Multiple sequence alignment - TraesCS6D01G394000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G394000 chr6D 100.000 4173 0 0 1 4173 467779212 467783384 0.000000e+00 7707.0
1 TraesCS6D01G394000 chr5A 86.351 1077 72 34 1450 2470 482376232 482375175 0.000000e+00 1105.0
2 TraesCS6D01G394000 chr5A 85.662 823 72 24 3007 3787 482374388 482373570 0.000000e+00 824.0
3 TraesCS6D01G394000 chr5A 94.872 468 16 3 2259 2725 482389886 482389426 0.000000e+00 725.0
4 TraesCS6D01G394000 chr5A 75.877 1397 147 92 1033 2348 482360347 482359060 4.750000e-149 538.0
5 TraesCS6D01G394000 chr5A 93.060 317 14 3 2620 2928 482375177 482374861 1.370000e-124 457.0
6 TraesCS6D01G394000 chr5A 85.680 412 33 7 3785 4173 482373351 482372943 1.080000e-110 411.0
7 TraesCS6D01G394000 chr5A 94.958 238 11 1 2017 2254 482390175 482389939 5.100000e-99 372.0
8 TraesCS6D01G394000 chr5A 88.172 93 8 3 2256 2348 482427578 482427489 1.590000e-19 108.0
9 TraesCS6D01G394000 chr5A 91.111 45 4 0 2454 2498 482389663 482389619 1.250000e-05 62.1
10 TraesCS6D01G394000 chr6A 85.242 908 71 31 1048 1948 613885576 613886427 0.000000e+00 876.0
11 TraesCS6D01G394000 chr6A 86.747 415 18 11 3781 4164 613888365 613888773 1.070000e-115 427.0
12 TraesCS6D01G394000 chr6A 78.723 564 67 20 1873 2417 613889032 613889561 1.120000e-85 327.0
13 TraesCS6D01G394000 chr6A 95.455 66 3 0 3722 3787 613888083 613888148 5.710000e-19 106.0
14 TraesCS6D01G394000 chr6B 85.767 808 52 23 908 1682 713007639 713008416 0.000000e+00 797.0
15 TraesCS6D01G394000 chr6B 85.096 416 41 12 1831 2242 713008551 713008949 5.020000e-109 405.0
16 TraesCS6D01G394000 chr6B 78.003 591 53 32 115 638 713006903 713007483 2.440000e-77 300.0
17 TraesCS6D01G394000 chr6B 93.966 116 7 0 1 116 712999284 712999399 4.290000e-40 176.0
18 TraesCS6D01G394000 chr6B 80.556 216 29 10 3931 4140 713474724 713474516 2.010000e-33 154.0
19 TraesCS6D01G394000 chr1D 91.228 114 5 2 3145 3253 254478034 254478147 2.600000e-32 150.0
20 TraesCS6D01G394000 chrUn 90.991 111 5 2 3145 3250 397677070 397677180 1.210000e-30 145.0
21 TraesCS6D01G394000 chrUn 90.351 114 6 2 3145 3253 462818728 462818615 1.210000e-30 145.0
22 TraesCS6D01G394000 chrUn 100.000 28 0 0 723 750 16893640 16893613 8.000000e-03 52.8
23 TraesCS6D01G394000 chr5D 90.351 114 6 2 3145 3253 6235204 6235091 1.210000e-30 145.0
24 TraesCS6D01G394000 chr4A 90.351 114 6 2 3145 3253 309288143 309288030 1.210000e-30 145.0
25 TraesCS6D01G394000 chr2D 90.351 114 6 2 3145 3253 648660267 648660154 1.210000e-30 145.0
26 TraesCS6D01G394000 chr2D 90.991 111 5 2 3145 3250 648661968 648662078 1.210000e-30 145.0
27 TraesCS6D01G394000 chr1A 90.351 114 6 2 3145 3253 554447250 554447137 1.210000e-30 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G394000 chr6D 467779212 467783384 4172 False 7707.000000 7707 100.000000 1 4173 1 chr6D.!!$F1 4172
1 TraesCS6D01G394000 chr5A 482372943 482376232 3289 True 699.250000 1105 87.688250 1450 4173 4 chr5A.!!$R3 2723
2 TraesCS6D01G394000 chr5A 482359060 482360347 1287 True 538.000000 538 75.877000 1033 2348 1 chr5A.!!$R1 1315
3 TraesCS6D01G394000 chr5A 482389426 482390175 749 True 386.366667 725 93.647000 2017 2725 3 chr5A.!!$R4 708
4 TraesCS6D01G394000 chr6A 613885576 613889561 3985 False 434.000000 876 86.541750 1048 4164 4 chr6A.!!$F1 3116
5 TraesCS6D01G394000 chr6B 713006903 713008949 2046 False 500.666667 797 82.955333 115 2242 3 chr6B.!!$F2 2127

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
591 660 0.106066 TTCCAATATGGGCCTGCCTG 60.106 55.0 4.53 0.0 38.32 4.85 F
883 985 0.179100 AGTCATCGATCAACCAGCCG 60.179 55.0 0.00 0.0 0.00 5.52 F
2152 5081 0.328926 TGCTGCTTCATCCATCCACA 59.671 50.0 0.00 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2079 4967 0.109913 TCATGATGCCTGATCCAGCC 59.890 55.0 0.0 0.0 0.00 4.85 R
2285 5277 0.629596 AGTCCCGTATCCAGTCTCCA 59.370 55.0 0.0 0.0 0.00 3.86 R
3790 7448 0.323999 TAGCCTTGCCAGAGGACGTA 60.324 55.0 0.0 0.0 39.25 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.868160 CCCCTTTAGGAGTGATAATTTTTCTAT 57.132 33.333 0.00 0.00 38.24 1.98
32 33 8.443953 AGGAGTGATAATTTTTCTATCAGCAC 57.556 34.615 0.00 0.00 36.65 4.40
33 34 8.049117 AGGAGTGATAATTTTTCTATCAGCACA 58.951 33.333 0.00 0.00 36.65 4.57
34 35 8.677300 GGAGTGATAATTTTTCTATCAGCACAA 58.323 33.333 0.00 0.00 36.65 3.33
39 40 9.674824 GATAATTTTTCTATCAGCACAATCTGG 57.325 33.333 0.00 0.00 34.91 3.86
40 41 7.707624 AATTTTTCTATCAGCACAATCTGGA 57.292 32.000 0.00 0.00 34.91 3.86
41 42 7.707624 ATTTTTCTATCAGCACAATCTGGAA 57.292 32.000 0.00 0.00 34.91 3.53
42 43 7.707624 TTTTTCTATCAGCACAATCTGGAAT 57.292 32.000 0.00 0.00 34.91 3.01
43 44 7.707624 TTTTCTATCAGCACAATCTGGAATT 57.292 32.000 0.00 0.00 34.91 2.17
44 45 6.932356 TTCTATCAGCACAATCTGGAATTC 57.068 37.500 0.00 0.00 34.91 2.17
45 46 5.993055 TCTATCAGCACAATCTGGAATTCA 58.007 37.500 7.93 0.00 34.91 2.57
46 47 4.978083 ATCAGCACAATCTGGAATTCAC 57.022 40.909 7.93 0.00 34.91 3.18
47 48 3.753815 TCAGCACAATCTGGAATTCACA 58.246 40.909 7.93 2.28 34.91 3.58
48 49 3.503363 TCAGCACAATCTGGAATTCACAC 59.497 43.478 7.93 0.00 34.91 3.82
49 50 3.504906 CAGCACAATCTGGAATTCACACT 59.495 43.478 7.93 0.00 0.00 3.55
50 51 4.022589 CAGCACAATCTGGAATTCACACTT 60.023 41.667 7.93 0.00 0.00 3.16
51 52 4.586001 AGCACAATCTGGAATTCACACTTT 59.414 37.500 7.93 0.00 0.00 2.66
52 53 4.919754 GCACAATCTGGAATTCACACTTTC 59.080 41.667 7.93 0.00 0.00 2.62
53 54 5.278660 GCACAATCTGGAATTCACACTTTCT 60.279 40.000 7.93 0.00 0.00 2.52
54 55 6.376978 CACAATCTGGAATTCACACTTTCTC 58.623 40.000 7.93 0.00 0.00 2.87
55 56 6.206243 CACAATCTGGAATTCACACTTTCTCT 59.794 38.462 7.93 0.00 0.00 3.10
56 57 6.429385 ACAATCTGGAATTCACACTTTCTCTC 59.571 38.462 7.93 0.00 0.00 3.20
57 58 5.551305 TCTGGAATTCACACTTTCTCTCA 57.449 39.130 7.93 0.00 0.00 3.27
58 59 5.928976 TCTGGAATTCACACTTTCTCTCAA 58.071 37.500 7.93 0.00 0.00 3.02
59 60 6.356556 TCTGGAATTCACACTTTCTCTCAAA 58.643 36.000 7.93 0.00 0.00 2.69
60 61 7.000472 TCTGGAATTCACACTTTCTCTCAAAT 59.000 34.615 7.93 0.00 0.00 2.32
61 62 8.156820 TCTGGAATTCACACTTTCTCTCAAATA 58.843 33.333 7.93 0.00 0.00 1.40
62 63 8.868522 TGGAATTCACACTTTCTCTCAAATAT 57.131 30.769 7.93 0.00 0.00 1.28
63 64 8.950210 TGGAATTCACACTTTCTCTCAAATATC 58.050 33.333 7.93 0.00 0.00 1.63
64 65 8.950210 GGAATTCACACTTTCTCTCAAATATCA 58.050 33.333 7.93 0.00 0.00 2.15
86 87 7.351414 TCAATATTCTGACAGTTTCAACTCG 57.649 36.000 1.59 0.00 37.08 4.18
87 88 5.786401 ATATTCTGACAGTTTCAACTCGC 57.214 39.130 1.59 0.00 37.08 5.03
88 89 1.865865 TCTGACAGTTTCAACTCGCC 58.134 50.000 1.59 0.00 37.08 5.54
89 90 1.138069 TCTGACAGTTTCAACTCGCCA 59.862 47.619 1.59 0.00 37.08 5.69
90 91 2.146342 CTGACAGTTTCAACTCGCCAT 58.854 47.619 0.00 0.00 37.08 4.40
91 92 3.006430 TCTGACAGTTTCAACTCGCCATA 59.994 43.478 1.59 0.00 37.08 2.74
92 93 3.935203 CTGACAGTTTCAACTCGCCATAT 59.065 43.478 0.00 0.00 37.08 1.78
93 94 5.079689 TGACAGTTTCAACTCGCCATATA 57.920 39.130 0.00 0.00 37.08 0.86
94 95 5.670485 TGACAGTTTCAACTCGCCATATAT 58.330 37.500 0.00 0.00 37.08 0.86
95 96 5.523552 TGACAGTTTCAACTCGCCATATATG 59.476 40.000 5.68 5.68 37.08 1.78
96 97 4.273480 ACAGTTTCAACTCGCCATATATGC 59.727 41.667 7.24 2.52 37.08 3.14
97 98 3.815401 AGTTTCAACTCGCCATATATGCC 59.185 43.478 7.24 0.00 32.86 4.40
98 99 2.472695 TCAACTCGCCATATATGCCC 57.527 50.000 7.24 0.00 0.00 5.36
99 100 1.696884 TCAACTCGCCATATATGCCCA 59.303 47.619 7.24 0.00 0.00 5.36
100 101 2.305635 TCAACTCGCCATATATGCCCAT 59.694 45.455 7.24 0.00 0.00 4.00
101 102 3.084039 CAACTCGCCATATATGCCCATT 58.916 45.455 7.24 0.00 0.00 3.16
102 103 2.715046 ACTCGCCATATATGCCCATTG 58.285 47.619 7.24 0.00 0.00 2.82
103 104 2.305635 ACTCGCCATATATGCCCATTGA 59.694 45.455 7.24 0.00 0.00 2.57
104 105 2.679837 CTCGCCATATATGCCCATTGAC 59.320 50.000 7.24 0.00 0.00 3.18
105 106 1.398041 CGCCATATATGCCCATTGACG 59.602 52.381 7.24 0.00 0.00 4.35
106 107 1.745087 GCCATATATGCCCATTGACGG 59.255 52.381 7.24 0.00 0.00 4.79
107 108 2.617788 GCCATATATGCCCATTGACGGA 60.618 50.000 7.24 0.00 0.00 4.69
108 109 3.273434 CCATATATGCCCATTGACGGAG 58.727 50.000 7.24 0.00 0.00 4.63
109 110 2.472695 TATATGCCCATTGACGGAGC 57.527 50.000 0.00 0.00 0.00 4.70
110 111 0.767375 ATATGCCCATTGACGGAGCT 59.233 50.000 0.00 0.00 0.00 4.09
111 112 1.419381 TATGCCCATTGACGGAGCTA 58.581 50.000 0.00 0.00 0.00 3.32
112 113 0.546122 ATGCCCATTGACGGAGCTAA 59.454 50.000 0.00 0.00 0.00 3.09
113 114 0.326595 TGCCCATTGACGGAGCTAAA 59.673 50.000 0.00 0.00 0.00 1.85
147 148 3.818773 TGCCTTTTACTTTGCTCTACACC 59.181 43.478 0.00 0.00 0.00 4.16
160 161 4.278170 TGCTCTACACCAGGAACAATTTTG 59.722 41.667 0.00 0.00 0.00 2.44
233 254 9.897744 ACACAGTGAACATTTTCTAATACATTG 57.102 29.630 7.81 0.00 32.36 2.82
324 346 9.309516 TGTAGAATATTTTCCGAGTACACATTC 57.690 33.333 0.00 0.00 31.84 2.67
329 351 9.787532 AATATTTTCCGAGTACACATTCATTTG 57.212 29.630 0.00 0.00 0.00 2.32
355 377 9.916397 GTGTGTATTCCTAATTTCTTGATAACG 57.084 33.333 0.00 0.00 0.00 3.18
356 378 9.878667 TGTGTATTCCTAATTTCTTGATAACGA 57.121 29.630 0.00 0.00 0.00 3.85
396 435 9.607988 CAGAATTTATAAACCCAAAATAACCCC 57.392 33.333 0.00 0.00 0.00 4.95
397 436 9.340223 AGAATTTATAAACCCAAAATAACCCCA 57.660 29.630 0.00 0.00 0.00 4.96
398 437 9.961264 GAATTTATAAACCCAAAATAACCCCAA 57.039 29.630 0.00 0.00 0.00 4.12
402 441 9.556772 TTATAAACCCAAAATAACCCCAACATA 57.443 29.630 0.00 0.00 0.00 2.29
413 452 2.585432 ACCCCAACATAGGCATAGGTTT 59.415 45.455 5.59 0.00 33.80 3.27
425 464 2.727916 GCATAGGTTTGCACGTTACTGC 60.728 50.000 0.00 0.00 42.31 4.40
427 466 1.724581 GGTTTGCACGTTACTGCGC 60.725 57.895 0.00 0.00 40.31 6.09
428 467 1.010574 GTTTGCACGTTACTGCGCA 60.011 52.632 10.98 10.98 40.31 6.09
429 468 0.991770 GTTTGCACGTTACTGCGCAG 60.992 55.000 34.89 34.89 40.31 5.18
527 595 5.296748 GGAAAACACTATTTGGCACATGTT 58.703 37.500 0.00 0.00 38.04 2.71
528 596 6.451393 GGAAAACACTATTTGGCACATGTTA 58.549 36.000 0.00 0.00 35.80 2.41
529 597 6.586082 GGAAAACACTATTTGGCACATGTTAG 59.414 38.462 0.00 0.00 35.80 2.34
531 599 4.335416 ACACTATTTGGCACATGTTAGCT 58.665 39.130 7.96 0.00 39.30 3.32
532 600 4.156556 ACACTATTTGGCACATGTTAGCTG 59.843 41.667 7.96 5.14 39.30 4.24
533 601 4.156556 CACTATTTGGCACATGTTAGCTGT 59.843 41.667 7.96 0.00 39.30 4.40
534 602 5.353956 CACTATTTGGCACATGTTAGCTGTA 59.646 40.000 7.96 0.00 39.30 2.74
535 603 4.970662 ATTTGGCACATGTTAGCTGTAG 57.029 40.909 7.96 0.00 39.30 2.74
536 604 3.694043 TTGGCACATGTTAGCTGTAGA 57.306 42.857 7.96 0.00 39.30 2.59
537 605 3.912496 TGGCACATGTTAGCTGTAGAT 57.088 42.857 7.96 0.00 0.00 1.98
538 606 5.351948 TTGGCACATGTTAGCTGTAGATA 57.648 39.130 7.96 0.00 39.30 1.98
539 607 4.948847 TGGCACATGTTAGCTGTAGATAG 58.051 43.478 7.96 0.00 0.00 2.08
540 608 3.743396 GGCACATGTTAGCTGTAGATAGC 59.257 47.826 7.96 0.00 44.01 2.97
576 645 4.368003 CCCCCTACGCTACTTCCA 57.632 61.111 0.00 0.00 0.00 3.53
590 659 0.186873 CTTCCAATATGGGCCTGCCT 59.813 55.000 4.53 0.00 38.32 4.75
591 660 0.106066 TTCCAATATGGGCCTGCCTG 60.106 55.000 4.53 0.00 38.32 4.85
594 663 1.456331 AATATGGGCCTGCCTGTGC 60.456 57.895 4.53 0.00 36.10 4.57
629 731 5.650266 TCAGCAGTTTTGGACAGTTTTTCTA 59.350 36.000 0.00 0.00 0.00 2.10
636 738 9.719355 AGTTTTGGACAGTTTTTCTATTGTTTT 57.281 25.926 0.00 0.00 0.00 2.43
643 745 7.102993 ACAGTTTTTCTATTGTTTTTGCAGGT 58.897 30.769 0.00 0.00 0.00 4.00
646 748 7.492344 AGTTTTTCTATTGTTTTTGCAGGTCAG 59.508 33.333 0.00 0.00 0.00 3.51
647 749 6.463995 TTTCTATTGTTTTTGCAGGTCAGT 57.536 33.333 0.00 0.00 0.00 3.41
659 761 2.504367 CAGGTCAGTTTTCATTCGGGT 58.496 47.619 0.00 0.00 0.00 5.28
669 771 7.173390 TCAGTTTTCATTCGGGTTTTTGTTTTT 59.827 29.630 0.00 0.00 0.00 1.94
805 907 9.892130 TTATAAAAAGGGTGAACATTTTTGTGT 57.108 25.926 14.95 4.73 36.91 3.72
806 908 6.493449 AAAAAGGGTGAACATTTTTGTGTG 57.507 33.333 4.68 0.00 35.43 3.82
807 909 5.413309 AAAGGGTGAACATTTTTGTGTGA 57.587 34.783 0.00 0.00 31.49 3.58
808 910 5.612725 AAGGGTGAACATTTTTGTGTGAT 57.387 34.783 0.00 0.00 31.49 3.06
809 911 5.200368 AGGGTGAACATTTTTGTGTGATC 57.800 39.130 0.00 0.00 31.49 2.92
810 912 4.039124 AGGGTGAACATTTTTGTGTGATCC 59.961 41.667 0.00 0.00 31.49 3.36
811 913 4.039124 GGGTGAACATTTTTGTGTGATCCT 59.961 41.667 0.00 0.00 31.49 3.24
812 914 4.984161 GGTGAACATTTTTGTGTGATCCTG 59.016 41.667 0.00 0.00 31.49 3.86
813 915 5.221224 GGTGAACATTTTTGTGTGATCCTGA 60.221 40.000 0.00 0.00 31.49 3.86
814 916 6.272318 GTGAACATTTTTGTGTGATCCTGAA 58.728 36.000 0.00 0.00 31.49 3.02
815 917 6.925165 GTGAACATTTTTGTGTGATCCTGAAT 59.075 34.615 0.00 0.00 31.49 2.57
816 918 7.115378 GTGAACATTTTTGTGTGATCCTGAATC 59.885 37.037 0.00 0.00 31.49 2.52
817 919 6.653526 ACATTTTTGTGTGATCCTGAATCA 57.346 33.333 0.00 0.00 42.21 2.57
818 920 7.235935 ACATTTTTGTGTGATCCTGAATCAT 57.764 32.000 0.00 0.00 45.94 2.45
819 921 7.673180 ACATTTTTGTGTGATCCTGAATCATT 58.327 30.769 0.00 0.00 45.94 2.57
820 922 8.152246 ACATTTTTGTGTGATCCTGAATCATTT 58.848 29.630 0.00 0.00 45.94 2.32
821 923 8.995220 CATTTTTGTGTGATCCTGAATCATTTT 58.005 29.630 0.00 0.00 45.94 1.82
822 924 8.592105 TTTTTGTGTGATCCTGAATCATTTTC 57.408 30.769 0.00 0.00 45.94 2.29
823 925 6.897706 TTGTGTGATCCTGAATCATTTTCA 57.102 33.333 0.00 0.00 45.94 2.69
824 926 6.897706 TGTGTGATCCTGAATCATTTTCAA 57.102 33.333 0.00 0.00 45.94 2.69
825 927 7.287512 TGTGTGATCCTGAATCATTTTCAAA 57.712 32.000 0.00 0.00 45.94 2.69
826 928 7.147312 TGTGTGATCCTGAATCATTTTCAAAC 58.853 34.615 0.00 4.01 45.94 2.93
827 929 7.014518 TGTGTGATCCTGAATCATTTTCAAACT 59.985 33.333 9.58 0.00 45.94 2.66
828 930 7.540055 GTGTGATCCTGAATCATTTTCAAACTC 59.460 37.037 0.00 0.00 45.94 3.01
829 931 7.231115 TGTGATCCTGAATCATTTTCAAACTCA 59.769 33.333 0.00 0.00 45.94 3.41
830 932 8.248945 GTGATCCTGAATCATTTTCAAACTCAT 58.751 33.333 0.00 0.00 45.94 2.90
831 933 8.248253 TGATCCTGAATCATTTTCAAACTCATG 58.752 33.333 0.00 0.00 39.52 3.07
832 934 7.764141 TCCTGAATCATTTTCAAACTCATGA 57.236 32.000 0.00 0.00 0.00 3.07
833 935 8.180706 TCCTGAATCATTTTCAAACTCATGAA 57.819 30.769 0.00 0.00 37.53 2.57
834 936 8.084073 TCCTGAATCATTTTCAAACTCATGAAC 58.916 33.333 0.00 0.00 38.95 3.18
835 937 8.086522 CCTGAATCATTTTCAAACTCATGAACT 58.913 33.333 0.00 0.00 38.95 3.01
836 938 9.472361 CTGAATCATTTTCAAACTCATGAACTT 57.528 29.630 0.00 0.00 38.95 2.66
837 939 9.820725 TGAATCATTTTCAAACTCATGAACTTT 57.179 25.926 0.00 0.00 38.95 2.66
839 941 9.603921 AATCATTTTCAAACTCATGAACTTTGT 57.396 25.926 18.46 2.86 38.95 2.83
840 942 8.410030 TCATTTTCAAACTCATGAACTTTGTG 57.590 30.769 18.46 12.59 38.95 3.33
841 943 8.249638 TCATTTTCAAACTCATGAACTTTGTGA 58.750 29.630 18.46 14.00 38.95 3.58
842 944 8.871862 CATTTTCAAACTCATGAACTTTGTGAA 58.128 29.630 18.46 15.37 38.95 3.18
843 945 8.824159 TTTTCAAACTCATGAACTTTGTGAAA 57.176 26.923 18.46 16.96 38.95 2.69
844 946 9.434420 TTTTCAAACTCATGAACTTTGTGAAAT 57.566 25.926 18.46 0.00 38.95 2.17
845 947 9.434420 TTTCAAACTCATGAACTTTGTGAAATT 57.566 25.926 18.46 0.00 38.95 1.82
846 948 9.434420 TTCAAACTCATGAACTTTGTGAAATTT 57.566 25.926 18.46 0.00 34.50 1.82
847 949 9.086336 TCAAACTCATGAACTTTGTGAAATTTC 57.914 29.630 18.46 11.41 32.53 2.17
848 950 7.684062 AACTCATGAACTTTGTGAAATTTCG 57.316 32.000 13.34 1.45 34.04 3.46
849 951 5.687285 ACTCATGAACTTTGTGAAATTTCGC 59.313 36.000 22.10 22.10 34.04 4.70
850 952 5.586339 TCATGAACTTTGTGAAATTTCGCA 58.414 33.333 26.44 26.44 45.09 5.10
860 962 6.414408 TGTGAAATTTCGCAAACATGTTTT 57.586 29.167 27.64 4.33 43.95 2.43
861 963 6.835914 TGTGAAATTTCGCAAACATGTTTTT 58.164 28.000 27.64 11.06 43.95 1.94
862 964 7.963981 TGTGAAATTTCGCAAACATGTTTTTA 58.036 26.923 27.64 6.97 43.95 1.52
863 965 8.443160 TGTGAAATTTCGCAAACATGTTTTTAA 58.557 25.926 27.64 12.32 43.95 1.52
864 966 9.267096 GTGAAATTTCGCAAACATGTTTTTAAA 57.733 25.926 21.10 19.10 37.62 1.52
865 967 9.483062 TGAAATTTCGCAAACATGTTTTTAAAG 57.517 25.926 21.10 10.74 0.00 1.85
866 968 9.484326 GAAATTTCGCAAACATGTTTTTAAAGT 57.516 25.926 21.10 16.12 0.00 2.66
867 969 9.484326 AAATTTCGCAAACATGTTTTTAAAGTC 57.516 25.926 21.10 5.74 0.00 3.01
868 970 7.582435 TTTCGCAAACATGTTTTTAAAGTCA 57.418 28.000 21.10 0.00 0.00 3.41
869 971 7.763172 TTCGCAAACATGTTTTTAAAGTCAT 57.237 28.000 21.10 0.00 0.00 3.06
870 972 7.388290 TCGCAAACATGTTTTTAAAGTCATC 57.612 32.000 21.10 0.00 0.00 2.92
871 973 6.141527 TCGCAAACATGTTTTTAAAGTCATCG 59.858 34.615 21.10 6.78 0.00 3.84
872 974 6.141527 CGCAAACATGTTTTTAAAGTCATCGA 59.858 34.615 21.10 0.00 0.00 3.59
873 975 7.148983 CGCAAACATGTTTTTAAAGTCATCGAT 60.149 33.333 21.10 0.00 0.00 3.59
874 976 8.155923 GCAAACATGTTTTTAAAGTCATCGATC 58.844 33.333 21.10 0.00 0.00 3.69
875 977 9.179552 CAAACATGTTTTTAAAGTCATCGATCA 57.820 29.630 21.10 0.00 0.00 2.92
876 978 9.743057 AAACATGTTTTTAAAGTCATCGATCAA 57.257 25.926 18.13 0.00 0.00 2.57
877 979 8.728088 ACATGTTTTTAAAGTCATCGATCAAC 57.272 30.769 0.00 0.00 0.00 3.18
878 980 7.807907 ACATGTTTTTAAAGTCATCGATCAACC 59.192 33.333 0.00 0.00 0.00 3.77
879 981 7.265647 TGTTTTTAAAGTCATCGATCAACCA 57.734 32.000 0.00 0.00 0.00 3.67
880 982 7.359595 TGTTTTTAAAGTCATCGATCAACCAG 58.640 34.615 0.00 0.00 0.00 4.00
881 983 5.545658 TTTAAAGTCATCGATCAACCAGC 57.454 39.130 0.00 0.00 0.00 4.85
882 984 2.029838 AAGTCATCGATCAACCAGCC 57.970 50.000 0.00 0.00 0.00 4.85
883 985 0.179100 AGTCATCGATCAACCAGCCG 60.179 55.000 0.00 0.00 0.00 5.52
884 986 1.143838 TCATCGATCAACCAGCCGG 59.856 57.895 0.00 0.00 38.77 6.13
885 987 2.203070 ATCGATCAACCAGCCGGC 60.203 61.111 21.89 21.89 34.57 6.13
886 988 3.757248 ATCGATCAACCAGCCGGCC 62.757 63.158 26.15 5.07 34.57 6.13
899 1001 4.776322 CGGCCGGCCAATCAGTGA 62.776 66.667 42.78 0.00 35.37 3.41
900 1002 2.825836 GGCCGGCCAATCAGTGAG 60.826 66.667 40.73 0.00 35.81 3.51
901 1003 3.512516 GCCGGCCAATCAGTGAGC 61.513 66.667 18.11 0.00 0.00 4.26
902 1004 3.197790 CCGGCCAATCAGTGAGCG 61.198 66.667 2.24 0.00 0.00 5.03
903 1005 2.125552 CGGCCAATCAGTGAGCGA 60.126 61.111 2.24 0.00 0.00 4.93
904 1006 1.741401 CGGCCAATCAGTGAGCGAA 60.741 57.895 2.24 0.00 0.00 4.70
905 1007 1.796796 GGCCAATCAGTGAGCGAAC 59.203 57.895 0.00 0.00 0.00 3.95
906 1008 1.648467 GGCCAATCAGTGAGCGAACC 61.648 60.000 0.00 0.00 0.00 3.62
945 1047 4.250699 GGCTCCCTATGGCCCATA 57.749 61.111 2.87 2.87 42.30 2.74
946 1048 2.715295 GGCTCCCTATGGCCCATAT 58.285 57.895 3.37 0.00 42.30 1.78
1011 1113 1.142748 CCTGATGAGAGCCGACACC 59.857 63.158 0.00 0.00 0.00 4.16
1012 1114 1.226802 CTGATGAGAGCCGACACCG 60.227 63.158 0.00 0.00 0.00 4.94
1013 1115 1.938657 CTGATGAGAGCCGACACCGT 61.939 60.000 0.00 0.00 0.00 4.83
1014 1116 1.517257 GATGAGAGCCGACACCGTG 60.517 63.158 0.00 0.00 0.00 4.94
1031 1133 1.595929 TGACACGCCCCGTTTCTTC 60.596 57.895 5.66 0.00 38.32 2.87
1117 1219 3.391382 CCACCCCGTCAGGTCTCC 61.391 72.222 0.00 0.00 38.39 3.71
1120 1222 2.360980 CCCCGTCAGGTCTCCTCT 59.639 66.667 0.00 0.00 35.12 3.69
1135 1237 1.292941 CCTCTCCTCTCCCTCTCCCA 61.293 65.000 0.00 0.00 0.00 4.37
1161 1263 1.483004 GAACCTCCTGCTAGAACCCTC 59.517 57.143 0.00 0.00 0.00 4.30
1248 1359 4.636435 CGTGGGTTCGCTGGGGTT 62.636 66.667 0.00 0.00 0.00 4.11
1256 1367 1.990160 TTCGCTGGGGTTTGGAGTGT 61.990 55.000 0.00 0.00 0.00 3.55
1257 1368 2.260869 CGCTGGGGTTTGGAGTGTG 61.261 63.158 0.00 0.00 0.00 3.82
1267 1378 4.383661 GGGTTTGGAGTGTGTTTGGAATTT 60.384 41.667 0.00 0.00 0.00 1.82
1274 1385 5.048713 GGAGTGTGTTTGGAATTTCAGTAGG 60.049 44.000 0.00 0.00 0.00 3.18
1281 1392 6.072728 TGTTTGGAATTTCAGTAGGTTCGATG 60.073 38.462 0.00 0.00 0.00 3.84
1319 1430 7.534239 GTGGTTTCAGCTTTAATTTAAGAGTCG 59.466 37.037 8.35 0.00 0.00 4.18
1320 1431 7.227910 TGGTTTCAGCTTTAATTTAAGAGTCGT 59.772 33.333 8.35 0.00 0.00 4.34
1347 1458 2.218953 TCCGTATGAACCAGATTCGC 57.781 50.000 0.00 0.00 40.56 4.70
1351 1467 1.523095 GTATGAACCAGATTCGCTCGC 59.477 52.381 0.00 0.00 40.56 5.03
1361 1477 0.601311 ATTCGCTCGCTTAGGCATCC 60.601 55.000 0.00 0.00 38.60 3.51
1402 1518 1.136029 GTCGTCTGACTGAGGTGTACG 60.136 57.143 6.21 0.00 42.08 3.67
1460 1579 4.221422 GCCGGCGAGACATGGCTA 62.221 66.667 12.58 0.00 44.16 3.93
1533 1673 1.500474 TCTGTCCCCTGATGGATGTC 58.500 55.000 0.00 0.00 36.63 3.06
1553 1709 2.499289 TCTCTCTGCCTTGATTCAGTCC 59.501 50.000 0.00 0.00 0.00 3.85
1558 1714 3.265221 TCTGCCTTGATTCAGTCCTTCAT 59.735 43.478 0.00 0.00 0.00 2.57
1627 1797 4.390909 GTGTGTTATTCGGTTCAGGTAAGG 59.609 45.833 0.00 0.00 0.00 2.69
1722 1898 0.958876 CCCGGGTGAGCTGTTTTACC 60.959 60.000 14.18 0.00 0.00 2.85
1726 1902 2.936498 CGGGTGAGCTGTTTTACCATAG 59.064 50.000 0.00 0.00 34.89 2.23
1734 1910 5.500234 AGCTGTTTTACCATAGATTGCTGA 58.500 37.500 0.00 0.00 0.00 4.26
1758 1945 4.214310 TGAATATGGGCGATGGTCAATTT 58.786 39.130 0.00 0.00 0.00 1.82
1770 1957 4.329462 TGGTCAATTTGGGCTGTTTTAC 57.671 40.909 0.00 0.00 0.00 2.01
1778 1965 3.500448 TGGGCTGTTTTACTGTGATGA 57.500 42.857 0.00 0.00 0.00 2.92
1787 1977 7.118390 GCTGTTTTACTGTGATGACTTGATAGT 59.882 37.037 0.00 0.00 37.31 2.12
1790 1980 6.968131 TTACTGTGATGACTTGATAGTTGC 57.032 37.500 0.00 0.00 33.84 4.17
1909 2118 0.535335 GGCGTCCCAACAGAGTATGA 59.465 55.000 0.00 0.00 0.00 2.15
1922 2131 4.766373 ACAGAGTATGATCGATGCTCATCT 59.234 41.667 0.54 1.24 44.20 2.90
1926 4807 6.153170 AGAGTATGATCGATGCTCATCTCATT 59.847 38.462 0.54 4.15 44.20 2.57
1933 4814 4.034858 TCGATGCTCATCTCATTGCTTTTC 59.965 41.667 8.09 0.00 35.72 2.29
1936 4817 5.306532 TGCTCATCTCATTGCTTTTCTTC 57.693 39.130 0.00 0.00 0.00 2.87
1939 4820 6.028987 GCTCATCTCATTGCTTTTCTTCTTC 58.971 40.000 0.00 0.00 0.00 2.87
1947 4828 6.753279 TCATTGCTTTTCTTCTTCTTGTTGTG 59.247 34.615 0.00 0.00 0.00 3.33
1952 4833 4.981806 TTCTTCTTCTTGTTGTGGTTGG 57.018 40.909 0.00 0.00 0.00 3.77
1953 4834 4.229304 TCTTCTTCTTGTTGTGGTTGGA 57.771 40.909 0.00 0.00 0.00 3.53
1954 4835 4.594970 TCTTCTTCTTGTTGTGGTTGGAA 58.405 39.130 0.00 0.00 0.00 3.53
1955 4836 4.398044 TCTTCTTCTTGTTGTGGTTGGAAC 59.602 41.667 0.00 0.00 0.00 3.62
1983 4864 6.074034 GGAATTGGTGGTGTTAATTGTTTTCG 60.074 38.462 0.00 0.00 0.00 3.46
2038 4925 1.410882 GGTTCCTCCCTCTCTGATTCG 59.589 57.143 0.00 0.00 0.00 3.34
2100 4988 2.304092 GCTGGATCAGGCATCATGAAA 58.696 47.619 0.00 0.00 32.33 2.69
2108 4996 2.165030 CAGGCATCATGAAAGGTTCACC 59.835 50.000 0.00 0.00 43.48 4.02
2152 5081 0.328926 TGCTGCTTCATCCATCCACA 59.671 50.000 0.00 0.00 0.00 4.17
2195 5125 1.444553 GTCTTCGGAGTGCCAGTCG 60.445 63.158 0.00 0.00 0.00 4.18
2256 5200 5.406175 TGGTGTGTTTAATAGTTACGAGTGC 59.594 40.000 0.00 0.00 0.00 4.40
2286 5278 9.865321 ACAAATCATTTCTTTCTGAATATGGTG 57.135 29.630 0.00 0.00 34.24 4.17
2287 5279 9.309516 CAAATCATTTCTTTCTGAATATGGTGG 57.690 33.333 0.00 0.00 34.24 4.61
2444 5438 0.955428 GGGCATGTGTCAGCGAAGAA 60.955 55.000 0.00 0.00 0.00 2.52
2485 5479 6.780457 AGGCTATGCAATTGTTGAGTATTT 57.220 33.333 7.40 0.00 0.00 1.40
2486 5480 7.174107 AGGCTATGCAATTGTTGAGTATTTT 57.826 32.000 7.40 0.00 0.00 1.82
2499 5493 8.630054 TGTTGAGTATTTTGTTTATAGGCTGT 57.370 30.769 0.00 0.00 0.00 4.40
2500 5494 9.727859 TGTTGAGTATTTTGTTTATAGGCTGTA 57.272 29.630 0.00 0.00 0.00 2.74
2671 5665 2.599082 GCATGTACTCGCAGTCTTGTAC 59.401 50.000 0.00 0.00 36.69 2.90
2740 5734 9.539825 CATATCTCTGTTATGAGCACTAGTTTT 57.460 33.333 0.00 0.00 34.29 2.43
2742 5736 6.993079 TCTCTGTTATGAGCACTAGTTTTGA 58.007 36.000 0.00 0.00 34.29 2.69
2791 5785 6.829849 AGGATTTCATTTTTCTTTTCTGGCA 58.170 32.000 0.00 0.00 0.00 4.92
2802 5797 3.253188 TCTTTTCTGGCATTTCAGGTTCG 59.747 43.478 0.00 0.00 35.58 3.95
2819 5814 3.500680 GGTTCGTCTTTGCCTGTCAATAA 59.499 43.478 0.00 0.00 34.12 1.40
2830 5825 7.572523 TTGCCTGTCAATAAATAGAATCCTG 57.427 36.000 0.00 0.00 0.00 3.86
2880 5882 3.113824 AGAGGAAGCATGAGAAGGATGT 58.886 45.455 0.00 0.00 0.00 3.06
2918 5920 7.174946 AGTTGTGACGTTATGGAAGATTTTGAT 59.825 33.333 0.00 0.00 0.00 2.57
2929 5931 7.894376 TGGAAGATTTTGATTCAATCTTTGC 57.106 32.000 13.72 7.11 46.47 3.68
2930 5932 6.875195 TGGAAGATTTTGATTCAATCTTTGCC 59.125 34.615 13.72 12.04 46.47 4.52
2931 5933 7.101700 GGAAGATTTTGATTCAATCTTTGCCT 58.898 34.615 13.72 0.00 46.47 4.75
2932 5934 7.064253 GGAAGATTTTGATTCAATCTTTGCCTG 59.936 37.037 13.72 0.00 46.47 4.85
2935 5937 5.787953 TTTGATTCAATCTTTGCCTGTCA 57.212 34.783 0.00 0.00 0.00 3.58
2936 5938 5.787953 TTGATTCAATCTTTGCCTGTCAA 57.212 34.783 0.00 0.00 0.00 3.18
2937 5939 5.988310 TGATTCAATCTTTGCCTGTCAAT 57.012 34.783 0.00 0.00 34.12 2.57
2950 6193 4.283467 TGCCTGTCAATAAGTGTCTACTGT 59.717 41.667 0.00 0.00 37.19 3.55
2960 6203 5.730296 AAGTGTCTACTGTCTATGCTTGT 57.270 39.130 0.00 0.00 37.19 3.16
2966 6209 7.759886 GTGTCTACTGTCTATGCTTGTGAATAA 59.240 37.037 0.00 0.00 0.00 1.40
2975 6218 9.846248 GTCTATGCTTGTGAATAACTTGAAATT 57.154 29.630 0.00 0.00 0.00 1.82
2979 6222 6.642131 TGCTTGTGAATAACTTGAAATTCAGC 59.358 34.615 0.00 0.77 41.47 4.26
3072 6468 2.551270 TGAGTGCTGGGGAAGAGTAAT 58.449 47.619 0.00 0.00 0.00 1.89
3096 6492 2.943690 CTGCTGAGCTTTAGCACATGAT 59.056 45.455 19.07 0.00 45.52 2.45
3099 6495 4.943093 TGCTGAGCTTTAGCACATGATTTA 59.057 37.500 19.07 0.00 45.52 1.40
3129 6527 6.510879 ACTAACGAGTCATGTAAGTGATGA 57.489 37.500 0.00 0.00 0.00 2.92
3140 6538 1.645034 AAGTGATGAAGGACGCATCG 58.355 50.000 0.00 0.00 43.88 3.84
3262 6665 6.642131 TGATTTTGATTTTTGAAAGCTCCTCG 59.358 34.615 0.00 0.00 0.00 4.63
3273 6676 2.896443 CTCCTCGGAGTTCTGCCC 59.104 66.667 4.02 0.00 37.47 5.36
3275 6678 1.954362 CTCCTCGGAGTTCTGCCCAG 61.954 65.000 4.02 0.00 37.47 4.45
3281 6684 0.534873 GGAGTTCTGCCCAGAGAGAC 59.465 60.000 0.00 0.00 38.88 3.36
3287 6690 1.902508 TCTGCCCAGAGAGACGAAATT 59.097 47.619 0.00 0.00 32.82 1.82
3312 6715 3.004106 ACATTTGTCTCTCTGCAAACTGC 59.996 43.478 0.00 0.00 45.29 4.40
3328 6732 0.820891 CTGCCTGACCAACTTGCAGT 60.821 55.000 0.00 0.00 43.32 4.40
3355 6759 5.221342 TGTGTTGTGTTTCTTTGACAGGTTT 60.221 36.000 0.00 0.00 0.00 3.27
3359 6763 5.226396 TGTGTTTCTTTGACAGGTTTGTTG 58.774 37.500 0.00 0.00 37.76 3.33
3363 6767 5.913137 TTCTTTGACAGGTTTGTTGTGAT 57.087 34.783 0.00 0.00 37.76 3.06
3370 6774 3.255642 ACAGGTTTGTTGTGATGTATGCC 59.744 43.478 0.00 0.00 32.28 4.40
3395 6801 0.524816 GCAGCGAACATGCATTCAGG 60.525 55.000 0.00 0.00 43.31 3.86
3398 6804 2.031314 CAGCGAACATGCATTCAGGTAG 59.969 50.000 0.00 0.00 36.02 3.18
3399 6805 2.093500 AGCGAACATGCATTCAGGTAGA 60.093 45.455 0.00 0.00 36.02 2.59
3401 6807 2.282555 CGAACATGCATTCAGGTAGACG 59.717 50.000 0.00 0.00 36.02 4.18
3402 6808 3.262420 GAACATGCATTCAGGTAGACGT 58.738 45.455 0.00 0.00 36.02 4.34
3485 6891 7.034685 TGTATCAAATCAAAGGCATCATGAG 57.965 36.000 0.09 0.00 0.00 2.90
3486 6892 6.829811 TGTATCAAATCAAAGGCATCATGAGA 59.170 34.615 0.09 0.00 0.00 3.27
3487 6893 5.571784 TCAAATCAAAGGCATCATGAGAC 57.428 39.130 0.09 0.00 0.00 3.36
3488 6894 5.011586 TCAAATCAAAGGCATCATGAGACA 58.988 37.500 0.09 0.00 0.00 3.41
3490 6896 5.578005 AATCAAAGGCATCATGAGACAAG 57.422 39.130 0.09 0.00 0.00 3.16
3491 6897 2.751259 TCAAAGGCATCATGAGACAAGC 59.249 45.455 0.09 0.06 0.00 4.01
3492 6898 1.376543 AAGGCATCATGAGACAAGCG 58.623 50.000 0.09 0.00 0.00 4.68
3493 6899 1.094073 AGGCATCATGAGACAAGCGC 61.094 55.000 0.00 0.00 0.00 5.92
3494 6900 1.354506 GCATCATGAGACAAGCGCC 59.645 57.895 2.29 0.00 0.00 6.53
3495 6901 1.640069 CATCATGAGACAAGCGCCG 59.360 57.895 2.29 0.00 0.00 6.46
3496 6902 2.176273 ATCATGAGACAAGCGCCGC 61.176 57.895 2.29 0.00 0.00 6.53
3524 6930 4.521943 CAACTTTGCAAGAACTCTCGAAG 58.478 43.478 0.00 0.00 0.00 3.79
3525 6931 4.060038 ACTTTGCAAGAACTCTCGAAGA 57.940 40.909 0.00 0.00 0.00 2.87
3526 6932 3.804873 ACTTTGCAAGAACTCTCGAAGAC 59.195 43.478 0.00 0.00 0.00 3.01
3528 6934 3.667497 TGCAAGAACTCTCGAAGACAT 57.333 42.857 0.00 0.00 0.00 3.06
3529 6935 3.579709 TGCAAGAACTCTCGAAGACATC 58.420 45.455 0.00 0.00 0.00 3.06
3538 6944 3.015799 CGAAGACATCGTCGCTTGA 57.984 52.632 4.34 0.00 46.52 3.02
3540 6946 0.992802 GAAGACATCGTCGCTTGACC 59.007 55.000 2.56 0.00 39.56 4.02
3541 6947 0.603569 AAGACATCGTCGCTTGACCT 59.396 50.000 2.56 0.00 39.56 3.85
3542 6948 1.460504 AGACATCGTCGCTTGACCTA 58.539 50.000 2.56 0.00 39.56 3.08
3543 6949 1.816835 AGACATCGTCGCTTGACCTAA 59.183 47.619 2.56 0.00 39.56 2.69
3544 6950 2.230508 AGACATCGTCGCTTGACCTAAA 59.769 45.455 2.56 0.00 39.56 1.85
3545 6951 2.599082 GACATCGTCGCTTGACCTAAAG 59.401 50.000 2.56 0.00 39.56 1.85
3546 6952 2.230508 ACATCGTCGCTTGACCTAAAGA 59.769 45.455 2.56 0.00 39.56 2.52
3548 6954 2.942710 TCGTCGCTTGACCTAAAGAAG 58.057 47.619 0.00 0.00 39.56 2.85
3590 7022 3.620427 TGGTAATCCAGCAACGTGTAT 57.380 42.857 0.00 0.00 39.03 2.29
3593 7025 5.489249 TGGTAATCCAGCAACGTGTATAAA 58.511 37.500 0.00 0.00 39.03 1.40
3594 7026 5.583061 TGGTAATCCAGCAACGTGTATAAAG 59.417 40.000 0.00 0.00 39.03 1.85
3595 7027 5.007332 GGTAATCCAGCAACGTGTATAAAGG 59.993 44.000 0.00 0.00 0.00 3.11
3597 7029 4.274602 TCCAGCAACGTGTATAAAGGAA 57.725 40.909 0.00 0.00 0.00 3.36
3598 7030 4.250464 TCCAGCAACGTGTATAAAGGAAG 58.750 43.478 0.00 0.00 0.00 3.46
3651 7088 6.880529 TCATCTAGCAAGTTGATGATGTTCAA 59.119 34.615 21.79 9.27 40.81 2.69
3652 7089 7.391275 TCATCTAGCAAGTTGATGATGTTCAAA 59.609 33.333 21.79 9.03 40.81 2.69
3656 7093 6.576185 AGCAAGTTGATGATGTTCAAAAACT 58.424 32.000 7.16 3.62 37.56 2.66
3662 7099 7.170320 AGTTGATGATGTTCAAAAACTGCATTC 59.830 33.333 0.00 0.00 35.86 2.67
3663 7100 5.630264 TGATGATGTTCAAAAACTGCATTCG 59.370 36.000 0.00 0.00 36.30 3.34
3696 7133 5.957842 AATAAGGTTGACAAGAAATGCGA 57.042 34.783 0.00 0.00 0.00 5.10
3697 7134 3.626028 AAGGTTGACAAGAAATGCGAC 57.374 42.857 0.00 0.00 0.00 5.19
3704 7141 1.680735 ACAAGAAATGCGACTTTGCCA 59.319 42.857 0.00 0.00 0.00 4.92
3706 7143 1.609208 AGAAATGCGACTTTGCCACT 58.391 45.000 0.00 0.00 0.00 4.00
3717 7154 4.378616 CGACTTTGCCACTGAAAATAAACG 59.621 41.667 0.00 0.00 0.00 3.60
3719 7156 3.717400 TTGCCACTGAAAATAAACGCA 57.283 38.095 0.00 0.00 0.00 5.24
3720 7157 3.717400 TGCCACTGAAAATAAACGCAA 57.283 38.095 0.00 0.00 0.00 4.85
3724 7161 4.791411 GCCACTGAAAATAAACGCAAGACA 60.791 41.667 0.00 0.00 43.62 3.41
3742 7179 3.562557 AGACAACAAACCACCGTCAATAC 59.437 43.478 0.00 0.00 0.00 1.89
3748 7185 3.713826 AACCACCGTCAATACCAGAAT 57.286 42.857 0.00 0.00 0.00 2.40
3749 7186 4.829872 AACCACCGTCAATACCAGAATA 57.170 40.909 0.00 0.00 0.00 1.75
3763 7200 5.789643 ACCAGAATACAAACAAATGCACT 57.210 34.783 0.00 0.00 0.00 4.40
3768 7205 6.696583 CAGAATACAAACAAATGCACTGACAA 59.303 34.615 4.68 0.00 0.00 3.18
3774 7211 2.493278 ACAAATGCACTGACAATAGGCC 59.507 45.455 0.00 0.00 0.00 5.19
3790 7448 2.949447 AGGCCAACAAGTTGAGAATGT 58.051 42.857 10.54 0.00 42.93 2.71
3812 7470 0.833287 GTCCTCTGGCAAGGCTATCA 59.167 55.000 9.90 0.00 36.29 2.15
3837 7495 1.676746 TTCTGACGGAGGGAGATACG 58.323 55.000 0.00 0.00 0.00 3.06
3857 7515 3.319405 ACGAGTTCGATCAATCCTAGCAT 59.681 43.478 8.72 0.00 43.02 3.79
3861 7519 6.034363 CGAGTTCGATCAATCCTAGCATATTG 59.966 42.308 0.00 4.97 43.02 1.90
3863 7521 5.745312 TCGATCAATCCTAGCATATTGGT 57.255 39.130 9.48 4.32 34.52 3.67
3870 7528 3.928754 TCCTAGCATATTGGTCTGGTCT 58.071 45.455 0.00 0.00 0.00 3.85
3871 7529 3.898123 TCCTAGCATATTGGTCTGGTCTC 59.102 47.826 0.00 0.00 0.00 3.36
3874 7532 4.348863 AGCATATTGGTCTGGTCTCATC 57.651 45.455 0.00 0.00 0.00 2.92
3876 7534 4.350225 AGCATATTGGTCTGGTCTCATCAT 59.650 41.667 0.00 0.00 0.00 2.45
3878 7536 5.744007 GCATATTGGTCTGGTCTCATCATCA 60.744 44.000 0.00 0.00 0.00 3.07
3890 7548 4.578105 GTCTCATCATCAAATTCCTGTCCC 59.422 45.833 0.00 0.00 0.00 4.46
3892 7550 4.529897 TCATCATCAAATTCCTGTCCCAG 58.470 43.478 0.00 0.00 0.00 4.45
3899 7557 1.890552 ATTCCTGTCCCAGCATCTCT 58.109 50.000 0.00 0.00 0.00 3.10
3928 7586 4.067896 GTCTTCTGAATGCAGTCAAGGAA 58.932 43.478 18.56 16.66 42.84 3.36
3945 7625 6.483640 GTCAAGGAACTAGTTCAGAACATGTT 59.516 38.462 31.30 11.78 38.49 2.71
4016 7697 4.485024 CAGATTTCTGATATGGCAGCAC 57.515 45.455 1.15 0.00 46.59 4.40
4031 7712 2.103263 GCAGCACAATAGTAGGTAGGCT 59.897 50.000 0.00 0.00 0.00 4.58
4044 7725 0.733150 GTAGGCTTTTCCGACATGGC 59.267 55.000 0.00 0.00 39.87 4.40
4074 7755 4.729227 TCCCCAGTTTGTTTTCTGAAAC 57.271 40.909 1.58 0.00 44.29 2.78
4107 7788 6.775629 ACTGGAGAAGAGAGGTACTGATTATC 59.224 42.308 0.00 0.00 41.55 1.75
4116 7797 5.410132 AGAGGTACTGATTATCGAGACATCG 59.590 44.000 0.00 0.00 46.23 3.84
4149 7830 1.750682 GCCACATGGGTATGAGGTTCC 60.751 57.143 0.00 0.00 44.18 3.62
4164 7845 3.782046 AGGTTCCGATTATCAACTGACG 58.218 45.455 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.868160 ATAGAAAAATTATCACTCCTAAAGGGG 57.132 33.333 0.00 0.00 42.91 4.79
6 7 9.547753 GTGCTGATAGAAAAATTATCACTCCTA 57.452 33.333 0.00 0.00 34.67 2.94
7 8 8.049117 TGTGCTGATAGAAAAATTATCACTCCT 58.951 33.333 0.00 0.00 34.67 3.69
8 9 8.213518 TGTGCTGATAGAAAAATTATCACTCC 57.786 34.615 0.00 0.00 34.67 3.85
13 14 9.674824 CCAGATTGTGCTGATAGAAAAATTATC 57.325 33.333 0.00 0.00 38.14 1.75
14 15 9.412460 TCCAGATTGTGCTGATAGAAAAATTAT 57.588 29.630 0.00 0.00 38.14 1.28
15 16 8.806429 TCCAGATTGTGCTGATAGAAAAATTA 57.194 30.769 0.00 0.00 38.14 1.40
16 17 7.707624 TCCAGATTGTGCTGATAGAAAAATT 57.292 32.000 0.00 0.00 38.14 1.82
17 18 7.707624 TTCCAGATTGTGCTGATAGAAAAAT 57.292 32.000 0.00 0.00 38.14 1.82
18 19 7.707624 ATTCCAGATTGTGCTGATAGAAAAA 57.292 32.000 0.00 0.00 38.14 1.94
19 20 7.394077 TGAATTCCAGATTGTGCTGATAGAAAA 59.606 33.333 2.27 0.00 38.14 2.29
20 21 6.885918 TGAATTCCAGATTGTGCTGATAGAAA 59.114 34.615 2.27 0.00 38.14 2.52
21 22 6.317140 GTGAATTCCAGATTGTGCTGATAGAA 59.683 38.462 2.27 0.00 38.14 2.10
22 23 5.819379 GTGAATTCCAGATTGTGCTGATAGA 59.181 40.000 2.27 0.00 38.14 1.98
23 24 5.587443 TGTGAATTCCAGATTGTGCTGATAG 59.413 40.000 2.27 0.00 38.14 2.08
24 25 5.355071 GTGTGAATTCCAGATTGTGCTGATA 59.645 40.000 2.27 0.00 38.14 2.15
25 26 4.157289 GTGTGAATTCCAGATTGTGCTGAT 59.843 41.667 2.27 0.00 38.14 2.90
26 27 3.503363 GTGTGAATTCCAGATTGTGCTGA 59.497 43.478 2.27 0.00 38.14 4.26
27 28 3.504906 AGTGTGAATTCCAGATTGTGCTG 59.495 43.478 2.27 0.00 35.66 4.41
28 29 3.759581 AGTGTGAATTCCAGATTGTGCT 58.240 40.909 2.27 0.00 0.00 4.40
29 30 4.510038 AAGTGTGAATTCCAGATTGTGC 57.490 40.909 2.27 0.00 0.00 4.57
30 31 6.206243 AGAGAAAGTGTGAATTCCAGATTGTG 59.794 38.462 2.27 0.00 0.00 3.33
31 32 6.302269 AGAGAAAGTGTGAATTCCAGATTGT 58.698 36.000 2.27 0.00 0.00 2.71
32 33 6.429078 TGAGAGAAAGTGTGAATTCCAGATTG 59.571 38.462 2.27 0.00 0.00 2.67
33 34 6.537355 TGAGAGAAAGTGTGAATTCCAGATT 58.463 36.000 2.27 0.00 0.00 2.40
34 35 6.119240 TGAGAGAAAGTGTGAATTCCAGAT 57.881 37.500 2.27 0.00 0.00 2.90
35 36 5.551305 TGAGAGAAAGTGTGAATTCCAGA 57.449 39.130 2.27 0.00 0.00 3.86
36 37 6.624352 TTTGAGAGAAAGTGTGAATTCCAG 57.376 37.500 2.27 0.00 0.00 3.86
37 38 8.868522 ATATTTGAGAGAAAGTGTGAATTCCA 57.131 30.769 2.27 0.00 0.00 3.53
38 39 8.950210 TGATATTTGAGAGAAAGTGTGAATTCC 58.050 33.333 2.27 0.00 0.00 3.01
60 61 9.087424 CGAGTTGAAACTGTCAGAATATTGATA 57.913 33.333 6.91 0.00 39.88 2.15
61 62 7.413438 GCGAGTTGAAACTGTCAGAATATTGAT 60.413 37.037 6.91 0.00 39.88 2.57
62 63 6.128553 GCGAGTTGAAACTGTCAGAATATTGA 60.129 38.462 6.91 0.00 39.88 2.57
63 64 6.017933 GCGAGTTGAAACTGTCAGAATATTG 58.982 40.000 6.91 0.00 39.88 1.90
64 65 5.122396 GGCGAGTTGAAACTGTCAGAATATT 59.878 40.000 6.91 0.00 39.88 1.28
65 66 4.631813 GGCGAGTTGAAACTGTCAGAATAT 59.368 41.667 6.91 0.00 39.88 1.28
66 67 3.994392 GGCGAGTTGAAACTGTCAGAATA 59.006 43.478 6.91 0.00 39.88 1.75
67 68 2.808543 GGCGAGTTGAAACTGTCAGAAT 59.191 45.455 6.91 0.00 39.88 2.40
68 69 2.210116 GGCGAGTTGAAACTGTCAGAA 58.790 47.619 6.91 0.00 39.88 3.02
69 70 1.138069 TGGCGAGTTGAAACTGTCAGA 59.862 47.619 6.91 0.00 39.88 3.27
70 71 1.581934 TGGCGAGTTGAAACTGTCAG 58.418 50.000 0.00 0.00 39.88 3.51
71 72 2.254546 ATGGCGAGTTGAAACTGTCA 57.745 45.000 0.00 1.93 39.88 3.58
72 73 5.559035 GCATATATGGCGAGTTGAAACTGTC 60.559 44.000 14.51 0.00 39.88 3.51
73 74 4.273480 GCATATATGGCGAGTTGAAACTGT 59.727 41.667 14.51 0.00 39.88 3.55
74 75 4.319766 GGCATATATGGCGAGTTGAAACTG 60.320 45.833 21.95 0.00 43.58 3.16
75 76 3.815401 GGCATATATGGCGAGTTGAAACT 59.185 43.478 21.95 0.00 43.58 2.66
76 77 4.147219 GGCATATATGGCGAGTTGAAAC 57.853 45.455 21.95 0.00 43.58 2.78
87 88 3.273434 CTCCGTCAATGGGCATATATGG 58.727 50.000 14.51 0.00 0.00 2.74
88 89 2.679837 GCTCCGTCAATGGGCATATATG 59.320 50.000 8.45 8.45 0.00 1.78
89 90 2.573462 AGCTCCGTCAATGGGCATATAT 59.427 45.455 0.00 0.00 0.00 0.86
90 91 1.977854 AGCTCCGTCAATGGGCATATA 59.022 47.619 0.00 0.00 0.00 0.86
91 92 0.767375 AGCTCCGTCAATGGGCATAT 59.233 50.000 0.00 0.00 0.00 1.78
92 93 1.419381 TAGCTCCGTCAATGGGCATA 58.581 50.000 0.00 0.00 0.00 3.14
93 94 0.546122 TTAGCTCCGTCAATGGGCAT 59.454 50.000 0.00 0.00 0.00 4.40
94 95 0.326595 TTTAGCTCCGTCAATGGGCA 59.673 50.000 0.00 0.00 0.00 5.36
95 96 1.604278 GATTTAGCTCCGTCAATGGGC 59.396 52.381 0.00 0.00 0.00 5.36
96 97 2.222027 GGATTTAGCTCCGTCAATGGG 58.778 52.381 0.00 0.00 0.00 4.00
97 98 2.874701 CTGGATTTAGCTCCGTCAATGG 59.125 50.000 0.00 0.00 38.21 3.16
98 99 3.535561 ACTGGATTTAGCTCCGTCAATG 58.464 45.455 0.00 0.00 38.21 2.82
99 100 3.914426 ACTGGATTTAGCTCCGTCAAT 57.086 42.857 0.00 0.00 38.21 2.57
100 101 3.695830 AACTGGATTTAGCTCCGTCAA 57.304 42.857 0.00 0.00 38.21 3.18
101 102 3.695830 AAACTGGATTTAGCTCCGTCA 57.304 42.857 0.00 0.00 38.21 4.35
134 135 3.126001 TGTTCCTGGTGTAGAGCAAAG 57.874 47.619 0.00 0.00 0.00 2.77
139 140 6.633500 TTCAAAATTGTTCCTGGTGTAGAG 57.367 37.500 0.00 0.00 0.00 2.43
207 209 9.897744 CAATGTATTAGAAAATGTTCACTGTGT 57.102 29.630 7.79 0.00 36.09 3.72
301 323 8.964476 ATGAATGTGTACTCGGAAAATATTCT 57.036 30.769 0.00 0.00 35.79 2.40
329 351 9.916397 CGTTATCAAGAAATTAGGAATACACAC 57.084 33.333 0.00 0.00 0.00 3.82
362 401 9.620259 TTTGGGTTTATAAATTCTGCTTTGTTT 57.380 25.926 0.31 0.00 0.00 2.83
396 435 3.487376 CGTGCAAACCTATGCCTATGTTG 60.487 47.826 0.00 0.00 45.83 3.33
397 436 2.682856 CGTGCAAACCTATGCCTATGTT 59.317 45.455 0.00 0.00 45.83 2.71
398 437 2.288666 CGTGCAAACCTATGCCTATGT 58.711 47.619 0.00 0.00 45.83 2.29
402 441 2.081462 GTAACGTGCAAACCTATGCCT 58.919 47.619 0.00 0.00 45.83 4.75
425 464 1.293924 CCTCAAATAGACAGGCTGCG 58.706 55.000 15.89 0.00 0.00 5.18
453 519 3.907927 CGAGAGCTCCTAGTTGACG 57.092 57.895 10.93 0.39 0.00 4.35
479 545 4.808238 GCTTTGCTCGCTCGCAGC 62.808 66.667 6.44 6.44 41.55 5.25
528 596 2.979401 CGATGACGCTATCTACAGCT 57.021 50.000 0.00 0.00 39.51 4.24
540 608 1.225475 GTTTGTGAGCGCGATGACG 60.225 57.895 12.10 0.00 42.93 4.35
564 632 2.038033 GGCCCATATTGGAAGTAGCGTA 59.962 50.000 0.00 0.00 40.96 4.42
565 633 1.202770 GGCCCATATTGGAAGTAGCGT 60.203 52.381 0.00 0.00 40.96 5.07
566 634 1.072331 AGGCCCATATTGGAAGTAGCG 59.928 52.381 0.00 0.00 40.96 4.26
567 635 2.508526 CAGGCCCATATTGGAAGTAGC 58.491 52.381 0.00 0.00 40.96 3.58
576 645 1.456331 GCACAGGCAGGCCCATATT 60.456 57.895 6.70 0.00 40.72 1.28
603 672 3.281727 AACTGTCCAAAACTGCTGAGA 57.718 42.857 0.00 0.00 0.00 3.27
608 677 6.756542 ACAATAGAAAAACTGTCCAAAACTGC 59.243 34.615 0.00 0.00 0.00 4.40
609 678 8.702163 AACAATAGAAAAACTGTCCAAAACTG 57.298 30.769 0.00 0.00 0.00 3.16
619 688 7.277539 TGACCTGCAAAAACAATAGAAAAACTG 59.722 33.333 0.00 0.00 0.00 3.16
629 731 5.486526 TGAAAACTGACCTGCAAAAACAAT 58.513 33.333 0.00 0.00 0.00 2.71
636 738 2.293122 CCGAATGAAAACTGACCTGCAA 59.707 45.455 0.00 0.00 0.00 4.08
643 745 5.331876 ACAAAAACCCGAATGAAAACTGA 57.668 34.783 0.00 0.00 0.00 3.41
779 881 9.892130 ACACAAAAATGTTCACCCTTTTTATAA 57.108 25.926 0.00 0.00 32.43 0.98
780 882 9.319143 CACACAAAAATGTTCACCCTTTTTATA 57.681 29.630 0.00 0.00 32.43 0.98
781 883 8.043710 TCACACAAAAATGTTCACCCTTTTTAT 58.956 29.630 0.00 0.00 32.43 1.40
782 884 7.386851 TCACACAAAAATGTTCACCCTTTTTA 58.613 30.769 0.00 0.00 32.43 1.52
783 885 6.234177 TCACACAAAAATGTTCACCCTTTTT 58.766 32.000 0.00 0.00 33.57 1.94
784 886 5.799213 TCACACAAAAATGTTCACCCTTTT 58.201 33.333 0.00 0.00 0.00 2.27
785 887 5.413309 TCACACAAAAATGTTCACCCTTT 57.587 34.783 0.00 0.00 0.00 3.11
786 888 5.453198 GGATCACACAAAAATGTTCACCCTT 60.453 40.000 0.00 0.00 0.00 3.95
787 889 4.039124 GGATCACACAAAAATGTTCACCCT 59.961 41.667 0.00 0.00 0.00 4.34
788 890 4.039124 AGGATCACACAAAAATGTTCACCC 59.961 41.667 0.00 0.00 0.00 4.61
789 891 4.984161 CAGGATCACACAAAAATGTTCACC 59.016 41.667 0.00 0.00 0.00 4.02
790 892 5.830912 TCAGGATCACACAAAAATGTTCAC 58.169 37.500 0.00 0.00 0.00 3.18
791 893 6.462552 TTCAGGATCACACAAAAATGTTCA 57.537 33.333 0.00 0.00 0.00 3.18
792 894 7.147312 TGATTCAGGATCACACAAAAATGTTC 58.853 34.615 0.00 0.00 39.83 3.18
793 895 7.053316 TGATTCAGGATCACACAAAAATGTT 57.947 32.000 0.00 0.00 39.83 2.71
794 896 6.653526 TGATTCAGGATCACACAAAAATGT 57.346 33.333 0.00 0.00 39.83 2.71
806 908 8.464404 TCATGAGTTTGAAAATGATTCAGGATC 58.536 33.333 0.00 0.00 35.21 3.36
807 909 8.357290 TCATGAGTTTGAAAATGATTCAGGAT 57.643 30.769 0.00 0.00 0.00 3.24
808 910 7.764141 TCATGAGTTTGAAAATGATTCAGGA 57.236 32.000 0.00 0.00 0.00 3.86
809 911 8.086522 AGTTCATGAGTTTGAAAATGATTCAGG 58.913 33.333 0.00 0.00 37.36 3.86
810 912 9.472361 AAGTTCATGAGTTTGAAAATGATTCAG 57.528 29.630 0.00 0.00 37.36 3.02
811 913 9.820725 AAAGTTCATGAGTTTGAAAATGATTCA 57.179 25.926 0.00 0.00 37.36 2.57
813 915 9.603921 ACAAAGTTCATGAGTTTGAAAATGATT 57.396 25.926 27.06 9.46 46.91 2.57
814 916 9.037737 CACAAAGTTCATGAGTTTGAAAATGAT 57.962 29.630 27.06 9.97 46.91 2.45
815 917 8.249638 TCACAAAGTTCATGAGTTTGAAAATGA 58.750 29.630 27.06 20.05 46.91 2.57
816 918 8.410030 TCACAAAGTTCATGAGTTTGAAAATG 57.590 30.769 27.06 18.76 46.91 2.32
817 919 9.434420 TTTCACAAAGTTCATGAGTTTGAAAAT 57.566 25.926 27.06 11.25 46.91 1.82
818 920 8.824159 TTTCACAAAGTTCATGAGTTTGAAAA 57.176 26.923 27.06 22.75 46.91 2.29
819 921 9.434420 AATTTCACAAAGTTCATGAGTTTGAAA 57.566 25.926 27.06 20.85 46.91 2.69
820 922 9.434420 AAATTTCACAAAGTTCATGAGTTTGAA 57.566 25.926 27.06 17.00 46.91 2.69
821 923 9.086336 GAAATTTCACAAAGTTCATGAGTTTGA 57.914 29.630 27.06 13.27 46.91 2.69
823 925 7.254084 GCGAAATTTCACAAAGTTCATGAGTTT 60.254 33.333 17.99 0.00 43.49 2.66
824 926 6.198966 GCGAAATTTCACAAAGTTCATGAGTT 59.801 34.615 17.99 0.00 43.49 3.01
825 927 5.687285 GCGAAATTTCACAAAGTTCATGAGT 59.313 36.000 17.99 0.00 43.49 3.41
826 928 5.686841 TGCGAAATTTCACAAAGTTCATGAG 59.313 36.000 17.99 0.00 43.49 2.90
827 929 5.586339 TGCGAAATTTCACAAAGTTCATGA 58.414 33.333 17.99 0.00 43.49 3.07
828 930 5.886715 TGCGAAATTTCACAAAGTTCATG 57.113 34.783 17.99 0.00 43.49 3.07
829 931 6.312426 TGTTTGCGAAATTTCACAAAGTTCAT 59.688 30.769 26.63 0.00 43.49 2.57
830 932 5.635280 TGTTTGCGAAATTTCACAAAGTTCA 59.365 32.000 26.63 20.15 43.49 3.18
831 933 6.088719 TGTTTGCGAAATTTCACAAAGTTC 57.911 33.333 26.63 18.40 39.16 3.01
832 934 6.091986 ACATGTTTGCGAAATTTCACAAAGTT 59.908 30.769 26.63 17.38 39.16 2.66
833 935 5.580297 ACATGTTTGCGAAATTTCACAAAGT 59.420 32.000 26.63 20.12 39.16 2.66
834 936 6.035070 ACATGTTTGCGAAATTTCACAAAG 57.965 33.333 26.63 19.63 39.16 2.77
835 937 6.414408 AACATGTTTGCGAAATTTCACAAA 57.586 29.167 23.74 23.74 37.01 2.83
836 938 6.414408 AAACATGTTTGCGAAATTTCACAA 57.586 29.167 22.71 15.81 0.00 3.33
837 939 6.414408 AAAACATGTTTGCGAAATTTCACA 57.586 29.167 23.93 11.69 32.36 3.58
838 940 8.813263 TTAAAAACATGTTTGCGAAATTTCAC 57.187 26.923 23.93 9.05 32.36 3.18
839 941 9.483062 CTTTAAAAACATGTTTGCGAAATTTCA 57.517 25.926 23.93 2.44 32.36 2.69
840 942 9.484326 ACTTTAAAAACATGTTTGCGAAATTTC 57.516 25.926 23.93 8.20 32.36 2.17
841 943 9.484326 GACTTTAAAAACATGTTTGCGAAATTT 57.516 25.926 23.93 14.49 32.36 1.82
842 944 8.660373 TGACTTTAAAAACATGTTTGCGAAATT 58.340 25.926 23.93 16.54 32.36 1.82
843 945 8.190888 TGACTTTAAAAACATGTTTGCGAAAT 57.809 26.923 23.93 9.11 32.36 2.17
844 946 7.582435 TGACTTTAAAAACATGTTTGCGAAA 57.418 28.000 23.93 20.03 32.36 3.46
845 947 7.305705 CGATGACTTTAAAAACATGTTTGCGAA 60.306 33.333 23.93 14.86 32.36 4.70
846 948 6.141527 CGATGACTTTAAAAACATGTTTGCGA 59.858 34.615 23.93 9.89 32.36 5.10
847 949 6.141527 TCGATGACTTTAAAAACATGTTTGCG 59.858 34.615 23.93 12.71 32.36 4.85
848 950 7.388290 TCGATGACTTTAAAAACATGTTTGC 57.612 32.000 23.93 8.35 32.36 3.68
849 951 9.179552 TGATCGATGACTTTAAAAACATGTTTG 57.820 29.630 23.93 13.41 32.36 2.93
850 952 9.743057 TTGATCGATGACTTTAAAAACATGTTT 57.257 25.926 18.13 18.13 0.00 2.83
851 953 9.180678 GTTGATCGATGACTTTAAAAACATGTT 57.819 29.630 4.92 4.92 0.00 2.71
852 954 7.807907 GGTTGATCGATGACTTTAAAAACATGT 59.192 33.333 0.54 0.00 0.00 3.21
853 955 7.807433 TGGTTGATCGATGACTTTAAAAACATG 59.193 33.333 0.54 0.00 0.00 3.21
854 956 7.881142 TGGTTGATCGATGACTTTAAAAACAT 58.119 30.769 0.54 6.52 0.00 2.71
855 957 7.265647 TGGTTGATCGATGACTTTAAAAACA 57.734 32.000 0.54 0.00 0.00 2.83
856 958 6.305638 GCTGGTTGATCGATGACTTTAAAAAC 59.694 38.462 0.54 0.00 0.00 2.43
857 959 6.378582 GCTGGTTGATCGATGACTTTAAAAA 58.621 36.000 0.54 0.00 0.00 1.94
858 960 5.106317 GGCTGGTTGATCGATGACTTTAAAA 60.106 40.000 0.54 0.00 0.00 1.52
859 961 4.394920 GGCTGGTTGATCGATGACTTTAAA 59.605 41.667 0.54 0.00 0.00 1.52
860 962 3.938963 GGCTGGTTGATCGATGACTTTAA 59.061 43.478 0.54 0.00 0.00 1.52
861 963 3.531538 GGCTGGTTGATCGATGACTTTA 58.468 45.455 0.54 0.00 0.00 1.85
862 964 2.359900 GGCTGGTTGATCGATGACTTT 58.640 47.619 0.54 0.00 0.00 2.66
863 965 1.740380 CGGCTGGTTGATCGATGACTT 60.740 52.381 0.54 0.00 0.00 3.01
864 966 0.179100 CGGCTGGTTGATCGATGACT 60.179 55.000 0.54 0.00 0.00 3.41
865 967 1.154205 CCGGCTGGTTGATCGATGAC 61.154 60.000 0.54 0.77 0.00 3.06
866 968 1.143838 CCGGCTGGTTGATCGATGA 59.856 57.895 0.54 0.00 0.00 2.92
867 969 2.537560 GCCGGCTGGTTGATCGATG 61.538 63.158 22.15 0.00 37.67 3.84
868 970 2.203070 GCCGGCTGGTTGATCGAT 60.203 61.111 22.15 0.00 37.67 3.59
869 971 4.467084 GGCCGGCTGGTTGATCGA 62.467 66.667 28.56 0.00 37.67 3.59
882 984 4.776322 TCACTGATTGGCCGGCCG 62.776 66.667 39.00 26.78 39.42 6.13
883 985 2.825836 CTCACTGATTGGCCGGCC 60.826 66.667 39.40 39.40 0.00 6.13
884 986 3.512516 GCTCACTGATTGGCCGGC 61.513 66.667 21.18 21.18 0.00 6.13
885 987 3.197790 CGCTCACTGATTGGCCGG 61.198 66.667 0.00 0.00 0.00 6.13
886 988 1.741401 TTCGCTCACTGATTGGCCG 60.741 57.895 0.00 0.00 0.00 6.13
887 989 1.648467 GGTTCGCTCACTGATTGGCC 61.648 60.000 0.00 0.00 0.00 5.36
888 990 1.648467 GGGTTCGCTCACTGATTGGC 61.648 60.000 0.00 0.00 0.00 4.52
889 991 1.026718 GGGGTTCGCTCACTGATTGG 61.027 60.000 0.00 0.00 0.00 3.16
890 992 0.321564 TGGGGTTCGCTCACTGATTG 60.322 55.000 0.00 0.00 0.00 2.67
891 993 0.036010 CTGGGGTTCGCTCACTGATT 60.036 55.000 0.00 0.00 0.00 2.57
892 994 1.599047 CTGGGGTTCGCTCACTGAT 59.401 57.895 0.00 0.00 0.00 2.90
893 995 3.059982 CTGGGGTTCGCTCACTGA 58.940 61.111 0.00 0.00 0.00 3.41
894 996 2.743928 GCTGGGGTTCGCTCACTG 60.744 66.667 0.00 0.00 0.00 3.66
895 997 4.021925 GGCTGGGGTTCGCTCACT 62.022 66.667 0.00 0.00 0.00 3.41
992 1094 1.323271 GGTGTCGGCTCTCATCAGGA 61.323 60.000 0.00 0.00 0.00 3.86
1011 1113 3.708734 GAAACGGGGCGTGTCACG 61.709 66.667 21.02 21.02 42.88 4.35
1012 1114 1.838568 GAAGAAACGGGGCGTGTCAC 61.839 60.000 0.00 0.00 45.43 3.67
1013 1115 1.595929 GAAGAAACGGGGCGTGTCA 60.596 57.895 0.00 0.00 45.43 3.58
1014 1116 2.664436 CGAAGAAACGGGGCGTGTC 61.664 63.158 0.00 0.00 43.60 3.67
1117 1219 0.106217 GTGGGAGAGGGAGAGGAGAG 60.106 65.000 0.00 0.00 0.00 3.20
1120 1222 0.553862 AGAGTGGGAGAGGGAGAGGA 60.554 60.000 0.00 0.00 0.00 3.71
1135 1237 1.359474 TCTAGCAGGAGGTTCCAGAGT 59.641 52.381 0.00 0.00 39.61 3.24
1247 1358 5.186797 ACTGAAATTCCAAACACACTCCAAA 59.813 36.000 0.00 0.00 0.00 3.28
1248 1359 4.709397 ACTGAAATTCCAAACACACTCCAA 59.291 37.500 0.00 0.00 0.00 3.53
1256 1367 5.369833 TCGAACCTACTGAAATTCCAAACA 58.630 37.500 0.00 0.00 0.00 2.83
1257 1368 5.934935 TCGAACCTACTGAAATTCCAAAC 57.065 39.130 0.00 0.00 0.00 2.93
1267 1378 1.403647 CGCCAACATCGAACCTACTGA 60.404 52.381 0.00 0.00 0.00 3.41
1274 1385 4.160635 CCGCCGCCAACATCGAAC 62.161 66.667 0.00 0.00 0.00 3.95
1347 1458 0.664767 GCTACGGATGCCTAAGCGAG 60.665 60.000 0.00 0.00 44.31 5.03
1402 1518 1.904032 CTTCAGCTCCAGACCTCCC 59.096 63.158 0.00 0.00 0.00 4.30
1469 1588 0.991920 TTCATGTCCACCTCCTTCCC 59.008 55.000 0.00 0.00 0.00 3.97
1470 1589 1.909302 TCTTCATGTCCACCTCCTTCC 59.091 52.381 0.00 0.00 0.00 3.46
1471 1590 3.261897 TCTTCTTCATGTCCACCTCCTTC 59.738 47.826 0.00 0.00 0.00 3.46
1533 1673 2.500910 AGGACTGAATCAAGGCAGAGAG 59.499 50.000 0.00 0.00 36.07 3.20
1574 1734 7.384115 TGCAGGTTATATATCTTTTACTGTCGC 59.616 37.037 0.00 0.00 0.00 5.19
1712 1888 5.818136 TCAGCAATCTATGGTAAAACAGC 57.182 39.130 0.00 0.00 37.77 4.40
1722 1898 6.561614 GCCCATATTCATTCAGCAATCTATG 58.438 40.000 0.00 0.00 0.00 2.23
1726 1902 3.503363 TCGCCCATATTCATTCAGCAATC 59.497 43.478 0.00 0.00 0.00 2.67
1734 1910 3.507162 TGACCATCGCCCATATTCATT 57.493 42.857 0.00 0.00 0.00 2.57
1758 1945 3.146066 GTCATCACAGTAAAACAGCCCA 58.854 45.455 0.00 0.00 0.00 5.36
1770 1957 5.752472 CCTAGCAACTATCAAGTCATCACAG 59.248 44.000 0.00 0.00 33.75 3.66
1778 1965 6.394025 GCTACTACCTAGCAACTATCAAGT 57.606 41.667 0.00 0.00 46.56 3.16
1790 1980 4.017808 AGTGGTCAGTTGCTACTACCTAG 58.982 47.826 19.31 3.43 33.15 3.02
1839 2048 3.327757 AGATGTTGCAGGTCTTCTGGTAA 59.672 43.478 0.00 0.00 43.54 2.85
1909 2118 3.404224 AGCAATGAGATGAGCATCGAT 57.596 42.857 4.93 0.00 42.48 3.59
1922 2131 6.753279 CACAACAAGAAGAAGAAAAGCAATGA 59.247 34.615 0.00 0.00 0.00 2.57
1926 4807 4.462483 ACCACAACAAGAAGAAGAAAAGCA 59.538 37.500 0.00 0.00 0.00 3.91
1933 4814 4.399303 AGTTCCAACCACAACAAGAAGAAG 59.601 41.667 0.00 0.00 0.00 2.85
1936 4817 4.423732 CAAGTTCCAACCACAACAAGAAG 58.576 43.478 0.00 0.00 0.00 2.85
1939 4820 2.757868 TCCAAGTTCCAACCACAACAAG 59.242 45.455 0.00 0.00 0.00 3.16
1947 4828 2.037121 CCACCAATTCCAAGTTCCAACC 59.963 50.000 0.00 0.00 0.00 3.77
1952 4833 5.523438 TTAACACCACCAATTCCAAGTTC 57.477 39.130 0.00 0.00 0.00 3.01
1953 4834 6.126911 ACAATTAACACCACCAATTCCAAGTT 60.127 34.615 0.00 0.00 0.00 2.66
1954 4835 5.365314 ACAATTAACACCACCAATTCCAAGT 59.635 36.000 0.00 0.00 0.00 3.16
1955 4836 5.852827 ACAATTAACACCACCAATTCCAAG 58.147 37.500 0.00 0.00 0.00 3.61
1983 4864 4.142381 ACCAAGAAGCACACAGAAAAAGAC 60.142 41.667 0.00 0.00 0.00 3.01
2038 4925 4.442733 GCGATATCAAGTTGCTCTGAGTAC 59.557 45.833 6.53 5.38 0.00 2.73
2079 4967 0.109913 TCATGATGCCTGATCCAGCC 59.890 55.000 0.00 0.00 0.00 4.85
2100 4988 2.582052 TCAAATTTCTGCGGTGAACCT 58.418 42.857 0.00 0.00 0.00 3.50
2108 4996 5.333046 AGTTGCAATTTCAAATTTCTGCG 57.667 34.783 0.59 0.00 32.45 5.18
2152 5081 5.600484 ACCTGATTAGAGAGAATTCACCGAT 59.400 40.000 8.44 0.00 0.00 4.18
2285 5277 0.629596 AGTCCCGTATCCAGTCTCCA 59.370 55.000 0.00 0.00 0.00 3.86
2286 5278 1.033574 CAGTCCCGTATCCAGTCTCC 58.966 60.000 0.00 0.00 0.00 3.71
2287 5279 1.765230 ACAGTCCCGTATCCAGTCTC 58.235 55.000 0.00 0.00 0.00 3.36
2307 5299 6.069673 ACCTTCATAATGGGTCTATTGTGACA 60.070 38.462 6.12 0.00 37.73 3.58
2485 5479 9.130661 ACAATTGCATATACAGCCTATAAACAA 57.869 29.630 5.05 0.00 0.00 2.83
2486 5480 8.690203 ACAATTGCATATACAGCCTATAAACA 57.310 30.769 5.05 0.00 0.00 2.83
2497 5491 7.098074 TGAATGCTCAACAATTGCATATACA 57.902 32.000 5.05 0.00 45.29 2.29
2498 5492 6.143438 GCTGAATGCTCAACAATTGCATATAC 59.857 38.462 5.05 0.13 45.29 1.47
2499 5493 6.210796 GCTGAATGCTCAACAATTGCATATA 58.789 36.000 5.05 0.00 45.29 0.86
2500 5494 5.047847 GCTGAATGCTCAACAATTGCATAT 58.952 37.500 5.05 0.00 45.29 1.78
2671 5665 2.040278 AGAGTGGCCTCTCCCCTG 59.960 66.667 27.22 0.00 45.08 4.45
2786 5780 1.813513 AGACGAACCTGAAATGCCAG 58.186 50.000 0.00 0.00 0.00 4.85
2791 5785 2.863809 AGGCAAAGACGAACCTGAAAT 58.136 42.857 0.00 0.00 0.00 2.17
2802 5797 8.131731 GGATTCTATTTATTGACAGGCAAAGAC 58.868 37.037 0.00 0.00 40.48 3.01
2830 5825 9.294030 CTGCAAATCCAAGTAAAAGAATATCAC 57.706 33.333 0.00 0.00 0.00 3.06
2835 5830 6.100404 TGCTGCAAATCCAAGTAAAAGAAT 57.900 33.333 0.00 0.00 0.00 2.40
2838 5833 5.531634 TCTTGCTGCAAATCCAAGTAAAAG 58.468 37.500 16.74 0.00 37.72 2.27
2839 5834 5.509501 CCTCTTGCTGCAAATCCAAGTAAAA 60.510 40.000 16.74 0.00 37.72 1.52
2880 5882 3.635373 ACGTCACAACTAGAAGAACTCCA 59.365 43.478 0.00 0.00 0.00 3.86
2918 5920 6.265196 ACACTTATTGACAGGCAAAGATTGAA 59.735 34.615 0.00 0.00 40.48 2.69
2928 5930 4.822026 ACAGTAGACACTTATTGACAGGC 58.178 43.478 0.00 0.00 30.46 4.85
2929 5931 6.274157 AGACAGTAGACACTTATTGACAGG 57.726 41.667 0.00 0.00 30.46 4.00
2930 5932 7.433719 GCATAGACAGTAGACACTTATTGACAG 59.566 40.741 0.00 0.00 30.46 3.51
2931 5933 7.122799 AGCATAGACAGTAGACACTTATTGACA 59.877 37.037 0.00 0.00 30.46 3.58
2932 5934 7.484975 AGCATAGACAGTAGACACTTATTGAC 58.515 38.462 0.00 0.00 30.46 3.18
2935 5937 7.761704 CACAAGCATAGACAGTAGACACTTATT 59.238 37.037 0.00 0.00 30.46 1.40
2936 5938 7.122799 TCACAAGCATAGACAGTAGACACTTAT 59.877 37.037 0.00 0.00 30.46 1.73
2937 5939 6.433093 TCACAAGCATAGACAGTAGACACTTA 59.567 38.462 0.00 0.00 30.46 2.24
2960 6203 6.016024 AGCACTGCTGAATTTCAAGTTATTCA 60.016 34.615 1.67 0.00 37.57 2.57
2987 6230 2.267006 CAGGCAGCCATCGACAGT 59.733 61.111 15.80 0.00 0.00 3.55
3011 6254 7.332678 AGGAACAACACAATAGTTTACCGATAC 59.667 37.037 0.00 0.00 0.00 2.24
3012 6255 7.332430 CAGGAACAACACAATAGTTTACCGATA 59.668 37.037 0.00 0.00 0.00 2.92
3117 6513 3.610040 TGCGTCCTTCATCACTTACAT 57.390 42.857 0.00 0.00 0.00 2.29
3121 6519 1.204704 TCGATGCGTCCTTCATCACTT 59.795 47.619 0.00 0.00 40.11 3.16
3127 6525 1.136774 CTCGTCGATGCGTCCTTCA 59.863 57.895 0.00 0.00 0.00 3.02
3129 6527 1.025113 TCTCTCGTCGATGCGTCCTT 61.025 55.000 0.00 0.00 0.00 3.36
3140 6538 8.463607 CCTCCTTAAAATAGGATATCTCTCGTC 58.536 40.741 2.05 0.00 43.24 4.20
3167 6565 3.449746 TTTCCCTGATTTGAATCCCGT 57.550 42.857 1.56 0.00 34.50 5.28
3171 6569 6.973460 AGGATCATTTCCCTGATTTGAATC 57.027 37.500 0.00 0.00 46.81 2.52
3212 6614 9.884465 CATAGAGACAAGAAAAGAAAACGAATT 57.116 29.630 0.00 0.00 0.00 2.17
3234 6637 9.649167 AGGAGCTTTCAAAAATCAAAATCATAG 57.351 29.630 0.00 0.00 0.00 2.23
3250 6653 1.273606 CAGAACTCCGAGGAGCTTTCA 59.726 52.381 18.37 0.00 45.54 2.69
3251 6654 2.003196 CAGAACTCCGAGGAGCTTTC 57.997 55.000 18.37 14.80 45.54 2.62
3262 6665 0.534873 GTCTCTCTGGGCAGAACTCC 59.465 60.000 0.00 0.00 36.94 3.85
3273 6676 7.116948 AGACAAATGTACAATTTCGTCTCTCTG 59.883 37.037 9.68 0.00 30.87 3.35
3275 6678 7.329717 AGAGACAAATGTACAATTTCGTCTCTC 59.670 37.037 26.14 15.85 43.21 3.20
3281 6684 6.017933 GCAGAGAGACAAATGTACAATTTCG 58.982 40.000 0.00 0.00 0.00 3.46
3287 6690 5.237127 CAGTTTGCAGAGAGACAAATGTACA 59.763 40.000 0.00 0.00 38.01 2.90
3328 6732 5.335583 CCTGTCAAAGAAACACAACACAGAA 60.336 40.000 0.00 0.00 33.30 3.02
3355 6759 3.689161 GCTTACAGGCATACATCACAACA 59.311 43.478 0.00 0.00 0.00 3.33
3359 6763 2.289002 GCTGCTTACAGGCATACATCAC 59.711 50.000 0.00 0.00 44.63 3.06
3363 6767 0.534873 TCGCTGCTTACAGGCATACA 59.465 50.000 0.00 0.00 44.63 2.29
3502 6908 4.271049 TCTTCGAGAGTTCTTGCAAAGTTG 59.729 41.667 0.00 0.00 46.34 3.16
3503 6909 4.271291 GTCTTCGAGAGTTCTTGCAAAGTT 59.729 41.667 0.00 0.00 46.34 2.66
3504 6910 3.804873 GTCTTCGAGAGTTCTTGCAAAGT 59.195 43.478 0.00 0.00 46.34 2.66
3508 6914 3.579709 GATGTCTTCGAGAGTTCTTGCA 58.420 45.455 0.00 0.00 0.00 4.08
3521 6927 0.992802 GGTCAAGCGACGATGTCTTC 59.007 55.000 0.00 0.00 43.61 2.87
3522 6928 0.603569 AGGTCAAGCGACGATGTCTT 59.396 50.000 0.00 0.00 43.61 3.01
3524 6930 2.273370 TTAGGTCAAGCGACGATGTC 57.727 50.000 0.00 0.00 43.61 3.06
3525 6931 2.230508 TCTTTAGGTCAAGCGACGATGT 59.769 45.455 0.00 0.00 43.61 3.06
3526 6932 2.876091 TCTTTAGGTCAAGCGACGATG 58.124 47.619 0.00 0.00 43.61 3.84
3528 6934 2.352421 CCTTCTTTAGGTCAAGCGACGA 60.352 50.000 0.00 0.00 43.61 4.20
3529 6935 1.993370 CCTTCTTTAGGTCAAGCGACG 59.007 52.381 0.00 0.00 43.61 5.12
3530 6936 1.732809 GCCTTCTTTAGGTCAAGCGAC 59.267 52.381 0.00 0.00 46.61 5.19
3531 6937 1.346395 TGCCTTCTTTAGGTCAAGCGA 59.654 47.619 0.00 0.00 46.61 4.93
3532 6938 1.808411 TGCCTTCTTTAGGTCAAGCG 58.192 50.000 0.00 0.00 46.61 4.68
3548 6954 7.555965 ACCATTTTTATGTTAGGAAGAATGCC 58.444 34.615 0.00 0.00 0.00 4.40
3559 6991 7.971168 CGTTGCTGGATTACCATTTTTATGTTA 59.029 33.333 0.00 0.00 45.87 2.41
3566 6998 3.572255 ACACGTTGCTGGATTACCATTTT 59.428 39.130 0.00 0.00 45.87 1.82
3570 7002 3.620427 ATACACGTTGCTGGATTACCA 57.380 42.857 0.00 0.00 44.76 3.25
3597 7029 3.950395 GCTACCATTTCAGAAGAATGCCT 59.050 43.478 0.00 0.00 32.89 4.75
3598 7030 3.696051 TGCTACCATTTCAGAAGAATGCC 59.304 43.478 0.00 0.00 32.89 4.40
3633 7070 6.642917 CAGTTTTTGAACATCATCAACTTGC 58.357 36.000 3.26 0.00 38.95 4.01
3645 7082 2.468831 GCCGAATGCAGTTTTTGAACA 58.531 42.857 0.00 0.00 40.77 3.18
3684 7121 1.680735 TGGCAAAGTCGCATTTCTTGT 59.319 42.857 0.00 0.00 0.00 3.16
3696 7133 4.048504 GCGTTTATTTTCAGTGGCAAAGT 58.951 39.130 0.00 0.00 0.00 2.66
3697 7134 4.047822 TGCGTTTATTTTCAGTGGCAAAG 58.952 39.130 0.00 0.00 0.00 2.77
3704 7141 5.885881 TGTTGTCTTGCGTTTATTTTCAGT 58.114 33.333 0.00 0.00 0.00 3.41
3706 7143 6.035112 GGTTTGTTGTCTTGCGTTTATTTTCA 59.965 34.615 0.00 0.00 0.00 2.69
3717 7154 0.454196 ACGGTGGTTTGTTGTCTTGC 59.546 50.000 0.00 0.00 0.00 4.01
3719 7156 2.116827 TGACGGTGGTTTGTTGTCTT 57.883 45.000 0.00 0.00 0.00 3.01
3720 7157 2.116827 TTGACGGTGGTTTGTTGTCT 57.883 45.000 0.00 0.00 0.00 3.41
3724 7161 2.882137 CTGGTATTGACGGTGGTTTGTT 59.118 45.455 0.00 0.00 0.00 2.83
3742 7179 5.630680 GTCAGTGCATTTGTTTGTATTCTGG 59.369 40.000 0.00 0.00 0.00 3.86
3748 7185 6.676950 CCTATTGTCAGTGCATTTGTTTGTA 58.323 36.000 0.00 0.00 0.00 2.41
3749 7186 5.531634 CCTATTGTCAGTGCATTTGTTTGT 58.468 37.500 0.00 0.00 0.00 2.83
3763 7200 3.820467 CTCAACTTGTTGGCCTATTGTCA 59.180 43.478 3.32 0.00 0.00 3.58
3768 7205 4.666512 ACATTCTCAACTTGTTGGCCTAT 58.333 39.130 3.32 1.15 0.00 2.57
3774 7211 4.750098 AGGACGTACATTCTCAACTTGTTG 59.250 41.667 0.00 7.13 0.00 3.33
3790 7448 0.323999 TAGCCTTGCCAGAGGACGTA 60.324 55.000 0.00 0.00 39.25 3.57
3812 7470 2.637872 TCTCCCTCCGTCAGAAATTTGT 59.362 45.455 0.00 0.00 0.00 2.83
3837 7495 6.312426 CCAATATGCTAGGATTGATCGAACTC 59.688 42.308 0.65 0.00 35.46 3.01
3857 7515 5.955961 TTGATGATGAGACCAGACCAATA 57.044 39.130 0.00 0.00 0.00 1.90
3861 7519 4.578105 GGAATTTGATGATGAGACCAGACC 59.422 45.833 0.00 0.00 0.00 3.85
3863 7521 5.045359 ACAGGAATTTGATGATGAGACCAGA 60.045 40.000 0.00 0.00 0.00 3.86
3870 7528 4.589647 TGGGACAGGAATTTGATGATGA 57.410 40.909 0.00 0.00 0.00 2.92
3890 7548 3.385433 AGAAGACAGATCCAGAGATGCTG 59.615 47.826 0.00 0.00 44.49 4.41
3892 7550 3.384146 TCAGAAGACAGATCCAGAGATGC 59.616 47.826 0.00 0.00 30.90 3.91
3899 7557 3.262660 ACTGCATTCAGAAGACAGATCCA 59.737 43.478 17.94 0.00 42.95 3.41
3904 7562 3.436015 CCTTGACTGCATTCAGAAGACAG 59.564 47.826 6.85 11.86 42.95 3.51
3906 7564 3.668447 TCCTTGACTGCATTCAGAAGAC 58.332 45.455 6.85 0.00 42.95 3.01
3928 7586 8.902540 TTATTCACAACATGTTCTGAACTAGT 57.097 30.769 25.45 15.29 31.97 2.57
3979 7660 8.327941 CAGAAATCTGAAATCTTCAACAGGTA 57.672 34.615 4.37 0.00 46.59 3.08
3980 7661 7.211966 CAGAAATCTGAAATCTTCAACAGGT 57.788 36.000 4.37 0.00 46.59 4.00
4016 7697 5.048507 GTCGGAAAAGCCTACCTACTATTG 58.951 45.833 0.00 0.00 0.00 1.90
4031 7712 2.121291 TATGCTGCCATGTCGGAAAA 57.879 45.000 0.00 0.00 36.56 2.29
4044 7725 4.806640 AACAAACTGGGGATTTATGCTG 57.193 40.909 0.00 0.00 0.00 4.41
4089 7770 6.358178 TGTCTCGATAATCAGTACCTCTCTT 58.642 40.000 0.00 0.00 0.00 2.85
4107 7788 4.551603 GCCATCTTTGATTTCGATGTCTCG 60.552 45.833 0.00 0.00 46.41 4.04
4116 7797 3.431207 CCCATGTGGCCATCTTTGATTTC 60.431 47.826 9.72 0.00 0.00 2.17
4122 7803 2.244510 TCATACCCATGTGGCCATCTTT 59.755 45.455 9.72 0.00 37.83 2.52
4129 7810 1.680338 GAACCTCATACCCATGTGGC 58.320 55.000 5.80 0.00 45.75 5.01
4149 7830 3.116300 CTGGGACGTCAGTTGATAATCG 58.884 50.000 18.91 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.