Multiple sequence alignment - TraesCS6D01G389400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G389400 chr6D 100.000 3500 0 0 1 3500 464983426 464986925 0.000000e+00 6464
1 TraesCS6D01G389400 chr6D 91.780 1253 63 16 496 1724 465012119 465010883 0.000000e+00 1707
2 TraesCS6D01G389400 chr6D 95.364 151 7 0 1848 1998 465010805 465010655 1.260000e-59 241
3 TraesCS6D01G389400 chr6D 97.414 116 2 1 2110 2224 465010525 465010410 2.760000e-46 196
4 TraesCS6D01G389400 chr6D 85.496 131 16 3 1 131 27329422 27329549 2.190000e-27 134
5 TraesCS6D01G389400 chr6B 90.083 2531 145 47 446 2938 708988176 708990638 0.000000e+00 3186
6 TraesCS6D01G389400 chr6B 88.610 1115 63 32 941 2047 709020831 709019773 0.000000e+00 1297
7 TraesCS6D01G389400 chr6B 89.754 244 17 4 3261 3500 708990849 708991088 4.390000e-79 305
8 TraesCS6D01G389400 chr6B 93.252 163 10 1 284 445 699977448 699977610 4.520000e-59 239
9 TraesCS6D01G389400 chr6B 91.391 151 10 2 2077 2224 709019777 709019627 1.650000e-48 204
10 TraesCS6D01G389400 chr6B 92.063 126 5 3 3063 3187 195807172 195807051 4.640000e-39 172
11 TraesCS6D01G389400 chr6B 84.167 120 18 1 159 277 708988045 708988164 7.940000e-22 115
12 TraesCS6D01G389400 chr6A 86.780 2534 156 85 445 2922 611512688 611515098 0.000000e+00 2658
13 TraesCS6D01G389400 chr6A 88.880 1196 85 32 1041 2223 611523234 611522074 0.000000e+00 1428
14 TraesCS6D01G389400 chr6A 86.939 245 20 4 3260 3496 611515471 611515711 7.450000e-67 265
15 TraesCS6D01G389400 chr6A 84.024 169 20 5 2907 3073 611515197 611515360 4.680000e-34 156
16 TraesCS6D01G389400 chr6A 83.206 131 19 3 1 131 94111466 94111593 2.210000e-22 117
17 TraesCS6D01G389400 chr5D 87.358 878 88 17 860 1729 287571947 287571085 0.000000e+00 985
18 TraesCS6D01G389400 chr5D 94.375 160 9 0 1847 2006 287571008 287570849 2.700000e-61 246
19 TraesCS6D01G389400 chr5D 93.966 116 6 1 2113 2227 287570755 287570640 1.290000e-39 174
20 TraesCS6D01G389400 chr5D 89.928 139 7 2 3044 3182 72874137 72874006 4.640000e-39 172
21 TraesCS6D01G389400 chr5D 79.216 255 30 8 499 746 321682463 321682225 4.680000e-34 156
22 TraesCS6D01G389400 chr5D 85.496 131 16 3 1 131 355210005 355210132 2.190000e-27 134
23 TraesCS6D01G389400 chr5B 88.617 817 77 14 912 1724 326613004 326612200 0.000000e+00 979
24 TraesCS6D01G389400 chr5B 95.000 160 8 0 1848 2007 326612110 326611951 5.800000e-63 252
25 TraesCS6D01G389400 chr5B 93.827 162 9 1 285 445 539322883 539322722 3.490000e-60 243
26 TraesCS6D01G389400 chr5B 93.077 130 5 4 2113 2241 326611867 326611741 1.660000e-43 187
27 TraesCS6D01G389400 chr5B 93.220 118 3 3 3073 3188 441672007 441671893 6.010000e-38 169
28 TraesCS6D01G389400 chr5B 91.129 124 7 2 3063 3185 566504188 566504308 7.770000e-37 165
29 TraesCS6D01G389400 chr5B 89.922 129 7 4 3059 3186 473290731 473290854 1.010000e-35 161
30 TraesCS6D01G389400 chr5B 85.156 128 14 4 4 131 676508793 676508915 3.670000e-25 126
31 TraesCS6D01G389400 chr5A 86.803 879 88 18 860 1729 379401701 379400842 0.000000e+00 955
32 TraesCS6D01G389400 chr5A 95.597 159 7 0 1848 2006 379400765 379400607 4.480000e-64 255
33 TraesCS6D01G389400 chr5A 93.252 163 10 1 284 445 17604076 17604238 4.520000e-59 239
34 TraesCS6D01G389400 chr5A 89.209 139 11 3 2113 2248 379400512 379400375 1.670000e-38 171
35 TraesCS6D01G389400 chr2D 85.753 365 35 12 1061 1423 519134794 519134445 1.530000e-98 370
36 TraesCS6D01G389400 chr2D 77.855 578 97 19 1173 1724 480325485 480324913 2.600000e-86 329
37 TraesCS6D01G389400 chr2D 92.593 162 11 1 285 445 56541156 56540995 7.560000e-57 231
38 TraesCS6D01G389400 chr2D 88.636 132 11 2 3051 3182 65564847 65564720 1.300000e-34 158
39 TraesCS6D01G389400 chr2D 84.000 125 16 4 10 134 574569569 574569449 2.210000e-22 117
40 TraesCS6D01G389400 chr1D 85.019 267 28 5 500 759 339905919 339906180 9.640000e-66 261
41 TraesCS6D01G389400 chr4B 93.293 164 10 1 285 447 483266540 483266377 1.260000e-59 241
42 TraesCS6D01G389400 chr4B 85.385 130 16 3 5 134 672132599 672132473 7.880000e-27 132
43 TraesCS6D01G389400 chr2B 92.727 165 11 1 283 446 546830165 546830329 1.620000e-58 237
44 TraesCS6D01G389400 chrUn 92.683 164 11 1 283 445 31220659 31220496 5.840000e-58 235
45 TraesCS6D01G389400 chr3B 90.503 179 14 3 271 447 748432595 748432772 2.100000e-57 233
46 TraesCS6D01G389400 chr7D 90.395 177 16 1 284 459 549295289 549295465 7.560000e-57 231
47 TraesCS6D01G389400 chr7D 91.736 121 6 2 3073 3192 227507121 227507238 7.770000e-37 165
48 TraesCS6D01G389400 chr7D 82.812 128 19 3 4 131 247322401 247322525 1.030000e-20 111
49 TraesCS6D01G389400 chr7A 91.129 124 8 1 3063 3186 501058873 501058993 7.770000e-37 165
50 TraesCS6D01G389400 chr3D 89.231 130 10 2 3064 3192 43587212 43587338 3.620000e-35 159
51 TraesCS6D01G389400 chr3D 86.992 123 12 4 10 132 358179460 358179342 6.090000e-28 135
52 TraesCS6D01G389400 chr1A 79.297 256 30 8 498 746 234658782 234658543 1.300000e-34 158
53 TraesCS6D01G389400 chr7B 86.047 129 14 3 1 129 289873156 289873280 6.090000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G389400 chr6D 464983426 464986925 3499 False 6464.000000 6464 100.000000 1 3500 1 chr6D.!!$F2 3499
1 TraesCS6D01G389400 chr6D 465010410 465012119 1709 True 714.666667 1707 94.852667 496 2224 3 chr6D.!!$R1 1728
2 TraesCS6D01G389400 chr6B 708988045 708991088 3043 False 1202.000000 3186 88.001333 159 3500 3 chr6B.!!$F2 3341
3 TraesCS6D01G389400 chr6B 709019627 709020831 1204 True 750.500000 1297 90.000500 941 2224 2 chr6B.!!$R2 1283
4 TraesCS6D01G389400 chr6A 611522074 611523234 1160 True 1428.000000 1428 88.880000 1041 2223 1 chr6A.!!$R1 1182
5 TraesCS6D01G389400 chr6A 611512688 611515711 3023 False 1026.333333 2658 85.914333 445 3496 3 chr6A.!!$F2 3051
6 TraesCS6D01G389400 chr5D 287570640 287571947 1307 True 468.333333 985 91.899667 860 2227 3 chr5D.!!$R3 1367
7 TraesCS6D01G389400 chr5B 326611741 326613004 1263 True 472.666667 979 92.231333 912 2241 3 chr5B.!!$R3 1329
8 TraesCS6D01G389400 chr5A 379400375 379401701 1326 True 460.333333 955 90.536333 860 2248 3 chr5A.!!$R1 1388
9 TraesCS6D01G389400 chr2D 480324913 480325485 572 True 329.000000 329 77.855000 1173 1724 1 chr2D.!!$R3 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
298 300 0.033306 ACCTCTACTCCCTCCGTTCC 60.033 60.000 0.00 0.0 0.00 3.62 F
299 301 0.259356 CCTCTACTCCCTCCGTTCCT 59.741 60.000 0.00 0.0 0.00 3.36 F
528 533 0.667792 GGTCGATGAAGGGATAGCGC 60.668 60.000 0.00 0.0 0.00 5.92 F
1063 1104 1.377994 CCAAGGCCAAGAGCTCAGT 59.622 57.895 17.77 0.0 43.05 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1480 1559 0.542467 TGTAGAACACGGCCCTGGTA 60.542 55.000 6.69 0.00 0.00 3.25 R
1790 1872 2.025321 AGTCTGTCCAAACCAAACACCT 60.025 45.455 0.00 0.00 0.00 4.00 R
2027 2150 2.094700 TCAAGCTTAACACGATCGAGCT 60.095 45.455 24.34 21.33 44.95 4.09 R
2884 3135 0.304705 GCGACAAGTTATGCGGATGG 59.695 55.000 0.00 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.815384 TTGCATCCGGATCCGTAGA 58.185 52.632 31.22 22.54 37.81 2.59
19 20 0.387929 TTGCATCCGGATCCGTAGAC 59.612 55.000 31.22 18.46 37.81 2.59
20 21 1.289380 GCATCCGGATCCGTAGACC 59.711 63.158 31.22 13.65 37.81 3.85
21 22 1.461091 GCATCCGGATCCGTAGACCA 61.461 60.000 31.22 9.23 37.81 4.02
22 23 0.314302 CATCCGGATCCGTAGACCAC 59.686 60.000 31.22 0.00 37.81 4.16
23 24 0.826672 ATCCGGATCCGTAGACCACC 60.827 60.000 31.22 0.00 37.81 4.61
24 25 1.455217 CCGGATCCGTAGACCACCT 60.455 63.158 31.22 0.00 37.81 4.00
25 26 0.179009 CCGGATCCGTAGACCACCTA 60.179 60.000 31.22 0.00 37.81 3.08
26 27 1.236628 CGGATCCGTAGACCACCTAG 58.763 60.000 26.35 0.00 34.35 3.02
27 28 0.960286 GGATCCGTAGACCACCTAGC 59.040 60.000 0.00 0.00 0.00 3.42
28 29 0.592148 GATCCGTAGACCACCTAGCG 59.408 60.000 0.00 0.00 0.00 4.26
29 30 0.182061 ATCCGTAGACCACCTAGCGA 59.818 55.000 0.00 0.00 0.00 4.93
30 31 0.182061 TCCGTAGACCACCTAGCGAT 59.818 55.000 0.00 0.00 0.00 4.58
31 32 0.311165 CCGTAGACCACCTAGCGATG 59.689 60.000 0.00 0.00 0.00 3.84
32 33 1.306148 CGTAGACCACCTAGCGATGA 58.694 55.000 0.00 0.00 0.00 2.92
33 34 1.002684 CGTAGACCACCTAGCGATGAC 60.003 57.143 0.00 0.00 0.00 3.06
34 35 2.299521 GTAGACCACCTAGCGATGACT 58.700 52.381 0.00 0.00 0.00 3.41
35 36 2.730934 AGACCACCTAGCGATGACTA 57.269 50.000 0.00 0.00 0.00 2.59
36 37 2.577700 AGACCACCTAGCGATGACTAG 58.422 52.381 0.00 0.00 39.54 2.57
37 38 2.172930 AGACCACCTAGCGATGACTAGA 59.827 50.000 0.00 0.00 41.92 2.43
38 39 2.950309 GACCACCTAGCGATGACTAGAA 59.050 50.000 0.00 0.00 41.92 2.10
39 40 2.952978 ACCACCTAGCGATGACTAGAAG 59.047 50.000 0.00 0.00 41.92 2.85
40 41 2.287909 CCACCTAGCGATGACTAGAAGC 60.288 54.545 0.00 0.00 41.92 3.86
41 42 2.359214 CACCTAGCGATGACTAGAAGCA 59.641 50.000 0.00 0.00 41.92 3.91
42 43 3.005261 CACCTAGCGATGACTAGAAGCAT 59.995 47.826 0.00 0.00 41.92 3.79
43 44 3.639094 ACCTAGCGATGACTAGAAGCATT 59.361 43.478 0.00 0.00 41.92 3.56
44 45 3.986572 CCTAGCGATGACTAGAAGCATTG 59.013 47.826 0.00 2.58 41.92 2.82
45 46 3.808466 AGCGATGACTAGAAGCATTGA 57.192 42.857 0.00 0.00 0.00 2.57
46 47 4.128925 AGCGATGACTAGAAGCATTGAA 57.871 40.909 0.00 0.00 0.00 2.69
47 48 4.118410 AGCGATGACTAGAAGCATTGAAG 58.882 43.478 0.00 0.00 0.00 3.02
48 49 3.303001 GCGATGACTAGAAGCATTGAAGC 60.303 47.826 0.00 0.00 0.00 3.86
49 50 3.060674 CGATGACTAGAAGCATTGAAGCG 60.061 47.826 0.00 0.00 40.15 4.68
50 51 3.592898 TGACTAGAAGCATTGAAGCGA 57.407 42.857 0.00 0.00 40.15 4.93
51 52 3.515630 TGACTAGAAGCATTGAAGCGAG 58.484 45.455 0.00 0.00 40.15 5.03
52 53 2.275318 ACTAGAAGCATTGAAGCGAGC 58.725 47.619 0.00 0.00 40.15 5.03
53 54 1.596727 CTAGAAGCATTGAAGCGAGCC 59.403 52.381 0.00 0.00 40.15 4.70
54 55 1.061570 GAAGCATTGAAGCGAGCCG 59.938 57.895 0.00 0.00 40.15 5.52
55 56 1.361668 GAAGCATTGAAGCGAGCCGA 61.362 55.000 0.00 0.00 40.15 5.54
56 57 0.955428 AAGCATTGAAGCGAGCCGAA 60.955 50.000 0.00 0.00 40.15 4.30
57 58 1.061570 GCATTGAAGCGAGCCGAAG 59.938 57.895 0.00 0.00 0.00 3.79
58 59 1.361668 GCATTGAAGCGAGCCGAAGA 61.362 55.000 0.00 0.00 0.00 2.87
59 60 0.371645 CATTGAAGCGAGCCGAAGAC 59.628 55.000 0.00 0.00 0.00 3.01
60 61 1.078759 ATTGAAGCGAGCCGAAGACG 61.079 55.000 0.00 0.00 39.43 4.18
72 73 4.838152 AAGACGCGCCGCCATCAT 62.838 61.111 5.73 0.00 0.00 2.45
73 74 4.838152 AGACGCGCCGCCATCATT 62.838 61.111 5.73 0.00 0.00 2.57
74 75 4.596180 GACGCGCCGCCATCATTG 62.596 66.667 5.73 0.00 0.00 2.82
77 78 4.918129 GCGCCGCCATCATTGCTG 62.918 66.667 0.00 0.00 0.00 4.41
78 79 4.918129 CGCCGCCATCATTGCTGC 62.918 66.667 0.00 0.00 35.86 5.25
79 80 3.524606 GCCGCCATCATTGCTGCT 61.525 61.111 0.00 0.00 36.23 4.24
80 81 2.719979 CCGCCATCATTGCTGCTC 59.280 61.111 0.00 0.00 0.00 4.26
81 82 1.822613 CCGCCATCATTGCTGCTCT 60.823 57.895 0.00 0.00 0.00 4.09
82 83 1.647629 CGCCATCATTGCTGCTCTC 59.352 57.895 0.00 0.00 0.00 3.20
83 84 1.783031 CGCCATCATTGCTGCTCTCC 61.783 60.000 0.00 0.00 0.00 3.71
84 85 1.453762 GCCATCATTGCTGCTCTCCC 61.454 60.000 0.00 0.00 0.00 4.30
85 86 0.183014 CCATCATTGCTGCTCTCCCT 59.817 55.000 0.00 0.00 0.00 4.20
86 87 1.595466 CATCATTGCTGCTCTCCCTC 58.405 55.000 0.00 0.00 0.00 4.30
87 88 0.106335 ATCATTGCTGCTCTCCCTCG 59.894 55.000 0.00 0.00 0.00 4.63
88 89 2.178890 CATTGCTGCTCTCCCTCGC 61.179 63.158 0.00 0.00 0.00 5.03
89 90 3.397613 ATTGCTGCTCTCCCTCGCC 62.398 63.158 0.00 0.00 0.00 5.54
106 107 2.032071 CGGAGGCCGGACAAAACT 59.968 61.111 11.69 0.00 44.15 2.66
107 108 1.599797 CGGAGGCCGGACAAAACTT 60.600 57.895 11.69 0.00 44.15 2.66
108 109 1.852067 CGGAGGCCGGACAAAACTTG 61.852 60.000 11.69 0.00 44.15 3.16
110 111 1.029681 GAGGCCGGACAAAACTTGTT 58.970 50.000 11.69 0.00 45.52 2.83
111 112 2.223745 GAGGCCGGACAAAACTTGTTA 58.776 47.619 11.69 0.00 45.52 2.41
112 113 2.817844 GAGGCCGGACAAAACTTGTTAT 59.182 45.455 11.69 0.00 45.52 1.89
113 114 4.004982 GAGGCCGGACAAAACTTGTTATA 58.995 43.478 11.69 0.00 45.52 0.98
114 115 4.007659 AGGCCGGACAAAACTTGTTATAG 58.992 43.478 11.69 0.00 45.52 1.31
115 116 3.754850 GGCCGGACAAAACTTGTTATAGT 59.245 43.478 5.05 0.00 45.52 2.12
116 117 4.937015 GGCCGGACAAAACTTGTTATAGTA 59.063 41.667 5.05 0.00 45.52 1.82
117 118 5.064325 GGCCGGACAAAACTTGTTATAGTAG 59.936 44.000 5.05 0.00 45.52 2.57
118 119 5.870978 GCCGGACAAAACTTGTTATAGTAGA 59.129 40.000 5.05 0.00 45.52 2.59
119 120 6.183360 GCCGGACAAAACTTGTTATAGTAGAC 60.183 42.308 5.05 0.00 45.52 2.59
120 121 6.869913 CCGGACAAAACTTGTTATAGTAGACA 59.130 38.462 0.00 0.00 45.52 3.41
121 122 7.385752 CCGGACAAAACTTGTTATAGTAGACAA 59.614 37.037 0.00 2.90 45.52 3.18
122 123 8.932791 CGGACAAAACTTGTTATAGTAGACAAT 58.067 33.333 3.23 0.00 45.52 2.71
129 130 9.877178 AACTTGTTATAGTAGACAATCTGGAAG 57.123 33.333 3.23 0.00 35.44 3.46
130 131 9.036980 ACTTGTTATAGTAGACAATCTGGAAGT 57.963 33.333 3.23 0.00 35.44 3.01
131 132 9.877178 CTTGTTATAGTAGACAATCTGGAAGTT 57.123 33.333 3.23 0.00 35.44 2.66
132 133 9.653287 TTGTTATAGTAGACAATCTGGAAGTTG 57.347 33.333 0.00 0.00 31.30 3.16
133 134 8.812972 TGTTATAGTAGACAATCTGGAAGTTGT 58.187 33.333 0.00 0.00 39.62 3.32
134 135 9.654663 GTTATAGTAGACAATCTGGAAGTTGTT 57.345 33.333 0.00 0.00 37.97 2.83
137 138 7.540474 AGTAGACAATCTGGAAGTTGTTAGA 57.460 36.000 0.00 0.00 37.97 2.10
138 139 7.379750 AGTAGACAATCTGGAAGTTGTTAGAC 58.620 38.462 0.00 0.00 37.97 2.59
139 140 6.174720 AGACAATCTGGAAGTTGTTAGACA 57.825 37.500 0.00 0.00 37.97 3.41
140 141 5.992217 AGACAATCTGGAAGTTGTTAGACAC 59.008 40.000 0.00 0.00 37.97 3.67
141 142 4.750098 ACAATCTGGAAGTTGTTAGACACG 59.250 41.667 0.00 0.00 35.63 4.49
142 143 3.380479 TCTGGAAGTTGTTAGACACGG 57.620 47.619 0.00 0.00 33.76 4.94
143 144 2.960384 TCTGGAAGTTGTTAGACACGGA 59.040 45.455 0.00 0.00 33.76 4.69
144 145 3.057734 CTGGAAGTTGTTAGACACGGAC 58.942 50.000 0.00 0.00 0.00 4.79
145 146 2.431419 TGGAAGTTGTTAGACACGGACA 59.569 45.455 0.00 0.00 0.00 4.02
146 147 3.070446 TGGAAGTTGTTAGACACGGACAT 59.930 43.478 0.00 0.00 0.00 3.06
147 148 3.432252 GGAAGTTGTTAGACACGGACATG 59.568 47.826 0.00 0.00 0.00 3.21
148 149 3.040147 AGTTGTTAGACACGGACATGG 57.960 47.619 0.00 0.00 0.00 3.66
149 150 2.367567 AGTTGTTAGACACGGACATGGT 59.632 45.455 0.00 0.00 0.00 3.55
150 151 2.448926 TGTTAGACACGGACATGGTG 57.551 50.000 0.00 0.00 41.15 4.17
151 152 1.001520 TGTTAGACACGGACATGGTGG 59.998 52.381 0.00 0.00 39.69 4.61
152 153 1.274167 GTTAGACACGGACATGGTGGA 59.726 52.381 0.00 0.00 39.69 4.02
153 154 1.860641 TAGACACGGACATGGTGGAT 58.139 50.000 0.00 0.00 39.69 3.41
154 155 0.984230 AGACACGGACATGGTGGATT 59.016 50.000 0.00 0.00 39.69 3.01
155 156 1.086696 GACACGGACATGGTGGATTG 58.913 55.000 0.00 0.00 39.69 2.67
156 157 0.400213 ACACGGACATGGTGGATTGT 59.600 50.000 0.00 0.00 39.69 2.71
157 158 1.626321 ACACGGACATGGTGGATTGTA 59.374 47.619 0.00 0.00 39.69 2.41
163 164 5.063204 CGGACATGGTGGATTGTATACATT 58.937 41.667 6.36 2.87 0.00 2.71
172 173 6.347725 GGTGGATTGTATACATTCGATTGAGC 60.348 42.308 17.30 6.41 0.00 4.26
177 178 9.502145 GATTGTATACATTCGATTGAGCAAAAA 57.498 29.630 13.92 2.50 0.00 1.94
178 179 8.894409 TTGTATACATTCGATTGAGCAAAAAG 57.106 30.769 13.92 0.00 0.00 2.27
179 180 6.966632 TGTATACATTCGATTGAGCAAAAAGC 59.033 34.615 13.92 0.00 46.19 3.51
197 198 9.455847 GCAAAAAGCTAGACCATATTATCTTTG 57.544 33.333 0.00 0.00 41.15 2.77
203 205 8.709308 AGCTAGACCATATTATCTTTGTGAACT 58.291 33.333 0.00 0.00 0.00 3.01
204 206 9.982651 GCTAGACCATATTATCTTTGTGAACTA 57.017 33.333 0.00 0.00 0.00 2.24
267 269 9.237846 GAAATAAACACTAGCTTATTTCATGGC 57.762 33.333 23.97 10.05 44.49 4.40
277 279 9.182214 CTAGCTTATTTCATGGCCATACATATT 57.818 33.333 20.30 4.15 0.00 1.28
279 281 9.532494 AGCTTATTTCATGGCCATACATATTAA 57.468 29.630 20.30 10.67 0.00 1.40
280 282 9.573133 GCTTATTTCATGGCCATACATATTAAC 57.427 33.333 20.30 0.34 0.00 2.01
282 284 9.821240 TTATTTCATGGCCATACATATTAACCT 57.179 29.630 20.30 0.00 0.00 3.50
283 285 7.759489 TTTCATGGCCATACATATTAACCTC 57.241 36.000 20.30 0.00 0.00 3.85
286 288 7.620880 TCATGGCCATACATATTAACCTCTAC 58.379 38.462 20.30 0.00 0.00 2.59
288 290 7.241042 TGGCCATACATATTAACCTCTACTC 57.759 40.000 0.00 0.00 0.00 2.59
289 291 6.212791 TGGCCATACATATTAACCTCTACTCC 59.787 42.308 0.00 0.00 0.00 3.85
290 292 6.351966 GGCCATACATATTAACCTCTACTCCC 60.352 46.154 0.00 0.00 0.00 4.30
291 293 6.440965 GCCATACATATTAACCTCTACTCCCT 59.559 42.308 0.00 0.00 0.00 4.20
292 294 7.363968 GCCATACATATTAACCTCTACTCCCTC 60.364 44.444 0.00 0.00 0.00 4.30
293 295 7.124448 CCATACATATTAACCTCTACTCCCTCC 59.876 44.444 0.00 0.00 0.00 4.30
294 296 5.078256 ACATATTAACCTCTACTCCCTCCG 58.922 45.833 0.00 0.00 0.00 4.63
295 297 3.684408 ATTAACCTCTACTCCCTCCGT 57.316 47.619 0.00 0.00 0.00 4.69
296 298 3.463048 TTAACCTCTACTCCCTCCGTT 57.537 47.619 0.00 0.00 0.00 4.44
297 299 1.849977 AACCTCTACTCCCTCCGTTC 58.150 55.000 0.00 0.00 0.00 3.95
298 300 0.033306 ACCTCTACTCCCTCCGTTCC 60.033 60.000 0.00 0.00 0.00 3.62
299 301 0.259356 CCTCTACTCCCTCCGTTCCT 59.741 60.000 0.00 0.00 0.00 3.36
300 302 1.493871 CCTCTACTCCCTCCGTTCCTA 59.506 57.143 0.00 0.00 0.00 2.94
301 303 2.091994 CCTCTACTCCCTCCGTTCCTAA 60.092 54.545 0.00 0.00 0.00 2.69
302 304 3.626729 CCTCTACTCCCTCCGTTCCTAAA 60.627 52.174 0.00 0.00 0.00 1.85
303 305 4.216708 CTCTACTCCCTCCGTTCCTAAAT 58.783 47.826 0.00 0.00 0.00 1.40
304 306 5.383476 CTCTACTCCCTCCGTTCCTAAATA 58.617 45.833 0.00 0.00 0.00 1.40
305 307 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
306 308 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
307 309 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
308 310 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
309 311 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
310 312 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
311 313 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
312 314 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
313 315 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
314 316 8.645110 CCCTCCGTTCCTAAATATAAGTCTTTA 58.355 37.037 0.00 0.00 0.00 1.85
342 344 8.324306 ATAGATTTCACTATGGACCACATATGG 58.676 37.037 7.80 0.00 41.07 2.74
359 361 8.502105 CACATATGGATGTATGTAGATGCATT 57.498 34.615 7.80 0.00 44.82 3.56
360 362 8.953313 CACATATGGATGTATGTAGATGCATTT 58.047 33.333 7.80 0.00 44.82 2.32
365 367 7.966812 TGGATGTATGTAGATGCATTTAGAGT 58.033 34.615 0.00 0.00 35.26 3.24
366 368 7.874528 TGGATGTATGTAGATGCATTTAGAGTG 59.125 37.037 0.00 0.00 35.26 3.51
367 369 7.875041 GGATGTATGTAGATGCATTTAGAGTGT 59.125 37.037 0.00 0.00 35.26 3.55
368 370 9.914131 GATGTATGTAGATGCATTTAGAGTGTA 57.086 33.333 0.00 0.00 35.26 2.90
369 371 9.920133 ATGTATGTAGATGCATTTAGAGTGTAG 57.080 33.333 0.00 0.00 31.37 2.74
370 372 9.131791 TGTATGTAGATGCATTTAGAGTGTAGA 57.868 33.333 0.00 0.00 0.00 2.59
373 375 9.703892 ATGTAGATGCATTTAGAGTGTAGATTC 57.296 33.333 0.00 0.00 0.00 2.52
374 376 8.695456 TGTAGATGCATTTAGAGTGTAGATTCA 58.305 33.333 0.00 0.00 0.00 2.57
375 377 8.973378 GTAGATGCATTTAGAGTGTAGATTCAC 58.027 37.037 0.00 0.00 38.46 3.18
387 389 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
388 390 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
389 391 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
390 392 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
391 393 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
392 394 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
393 395 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
394 396 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
395 397 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
396 398 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
397 399 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
398 400 5.581085 ACTCATTTTGCTTCGTATGTAGTCC 59.419 40.000 0.00 0.00 0.00 3.85
399 401 5.483811 TCATTTTGCTTCGTATGTAGTCCA 58.516 37.500 0.00 0.00 0.00 4.02
400 402 6.112734 TCATTTTGCTTCGTATGTAGTCCAT 58.887 36.000 0.00 0.00 37.58 3.41
401 403 7.269316 TCATTTTGCTTCGTATGTAGTCCATA 58.731 34.615 0.00 0.00 34.86 2.74
402 404 7.766738 TCATTTTGCTTCGTATGTAGTCCATAA 59.233 33.333 0.00 0.00 37.77 1.90
403 405 8.559536 CATTTTGCTTCGTATGTAGTCCATAAT 58.440 33.333 0.00 0.00 37.77 1.28
404 406 7.477144 TTTGCTTCGTATGTAGTCCATAATG 57.523 36.000 0.00 0.00 37.77 1.90
405 407 6.399639 TGCTTCGTATGTAGTCCATAATGA 57.600 37.500 0.00 0.00 37.77 2.57
406 408 6.811954 TGCTTCGTATGTAGTCCATAATGAA 58.188 36.000 0.00 0.00 37.77 2.57
407 409 7.269316 TGCTTCGTATGTAGTCCATAATGAAA 58.731 34.615 0.00 0.00 37.77 2.69
408 410 7.931407 TGCTTCGTATGTAGTCCATAATGAAAT 59.069 33.333 0.00 0.00 37.77 2.17
409 411 8.436200 GCTTCGTATGTAGTCCATAATGAAATC 58.564 37.037 0.00 0.00 37.77 2.17
410 412 9.698309 CTTCGTATGTAGTCCATAATGAAATCT 57.302 33.333 0.00 0.00 37.77 2.40
411 413 9.692749 TTCGTATGTAGTCCATAATGAAATCTC 57.307 33.333 0.00 0.00 37.77 2.75
412 414 9.078990 TCGTATGTAGTCCATAATGAAATCTCT 57.921 33.333 0.00 0.00 37.77 3.10
420 422 9.606631 AGTCCATAATGAAATCTCTACAAAGAC 57.393 33.333 0.00 0.00 0.00 3.01
421 423 9.606631 GTCCATAATGAAATCTCTACAAAGACT 57.393 33.333 0.00 0.00 0.00 3.24
458 460 9.679661 AACCAAGGAAGTATTGTTTTGATTTTT 57.320 25.926 0.00 0.00 0.00 1.94
459 461 9.325198 ACCAAGGAAGTATTGTTTTGATTTTTC 57.675 29.630 0.00 0.00 0.00 2.29
460 462 8.487176 CCAAGGAAGTATTGTTTTGATTTTTCG 58.513 33.333 0.00 0.00 0.00 3.46
461 463 9.030301 CAAGGAAGTATTGTTTTGATTTTTCGT 57.970 29.630 0.00 0.00 0.00 3.85
464 466 9.244799 GGAAGTATTGTTTTGATTTTTCGTCTT 57.755 29.630 0.00 0.00 0.00 3.01
511 513 1.949525 GCGTGGCTATGATTGATTGGT 59.050 47.619 0.00 0.00 0.00 3.67
526 531 2.910688 TTGGTCGATGAAGGGATAGC 57.089 50.000 0.00 0.00 0.00 2.97
528 533 0.667792 GGTCGATGAAGGGATAGCGC 60.668 60.000 0.00 0.00 0.00 5.92
645 650 3.745797 GCTCTCTTTCGGCCCTCATAATT 60.746 47.826 0.00 0.00 0.00 1.40
655 660 4.399303 CGGCCCTCATAATTCAAAAACTCT 59.601 41.667 0.00 0.00 0.00 3.24
656 661 5.588648 CGGCCCTCATAATTCAAAAACTCTA 59.411 40.000 0.00 0.00 0.00 2.43
657 662 6.458342 CGGCCCTCATAATTCAAAAACTCTAC 60.458 42.308 0.00 0.00 0.00 2.59
658 663 6.603599 GGCCCTCATAATTCAAAAACTCTACT 59.396 38.462 0.00 0.00 0.00 2.57
887 904 3.076621 CACTAATCAAGAAGTGGCAGCA 58.923 45.455 0.00 0.00 39.55 4.41
990 1014 4.429854 AAGAAGCTCTCCAAAGACACTT 57.570 40.909 0.00 0.00 0.00 3.16
1063 1104 1.377994 CCAAGGCCAAGAGCTCAGT 59.622 57.895 17.77 0.00 43.05 3.41
1742 1824 7.255520 CCGTAAGTGCTCCTGTAGAATAATAGT 60.256 40.741 0.00 0.00 0.00 2.12
1743 1825 8.136165 CGTAAGTGCTCCTGTAGAATAATAGTT 58.864 37.037 0.00 0.00 0.00 2.24
1746 1828 8.534954 AGTGCTCCTGTAGAATAATAGTTACA 57.465 34.615 0.00 0.00 0.00 2.41
1748 1830 8.630917 GTGCTCCTGTAGAATAATAGTTACAGA 58.369 37.037 11.03 0.00 43.47 3.41
1749 1831 8.630917 TGCTCCTGTAGAATAATAGTTACAGAC 58.369 37.037 11.03 2.99 43.47 3.51
1807 1889 2.290464 CGTAGGTGTTTGGTTTGGACA 58.710 47.619 0.00 0.00 0.00 4.02
1812 1894 2.357952 GGTGTTTGGTTTGGACAGACTC 59.642 50.000 0.00 0.00 0.00 3.36
1826 1928 3.993081 GACAGACTCATGAGGTGAAACTG 59.007 47.826 26.08 22.15 41.56 3.16
1829 1931 5.221803 ACAGACTCATGAGGTGAAACTGATT 60.222 40.000 26.08 0.56 39.90 2.57
2025 2148 3.054434 TCAACACCCTCCACCATCATTAG 60.054 47.826 0.00 0.00 0.00 1.73
2026 2149 2.562296 ACACCCTCCACCATCATTAGT 58.438 47.619 0.00 0.00 0.00 2.24
2027 2150 3.731431 ACACCCTCCACCATCATTAGTA 58.269 45.455 0.00 0.00 0.00 1.82
2069 2255 5.237815 TGATGATGATTATGGTTACGAGCC 58.762 41.667 0.00 0.00 0.00 4.70
2073 2259 0.386476 ATTATGGTTACGAGCCGCGA 59.614 50.000 8.23 0.00 44.57 5.87
2074 2260 0.526096 TTATGGTTACGAGCCGCGAC 60.526 55.000 8.23 0.00 44.57 5.19
2075 2261 2.340453 TATGGTTACGAGCCGCGACC 62.340 60.000 8.23 5.68 44.57 4.79
2097 2283 4.979197 CCAGCTTACTAATCTCATCGACAC 59.021 45.833 0.00 0.00 0.00 3.67
2098 2284 5.450550 CCAGCTTACTAATCTCATCGACACA 60.451 44.000 0.00 0.00 0.00 3.72
2233 2430 0.948623 CACCAATCAACCAGTCGCGA 60.949 55.000 3.71 3.71 0.00 5.87
2298 2495 2.123939 TGGTGGTGGTGGTTGCTG 60.124 61.111 0.00 0.00 0.00 4.41
2373 2570 1.218316 CTACCGTGCTGTTCCTCCC 59.782 63.158 0.00 0.00 0.00 4.30
2453 2685 4.112634 TCCCTTCCTTTTGTATTGCACT 57.887 40.909 0.00 0.00 0.00 4.40
2454 2686 5.249780 TCCCTTCCTTTTGTATTGCACTA 57.750 39.130 0.00 0.00 0.00 2.74
2455 2687 5.007682 TCCCTTCCTTTTGTATTGCACTAC 58.992 41.667 7.25 7.25 0.00 2.73
2456 2688 4.142687 CCCTTCCTTTTGTATTGCACTACG 60.143 45.833 9.39 0.00 0.00 3.51
2457 2689 4.403453 CTTCCTTTTGTATTGCACTACGC 58.597 43.478 9.39 0.00 42.89 4.42
2470 2702 2.875633 CACTACGCACGCGATTTAATC 58.124 47.619 19.66 0.00 42.83 1.75
2483 2715 4.003519 GATTTAATCGGGCGTGCATATC 57.996 45.455 0.00 0.00 0.00 1.63
2568 2800 7.284261 TCTCGCCTGGAGATGAGAATAATATAG 59.716 40.741 0.00 0.00 46.80 1.31
2604 2853 4.367386 TCGTCCTATTTTCCTCTTCGAC 57.633 45.455 0.00 0.00 0.00 4.20
2682 2931 3.888930 TCATCTCTTTGGTGGTGGTTTTC 59.111 43.478 0.00 0.00 0.00 2.29
2694 2943 2.291465 GGTGGTTTTCGTGGAGTTAACC 59.709 50.000 0.88 0.00 38.92 2.85
2706 2955 2.671888 GGAGTTAACCTTTCGTGCTAGC 59.328 50.000 8.10 8.10 0.00 3.42
2707 2956 3.586892 GAGTTAACCTTTCGTGCTAGCT 58.413 45.455 17.23 0.00 0.00 3.32
2708 2957 4.381292 GGAGTTAACCTTTCGTGCTAGCTA 60.381 45.833 17.23 0.00 0.00 3.32
2709 2958 4.745649 AGTTAACCTTTCGTGCTAGCTAG 58.254 43.478 16.84 16.84 0.00 3.42
2809 3060 5.034878 TGGCCTCTCCATCATGTGATATAT 58.965 41.667 3.32 0.00 40.72 0.86
2816 3067 8.884124 TCTCCATCATGTGATATATACAGTCA 57.116 34.615 0.00 0.00 32.63 3.41
2817 3068 9.484806 TCTCCATCATGTGATATATACAGTCAT 57.515 33.333 0.00 0.00 32.63 3.06
2857 3108 4.542697 AGTACCAAAAGGAACACAACCAT 58.457 39.130 0.00 0.00 0.00 3.55
2882 3133 4.938832 CCGGTTGGTATCAAGATTACACAA 59.061 41.667 0.00 0.00 32.92 3.33
2884 3135 6.190954 GGTTGGTATCAAGATTACACAACC 57.809 41.667 15.39 15.39 46.41 3.77
2890 3141 3.605634 TCAAGATTACACAACCCATCCG 58.394 45.455 0.00 0.00 0.00 4.18
2896 3147 1.459450 ACACAACCCATCCGCATAAC 58.541 50.000 0.00 0.00 0.00 1.89
2897 3148 1.004277 ACACAACCCATCCGCATAACT 59.996 47.619 0.00 0.00 0.00 2.24
2901 3152 2.038387 ACCCATCCGCATAACTTGTC 57.962 50.000 0.00 0.00 0.00 3.18
2902 3153 0.937304 CCCATCCGCATAACTTGTCG 59.063 55.000 0.00 0.00 0.00 4.35
2914 3277 2.661537 TTGTCGCTGACACGCCAG 60.662 61.111 10.26 0.00 42.60 4.85
2947 3310 5.021033 TGAACAATGCAACCAATTTCAGT 57.979 34.783 0.00 0.00 0.00 3.41
2949 3312 3.641648 ACAATGCAACCAATTTCAGTCG 58.358 40.909 0.00 0.00 0.00 4.18
2950 3313 2.988493 CAATGCAACCAATTTCAGTCGG 59.012 45.455 0.00 0.00 0.00 4.79
2951 3314 0.313672 TGCAACCAATTTCAGTCGGC 59.686 50.000 0.00 0.00 0.00 5.54
2952 3315 0.388520 GCAACCAATTTCAGTCGGCC 60.389 55.000 0.00 0.00 0.00 6.13
2993 3356 1.859427 CTGCGTGTTTGCATCCTGCT 61.859 55.000 0.34 0.00 45.31 4.24
3003 3366 0.866427 GCATCCTGCTGTGATGATCG 59.134 55.000 19.18 0.00 41.72 3.69
3004 3367 1.539712 GCATCCTGCTGTGATGATCGA 60.540 52.381 19.18 0.00 41.72 3.59
3009 3372 1.785430 CTGCTGTGATGATCGATGACG 59.215 52.381 0.54 0.00 41.26 4.35
3026 3389 7.039270 TCGATGACGAATCTTGGAAGAAAATA 58.961 34.615 0.00 0.00 45.74 1.40
3033 3396 6.969473 CGAATCTTGGAAGAAAATAAAGGAGC 59.031 38.462 0.00 0.00 38.77 4.70
3034 3397 7.148171 CGAATCTTGGAAGAAAATAAAGGAGCT 60.148 37.037 0.00 0.00 38.77 4.09
3050 3413 3.375299 AGGAGCTTCAATGTTAATCGTGC 59.625 43.478 0.00 0.00 0.00 5.34
3064 3427 1.234821 TCGTGCGAAGAAAAAGCCAT 58.765 45.000 0.00 0.00 0.00 4.40
3073 3436 6.205853 TGCGAAGAAAAAGCCATAAACTCTTA 59.794 34.615 0.00 0.00 0.00 2.10
3074 3437 6.523546 GCGAAGAAAAAGCCATAAACTCTTAC 59.476 38.462 0.00 0.00 0.00 2.34
3076 3439 7.958025 CGAAGAAAAAGCCATAAACTCTTACTC 59.042 37.037 0.00 0.00 0.00 2.59
3078 3441 6.659668 AGAAAAAGCCATAAACTCTTACTCCC 59.340 38.462 0.00 0.00 0.00 4.30
3079 3442 5.780958 AAAGCCATAAACTCTTACTCCCT 57.219 39.130 0.00 0.00 0.00 4.20
3080 3443 5.360649 AAGCCATAAACTCTTACTCCCTC 57.639 43.478 0.00 0.00 0.00 4.30
3081 3444 3.712218 AGCCATAAACTCTTACTCCCTCC 59.288 47.826 0.00 0.00 0.00 4.30
3082 3445 3.454812 GCCATAAACTCTTACTCCCTCCA 59.545 47.826 0.00 0.00 0.00 3.86
3083 3446 4.103311 GCCATAAACTCTTACTCCCTCCAT 59.897 45.833 0.00 0.00 0.00 3.41
3084 3447 5.398012 GCCATAAACTCTTACTCCCTCCATT 60.398 44.000 0.00 0.00 0.00 3.16
3085 3448 6.292150 CCATAAACTCTTACTCCCTCCATTC 58.708 44.000 0.00 0.00 0.00 2.67
3086 3449 4.473477 AAACTCTTACTCCCTCCATTCG 57.527 45.455 0.00 0.00 0.00 3.34
3087 3450 2.389715 ACTCTTACTCCCTCCATTCGG 58.610 52.381 0.00 0.00 0.00 4.30
3088 3451 2.024273 ACTCTTACTCCCTCCATTCGGA 60.024 50.000 0.00 0.00 39.79 4.55
3089 3452 3.031736 CTCTTACTCCCTCCATTCGGAA 58.968 50.000 0.00 0.00 42.21 4.30
3090 3453 3.643792 CTCTTACTCCCTCCATTCGGAAT 59.356 47.826 0.00 0.00 42.21 3.01
3091 3454 4.037927 TCTTACTCCCTCCATTCGGAATT 58.962 43.478 0.00 0.00 42.21 2.17
3092 3455 5.213519 TCTTACTCCCTCCATTCGGAATTA 58.786 41.667 0.00 0.00 42.21 1.40
3093 3456 5.844516 TCTTACTCCCTCCATTCGGAATTAT 59.155 40.000 0.00 0.00 42.21 1.28
3094 3457 6.329197 TCTTACTCCCTCCATTCGGAATTATT 59.671 38.462 0.00 0.00 42.21 1.40
3095 3458 5.388599 ACTCCCTCCATTCGGAATTATTT 57.611 39.130 0.00 0.00 42.21 1.40
3096 3459 5.133221 ACTCCCTCCATTCGGAATTATTTG 58.867 41.667 0.00 0.00 42.21 2.32
3097 3460 5.124036 TCCCTCCATTCGGAATTATTTGT 57.876 39.130 0.00 0.00 42.21 2.83
3098 3461 5.130350 TCCCTCCATTCGGAATTATTTGTC 58.870 41.667 0.00 0.00 42.21 3.18
3099 3462 5.104109 TCCCTCCATTCGGAATTATTTGTCT 60.104 40.000 0.00 0.00 42.21 3.41
3100 3463 5.239525 CCCTCCATTCGGAATTATTTGTCTC 59.760 44.000 0.00 0.00 42.21 3.36
3101 3464 5.050091 CCTCCATTCGGAATTATTTGTCTCG 60.050 44.000 0.00 0.00 42.21 4.04
3102 3465 4.814234 TCCATTCGGAATTATTTGTCTCGG 59.186 41.667 0.00 0.00 38.83 4.63
3103 3466 4.814234 CCATTCGGAATTATTTGTCTCGGA 59.186 41.667 0.00 0.00 0.00 4.55
3104 3467 5.295787 CCATTCGGAATTATTTGTCTCGGAA 59.704 40.000 0.00 0.00 33.44 4.30
3105 3468 6.183360 CCATTCGGAATTATTTGTCTCGGAAA 60.183 38.462 0.00 0.00 32.89 3.13
3106 3469 6.995511 TTCGGAATTATTTGTCTCGGAAAT 57.004 33.333 0.00 0.00 0.00 2.17
3107 3470 6.358118 TCGGAATTATTTGTCTCGGAAATG 57.642 37.500 0.00 0.00 0.00 2.32
3108 3471 6.110033 TCGGAATTATTTGTCTCGGAAATGA 58.890 36.000 0.00 0.00 0.00 2.57
3109 3472 6.596106 TCGGAATTATTTGTCTCGGAAATGAA 59.404 34.615 0.00 0.00 0.00 2.57
3110 3473 7.282224 TCGGAATTATTTGTCTCGGAAATGAAT 59.718 33.333 0.00 0.00 0.00 2.57
3111 3474 7.376866 CGGAATTATTTGTCTCGGAAATGAATG 59.623 37.037 0.00 0.00 0.00 2.67
3112 3475 8.190784 GGAATTATTTGTCTCGGAAATGAATGT 58.809 33.333 0.00 0.00 0.00 2.71
3116 3479 9.613428 TTATTTGTCTCGGAAATGAATGTATCT 57.387 29.630 0.00 0.00 0.00 1.98
3118 3481 8.648557 TTTGTCTCGGAAATGAATGTATCTAG 57.351 34.615 0.00 0.00 0.00 2.43
3119 3482 7.582667 TGTCTCGGAAATGAATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
3120 3483 8.007405 TGTCTCGGAAATGAATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
3121 3484 7.921214 TGTCTCGGAAATGAATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
3122 3485 8.138712 GTCTCGGAAATGAATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
3123 3486 9.350951 TCTCGGAAATGAATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
3124 3487 9.967346 CTCGGAAATGAATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
3154 3517 7.877097 ACATCTTCTAGATACATCCATTTCTGC 59.123 37.037 0.00 0.00 32.12 4.26
3155 3518 6.450545 TCTTCTAGATACATCCATTTCTGCG 58.549 40.000 0.00 0.00 0.00 5.18
3156 3519 6.265422 TCTTCTAGATACATCCATTTCTGCGA 59.735 38.462 0.00 0.00 0.00 5.10
3157 3520 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
3158 3521 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
3159 3522 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
3160 3523 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
3161 3524 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
3162 3525 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
3163 3526 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
3164 3527 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
3165 3528 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
3166 3529 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
3167 3530 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
3168 3531 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
3169 3532 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
3170 3533 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
3171 3534 3.857052 TCTGCGACAAGTAATTCCGAAT 58.143 40.909 0.00 0.00 0.00 3.34
3172 3535 3.616821 TCTGCGACAAGTAATTCCGAATG 59.383 43.478 0.00 0.00 0.00 2.67
3173 3536 2.675844 TGCGACAAGTAATTCCGAATGG 59.324 45.455 0.00 0.00 0.00 3.16
3174 3537 2.933906 GCGACAAGTAATTCCGAATGGA 59.066 45.455 0.00 0.00 44.61 3.41
3187 3550 3.055385 TCCGAATGGAGGGAGTAGTTTTG 60.055 47.826 0.00 0.00 40.17 2.44
3192 3555 4.351874 TGGAGGGAGTAGTTTTGAGTTG 57.648 45.455 0.00 0.00 0.00 3.16
3232 3595 2.596904 TACGAAGCTGGGCTGAATAC 57.403 50.000 0.00 0.00 39.62 1.89
3236 3599 2.488952 GAAGCTGGGCTGAATACTAGC 58.511 52.381 0.00 0.00 39.62 3.42
3238 3601 1.415659 AGCTGGGCTGAATACTAGCAG 59.584 52.381 0.00 0.00 42.88 4.24
3243 3606 4.261801 TGGGCTGAATACTAGCAGTTTTC 58.738 43.478 0.00 10.35 42.88 2.29
3246 3609 5.416013 GGGCTGAATACTAGCAGTTTTCTTT 59.584 40.000 15.04 0.00 42.88 2.52
3247 3610 6.071896 GGGCTGAATACTAGCAGTTTTCTTTT 60.072 38.462 15.04 0.00 42.88 2.27
3249 3612 7.024171 GCTGAATACTAGCAGTTTTCTTTTCC 58.976 38.462 15.04 0.00 37.17 3.13
3251 3614 8.458573 TGAATACTAGCAGTTTTCTTTTCCAA 57.541 30.769 15.04 0.00 37.17 3.53
3255 3618 9.914131 ATACTAGCAGTTTTCTTTTCCAATTTC 57.086 29.630 0.00 0.00 0.00 2.17
3256 3619 8.011844 ACTAGCAGTTTTCTTTTCCAATTTCT 57.988 30.769 0.00 0.00 0.00 2.52
3257 3620 8.478066 ACTAGCAGTTTTCTTTTCCAATTTCTT 58.522 29.630 0.00 0.00 0.00 2.52
3258 3621 7.776933 AGCAGTTTTCTTTTCCAATTTCTTC 57.223 32.000 0.00 0.00 0.00 2.87
3271 3665 4.035675 CCAATTTCTTCTAGATTCGCCACC 59.964 45.833 0.00 0.00 0.00 4.61
3282 3676 2.867793 TTCGCCACCGGTGATGATGG 62.868 60.000 36.07 19.12 42.13 3.51
3325 3719 4.263905 ACTCTAGCAATTCCAAATCACCCA 60.264 41.667 0.00 0.00 0.00 4.51
3354 3748 3.638160 GGGACAAATGTGCATCCATATGT 59.362 43.478 7.37 0.00 38.19 2.29
3355 3749 4.826733 GGGACAAATGTGCATCCATATGTA 59.173 41.667 7.37 0.00 38.19 2.29
3356 3750 5.048504 GGGACAAATGTGCATCCATATGTAG 60.049 44.000 7.37 0.00 38.19 2.74
3414 3812 1.583856 CAGTGCGACGTGTACATCATC 59.416 52.381 0.00 0.00 35.35 2.92
3415 3813 1.201414 AGTGCGACGTGTACATCATCA 59.799 47.619 0.00 0.00 35.35 3.07
3481 3883 6.128445 GCGGAGTATAAAATCCTCATGACATG 60.128 42.308 9.28 9.28 33.12 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.387929 GTCTACGGATCCGGATGCAA 59.612 55.000 35.87 19.68 44.69 4.08
1 2 1.461091 GGTCTACGGATCCGGATGCA 61.461 60.000 35.87 15.32 44.69 3.96
2 3 1.289380 GGTCTACGGATCCGGATGC 59.711 63.158 35.87 24.88 44.69 3.91
3 4 0.314302 GTGGTCTACGGATCCGGATG 59.686 60.000 35.87 24.20 44.69 3.51
4 5 0.826672 GGTGGTCTACGGATCCGGAT 60.827 60.000 35.87 19.21 44.69 4.18
5 6 1.454479 GGTGGTCTACGGATCCGGA 60.454 63.158 35.87 28.94 44.69 5.14
6 7 0.179009 TAGGTGGTCTACGGATCCGG 60.179 60.000 35.87 20.49 44.69 5.14
7 8 1.236628 CTAGGTGGTCTACGGATCCG 58.763 60.000 32.20 32.20 46.03 4.18
8 9 0.960286 GCTAGGTGGTCTACGGATCC 59.040 60.000 0.00 0.00 0.00 3.36
9 10 0.592148 CGCTAGGTGGTCTACGGATC 59.408 60.000 0.00 0.00 0.00 3.36
10 11 0.182061 TCGCTAGGTGGTCTACGGAT 59.818 55.000 0.00 0.00 0.00 4.18
11 12 0.182061 ATCGCTAGGTGGTCTACGGA 59.818 55.000 0.00 0.00 0.00 4.69
12 13 0.311165 CATCGCTAGGTGGTCTACGG 59.689 60.000 0.00 0.00 0.00 4.02
13 14 1.002684 GTCATCGCTAGGTGGTCTACG 60.003 57.143 0.00 0.00 0.00 3.51
14 15 2.299521 AGTCATCGCTAGGTGGTCTAC 58.700 52.381 0.00 0.00 0.00 2.59
15 16 2.730934 AGTCATCGCTAGGTGGTCTA 57.269 50.000 0.00 0.00 0.00 2.59
16 17 2.172930 TCTAGTCATCGCTAGGTGGTCT 59.827 50.000 0.00 0.00 39.05 3.85
17 18 2.573369 TCTAGTCATCGCTAGGTGGTC 58.427 52.381 0.00 0.00 39.05 4.02
18 19 2.730934 TCTAGTCATCGCTAGGTGGT 57.269 50.000 0.00 0.00 39.05 4.16
19 20 2.287909 GCTTCTAGTCATCGCTAGGTGG 60.288 54.545 0.00 0.00 39.05 4.61
20 21 2.359214 TGCTTCTAGTCATCGCTAGGTG 59.641 50.000 0.00 0.00 39.05 4.00
21 22 2.656002 TGCTTCTAGTCATCGCTAGGT 58.344 47.619 0.00 0.00 39.05 3.08
22 23 3.932545 ATGCTTCTAGTCATCGCTAGG 57.067 47.619 0.00 0.00 39.05 3.02
23 24 4.864633 TCAATGCTTCTAGTCATCGCTAG 58.135 43.478 0.00 0.00 39.70 3.42
24 25 4.918810 TCAATGCTTCTAGTCATCGCTA 57.081 40.909 0.00 0.00 0.00 4.26
25 26 3.808466 TCAATGCTTCTAGTCATCGCT 57.192 42.857 0.00 0.00 0.00 4.93
26 27 3.303001 GCTTCAATGCTTCTAGTCATCGC 60.303 47.826 0.00 0.00 0.00 4.58
27 28 3.060674 CGCTTCAATGCTTCTAGTCATCG 60.061 47.826 0.00 0.00 0.00 3.84
28 29 4.115516 TCGCTTCAATGCTTCTAGTCATC 58.884 43.478 0.00 0.00 0.00 2.92
29 30 4.118410 CTCGCTTCAATGCTTCTAGTCAT 58.882 43.478 0.00 0.00 0.00 3.06
30 31 3.515630 CTCGCTTCAATGCTTCTAGTCA 58.484 45.455 0.00 0.00 0.00 3.41
31 32 2.283884 GCTCGCTTCAATGCTTCTAGTC 59.716 50.000 0.00 0.00 0.00 2.59
32 33 2.275318 GCTCGCTTCAATGCTTCTAGT 58.725 47.619 0.00 0.00 0.00 2.57
33 34 1.596727 GGCTCGCTTCAATGCTTCTAG 59.403 52.381 0.00 0.00 0.00 2.43
34 35 1.656652 GGCTCGCTTCAATGCTTCTA 58.343 50.000 0.00 0.00 0.00 2.10
35 36 1.364626 CGGCTCGCTTCAATGCTTCT 61.365 55.000 0.00 0.00 0.00 2.85
36 37 1.061570 CGGCTCGCTTCAATGCTTC 59.938 57.895 0.00 0.00 0.00 3.86
37 38 0.955428 TTCGGCTCGCTTCAATGCTT 60.955 50.000 0.00 0.00 0.00 3.91
38 39 1.364626 CTTCGGCTCGCTTCAATGCT 61.365 55.000 0.00 0.00 0.00 3.79
39 40 1.061570 CTTCGGCTCGCTTCAATGC 59.938 57.895 0.00 0.00 0.00 3.56
40 41 0.371645 GTCTTCGGCTCGCTTCAATG 59.628 55.000 0.00 0.00 0.00 2.82
41 42 1.078759 CGTCTTCGGCTCGCTTCAAT 61.079 55.000 0.00 0.00 0.00 2.57
42 43 1.733041 CGTCTTCGGCTCGCTTCAA 60.733 57.895 0.00 0.00 0.00 2.69
43 44 2.126463 CGTCTTCGGCTCGCTTCA 60.126 61.111 0.00 0.00 0.00 3.02
44 45 3.546397 GCGTCTTCGGCTCGCTTC 61.546 66.667 0.00 0.00 45.29 3.86
55 56 4.838152 ATGATGGCGGCGCGTCTT 62.838 61.111 26.95 19.92 30.55 3.01
56 57 4.838152 AATGATGGCGGCGCGTCT 62.838 61.111 26.95 12.74 30.55 4.18
57 58 4.596180 CAATGATGGCGGCGCGTC 62.596 66.667 26.95 24.84 0.00 5.19
60 61 4.918129 CAGCAATGATGGCGGCGC 62.918 66.667 26.17 26.17 36.08 6.53
61 62 4.918129 GCAGCAATGATGGCGGCG 62.918 66.667 0.23 0.51 42.16 6.46
63 64 1.783031 GAGAGCAGCAATGATGGCGG 61.783 60.000 0.00 0.00 36.08 6.13
64 65 1.647629 GAGAGCAGCAATGATGGCG 59.352 57.895 0.00 0.00 36.08 5.69
65 66 1.453762 GGGAGAGCAGCAATGATGGC 61.454 60.000 0.00 0.00 0.00 4.40
66 67 0.183014 AGGGAGAGCAGCAATGATGG 59.817 55.000 0.00 0.00 0.00 3.51
67 68 1.595466 GAGGGAGAGCAGCAATGATG 58.405 55.000 0.00 0.00 0.00 3.07
68 69 0.106335 CGAGGGAGAGCAGCAATGAT 59.894 55.000 0.00 0.00 0.00 2.45
69 70 1.519246 CGAGGGAGAGCAGCAATGA 59.481 57.895 0.00 0.00 0.00 2.57
70 71 2.178890 GCGAGGGAGAGCAGCAATG 61.179 63.158 0.00 0.00 0.00 2.82
71 72 2.188994 GCGAGGGAGAGCAGCAAT 59.811 61.111 0.00 0.00 0.00 3.56
72 73 4.087892 GGCGAGGGAGAGCAGCAA 62.088 66.667 0.00 0.00 34.54 3.91
90 91 0.822121 ACAAGTTTTGTCCGGCCTCC 60.822 55.000 0.00 0.00 40.56 4.30
91 92 1.029681 AACAAGTTTTGTCCGGCCTC 58.970 50.000 0.00 0.00 44.59 4.70
92 93 2.351706 TAACAAGTTTTGTCCGGCCT 57.648 45.000 0.00 0.00 44.59 5.19
93 94 3.754850 ACTATAACAAGTTTTGTCCGGCC 59.245 43.478 0.00 0.00 44.59 6.13
94 95 5.870978 TCTACTATAACAAGTTTTGTCCGGC 59.129 40.000 0.00 0.00 44.59 6.13
95 96 6.869913 TGTCTACTATAACAAGTTTTGTCCGG 59.130 38.462 0.00 0.00 44.59 5.14
96 97 7.878477 TGTCTACTATAACAAGTTTTGTCCG 57.122 36.000 0.00 0.00 44.59 4.79
103 104 9.877178 CTTCCAGATTGTCTACTATAACAAGTT 57.123 33.333 0.00 0.00 38.66 2.66
104 105 9.036980 ACTTCCAGATTGTCTACTATAACAAGT 57.963 33.333 0.00 0.00 38.66 3.16
105 106 9.877178 AACTTCCAGATTGTCTACTATAACAAG 57.123 33.333 0.00 0.00 38.66 3.16
106 107 9.653287 CAACTTCCAGATTGTCTACTATAACAA 57.347 33.333 0.00 0.00 39.52 2.83
107 108 8.812972 ACAACTTCCAGATTGTCTACTATAACA 58.187 33.333 0.00 0.00 33.80 2.41
108 109 9.654663 AACAACTTCCAGATTGTCTACTATAAC 57.345 33.333 0.00 0.00 38.08 1.89
111 112 9.256228 TCTAACAACTTCCAGATTGTCTACTAT 57.744 33.333 0.00 0.00 38.08 2.12
112 113 8.521176 GTCTAACAACTTCCAGATTGTCTACTA 58.479 37.037 0.00 0.00 38.08 1.82
113 114 7.015292 TGTCTAACAACTTCCAGATTGTCTACT 59.985 37.037 0.00 0.00 38.08 2.57
114 115 7.116519 GTGTCTAACAACTTCCAGATTGTCTAC 59.883 40.741 0.00 0.00 38.08 2.59
115 116 7.152645 GTGTCTAACAACTTCCAGATTGTCTA 58.847 38.462 0.00 0.00 38.08 2.59
116 117 5.992217 GTGTCTAACAACTTCCAGATTGTCT 59.008 40.000 0.00 0.00 38.08 3.41
117 118 5.107453 CGTGTCTAACAACTTCCAGATTGTC 60.107 44.000 0.00 0.00 38.08 3.18
118 119 4.750098 CGTGTCTAACAACTTCCAGATTGT 59.250 41.667 0.00 0.00 40.76 2.71
119 120 4.152402 CCGTGTCTAACAACTTCCAGATTG 59.848 45.833 0.00 0.00 0.00 2.67
120 121 4.039973 TCCGTGTCTAACAACTTCCAGATT 59.960 41.667 0.00 0.00 0.00 2.40
121 122 3.576982 TCCGTGTCTAACAACTTCCAGAT 59.423 43.478 0.00 0.00 0.00 2.90
122 123 2.960384 TCCGTGTCTAACAACTTCCAGA 59.040 45.455 0.00 0.00 0.00 3.86
123 124 3.057734 GTCCGTGTCTAACAACTTCCAG 58.942 50.000 0.00 0.00 0.00 3.86
124 125 2.431419 TGTCCGTGTCTAACAACTTCCA 59.569 45.455 0.00 0.00 0.00 3.53
125 126 3.102052 TGTCCGTGTCTAACAACTTCC 57.898 47.619 0.00 0.00 0.00 3.46
126 127 3.432252 CCATGTCCGTGTCTAACAACTTC 59.568 47.826 0.00 0.00 0.00 3.01
127 128 3.181458 ACCATGTCCGTGTCTAACAACTT 60.181 43.478 0.00 0.00 0.00 2.66
128 129 2.367567 ACCATGTCCGTGTCTAACAACT 59.632 45.455 0.00 0.00 0.00 3.16
129 130 2.478894 CACCATGTCCGTGTCTAACAAC 59.521 50.000 0.00 0.00 0.00 3.32
130 131 2.549134 CCACCATGTCCGTGTCTAACAA 60.549 50.000 0.00 0.00 0.00 2.83
131 132 1.001520 CCACCATGTCCGTGTCTAACA 59.998 52.381 0.00 0.00 0.00 2.41
132 133 1.274167 TCCACCATGTCCGTGTCTAAC 59.726 52.381 0.00 0.00 0.00 2.34
133 134 1.634960 TCCACCATGTCCGTGTCTAA 58.365 50.000 0.00 0.00 0.00 2.10
134 135 1.860641 ATCCACCATGTCCGTGTCTA 58.139 50.000 0.00 0.00 0.00 2.59
135 136 0.984230 AATCCACCATGTCCGTGTCT 59.016 50.000 0.00 0.00 0.00 3.41
136 137 1.086696 CAATCCACCATGTCCGTGTC 58.913 55.000 0.00 0.00 0.00 3.67
137 138 0.400213 ACAATCCACCATGTCCGTGT 59.600 50.000 0.00 0.00 0.00 4.49
138 139 2.394930 TACAATCCACCATGTCCGTG 57.605 50.000 0.00 0.00 0.00 4.94
139 140 3.452990 TGTATACAATCCACCATGTCCGT 59.547 43.478 2.20 0.00 0.00 4.69
140 141 4.066646 TGTATACAATCCACCATGTCCG 57.933 45.455 2.20 0.00 0.00 4.79
141 142 5.179368 CGAATGTATACAATCCACCATGTCC 59.821 44.000 10.14 0.00 0.00 4.02
142 143 5.989168 TCGAATGTATACAATCCACCATGTC 59.011 40.000 10.14 0.00 0.00 3.06
143 144 5.924356 TCGAATGTATACAATCCACCATGT 58.076 37.500 10.14 0.00 0.00 3.21
144 145 7.173047 TCAATCGAATGTATACAATCCACCATG 59.827 37.037 10.14 5.35 0.00 3.66
145 146 7.223584 TCAATCGAATGTATACAATCCACCAT 58.776 34.615 10.14 0.00 0.00 3.55
146 147 6.587273 TCAATCGAATGTATACAATCCACCA 58.413 36.000 10.14 0.00 0.00 4.17
147 148 6.347725 GCTCAATCGAATGTATACAATCCACC 60.348 42.308 10.14 0.00 0.00 4.61
148 149 6.202762 TGCTCAATCGAATGTATACAATCCAC 59.797 38.462 10.14 0.00 0.00 4.02
149 150 6.287525 TGCTCAATCGAATGTATACAATCCA 58.712 36.000 10.14 0.00 0.00 3.41
150 151 6.785488 TGCTCAATCGAATGTATACAATCC 57.215 37.500 10.14 1.35 0.00 3.01
151 152 9.502145 TTTTTGCTCAATCGAATGTATACAATC 57.498 29.630 10.14 10.30 0.00 2.67
152 153 9.507280 CTTTTTGCTCAATCGAATGTATACAAT 57.493 29.630 10.14 0.25 0.00 2.71
153 154 7.484641 GCTTTTTGCTCAATCGAATGTATACAA 59.515 33.333 10.14 0.00 38.95 2.41
154 155 6.966632 GCTTTTTGCTCAATCGAATGTATACA 59.033 34.615 8.27 8.27 38.95 2.29
155 156 7.368750 GCTTTTTGCTCAATCGAATGTATAC 57.631 36.000 0.00 0.00 38.95 1.47
177 178 8.709308 AGTTCACAAAGATAATATGGTCTAGCT 58.291 33.333 0.00 0.00 0.00 3.32
178 179 8.894768 AGTTCACAAAGATAATATGGTCTAGC 57.105 34.615 0.00 0.00 0.00 3.42
203 205 9.578576 CCCTGGATCAAATCAAATAATCTCTTA 57.421 33.333 0.00 0.00 0.00 2.10
204 206 8.284435 TCCCTGGATCAAATCAAATAATCTCTT 58.716 33.333 0.00 0.00 0.00 2.85
207 209 9.443365 AAATCCCTGGATCAAATCAAATAATCT 57.557 29.630 0.00 0.00 33.08 2.40
213 215 7.789202 TGTTAAATCCCTGGATCAAATCAAA 57.211 32.000 0.00 0.00 33.08 2.69
223 225 7.762588 TTATTTCGTTTGTTAAATCCCTGGA 57.237 32.000 0.00 0.00 0.00 3.86
267 269 7.124448 GGAGGGAGTAGAGGTTAATATGTATGG 59.876 44.444 0.00 0.00 0.00 2.74
277 279 2.357569 GGAACGGAGGGAGTAGAGGTTA 60.358 54.545 0.00 0.00 0.00 2.85
278 280 1.619160 GGAACGGAGGGAGTAGAGGTT 60.619 57.143 0.00 0.00 0.00 3.50
279 281 0.033306 GGAACGGAGGGAGTAGAGGT 60.033 60.000 0.00 0.00 0.00 3.85
280 282 0.259356 AGGAACGGAGGGAGTAGAGG 59.741 60.000 0.00 0.00 0.00 3.69
281 283 3.294038 TTAGGAACGGAGGGAGTAGAG 57.706 52.381 0.00 0.00 0.00 2.43
282 284 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
283 285 7.450944 ACTTATATTTAGGAACGGAGGGAGTAG 59.549 40.741 0.00 0.00 0.00 2.57
286 288 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
288 290 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
316 318 8.324306 CCATATGTGGTCCATAGTGAAATCTAT 58.676 37.037 0.00 0.00 39.36 1.98
317 319 7.512402 TCCATATGTGGTCCATAGTGAAATCTA 59.488 37.037 8.51 0.00 46.16 1.98
318 320 6.329986 TCCATATGTGGTCCATAGTGAAATCT 59.670 38.462 8.51 0.00 46.16 2.40
319 321 6.533730 TCCATATGTGGTCCATAGTGAAATC 58.466 40.000 8.51 0.00 46.16 2.17
320 322 6.514012 TCCATATGTGGTCCATAGTGAAAT 57.486 37.500 8.51 0.00 46.16 2.17
321 323 5.966853 TCCATATGTGGTCCATAGTGAAA 57.033 39.130 8.51 0.00 46.16 2.69
322 324 5.369404 ACATCCATATGTGGTCCATAGTGAA 59.631 40.000 8.51 0.00 44.79 3.18
323 325 4.907269 ACATCCATATGTGGTCCATAGTGA 59.093 41.667 8.51 0.00 44.79 3.41
324 326 5.233083 ACATCCATATGTGGTCCATAGTG 57.767 43.478 8.51 0.00 44.79 2.74
325 327 6.501805 ACATACATCCATATGTGGTCCATAGT 59.498 38.462 8.51 0.15 45.99 2.12
326 328 6.950842 ACATACATCCATATGTGGTCCATAG 58.049 40.000 8.51 0.00 45.99 2.23
327 329 6.950860 ACATACATCCATATGTGGTCCATA 57.049 37.500 8.51 0.00 45.99 2.74
328 330 5.848286 ACATACATCCATATGTGGTCCAT 57.152 39.130 8.51 0.00 45.99 3.41
329 331 6.081356 TCTACATACATCCATATGTGGTCCA 58.919 40.000 8.51 0.00 45.99 4.02
330 332 6.605471 TCTACATACATCCATATGTGGTCC 57.395 41.667 8.51 0.00 45.99 4.46
331 333 6.536582 GCATCTACATACATCCATATGTGGTC 59.463 42.308 8.51 0.00 45.99 4.02
332 334 6.013466 TGCATCTACATACATCCATATGTGGT 60.013 38.462 8.51 0.00 45.99 4.16
333 335 6.408869 TGCATCTACATACATCCATATGTGG 58.591 40.000 1.19 1.19 45.99 4.17
334 336 8.502105 AATGCATCTACATACATCCATATGTG 57.498 34.615 0.00 0.00 45.99 3.21
339 341 8.600668 ACTCTAAATGCATCTACATACATCCAT 58.399 33.333 0.00 0.00 0.00 3.41
340 342 7.874528 CACTCTAAATGCATCTACATACATCCA 59.125 37.037 0.00 0.00 0.00 3.41
341 343 7.875041 ACACTCTAAATGCATCTACATACATCC 59.125 37.037 0.00 0.00 0.00 3.51
342 344 8.824159 ACACTCTAAATGCATCTACATACATC 57.176 34.615 0.00 0.00 0.00 3.06
343 345 9.920133 CTACACTCTAAATGCATCTACATACAT 57.080 33.333 0.00 0.00 0.00 2.29
344 346 9.131791 TCTACACTCTAAATGCATCTACATACA 57.868 33.333 0.00 0.00 0.00 2.29
347 349 9.703892 GAATCTACACTCTAAATGCATCTACAT 57.296 33.333 0.00 0.00 0.00 2.29
348 350 8.695456 TGAATCTACACTCTAAATGCATCTACA 58.305 33.333 0.00 0.00 0.00 2.74
349 351 8.973378 GTGAATCTACACTCTAAATGCATCTAC 58.027 37.037 0.00 0.00 37.73 2.59
350 352 8.918116 AGTGAATCTACACTCTAAATGCATCTA 58.082 33.333 0.00 0.00 46.36 1.98
351 353 7.790027 AGTGAATCTACACTCTAAATGCATCT 58.210 34.615 0.00 0.00 46.36 2.90
364 366 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
365 367 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
366 368 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
367 369 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
368 370 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
369 371 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
370 372 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
371 373 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
372 374 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
373 375 6.408858 ACTACATACGAAGCAAAATGAGTG 57.591 37.500 0.00 0.00 0.00 3.51
374 376 5.581085 GGACTACATACGAAGCAAAATGAGT 59.419 40.000 0.00 0.00 0.00 3.41
375 377 5.580691 TGGACTACATACGAAGCAAAATGAG 59.419 40.000 0.00 0.00 0.00 2.90
376 378 5.483811 TGGACTACATACGAAGCAAAATGA 58.516 37.500 0.00 0.00 0.00 2.57
377 379 5.794687 TGGACTACATACGAAGCAAAATG 57.205 39.130 0.00 0.00 0.00 2.32
378 380 8.559536 CATTATGGACTACATACGAAGCAAAAT 58.440 33.333 0.00 0.00 41.61 1.82
379 381 7.766738 TCATTATGGACTACATACGAAGCAAAA 59.233 33.333 0.00 0.00 41.61 2.44
380 382 7.269316 TCATTATGGACTACATACGAAGCAAA 58.731 34.615 0.00 0.00 41.61 3.68
381 383 6.811954 TCATTATGGACTACATACGAAGCAA 58.188 36.000 0.00 0.00 41.61 3.91
382 384 6.399639 TCATTATGGACTACATACGAAGCA 57.600 37.500 0.00 0.00 41.61 3.91
383 385 7.709269 TTTCATTATGGACTACATACGAAGC 57.291 36.000 0.00 0.00 41.61 3.86
384 386 9.698309 AGATTTCATTATGGACTACATACGAAG 57.302 33.333 0.00 0.00 41.61 3.79
385 387 9.692749 GAGATTTCATTATGGACTACATACGAA 57.307 33.333 0.00 0.00 41.61 3.85
386 388 9.078990 AGAGATTTCATTATGGACTACATACGA 57.921 33.333 0.00 0.00 41.61 3.43
394 396 9.606631 GTCTTTGTAGAGATTTCATTATGGACT 57.393 33.333 0.00 0.00 0.00 3.85
395 397 9.606631 AGTCTTTGTAGAGATTTCATTATGGAC 57.393 33.333 0.00 0.00 0.00 4.02
426 428 9.810545 CAAAACAATACTTCCTTGGTTCTTAAA 57.189 29.630 0.00 0.00 32.50 1.52
427 429 9.191479 TCAAAACAATACTTCCTTGGTTCTTAA 57.809 29.630 0.00 0.00 32.50 1.85
428 430 8.754991 TCAAAACAATACTTCCTTGGTTCTTA 57.245 30.769 0.00 0.00 32.50 2.10
429 431 7.654022 TCAAAACAATACTTCCTTGGTTCTT 57.346 32.000 0.00 0.00 32.50 2.52
430 432 7.839680 ATCAAAACAATACTTCCTTGGTTCT 57.160 32.000 0.00 0.00 32.50 3.01
431 433 8.887036 AAATCAAAACAATACTTCCTTGGTTC 57.113 30.769 0.00 0.00 32.50 3.62
432 434 9.679661 AAAAATCAAAACAATACTTCCTTGGTT 57.320 25.926 0.00 0.00 35.08 3.67
433 435 9.325198 GAAAAATCAAAACAATACTTCCTTGGT 57.675 29.630 0.00 0.00 0.00 3.67
434 436 8.487176 CGAAAAATCAAAACAATACTTCCTTGG 58.513 33.333 0.00 0.00 0.00 3.61
435 437 9.030301 ACGAAAAATCAAAACAATACTTCCTTG 57.970 29.630 0.00 0.00 0.00 3.61
436 438 9.244799 GACGAAAAATCAAAACAATACTTCCTT 57.755 29.630 0.00 0.00 0.00 3.36
437 439 8.630037 AGACGAAAAATCAAAACAATACTTCCT 58.370 29.630 0.00 0.00 0.00 3.36
438 440 8.797266 AGACGAAAAATCAAAACAATACTTCC 57.203 30.769 0.00 0.00 0.00 3.46
441 443 9.394477 GCTAAGACGAAAAATCAAAACAATACT 57.606 29.630 0.00 0.00 0.00 2.12
442 444 8.355806 CGCTAAGACGAAAAATCAAAACAATAC 58.644 33.333 0.00 0.00 34.06 1.89
443 445 8.283992 TCGCTAAGACGAAAAATCAAAACAATA 58.716 29.630 0.00 0.00 39.54 1.90
458 460 2.295349 ACCACTCTTTTCGCTAAGACGA 59.705 45.455 0.00 0.00 41.04 4.20
459 461 2.408704 CACCACTCTTTTCGCTAAGACG 59.591 50.000 0.00 0.00 31.19 4.18
460 462 2.737252 CCACCACTCTTTTCGCTAAGAC 59.263 50.000 0.00 0.00 31.19 3.01
461 463 2.870435 GCCACCACTCTTTTCGCTAAGA 60.870 50.000 0.00 0.00 33.33 2.10
464 466 0.321298 GGCCACCACTCTTTTCGCTA 60.321 55.000 0.00 0.00 0.00 4.26
465 467 1.600916 GGCCACCACTCTTTTCGCT 60.601 57.895 0.00 0.00 0.00 4.93
466 468 2.954611 GGCCACCACTCTTTTCGC 59.045 61.111 0.00 0.00 0.00 4.70
511 513 0.315251 CTGCGCTATCCCTTCATCGA 59.685 55.000 9.73 0.00 0.00 3.59
528 533 1.134753 AGCTGTCTCGAGCATCTTCTG 59.865 52.381 7.81 0.00 41.83 3.02
656 661 9.063615 CGGTAGGCTTAATTTATCCAAATAAGT 57.936 33.333 0.00 0.00 33.09 2.24
657 662 9.280174 TCGGTAGGCTTAATTTATCCAAATAAG 57.720 33.333 0.00 0.00 33.09 1.73
658 663 9.802039 ATCGGTAGGCTTAATTTATCCAAATAA 57.198 29.630 0.00 0.00 33.09 1.40
712 720 6.053650 GGTTGTTAATTAGCGGATAGGAGTT 58.946 40.000 0.00 0.00 0.00 3.01
990 1014 3.136443 GTGAGAGAGAGATGAGGAGAGGA 59.864 52.174 0.00 0.00 0.00 3.71
1063 1104 3.982316 CTCCATGGCCGCTGCTTCA 62.982 63.158 6.96 0.00 37.74 3.02
1480 1559 0.542467 TGTAGAACACGGCCCTGGTA 60.542 55.000 6.69 0.00 0.00 3.25
1749 1831 2.034879 CAGGCCGGTGCACTGTAAG 61.035 63.158 23.77 10.26 40.13 2.34
1788 1870 3.314357 GTCTGTCCAAACCAAACACCTAC 59.686 47.826 0.00 0.00 0.00 3.18
1789 1871 3.201266 AGTCTGTCCAAACCAAACACCTA 59.799 43.478 0.00 0.00 0.00 3.08
1790 1872 2.025321 AGTCTGTCCAAACCAAACACCT 60.025 45.455 0.00 0.00 0.00 4.00
1791 1873 2.357952 GAGTCTGTCCAAACCAAACACC 59.642 50.000 0.00 0.00 0.00 4.16
1792 1874 3.013921 TGAGTCTGTCCAAACCAAACAC 58.986 45.455 0.00 0.00 0.00 3.32
1807 1889 5.495926 AATCAGTTTCACCTCATGAGTCT 57.504 39.130 21.11 3.17 38.99 3.24
1812 1894 7.086376 CCAGTTTTAATCAGTTTCACCTCATG 58.914 38.462 0.00 0.00 0.00 3.07
1826 1928 4.929211 GCATGTTTCCCACCAGTTTTAATC 59.071 41.667 0.00 0.00 0.00 1.75
1829 1931 3.300388 TGCATGTTTCCCACCAGTTTTA 58.700 40.909 0.00 0.00 0.00 1.52
2009 2132 2.975489 AGCTACTAATGATGGTGGAGGG 59.025 50.000 0.00 0.00 0.00 4.30
2025 2148 3.067721 AGCTTAACACGATCGAGCTAC 57.932 47.619 24.34 4.73 41.54 3.58
2026 2149 3.128068 TCAAGCTTAACACGATCGAGCTA 59.872 43.478 23.49 9.73 42.44 3.32
2027 2150 2.094700 TCAAGCTTAACACGATCGAGCT 60.095 45.455 24.34 21.33 44.95 4.09
2069 2255 2.223502 TGAGATTAGTAAGCTGGTCGCG 60.224 50.000 5.17 0.00 45.59 5.87
2073 2259 4.645136 TGTCGATGAGATTAGTAAGCTGGT 59.355 41.667 5.17 0.00 0.00 4.00
2074 2260 4.979197 GTGTCGATGAGATTAGTAAGCTGG 59.021 45.833 5.17 0.00 0.00 4.85
2075 2261 5.582550 TGTGTCGATGAGATTAGTAAGCTG 58.417 41.667 5.17 0.00 0.00 4.24
2097 2283 5.840243 TCCACTGCCAAATTATCAGATTG 57.160 39.130 8.07 0.00 0.00 2.67
2098 2284 6.371278 AGATCCACTGCCAAATTATCAGATT 58.629 36.000 8.07 0.00 0.00 2.40
2233 2430 5.178252 CGATGAACAGCGATAAGATTCCATT 59.822 40.000 6.62 0.00 43.75 3.16
2470 2702 2.647529 TACATAGATATGCACGCCCG 57.352 50.000 0.00 0.00 37.19 6.13
2499 2731 9.587772 CGATCGTCCTTCCTTCATAATAATAAT 57.412 33.333 7.03 0.00 0.00 1.28
2500 2732 8.799367 TCGATCGTCCTTCCTTCATAATAATAA 58.201 33.333 15.94 0.00 0.00 1.40
2501 2733 8.344446 TCGATCGTCCTTCCTTCATAATAATA 57.656 34.615 15.94 0.00 0.00 0.98
2502 2734 7.039644 ACTCGATCGTCCTTCCTTCATAATAAT 60.040 37.037 15.94 0.00 0.00 1.28
2503 2735 6.264744 ACTCGATCGTCCTTCCTTCATAATAA 59.735 38.462 15.94 0.00 0.00 1.40
2517 2749 6.359964 GATCGTTAATTAACTCGATCGTCC 57.640 41.667 23.90 11.05 45.15 4.79
2568 2800 8.539770 AAATAGGACGATGATCACACAATATC 57.460 34.615 0.00 0.00 0.00 1.63
2572 2804 5.584649 GGAAAATAGGACGATGATCACACAA 59.415 40.000 0.00 0.00 0.00 3.33
2573 2805 5.104941 AGGAAAATAGGACGATGATCACACA 60.105 40.000 0.00 0.00 0.00 3.72
2574 2806 5.360591 AGGAAAATAGGACGATGATCACAC 58.639 41.667 0.00 0.00 0.00 3.82
2621 2870 5.163632 TGAGTGCGTCCGTGTAGATAATTAA 60.164 40.000 0.00 0.00 0.00 1.40
2622 2871 4.336153 TGAGTGCGTCCGTGTAGATAATTA 59.664 41.667 0.00 0.00 0.00 1.40
2623 2872 3.129813 TGAGTGCGTCCGTGTAGATAATT 59.870 43.478 0.00 0.00 0.00 1.40
2624 2873 2.686405 TGAGTGCGTCCGTGTAGATAAT 59.314 45.455 0.00 0.00 0.00 1.28
2664 2913 2.021457 ACGAAAACCACCACCAAAGAG 58.979 47.619 0.00 0.00 0.00 2.85
2682 2931 1.193874 GCACGAAAGGTTAACTCCACG 59.806 52.381 5.42 9.35 0.00 4.94
2694 2943 0.824759 ACCCCTAGCTAGCACGAAAG 59.175 55.000 18.83 5.84 0.00 2.62
2706 2955 3.370953 CCACCAAAGAGATGAACCCCTAG 60.371 52.174 0.00 0.00 0.00 3.02
2707 2956 2.576191 CCACCAAAGAGATGAACCCCTA 59.424 50.000 0.00 0.00 0.00 3.53
2708 2957 1.355720 CCACCAAAGAGATGAACCCCT 59.644 52.381 0.00 0.00 0.00 4.79
2709 2958 1.075536 ACCACCAAAGAGATGAACCCC 59.924 52.381 0.00 0.00 0.00 4.95
2768 3019 2.826128 GCCAGGGTTTTCCTCTTTTAGG 59.174 50.000 0.00 0.00 46.12 2.69
2770 3021 2.449345 AGGCCAGGGTTTTCCTCTTTTA 59.551 45.455 5.01 0.00 46.12 1.52
2809 3060 8.763049 CAGTGACTCTGAAATTAATGACTGTA 57.237 34.615 0.00 0.00 46.27 2.74
2882 3133 1.742411 CGACAAGTTATGCGGATGGGT 60.742 52.381 0.00 0.00 0.00 4.51
2884 3135 0.304705 GCGACAAGTTATGCGGATGG 59.695 55.000 0.00 0.00 0.00 3.51
2890 3141 1.201812 CGTGTCAGCGACAAGTTATGC 60.202 52.381 11.92 0.00 44.49 3.14
2914 3277 1.787012 CATTGTTCAACCAGCTTGGC 58.213 50.000 2.50 0.00 42.67 4.52
2923 3286 5.294060 ACTGAAATTGGTTGCATTGTTCAAC 59.706 36.000 0.00 0.00 42.13 3.18
2940 3303 2.173669 CGATGCGGCCGACTGAAAT 61.174 57.895 33.48 11.48 0.00 2.17
2952 3315 1.845809 GCTTATGGCCTTCCGATGCG 61.846 60.000 3.32 0.00 34.14 4.73
2993 3356 4.574599 AGATTCGTCATCGATCATCACA 57.425 40.909 0.00 0.00 45.65 3.58
3003 3366 9.495754 CTTTATTTTCTTCCAAGATTCGTCATC 57.504 33.333 0.00 0.00 34.49 2.92
3004 3367 8.462016 CCTTTATTTTCTTCCAAGATTCGTCAT 58.538 33.333 0.00 0.00 34.49 3.06
3009 3372 8.060931 AGCTCCTTTATTTTCTTCCAAGATTC 57.939 34.615 0.00 0.00 34.49 2.52
3026 3389 5.619981 GCACGATTAACATTGAAGCTCCTTT 60.620 40.000 0.00 0.00 0.00 3.11
3033 3396 5.203358 TCTTCGCACGATTAACATTGAAG 57.797 39.130 0.00 0.00 34.40 3.02
3034 3397 5.599359 TTCTTCGCACGATTAACATTGAA 57.401 34.783 0.00 0.00 0.00 2.69
3045 3408 1.234821 ATGGCTTTTTCTTCGCACGA 58.765 45.000 0.00 0.00 0.00 4.35
3046 3409 2.892373 TATGGCTTTTTCTTCGCACG 57.108 45.000 0.00 0.00 0.00 5.34
3050 3413 7.807680 AGTAAGAGTTTATGGCTTTTTCTTCG 58.192 34.615 0.00 0.00 0.00 3.79
3064 3427 4.404715 CCGAATGGAGGGAGTAAGAGTTTA 59.595 45.833 0.00 0.00 37.49 2.01
3079 3442 4.814234 CCGAGACAAATAATTCCGAATGGA 59.186 41.667 0.00 0.00 44.61 3.41
3080 3443 4.814234 TCCGAGACAAATAATTCCGAATGG 59.186 41.667 0.00 0.00 0.00 3.16
3081 3444 5.984233 TCCGAGACAAATAATTCCGAATG 57.016 39.130 0.00 0.00 0.00 2.67
3082 3445 6.995511 TTTCCGAGACAAATAATTCCGAAT 57.004 33.333 0.00 0.00 0.00 3.34
3083 3446 6.596106 TCATTTCCGAGACAAATAATTCCGAA 59.404 34.615 0.00 0.00 0.00 4.30
3084 3447 6.110033 TCATTTCCGAGACAAATAATTCCGA 58.890 36.000 0.00 0.00 0.00 4.55
3085 3448 6.358118 TCATTTCCGAGACAAATAATTCCG 57.642 37.500 0.00 0.00 0.00 4.30
3086 3449 8.190784 ACATTCATTTCCGAGACAAATAATTCC 58.809 33.333 0.00 0.00 0.00 3.01
3090 3453 9.613428 AGATACATTCATTTCCGAGACAAATAA 57.387 29.630 0.00 0.00 0.00 1.40
3092 3455 9.265901 CTAGATACATTCATTTCCGAGACAAAT 57.734 33.333 0.00 0.00 0.00 2.32
3093 3456 8.474831 TCTAGATACATTCATTTCCGAGACAAA 58.525 33.333 0.00 0.00 0.00 2.83
3094 3457 8.007405 TCTAGATACATTCATTTCCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
3095 3458 7.582667 TCTAGATACATTCATTTCCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
3096 3459 8.138712 AGTTCTAGATACATTCATTTCCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
3097 3460 8.239038 AGTTCTAGATACATTCATTTCCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
3098 3461 9.967346 TTAGTTCTAGATACATTCATTTCCGAG 57.033 33.333 0.00 0.00 0.00 4.63
3128 3491 7.877097 GCAGAAATGGATGTATCTAGAAGATGT 59.123 37.037 0.00 0.00 35.37 3.06
3129 3492 7.063191 CGCAGAAATGGATGTATCTAGAAGATG 59.937 40.741 0.00 0.00 35.37 2.90
3130 3493 7.039434 TCGCAGAAATGGATGTATCTAGAAGAT 60.039 37.037 0.00 0.00 38.70 2.40
3131 3494 6.265422 TCGCAGAAATGGATGTATCTAGAAGA 59.735 38.462 0.00 0.00 0.00 2.87
3132 3495 6.364706 GTCGCAGAAATGGATGTATCTAGAAG 59.635 42.308 0.00 0.00 39.69 2.85
3133 3496 6.183360 TGTCGCAGAAATGGATGTATCTAGAA 60.183 38.462 0.00 0.00 39.69 2.10
3134 3497 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
3135 3498 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
3136 3499 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
3137 3500 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
3138 3501 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
3139 3502 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
3140 3503 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
3141 3504 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
3142 3505 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
3143 3506 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
3144 3507 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
3145 3508 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
3146 3509 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
3147 3510 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
3148 3511 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
3149 3512 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
3150 3513 3.306917 TTCGGAATTACTTGTCGCAGA 57.693 42.857 0.00 0.00 0.00 4.26
3151 3514 3.242413 CCATTCGGAATTACTTGTCGCAG 60.242 47.826 0.00 0.00 0.00 5.18
3152 3515 2.675844 CCATTCGGAATTACTTGTCGCA 59.324 45.455 0.00 0.00 0.00 5.10
3153 3516 2.933906 TCCATTCGGAATTACTTGTCGC 59.066 45.455 0.00 0.00 38.83 5.19
3154 3517 3.555956 CCTCCATTCGGAATTACTTGTCG 59.444 47.826 0.00 0.00 42.21 4.35
3155 3518 3.877508 CCCTCCATTCGGAATTACTTGTC 59.122 47.826 0.00 0.00 42.21 3.18
3156 3519 3.521937 TCCCTCCATTCGGAATTACTTGT 59.478 43.478 0.00 0.00 42.21 3.16
3157 3520 4.130118 CTCCCTCCATTCGGAATTACTTG 58.870 47.826 0.00 0.00 42.21 3.16
3158 3521 3.780850 ACTCCCTCCATTCGGAATTACTT 59.219 43.478 0.00 0.00 42.21 2.24
3159 3522 3.385115 ACTCCCTCCATTCGGAATTACT 58.615 45.455 0.00 0.00 42.21 2.24
3160 3523 3.840124 ACTCCCTCCATTCGGAATTAC 57.160 47.619 0.00 0.00 42.21 1.89
3161 3524 4.553678 ACTACTCCCTCCATTCGGAATTA 58.446 43.478 0.00 0.00 42.21 1.40
3162 3525 3.385115 ACTACTCCCTCCATTCGGAATT 58.615 45.455 0.00 0.00 42.21 2.17
3163 3526 3.047695 ACTACTCCCTCCATTCGGAAT 57.952 47.619 0.00 0.00 42.21 3.01
3164 3527 2.544844 ACTACTCCCTCCATTCGGAA 57.455 50.000 0.00 0.00 42.21 4.30
3165 3528 2.544844 AACTACTCCCTCCATTCGGA 57.455 50.000 0.00 0.00 39.79 4.55
3166 3529 3.055385 TCAAAACTACTCCCTCCATTCGG 60.055 47.826 0.00 0.00 0.00 4.30
3167 3530 4.184629 CTCAAAACTACTCCCTCCATTCG 58.815 47.826 0.00 0.00 0.00 3.34
3168 3531 5.167303 ACTCAAAACTACTCCCTCCATTC 57.833 43.478 0.00 0.00 0.00 2.67
3169 3532 5.073144 TCAACTCAAAACTACTCCCTCCATT 59.927 40.000 0.00 0.00 0.00 3.16
3170 3533 4.597507 TCAACTCAAAACTACTCCCTCCAT 59.402 41.667 0.00 0.00 0.00 3.41
3171 3534 3.971305 TCAACTCAAAACTACTCCCTCCA 59.029 43.478 0.00 0.00 0.00 3.86
3172 3535 4.618920 TCAACTCAAAACTACTCCCTCC 57.381 45.455 0.00 0.00 0.00 4.30
3173 3536 8.617290 TTATTTCAACTCAAAACTACTCCCTC 57.383 34.615 0.00 0.00 0.00 4.30
3174 3537 7.665974 CCTTATTTCAACTCAAAACTACTCCCT 59.334 37.037 0.00 0.00 0.00 4.20
3175 3538 7.447545 ACCTTATTTCAACTCAAAACTACTCCC 59.552 37.037 0.00 0.00 0.00 4.30
3176 3539 8.392372 ACCTTATTTCAACTCAAAACTACTCC 57.608 34.615 0.00 0.00 0.00 3.85
3218 3581 1.415659 CTGCTAGTATTCAGCCCAGCT 59.584 52.381 0.00 0.00 40.77 4.24
3232 3595 8.877808 AAGAAATTGGAAAAGAAAACTGCTAG 57.122 30.769 0.00 0.00 0.00 3.42
3243 3606 6.969473 GGCGAATCTAGAAGAAATTGGAAAAG 59.031 38.462 0.00 0.00 0.00 2.27
3246 3609 5.354234 GTGGCGAATCTAGAAGAAATTGGAA 59.646 40.000 0.00 0.00 0.00 3.53
3247 3610 4.876107 GTGGCGAATCTAGAAGAAATTGGA 59.124 41.667 0.00 0.00 0.00 3.53
3249 3612 4.260375 CGGTGGCGAATCTAGAAGAAATTG 60.260 45.833 0.00 0.00 0.00 2.32
3251 3614 3.458189 CGGTGGCGAATCTAGAAGAAAT 58.542 45.455 0.00 0.00 0.00 2.17
3255 3618 0.460311 ACCGGTGGCGAATCTAGAAG 59.540 55.000 6.12 0.00 0.00 2.85
3256 3619 0.174845 CACCGGTGGCGAATCTAGAA 59.825 55.000 27.57 0.00 0.00 2.10
3257 3620 0.681887 TCACCGGTGGCGAATCTAGA 60.682 55.000 33.40 8.03 0.00 2.43
3258 3621 0.389391 ATCACCGGTGGCGAATCTAG 59.611 55.000 33.40 4.70 0.00 2.43
3271 3665 0.526739 TTCGTACGCCATCATCACCG 60.527 55.000 11.24 0.00 0.00 4.94
3282 3676 3.184986 AGTTGTGGTGTTAATTCGTACGC 59.815 43.478 11.24 0.00 0.00 4.42
3414 3812 1.750930 AGTGGTCAGCTCACTGGTG 59.249 57.895 5.79 0.00 44.59 4.17
3415 3813 4.302622 AGTGGTCAGCTCACTGGT 57.697 55.556 5.79 0.00 44.59 4.00
3457 3855 7.154656 TCATGTCATGAGGATTTTATACTCCG 58.845 38.462 11.62 0.00 39.62 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.