2.049063 ACGCTTGAGTGTCGCTCC 60.049 61.111 10.87 0.00 43.48 4.70
9165 19393 3.453465 GACGCTTGAGTGTCGCTC 58.547 61.111 6.45 6.45 44.27 5.03
9182 19410 1.811266 CTTGGATCTGGTGACGGCG 60.811 63.158 4.80 4.80 36.33 6.46
9183 19411 2.109126 GCTTGGATCTGGTGACGGC 61.109 63.158 0.00 0.00 36.33 5.68
9184 19412 1.021390 GTGCTTGGATCTGGTGACGG 61.021 60.000 0.00 0.00 38.41 4.79
9185 19413 1.021390 GGTGCTTGGATCTGGTGACG 61.021 60.000 0.00 0.00 0.00 4.35
9186 19414 0.678048 GGGTGCTTGGATCTGGTGAC 60.678 60.000 0.00 0.00 0.00 3.67
9188 19416 0.033796 ATGGGTGCTTGGATCTGGTG 60.034 55.000 0.00 0.00 0.00 4.17
9189 19417 0.033796 CATGGGTGCTTGGATCTGGT 60.034 55.000 0.00 0.00 0.00 4.00
9190 19418 0.754217 CCATGGGTGCTTGGATCTGG 60.754 60.000 2.85 0.00 34.81 3.86
9191 19419 1.389609 GCCATGGGTGCTTGGATCTG 61.390 60.000 15.13 0.00 34.81 2.90
9192 19420 1.076485 GCCATGGGTGCTTGGATCT 60.076 57.895 15.13 0.00 34.81 2.75
9193 19421 1.380246 TGCCATGGGTGCTTGGATC 60.380 57.895 15.13 0.00 34.81 3.36
9194 19422 1.380785 CTGCCATGGGTGCTTGGAT 60.381 57.895 15.13 0.00 34.81 3.41
9195 19423 2.036098 CTGCCATGGGTGCTTGGA 59.964 61.111 15.13 0.00 34.81 3.53
9199 19427 1.142465 CTAGATTCTGCCATGGGTGCT 59.858 52.381 15.13 0.40 0.00 4.40
9200 19428 1.602311 CTAGATTCTGCCATGGGTGC 58.398 55.000 15.13 0.00 0.00 5.01
9201 19429 1.492176 ACCTAGATTCTGCCATGGGTG 59.508 52.381 15.13 0.00 0.00 4.61
9202 19430 1.898863 ACCTAGATTCTGCCATGGGT 58.101 50.000 15.13 0.00 0.00 4.51
9203 19431 3.303351 AAACCTAGATTCTGCCATGGG 57.697 47.619 15.13 0.00 0.00 4.00
9204 19432 4.096984 GTGAAAACCTAGATTCTGCCATGG 59.903 45.833 7.63 7.63 0.00 3.66
9205 19433 4.096984 GGTGAAAACCTAGATTCTGCCATG 59.903 45.833 0.00 0.00 0.00 3.66
9206 19434 4.273318 GGTGAAAACCTAGATTCTGCCAT 58.727 43.478 0.00 0.00 0.00 4.40
9207 19435 3.561313 GGGTGAAAACCTAGATTCTGCCA 60.561 47.826 0.00 0.00 0.00 4.92
9208 19436 3.017442 GGGTGAAAACCTAGATTCTGCC 58.983 50.000 0.00 1.00 0.00 4.85
9209 19437 3.691609 CAGGGTGAAAACCTAGATTCTGC 59.308 47.826 0.00 0.00 36.32 4.26
9210 19438 5.165961 TCAGGGTGAAAACCTAGATTCTG 57.834 43.478 0.00 0.00 36.32 3.02
9212 19440 5.805728 TCTTCAGGGTGAAAACCTAGATTC 58.194 41.667 0.00 0.00 35.73 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.