Multiple sequence alignment - TraesCS6D01G388800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G388800 chr6D 100.000 3254 0 0 1 3254 464793168 464789915 0.000000e+00 6010.0
1 TraesCS6D01G388800 chr6D 78.963 2315 363 56 837 3059 464799687 464797405 0.000000e+00 1463.0
2 TraesCS6D01G388800 chr6D 80.805 870 141 7 2206 3050 21706858 21705990 0.000000e+00 658.0
3 TraesCS6D01G388800 chr6D 79.901 806 158 4 977 1780 21709479 21708676 3.620000e-164 588.0
4 TraesCS6D01G388800 chr6B 84.991 2312 231 41 836 3059 708731080 708728797 0.000000e+00 2241.0
5 TraesCS6D01G388800 chr6B 90.372 1506 120 9 336 1832 708724569 708723080 0.000000e+00 1954.0
6 TraesCS6D01G388800 chr6B 84.512 1188 109 29 1967 3089 708723100 708721923 0.000000e+00 1105.0
7 TraesCS6D01G388800 chr6A 87.863 1137 130 5 907 2037 611338490 611337356 0.000000e+00 1328.0
8 TraesCS6D01G388800 chr6A 82.289 734 106 5 2220 2929 21337837 21337104 5.970000e-172 614.0
9 TraesCS6D01G388800 chr6A 88.446 502 34 3 2206 2683 611337221 611336720 4.680000e-163 584.0
10 TraesCS6D01G388800 chr6A 88.969 417 38 5 2675 3084 611336157 611335742 2.900000e-140 508.0
11 TraesCS6D01G388800 chr6A 83.791 401 63 2 2203 2601 13378742 13379142 2.370000e-101 379.0
12 TraesCS6D01G388800 chr6A 72.265 786 186 27 1027 1794 7009385 7008614 7.070000e-52 215.0
13 TraesCS6D01G388800 chr6A 96.296 54 2 0 1 54 444578212 444578159 4.470000e-14 89.8
14 TraesCS6D01G388800 chr5D 97.714 175 4 0 3080 3254 59970955 59971129 5.280000e-78 302.0
15 TraesCS6D01G388800 chr5D 95.652 184 6 2 3071 3254 55358716 55358535 8.830000e-76 294.0
16 TraesCS6D01G388800 chr5D 98.204 167 3 0 3088 3254 43154912 43154746 3.180000e-75 292.0
17 TraesCS6D01G388800 chr5D 94.737 57 3 0 1 57 141212301 141212357 4.470000e-14 89.8
18 TraesCS6D01G388800 chr1D 96.175 183 5 2 3074 3254 3061918 3062100 6.830000e-77 298.0
19 TraesCS6D01G388800 chr1D 98.204 167 2 1 3088 3254 8459602 8459437 1.140000e-74 291.0
20 TraesCS6D01G388800 chr1D 96.296 54 2 0 1 54 370560766 370560713 4.470000e-14 89.8
21 TraesCS6D01G388800 chr3D 98.795 166 2 0 3089 3254 14985362 14985197 2.450000e-76 296.0
22 TraesCS6D01G388800 chr3D 96.089 179 6 1 3077 3254 570235563 570235741 1.140000e-74 291.0
23 TraesCS6D01G388800 chr3D 75.373 268 57 9 2596 2858 597480859 597481122 1.590000e-23 121.0
24 TraesCS6D01G388800 chr7D 98.204 167 3 0 3088 3254 577058701 577058867 3.180000e-75 292.0
25 TraesCS6D01G388800 chr7D 72.593 540 134 14 1070 1602 188289141 188289673 7.220000e-37 165.0
26 TraesCS6D01G388800 chr7D 94.737 57 3 0 1 57 593763551 593763495 4.470000e-14 89.8
27 TraesCS6D01G388800 chr4D 97.093 172 3 2 3084 3254 497294460 497294290 4.110000e-74 289.0
28 TraesCS6D01G388800 chr4D 94.737 57 3 0 1 57 434743250 434743306 4.470000e-14 89.8
29 TraesCS6D01G388800 chr2A 73.427 715 169 18 1017 1716 765175567 765174859 6.970000e-62 248.0
30 TraesCS6D01G388800 chr2A 74.161 298 66 8 2596 2887 605400073 605400365 2.650000e-21 113.0
31 TraesCS6D01G388800 chr2B 72.829 714 174 17 1017 1716 798826365 798825658 3.270000e-55 226.0
32 TraesCS6D01G388800 chr3B 71.983 696 138 38 2208 2858 804170822 804171505 5.620000e-33 152.0
33 TraesCS6D01G388800 chr3B 81.208 149 24 4 2712 2858 804228968 804229114 2.050000e-22 117.0
34 TraesCS6D01G388800 chr3A 96.491 57 2 0 1 57 158829953 158830009 9.610000e-16 95.3
35 TraesCS6D01G388800 chr3A 94.737 57 3 0 1 57 45865227 45865171 4.470000e-14 89.8
36 TraesCS6D01G388800 chr7B 94.737 57 3 0 1 57 131419457 131419401 4.470000e-14 89.8
37 TraesCS6D01G388800 chr4A 89.394 66 6 1 1 65 333791399 333791464 7.480000e-12 82.4
38 TraesCS6D01G388800 chr4A 86.667 60 8 0 2410 2469 743562881 743562940 2.100000e-07 67.6
39 TraesCS6D01G388800 chr2D 93.333 45 3 0 2425 2469 2506602 2506646 2.100000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G388800 chr6D 464789915 464793168 3253 True 6010.000000 6010 100.000 1 3254 1 chr6D.!!$R1 3253
1 TraesCS6D01G388800 chr6D 464797405 464799687 2282 True 1463.000000 1463 78.963 837 3059 1 chr6D.!!$R2 2222
2 TraesCS6D01G388800 chr6D 21705990 21709479 3489 True 623.000000 658 80.353 977 3050 2 chr6D.!!$R3 2073
3 TraesCS6D01G388800 chr6B 708728797 708731080 2283 True 2241.000000 2241 84.991 836 3059 1 chr6B.!!$R1 2223
4 TraesCS6D01G388800 chr6B 708721923 708724569 2646 True 1529.500000 1954 87.442 336 3089 2 chr6B.!!$R2 2753
5 TraesCS6D01G388800 chr6A 611335742 611338490 2748 True 806.666667 1328 88.426 907 3084 3 chr6A.!!$R4 2177
6 TraesCS6D01G388800 chr6A 21337104 21337837 733 True 614.000000 614 82.289 2220 2929 1 chr6A.!!$R2 709
7 TraesCS6D01G388800 chr6A 7008614 7009385 771 True 215.000000 215 72.265 1027 1794 1 chr6A.!!$R1 767
8 TraesCS6D01G388800 chr2A 765174859 765175567 708 True 248.000000 248 73.427 1017 1716 1 chr2A.!!$R1 699
9 TraesCS6D01G388800 chr2B 798825658 798826365 707 True 226.000000 226 72.829 1017 1716 1 chr2B.!!$R1 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
144 145 0.168128 CGATGTTGCGGGGAAGAAAC 59.832 55.0 0.0 0.0 0.00 2.78 F
145 146 0.168128 GATGTTGCGGGGAAGAAACG 59.832 55.0 0.0 0.0 32.31 3.60 F
146 147 0.250553 ATGTTGCGGGGAAGAAACGA 60.251 50.0 0.0 0.0 32.31 3.85 F
196 197 0.255890 TTCAGCAATGAGTAGGCCCC 59.744 55.0 0.0 0.0 0.00 5.80 F
198 199 0.257039 CAGCAATGAGTAGGCCCCTT 59.743 55.0 0.0 0.0 0.00 3.95 F
459 460 0.390860 AGTTGCAGAGCAGTTCGTCT 59.609 50.0 0.0 0.0 40.61 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1631 1661 1.902938 TGCACGACATTCAAATCCCA 58.097 45.000 0.0 0.0 0.00 4.37 R
1830 3422 2.942376 TGTTTGTTCGTGCAACAGAGAT 59.058 40.909 0.0 0.0 45.98 2.75 R
1874 3468 6.687081 TTCTTGTTTGTGTTTCTTACGGAT 57.313 33.333 0.0 0.0 0.00 4.18 R
2170 3777 5.637810 TCAAGTATCTGCCAAAGAGTTAACG 59.362 40.000 0.0 0.0 38.67 3.18 R
2171 3778 7.617041 ATCAAGTATCTGCCAAAGAGTTAAC 57.383 36.000 0.0 0.0 38.67 2.01 R
2326 3958 1.550524 AGTCTTCATCGCTAAGTGGCA 59.449 47.619 0.0 0.0 0.00 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 7.604657 ACTGAGTTAGAGTATCCAAATAGGG 57.395 40.000 0.00 0.00 38.24 3.53
50 51 7.133483 ACTGAGTTAGAGTATCCAAATAGGGT 58.867 38.462 0.00 0.00 38.24 4.34
51 52 7.288158 ACTGAGTTAGAGTATCCAAATAGGGTC 59.712 40.741 0.00 0.00 38.24 4.46
52 53 7.363031 TGAGTTAGAGTATCCAAATAGGGTCT 58.637 38.462 0.00 0.00 38.24 3.85
53 54 7.844779 TGAGTTAGAGTATCCAAATAGGGTCTT 59.155 37.037 0.00 0.00 38.24 3.01
54 55 8.625467 AGTTAGAGTATCCAAATAGGGTCTTT 57.375 34.615 0.00 0.00 38.24 2.52
55 56 8.487028 AGTTAGAGTATCCAAATAGGGTCTTTG 58.513 37.037 0.00 0.00 38.24 2.77
56 57 6.893020 AGAGTATCCAAATAGGGTCTTTGT 57.107 37.500 0.00 0.00 38.24 2.83
57 58 6.653989 AGAGTATCCAAATAGGGTCTTTGTG 58.346 40.000 0.00 0.00 38.24 3.33
58 59 6.443849 AGAGTATCCAAATAGGGTCTTTGTGA 59.556 38.462 0.00 0.00 38.24 3.58
59 60 7.127955 AGAGTATCCAAATAGGGTCTTTGTGAT 59.872 37.037 0.00 0.00 38.24 3.06
60 61 7.056635 AGTATCCAAATAGGGTCTTTGTGATG 58.943 38.462 0.00 0.00 38.24 3.07
61 62 5.255397 TCCAAATAGGGTCTTTGTGATGT 57.745 39.130 0.00 0.00 38.24 3.06
62 63 5.009631 TCCAAATAGGGTCTTTGTGATGTG 58.990 41.667 0.00 0.00 38.24 3.21
63 64 4.766891 CCAAATAGGGTCTTTGTGATGTGT 59.233 41.667 0.00 0.00 32.83 3.72
64 65 5.243730 CCAAATAGGGTCTTTGTGATGTGTT 59.756 40.000 0.00 0.00 32.83 3.32
65 66 6.381801 CAAATAGGGTCTTTGTGATGTGTTC 58.618 40.000 0.00 0.00 0.00 3.18
66 67 2.494059 AGGGTCTTTGTGATGTGTTCG 58.506 47.619 0.00 0.00 0.00 3.95
67 68 1.535462 GGGTCTTTGTGATGTGTTCGG 59.465 52.381 0.00 0.00 0.00 4.30
68 69 1.535462 GGTCTTTGTGATGTGTTCGGG 59.465 52.381 0.00 0.00 0.00 5.14
69 70 2.218603 GTCTTTGTGATGTGTTCGGGT 58.781 47.619 0.00 0.00 0.00 5.28
70 71 2.616842 GTCTTTGTGATGTGTTCGGGTT 59.383 45.455 0.00 0.00 0.00 4.11
71 72 3.810941 GTCTTTGTGATGTGTTCGGGTTA 59.189 43.478 0.00 0.00 0.00 2.85
72 73 4.062293 TCTTTGTGATGTGTTCGGGTTAG 58.938 43.478 0.00 0.00 0.00 2.34
73 74 3.478857 TTGTGATGTGTTCGGGTTAGT 57.521 42.857 0.00 0.00 0.00 2.24
74 75 3.478857 TGTGATGTGTTCGGGTTAGTT 57.521 42.857 0.00 0.00 0.00 2.24
75 76 3.811083 TGTGATGTGTTCGGGTTAGTTT 58.189 40.909 0.00 0.00 0.00 2.66
76 77 4.958509 TGTGATGTGTTCGGGTTAGTTTA 58.041 39.130 0.00 0.00 0.00 2.01
77 78 4.992319 TGTGATGTGTTCGGGTTAGTTTAG 59.008 41.667 0.00 0.00 0.00 1.85
78 79 4.390909 GTGATGTGTTCGGGTTAGTTTAGG 59.609 45.833 0.00 0.00 0.00 2.69
79 80 2.769893 TGTGTTCGGGTTAGTTTAGGC 58.230 47.619 0.00 0.00 0.00 3.93
80 81 1.728425 GTGTTCGGGTTAGTTTAGGCG 59.272 52.381 0.00 0.00 0.00 5.52
81 82 1.344114 TGTTCGGGTTAGTTTAGGCGT 59.656 47.619 0.00 0.00 0.00 5.68
82 83 2.560542 TGTTCGGGTTAGTTTAGGCGTA 59.439 45.455 0.00 0.00 0.00 4.42
83 84 3.182182 GTTCGGGTTAGTTTAGGCGTAG 58.818 50.000 0.00 0.00 0.00 3.51
101 102 5.900339 CGTAGCAGAGTAGACTTCTCTAG 57.100 47.826 10.91 7.48 39.84 2.43
102 103 5.353938 CGTAGCAGAGTAGACTTCTCTAGT 58.646 45.833 10.91 4.87 39.84 2.57
103 104 5.813672 CGTAGCAGAGTAGACTTCTCTAGTT 59.186 44.000 10.91 7.06 39.84 2.24
104 105 6.314400 CGTAGCAGAGTAGACTTCTCTAGTTT 59.686 42.308 10.91 1.59 39.84 2.66
105 106 6.509418 AGCAGAGTAGACTTCTCTAGTTTG 57.491 41.667 10.91 1.94 39.84 2.93
106 107 5.417580 AGCAGAGTAGACTTCTCTAGTTTGG 59.582 44.000 10.91 0.47 39.84 3.28
107 108 5.184287 GCAGAGTAGACTTCTCTAGTTTGGT 59.816 44.000 10.91 0.00 39.84 3.67
108 109 6.294843 GCAGAGTAGACTTCTCTAGTTTGGTT 60.295 42.308 10.91 0.00 39.84 3.67
109 110 7.094291 GCAGAGTAGACTTCTCTAGTTTGGTTA 60.094 40.741 10.91 0.00 39.84 2.85
110 111 8.794553 CAGAGTAGACTTCTCTAGTTTGGTTAA 58.205 37.037 10.91 0.00 39.84 2.01
111 112 9.536510 AGAGTAGACTTCTCTAGTTTGGTTAAT 57.463 33.333 9.69 0.00 40.02 1.40
116 117 9.067986 AGACTTCTCTAGTTTGGTTAATTTTGG 57.932 33.333 0.00 0.00 37.17 3.28
117 118 8.762481 ACTTCTCTAGTTTGGTTAATTTTGGT 57.238 30.769 0.00 0.00 31.29 3.67
118 119 8.847196 ACTTCTCTAGTTTGGTTAATTTTGGTC 58.153 33.333 0.00 0.00 31.29 4.02
119 120 8.990163 TTCTCTAGTTTGGTTAATTTTGGTCT 57.010 30.769 0.00 0.00 0.00 3.85
120 121 8.617290 TCTCTAGTTTGGTTAATTTTGGTCTC 57.383 34.615 0.00 0.00 0.00 3.36
121 122 7.664318 TCTCTAGTTTGGTTAATTTTGGTCTCC 59.336 37.037 0.00 0.00 0.00 3.71
122 123 5.801531 AGTTTGGTTAATTTTGGTCTCCC 57.198 39.130 0.00 0.00 0.00 4.30
123 124 5.464069 AGTTTGGTTAATTTTGGTCTCCCT 58.536 37.500 0.00 0.00 0.00 4.20
124 125 5.304357 AGTTTGGTTAATTTTGGTCTCCCTG 59.696 40.000 0.00 0.00 0.00 4.45
125 126 3.161866 TGGTTAATTTTGGTCTCCCTGC 58.838 45.455 0.00 0.00 0.00 4.85
126 127 2.163613 GGTTAATTTTGGTCTCCCTGCG 59.836 50.000 0.00 0.00 0.00 5.18
127 128 3.078837 GTTAATTTTGGTCTCCCTGCGA 58.921 45.455 0.00 0.00 0.00 5.10
128 129 2.514458 AATTTTGGTCTCCCTGCGAT 57.486 45.000 0.00 0.00 0.00 4.58
129 130 1.755179 ATTTTGGTCTCCCTGCGATG 58.245 50.000 0.00 0.00 0.00 3.84
130 131 0.400213 TTTTGGTCTCCCTGCGATGT 59.600 50.000 0.00 0.00 0.00 3.06
131 132 0.400213 TTTGGTCTCCCTGCGATGTT 59.600 50.000 0.00 0.00 0.00 2.71
132 133 0.321564 TTGGTCTCCCTGCGATGTTG 60.322 55.000 0.00 0.00 0.00 3.33
133 134 2.109126 GGTCTCCCTGCGATGTTGC 61.109 63.158 0.00 0.00 0.00 4.17
134 135 2.125552 TCTCCCTGCGATGTTGCG 60.126 61.111 0.00 0.00 37.81 4.85
135 136 3.197790 CTCCCTGCGATGTTGCGG 61.198 66.667 0.00 0.00 41.02 5.69
139 140 2.745884 CTGCGATGTTGCGGGGAA 60.746 61.111 0.00 0.00 37.59 3.97
140 141 2.745884 TGCGATGTTGCGGGGAAG 60.746 61.111 0.00 0.00 37.81 3.46
141 142 2.435938 GCGATGTTGCGGGGAAGA 60.436 61.111 0.00 0.00 0.00 2.87
142 143 2.038269 GCGATGTTGCGGGGAAGAA 61.038 57.895 0.00 0.00 0.00 2.52
143 144 1.582610 GCGATGTTGCGGGGAAGAAA 61.583 55.000 0.00 0.00 0.00 2.52
144 145 0.168128 CGATGTTGCGGGGAAGAAAC 59.832 55.000 0.00 0.00 0.00 2.78
145 146 0.168128 GATGTTGCGGGGAAGAAACG 59.832 55.000 0.00 0.00 32.31 3.60
146 147 0.250553 ATGTTGCGGGGAAGAAACGA 60.251 50.000 0.00 0.00 32.31 3.85
147 148 0.464013 TGTTGCGGGGAAGAAACGAA 60.464 50.000 0.00 0.00 32.31 3.85
148 149 0.664224 GTTGCGGGGAAGAAACGAAA 59.336 50.000 0.00 0.00 0.00 3.46
149 150 0.948678 TTGCGGGGAAGAAACGAAAG 59.051 50.000 0.00 0.00 0.00 2.62
167 168 7.400599 ACGAAAGTGAGGTATACATTACAGA 57.599 36.000 13.92 0.00 46.97 3.41
168 169 7.833786 ACGAAAGTGAGGTATACATTACAGAA 58.166 34.615 13.92 0.00 46.97 3.02
169 170 7.758528 ACGAAAGTGAGGTATACATTACAGAAC 59.241 37.037 13.92 3.17 46.97 3.01
170 171 7.974501 CGAAAGTGAGGTATACATTACAGAACT 59.025 37.037 13.92 0.00 0.00 3.01
171 172 9.303537 GAAAGTGAGGTATACATTACAGAACTC 57.696 37.037 13.92 4.58 0.00 3.01
172 173 8.596781 AAGTGAGGTATACATTACAGAACTCT 57.403 34.615 13.92 0.00 0.00 3.24
173 174 8.596781 AGTGAGGTATACATTACAGAACTCTT 57.403 34.615 13.92 0.00 0.00 2.85
174 175 8.688151 AGTGAGGTATACATTACAGAACTCTTC 58.312 37.037 13.92 2.95 0.00 2.87
175 176 8.467598 GTGAGGTATACATTACAGAACTCTTCA 58.532 37.037 7.49 0.00 0.00 3.02
176 177 9.031537 TGAGGTATACATTACAGAACTCTTCAA 57.968 33.333 5.01 0.00 0.00 2.69
182 183 7.138692 ACATTACAGAACTCTTCAATTCAGC 57.861 36.000 0.00 0.00 0.00 4.26
183 184 6.712095 ACATTACAGAACTCTTCAATTCAGCA 59.288 34.615 0.00 0.00 0.00 4.41
184 185 7.229306 ACATTACAGAACTCTTCAATTCAGCAA 59.771 33.333 0.00 0.00 0.00 3.91
185 186 7.750229 TTACAGAACTCTTCAATTCAGCAAT 57.250 32.000 0.00 0.00 0.00 3.56
186 187 6.010294 ACAGAACTCTTCAATTCAGCAATG 57.990 37.500 0.00 0.00 0.00 2.82
187 188 5.766670 ACAGAACTCTTCAATTCAGCAATGA 59.233 36.000 0.00 0.00 0.00 2.57
188 189 6.072618 ACAGAACTCTTCAATTCAGCAATGAG 60.073 38.462 0.00 0.00 0.00 2.90
189 190 6.002704 AGAACTCTTCAATTCAGCAATGAGT 58.997 36.000 0.00 0.00 35.40 3.41
190 191 7.118825 CAGAACTCTTCAATTCAGCAATGAGTA 59.881 37.037 0.00 0.00 33.82 2.59
191 192 6.981762 ACTCTTCAATTCAGCAATGAGTAG 57.018 37.500 0.00 0.00 32.64 2.57
192 193 5.879223 ACTCTTCAATTCAGCAATGAGTAGG 59.121 40.000 0.00 0.00 32.64 3.18
193 194 4.637534 TCTTCAATTCAGCAATGAGTAGGC 59.362 41.667 0.00 0.00 0.00 3.93
194 195 3.282021 TCAATTCAGCAATGAGTAGGCC 58.718 45.455 0.00 0.00 0.00 5.19
195 196 2.355010 ATTCAGCAATGAGTAGGCCC 57.645 50.000 0.00 0.00 0.00 5.80
196 197 0.255890 TTCAGCAATGAGTAGGCCCC 59.744 55.000 0.00 0.00 0.00 5.80
197 198 0.621571 TCAGCAATGAGTAGGCCCCT 60.622 55.000 0.00 0.00 0.00 4.79
198 199 0.257039 CAGCAATGAGTAGGCCCCTT 59.743 55.000 0.00 0.00 0.00 3.95
199 200 1.002857 AGCAATGAGTAGGCCCCTTT 58.997 50.000 0.00 0.00 0.00 3.11
200 201 2.092429 CAGCAATGAGTAGGCCCCTTTA 60.092 50.000 0.00 0.00 0.00 1.85
201 202 2.785857 AGCAATGAGTAGGCCCCTTTAT 59.214 45.455 0.00 0.00 0.00 1.40
202 203 3.980698 AGCAATGAGTAGGCCCCTTTATA 59.019 43.478 0.00 0.00 0.00 0.98
203 204 4.603610 AGCAATGAGTAGGCCCCTTTATAT 59.396 41.667 0.00 0.00 0.00 0.86
204 205 5.790618 AGCAATGAGTAGGCCCCTTTATATA 59.209 40.000 0.00 0.00 0.00 0.86
205 206 6.448387 AGCAATGAGTAGGCCCCTTTATATAT 59.552 38.462 0.00 0.00 0.00 0.86
206 207 7.627697 AGCAATGAGTAGGCCCCTTTATATATA 59.372 37.037 0.00 0.00 0.00 0.86
207 208 8.440771 GCAATGAGTAGGCCCCTTTATATATAT 58.559 37.037 0.00 0.00 0.00 0.86
226 227 7.944729 ATATATAAAAATGATCCTGCCGCTT 57.055 32.000 0.00 0.00 0.00 4.68
227 228 6.655078 ATATAAAAATGATCCTGCCGCTTT 57.345 33.333 0.00 0.00 0.00 3.51
228 229 2.947448 AAAATGATCCTGCCGCTTTC 57.053 45.000 0.00 0.00 0.00 2.62
229 230 1.106285 AAATGATCCTGCCGCTTTCC 58.894 50.000 0.00 0.00 0.00 3.13
230 231 0.257039 AATGATCCTGCCGCTTTCCT 59.743 50.000 0.00 0.00 0.00 3.36
231 232 1.131638 ATGATCCTGCCGCTTTCCTA 58.868 50.000 0.00 0.00 0.00 2.94
232 233 0.465705 TGATCCTGCCGCTTTCCTAG 59.534 55.000 0.00 0.00 0.00 3.02
233 234 0.882484 GATCCTGCCGCTTTCCTAGC 60.882 60.000 0.00 0.00 46.83 3.42
248 249 4.527509 TCCTAGCATGTAAGCATCTAGC 57.472 45.455 0.00 0.00 46.19 3.42
257 258 4.806571 GCATCTAGCGACGTTCCA 57.193 55.556 0.00 0.00 0.00 3.53
258 259 3.044809 GCATCTAGCGACGTTCCAA 57.955 52.632 0.00 0.00 0.00 3.53
259 260 0.645868 GCATCTAGCGACGTTCCAAC 59.354 55.000 0.00 0.00 0.00 3.77
260 261 1.736032 GCATCTAGCGACGTTCCAACT 60.736 52.381 0.00 0.00 0.00 3.16
261 262 1.920574 CATCTAGCGACGTTCCAACTG 59.079 52.381 0.00 0.00 0.00 3.16
262 263 1.241165 TCTAGCGACGTTCCAACTGA 58.759 50.000 0.00 0.00 0.00 3.41
263 264 1.610038 TCTAGCGACGTTCCAACTGAA 59.390 47.619 0.00 0.00 0.00 3.02
264 265 2.034939 TCTAGCGACGTTCCAACTGAAA 59.965 45.455 0.00 0.00 33.94 2.69
265 266 1.658994 AGCGACGTTCCAACTGAAAA 58.341 45.000 0.00 0.00 33.94 2.29
266 267 2.011222 AGCGACGTTCCAACTGAAAAA 58.989 42.857 0.00 0.00 33.94 1.94
267 268 2.031683 AGCGACGTTCCAACTGAAAAAG 59.968 45.455 0.00 0.00 33.94 2.27
268 269 2.031191 GCGACGTTCCAACTGAAAAAGA 59.969 45.455 0.00 0.00 33.94 2.52
269 270 3.486209 GCGACGTTCCAACTGAAAAAGAA 60.486 43.478 0.00 0.00 33.94 2.52
270 271 4.654015 CGACGTTCCAACTGAAAAAGAAA 58.346 39.130 0.00 0.00 33.94 2.52
271 272 5.090083 CGACGTTCCAACTGAAAAAGAAAA 58.910 37.500 0.00 0.00 33.94 2.29
272 273 5.569823 CGACGTTCCAACTGAAAAAGAAAAA 59.430 36.000 0.00 0.00 33.94 1.94
297 298 5.885020 AGCATCTAACGACGTATTTAAGC 57.115 39.130 0.00 1.97 0.00 3.09
298 299 5.345702 AGCATCTAACGACGTATTTAAGCA 58.654 37.500 0.00 0.00 0.00 3.91
299 300 5.983720 AGCATCTAACGACGTATTTAAGCAT 59.016 36.000 0.00 0.00 0.00 3.79
300 301 6.144080 AGCATCTAACGACGTATTTAAGCATC 59.856 38.462 0.00 0.00 0.00 3.91
301 302 6.144080 GCATCTAACGACGTATTTAAGCATCT 59.856 38.462 0.00 0.00 0.00 2.90
302 303 7.617528 GCATCTAACGACGTATTTAAGCATCTC 60.618 40.741 0.00 0.00 0.00 2.75
303 304 7.024340 TCTAACGACGTATTTAAGCATCTCT 57.976 36.000 0.00 0.00 0.00 3.10
304 305 7.478322 TCTAACGACGTATTTAAGCATCTCTT 58.522 34.615 0.00 0.00 38.79 2.85
305 306 6.963049 AACGACGTATTTAAGCATCTCTTT 57.037 33.333 0.00 0.00 36.25 2.52
306 307 6.332504 ACGACGTATTTAAGCATCTCTTTG 57.667 37.500 0.00 0.00 36.25 2.77
307 308 5.867716 ACGACGTATTTAAGCATCTCTTTGT 59.132 36.000 0.00 0.00 36.25 2.83
308 309 6.034683 ACGACGTATTTAAGCATCTCTTTGTC 59.965 38.462 0.00 0.00 36.25 3.18
309 310 6.253727 CGACGTATTTAAGCATCTCTTTGTCT 59.746 38.462 0.00 0.00 36.25 3.41
310 311 7.201444 CGACGTATTTAAGCATCTCTTTGTCTT 60.201 37.037 0.00 0.00 36.25 3.01
311 312 7.743104 ACGTATTTAAGCATCTCTTTGTCTTG 58.257 34.615 0.00 0.00 36.25 3.02
312 313 7.148407 ACGTATTTAAGCATCTCTTTGTCTTGG 60.148 37.037 0.00 0.00 36.25 3.61
313 314 5.964958 TTTAAGCATCTCTTTGTCTTGGG 57.035 39.130 0.00 0.00 36.25 4.12
314 315 3.795688 AAGCATCTCTTTGTCTTGGGA 57.204 42.857 0.00 0.00 0.00 4.37
315 316 3.347077 AGCATCTCTTTGTCTTGGGAG 57.653 47.619 0.00 0.00 0.00 4.30
316 317 2.909006 AGCATCTCTTTGTCTTGGGAGA 59.091 45.455 0.00 0.00 38.85 3.71
317 318 3.055240 AGCATCTCTTTGTCTTGGGAGAG 60.055 47.826 0.00 0.00 38.08 3.20
318 319 3.055530 GCATCTCTTTGTCTTGGGAGAGA 60.056 47.826 4.59 4.59 46.04 3.10
319 320 4.564406 GCATCTCTTTGTCTTGGGAGAGAA 60.564 45.833 6.07 0.00 45.37 2.87
320 321 4.608948 TCTCTTTGTCTTGGGAGAGAAC 57.391 45.455 0.00 0.00 41.05 3.01
321 322 3.967326 TCTCTTTGTCTTGGGAGAGAACA 59.033 43.478 0.00 0.00 41.05 3.18
322 323 4.039730 TCTCTTTGTCTTGGGAGAGAACAG 59.960 45.833 0.00 0.00 41.05 3.16
323 324 3.967326 TCTTTGTCTTGGGAGAGAACAGA 59.033 43.478 0.00 0.00 35.17 3.41
324 325 4.408921 TCTTTGTCTTGGGAGAGAACAGAA 59.591 41.667 0.00 0.00 35.17 3.02
325 326 4.771114 TTGTCTTGGGAGAGAACAGAAA 57.229 40.909 0.00 0.00 30.90 2.52
326 327 4.771114 TGTCTTGGGAGAGAACAGAAAA 57.229 40.909 0.00 0.00 31.07 2.29
327 328 5.110814 TGTCTTGGGAGAGAACAGAAAAA 57.889 39.130 0.00 0.00 31.07 1.94
328 329 5.694995 TGTCTTGGGAGAGAACAGAAAAAT 58.305 37.500 0.00 0.00 31.07 1.82
329 330 6.837312 TGTCTTGGGAGAGAACAGAAAAATA 58.163 36.000 0.00 0.00 31.07 1.40
330 331 7.287061 TGTCTTGGGAGAGAACAGAAAAATAA 58.713 34.615 0.00 0.00 31.07 1.40
331 332 7.944554 TGTCTTGGGAGAGAACAGAAAAATAAT 59.055 33.333 0.00 0.00 31.07 1.28
332 333 9.449719 GTCTTGGGAGAGAACAGAAAAATAATA 57.550 33.333 0.00 0.00 31.07 0.98
333 334 9.672673 TCTTGGGAGAGAACAGAAAAATAATAG 57.327 33.333 0.00 0.00 0.00 1.73
334 335 9.454859 CTTGGGAGAGAACAGAAAAATAATAGT 57.545 33.333 0.00 0.00 0.00 2.12
351 352 9.803507 AAATAATAGTATTAAGGGGTGCTTACC 57.196 33.333 6.69 0.00 29.41 2.85
355 356 4.654724 AGTATTAAGGGGTGCTTACCTCTC 59.345 45.833 0.00 0.00 40.35 3.20
364 365 1.770658 TGCTTACCTCTCATCCATGGG 59.229 52.381 13.02 0.00 0.00 4.00
402 403 2.370189 CACCAACTCTCCTTGACTCCTT 59.630 50.000 0.00 0.00 0.00 3.36
404 405 2.634940 CCAACTCTCCTTGACTCCTTCA 59.365 50.000 0.00 0.00 0.00 3.02
459 460 0.390860 AGTTGCAGAGCAGTTCGTCT 59.609 50.000 0.00 0.00 40.61 4.18
472 473 1.619332 GTTCGTCTCCTTCCCTTCACT 59.381 52.381 0.00 0.00 0.00 3.41
477 478 2.235155 GTCTCCTTCCCTTCACTTCCTC 59.765 54.545 0.00 0.00 0.00 3.71
479 480 0.977395 CCTTCCCTTCACTTCCTCGT 59.023 55.000 0.00 0.00 0.00 4.18
534 535 2.338620 CAGCTGGTCGTGTTCCGA 59.661 61.111 5.57 0.00 45.00 4.55
699 700 9.553064 GCTCACATAATCATATAGGATTAAGGG 57.447 37.037 20.30 17.63 41.60 3.95
712 713 6.613153 AGGATTAAGGGTGACTAGATATGC 57.387 41.667 0.00 0.00 0.00 3.14
713 714 6.084738 AGGATTAAGGGTGACTAGATATGCA 58.915 40.000 0.00 0.00 0.00 3.96
714 715 6.558775 AGGATTAAGGGTGACTAGATATGCAA 59.441 38.462 0.00 0.00 0.00 4.08
761 762 2.501316 TCTTCTCATTTCTCCGCCATGA 59.499 45.455 0.00 0.00 0.00 3.07
773 774 2.026641 CCGCCATGAATCAACCAATCT 58.973 47.619 0.00 0.00 0.00 2.40
775 776 2.797087 CGCCATGAATCAACCAATCTGC 60.797 50.000 0.00 0.00 0.00 4.26
781 782 4.873817 TGAATCAACCAATCTGCAACAAG 58.126 39.130 0.00 0.00 0.00 3.16
901 906 3.000925 CGTACATCGGTATTCAGTTTGCC 59.999 47.826 0.00 0.00 35.71 4.52
959 965 0.602372 GGCCGAATCAGATCTGGAGC 60.602 60.000 22.42 16.33 0.00 4.70
991 1003 7.903995 TTTTGTTTCTGAAGCAAAGAACAAT 57.096 28.000 24.52 0.00 33.46 2.71
1059 1071 4.394920 GCCATGAAACCTGTTCTCGATAAA 59.605 41.667 0.00 0.00 0.00 1.40
1105 1117 4.275936 AGTTCTCCAAGATGAAAAACGTGG 59.724 41.667 0.00 0.00 37.09 4.94
1202 1217 4.579869 GAGCTAGATCCACAAACCAAGAA 58.420 43.478 0.00 0.00 0.00 2.52
1266 1281 0.461870 TCATTGATGACTTCGGCCGG 60.462 55.000 27.83 13.23 0.00 6.13
1425 1451 5.064198 GCGCAACAGGTATAAGTTCAATACA 59.936 40.000 0.30 0.00 32.49 2.29
1524 1554 2.185350 CCAACCGATGAGCTCGCT 59.815 61.111 9.64 0.00 46.25 4.93
1626 1656 0.873054 ACGAGATATACCGTCAGCCG 59.127 55.000 0.00 0.00 33.23 5.52
1663 1693 0.888736 TCGTGCATTTGTCCCAGTGG 60.889 55.000 0.63 0.63 0.00 4.00
1683 1713 1.134946 GCGCAAAAGCATAACATCCCT 59.865 47.619 0.30 0.00 37.05 4.20
1689 1719 6.036470 GCAAAAGCATAACATCCCTAAACTC 58.964 40.000 0.00 0.00 0.00 3.01
1698 1728 3.069729 ACATCCCTAAACTCATCCGTAGC 59.930 47.826 0.00 0.00 0.00 3.58
1716 1746 5.067413 CCGTAGCTTACTATCTCAACTTGGA 59.933 44.000 0.00 0.00 0.00 3.53
1721 1751 6.014156 AGCTTACTATCTCAACTTGGAAGTGT 60.014 38.462 0.00 0.00 39.66 3.55
1724 1754 8.645814 TTACTATCTCAACTTGGAAGTGTAGA 57.354 34.615 6.56 6.56 39.66 2.59
1726 1756 7.379750 ACTATCTCAACTTGGAAGTGTAGAAC 58.620 38.462 7.71 0.00 39.66 3.01
1738 1768 6.208007 TGGAAGTGTAGAACGTTCTCTTGATA 59.792 38.462 32.86 12.98 38.70 2.15
1739 1769 7.093902 TGGAAGTGTAGAACGTTCTCTTGATAT 60.094 37.037 32.86 14.92 38.70 1.63
1845 3437 2.560981 TGTCCTATCTCTGTTGCACGAA 59.439 45.455 0.00 0.00 0.00 3.85
1859 3451 1.668751 GCACGAACAAACACTCTGGAA 59.331 47.619 0.00 0.00 0.00 3.53
2118 3717 6.964908 TCGTCTATCAATCAGAACTGAGATC 58.035 40.000 10.26 0.00 43.61 2.75
2130 3729 7.392418 TCAGAACTGAGATCTCATTGAACAAT 58.608 34.615 25.30 4.21 39.13 2.71
2170 3777 8.723942 ATTAATCCACTTGACTTGACACTATC 57.276 34.615 0.00 0.00 0.00 2.08
2171 3778 4.174411 TCCACTTGACTTGACACTATCG 57.826 45.455 0.00 0.00 0.00 2.92
2187 3794 5.168569 CACTATCGTTAACTCTTTGGCAGA 58.831 41.667 3.71 0.00 0.00 4.26
2204 3811 7.701539 TTGGCAGATACTTGATTGTAATTGT 57.298 32.000 0.00 0.00 0.00 2.71
2252 3884 3.060615 GGCCTTGGCAGCAGAGTG 61.061 66.667 14.04 0.00 0.00 3.51
2319 3951 6.837312 TCCCATCCTCGTGATTATATTTTGT 58.163 36.000 0.00 0.00 0.00 2.83
2419 4051 4.124238 CGCCAGTTTCGGGATATTTCTAA 58.876 43.478 0.00 0.00 0.00 2.10
2537 4184 6.312529 ACATATACGGGATTCTCTAGGTTCA 58.687 40.000 0.00 0.00 0.00 3.18
2625 4296 2.005370 TGGTATGTATCCCGAGGACC 57.995 55.000 0.00 0.00 32.98 4.46
2661 4332 4.186159 GCATCATTTGGAACTTCAATGGG 58.814 43.478 3.29 0.00 0.00 4.00
2668 4339 0.243636 GAACTTCAATGGGTTGCCGG 59.756 55.000 0.00 0.00 35.26 6.13
2671 4342 0.322456 CTTCAATGGGTTGCCGGAGA 60.322 55.000 5.05 0.00 35.26 3.71
2702 4947 8.660295 TTAGTAAAGAGAAGGGACAAGATGTA 57.340 34.615 0.00 0.00 0.00 2.29
2804 5049 3.115554 GGTCACACATTGCAAAGTTCAC 58.884 45.455 4.22 2.18 0.00 3.18
2840 5085 5.460419 CGATCTTATCTTGTCTAAGTGTGCC 59.540 44.000 0.00 0.00 35.38 5.01
2843 5088 2.433868 TCTTGTCTAAGTGTGCCGAC 57.566 50.000 0.00 0.00 35.38 4.79
2886 5131 0.325933 TGACCCTCAAGCCATCACAG 59.674 55.000 0.00 0.00 0.00 3.66
2900 5145 4.641989 GCCATCACAGAACTGGATAACAAT 59.358 41.667 6.76 0.00 34.19 2.71
2923 5168 1.884444 GTCGACTGTCTCTCCACCC 59.116 63.158 8.70 0.00 0.00 4.61
2930 5178 0.252057 TGTCTCTCCACCCGGATGAA 60.252 55.000 0.73 0.00 41.79 2.57
2941 5192 4.887071 CCACCCGGATGAAGAAATTATTGA 59.113 41.667 0.73 0.00 0.00 2.57
2964 5215 8.024145 TGAAACAAAGTTATGGGGTAACATTT 57.976 30.769 1.38 0.00 44.18 2.32
3035 5286 1.423395 CTCCTCTGCGACTGTTCAAC 58.577 55.000 0.00 0.00 0.00 3.18
3052 5303 1.457303 CAACTTCCTTCGAGTTCTGCG 59.543 52.381 0.00 0.00 35.26 5.18
3064 5315 5.854157 TCGAGTTCTGCGTATTGAAAATTC 58.146 37.500 0.00 0.00 0.00 2.17
3071 5322 6.554419 TCTGCGTATTGAAAATTCTGGATTG 58.446 36.000 0.00 0.00 0.00 2.67
3075 5326 6.418819 GCGTATTGAAAATTCTGGATTGGATG 59.581 38.462 0.00 0.00 0.00 3.51
3089 5340 1.728323 TGGATGGAGTTGACCTCACA 58.272 50.000 0.00 0.00 42.40 3.58
3090 5341 1.347707 TGGATGGAGTTGACCTCACAC 59.652 52.381 0.00 0.00 42.40 3.82
3091 5342 1.625818 GGATGGAGTTGACCTCACACT 59.374 52.381 0.00 0.00 42.40 3.55
3092 5343 2.832129 GGATGGAGTTGACCTCACACTA 59.168 50.000 0.00 0.00 42.40 2.74
3093 5344 3.118956 GGATGGAGTTGACCTCACACTAG 60.119 52.174 0.00 0.00 42.40 2.57
3094 5345 2.958818 TGGAGTTGACCTCACACTAGT 58.041 47.619 0.00 0.00 42.40 2.57
3096 5347 2.610727 GGAGTTGACCTCACACTAGTGC 60.611 54.545 22.90 5.90 45.49 4.40
3097 5348 2.035961 GAGTTGACCTCACACTAGTGCA 59.964 50.000 22.90 8.57 45.49 4.57
3098 5349 2.036475 AGTTGACCTCACACTAGTGCAG 59.964 50.000 22.90 17.47 45.49 4.41
3099 5350 1.995376 TGACCTCACACTAGTGCAGA 58.005 50.000 22.90 18.59 45.49 4.26
3100 5351 2.316108 TGACCTCACACTAGTGCAGAA 58.684 47.619 22.90 4.98 45.49 3.02
3101 5352 2.035961 TGACCTCACACTAGTGCAGAAC 59.964 50.000 22.90 14.48 45.49 3.01
3102 5353 2.035961 GACCTCACACTAGTGCAGAACA 59.964 50.000 22.90 0.00 45.49 3.18
3103 5354 2.036475 ACCTCACACTAGTGCAGAACAG 59.964 50.000 22.90 13.55 45.49 3.16
3104 5355 2.611473 CCTCACACTAGTGCAGAACAGG 60.611 54.545 22.90 13.78 45.49 4.00
3105 5356 1.151668 CACACTAGTGCAGAACAGGC 58.848 55.000 22.90 0.00 39.21 4.85
3106 5357 0.035458 ACACTAGTGCAGAACAGGCC 59.965 55.000 22.90 0.00 0.00 5.19
3107 5358 0.322975 CACTAGTGCAGAACAGGCCT 59.677 55.000 10.54 0.00 0.00 5.19
3108 5359 1.059913 ACTAGTGCAGAACAGGCCTT 58.940 50.000 0.00 0.00 0.00 4.35
3109 5360 1.421646 ACTAGTGCAGAACAGGCCTTT 59.578 47.619 0.00 0.20 0.00 3.11
3110 5361 2.637872 ACTAGTGCAGAACAGGCCTTTA 59.362 45.455 0.00 0.00 0.00 1.85
3111 5362 2.887151 AGTGCAGAACAGGCCTTTAT 57.113 45.000 0.00 0.00 0.00 1.40
3112 5363 2.716217 AGTGCAGAACAGGCCTTTATC 58.284 47.619 0.00 1.00 0.00 1.75
3113 5364 2.040278 AGTGCAGAACAGGCCTTTATCA 59.960 45.455 0.00 0.00 0.00 2.15
3114 5365 2.162408 GTGCAGAACAGGCCTTTATCAC 59.838 50.000 0.00 3.03 0.00 3.06
3115 5366 1.745653 GCAGAACAGGCCTTTATCACC 59.254 52.381 0.00 0.00 0.00 4.02
3116 5367 2.009774 CAGAACAGGCCTTTATCACCG 58.990 52.381 0.00 0.00 0.00 4.94
3117 5368 1.065418 AGAACAGGCCTTTATCACCGG 60.065 52.381 0.00 0.00 0.00 5.28
3118 5369 0.696501 AACAGGCCTTTATCACCGGT 59.303 50.000 0.00 0.00 33.01 5.28
3119 5370 0.696501 ACAGGCCTTTATCACCGGTT 59.303 50.000 2.97 0.00 0.00 4.44
3120 5371 1.339727 ACAGGCCTTTATCACCGGTTC 60.340 52.381 2.97 0.00 0.00 3.62
3121 5372 0.107848 AGGCCTTTATCACCGGTTCG 60.108 55.000 2.97 0.00 0.00 3.95
3122 5373 0.392060 GGCCTTTATCACCGGTTCGT 60.392 55.000 2.97 0.00 0.00 3.85
3123 5374 1.134729 GGCCTTTATCACCGGTTCGTA 60.135 52.381 2.97 0.00 0.00 3.43
3124 5375 2.620242 GCCTTTATCACCGGTTCGTAA 58.380 47.619 2.97 1.17 0.00 3.18
3125 5376 2.606272 GCCTTTATCACCGGTTCGTAAG 59.394 50.000 2.97 6.83 0.00 2.34
3126 5377 3.192466 CCTTTATCACCGGTTCGTAAGG 58.808 50.000 2.97 12.48 38.47 2.69
3127 5378 2.965572 TTATCACCGGTTCGTAAGGG 57.034 50.000 2.97 0.00 38.47 3.95
3128 5379 0.461135 TATCACCGGTTCGTAAGGGC 59.539 55.000 2.97 0.00 38.47 5.19
3129 5380 2.248086 ATCACCGGTTCGTAAGGGCC 62.248 60.000 2.97 0.00 38.47 5.80
3130 5381 2.605601 ACCGGTTCGTAAGGGCCT 60.606 61.111 0.00 0.00 38.47 5.19
3131 5382 2.219164 ACCGGTTCGTAAGGGCCTT 61.219 57.895 24.44 24.44 38.47 4.35
3132 5383 1.002990 CCGGTTCGTAAGGGCCTTT 60.003 57.895 26.29 5.08 38.47 3.11
3133 5384 0.249955 CCGGTTCGTAAGGGCCTTTA 59.750 55.000 26.29 2.60 38.47 1.85
3134 5385 1.648504 CGGTTCGTAAGGGCCTTTAG 58.351 55.000 26.29 18.30 38.47 1.85
3135 5386 1.066645 CGGTTCGTAAGGGCCTTTAGT 60.067 52.381 26.29 1.50 38.47 2.24
3136 5387 2.353323 GGTTCGTAAGGGCCTTTAGTG 58.647 52.381 26.29 11.88 38.47 2.74
3137 5388 1.736126 GTTCGTAAGGGCCTTTAGTGC 59.264 52.381 26.29 8.97 38.47 4.40
3143 5394 3.587095 GGCCTTTAGTGCCGGTTC 58.413 61.111 1.90 0.00 39.48 3.62
3144 5395 1.002502 GGCCTTTAGTGCCGGTTCT 60.003 57.895 1.90 4.41 39.48 3.01
3145 5396 1.305930 GGCCTTTAGTGCCGGTTCTG 61.306 60.000 1.90 0.00 39.48 3.02
3146 5397 1.923227 GCCTTTAGTGCCGGTTCTGC 61.923 60.000 1.90 0.00 0.00 4.26
3147 5398 0.605319 CCTTTAGTGCCGGTTCTGCA 60.605 55.000 1.90 0.00 36.12 4.41
3148 5399 1.234821 CTTTAGTGCCGGTTCTGCAA 58.765 50.000 1.90 0.00 41.06 4.08
3149 5400 0.948678 TTTAGTGCCGGTTCTGCAAC 59.051 50.000 1.90 0.00 41.06 4.17
3162 5413 3.813596 GCAACCGGCACTATGGAG 58.186 61.111 0.00 0.00 43.97 3.86
3163 5414 1.819632 GCAACCGGCACTATGGAGG 60.820 63.158 0.00 0.00 43.97 4.30
3164 5415 1.153168 CAACCGGCACTATGGAGGG 60.153 63.158 0.00 0.00 0.00 4.30
3165 5416 2.375345 AACCGGCACTATGGAGGGG 61.375 63.158 0.00 0.00 0.00 4.79
3166 5417 2.445845 CCGGCACTATGGAGGGGA 60.446 66.667 0.00 0.00 0.00 4.81
3167 5418 2.511452 CCGGCACTATGGAGGGGAG 61.511 68.421 0.00 0.00 0.00 4.30
3168 5419 1.457643 CGGCACTATGGAGGGGAGA 60.458 63.158 0.00 0.00 0.00 3.71
3169 5420 1.749334 CGGCACTATGGAGGGGAGAC 61.749 65.000 0.00 0.00 0.00 3.36
3170 5421 0.399233 GGCACTATGGAGGGGAGACT 60.399 60.000 0.00 0.00 0.00 3.24
3171 5422 1.133136 GGCACTATGGAGGGGAGACTA 60.133 57.143 0.00 0.00 0.00 2.59
3172 5423 2.679082 GCACTATGGAGGGGAGACTAA 58.321 52.381 0.00 0.00 0.00 2.24
3173 5424 3.039011 GCACTATGGAGGGGAGACTAAA 58.961 50.000 0.00 0.00 0.00 1.85
3174 5425 3.070302 GCACTATGGAGGGGAGACTAAAG 59.930 52.174 0.00 0.00 0.00 1.85
3175 5426 3.070302 CACTATGGAGGGGAGACTAAAGC 59.930 52.174 0.00 0.00 0.00 3.51
3176 5427 1.512735 ATGGAGGGGAGACTAAAGCC 58.487 55.000 0.00 0.00 0.00 4.35
3177 5428 0.620700 TGGAGGGGAGACTAAAGCCC 60.621 60.000 0.00 0.00 41.28 5.19
3196 5447 0.176449 CCCCCTTTAGTACCGGTTCG 59.824 60.000 15.04 0.00 0.00 3.95
3214 5465 3.416382 GCACGAACCGGCGCTAAA 61.416 61.111 7.64 0.00 33.86 1.85
3215 5466 2.776072 CACGAACCGGCGCTAAAG 59.224 61.111 7.64 0.00 33.86 1.85
3216 5467 2.025418 CACGAACCGGCGCTAAAGT 61.025 57.895 7.64 0.00 33.86 2.66
3217 5468 2.025418 ACGAACCGGCGCTAAAGTG 61.025 57.895 7.64 0.00 33.86 3.16
3224 5475 2.561373 GCGCTAAAGTGCCACCAC 59.439 61.111 0.00 0.00 45.15 4.16
3225 5476 2.860293 CGCTAAAGTGCCACCACG 59.140 61.111 0.00 0.00 46.62 4.94
3226 5477 1.959226 CGCTAAAGTGCCACCACGT 60.959 57.895 0.00 0.00 46.62 4.49
3227 5478 0.668096 CGCTAAAGTGCCACCACGTA 60.668 55.000 0.00 0.00 46.62 3.57
3228 5479 1.076332 GCTAAAGTGCCACCACGTAG 58.924 55.000 0.00 0.00 46.62 3.51
3229 5480 1.076332 CTAAAGTGCCACCACGTAGC 58.924 55.000 0.00 0.00 46.62 3.58
3230 5481 0.393448 TAAAGTGCCACCACGTAGCA 59.607 50.000 0.00 0.00 46.62 3.49
3232 5483 3.411351 GTGCCACCACGTAGCACG 61.411 66.667 13.95 7.07 46.43 5.34
3233 5484 3.607661 TGCCACCACGTAGCACGA 61.608 61.111 14.18 0.00 46.05 4.35
3234 5485 2.809601 GCCACCACGTAGCACGAG 60.810 66.667 14.18 7.27 46.05 4.18
3235 5486 2.809601 CCACCACGTAGCACGAGC 60.810 66.667 14.18 0.00 46.05 5.03
3236 5487 2.809601 CACCACGTAGCACGAGCC 60.810 66.667 14.18 0.00 46.05 4.70
3237 5488 3.299977 ACCACGTAGCACGAGCCA 61.300 61.111 14.18 0.00 46.05 4.75
3238 5489 2.507102 CCACGTAGCACGAGCCAG 60.507 66.667 14.18 0.00 46.05 4.85
3239 5490 2.507102 CACGTAGCACGAGCCAGG 60.507 66.667 14.18 0.00 46.05 4.45
3240 5491 4.436998 ACGTAGCACGAGCCAGGC 62.437 66.667 1.84 1.84 46.05 4.85
3242 5493 4.840005 GTAGCACGAGCCAGGCCC 62.840 72.222 8.22 0.00 43.56 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 9.144298 CCCTATTTGGATACTCTAACTCAGTTA 57.856 37.037 0.00 0.00 38.35 2.24
24 25 7.624077 ACCCTATTTGGATACTCTAACTCAGTT 59.376 37.037 0.00 0.00 38.35 3.16
25 26 7.133483 ACCCTATTTGGATACTCTAACTCAGT 58.867 38.462 0.00 0.00 38.35 3.41
26 27 7.507616 AGACCCTATTTGGATACTCTAACTCAG 59.492 40.741 0.00 0.00 38.35 3.35
27 28 7.363031 AGACCCTATTTGGATACTCTAACTCA 58.637 38.462 0.00 0.00 38.35 3.41
28 29 7.842887 AGACCCTATTTGGATACTCTAACTC 57.157 40.000 0.00 0.00 38.35 3.01
29 30 8.487028 CAAAGACCCTATTTGGATACTCTAACT 58.513 37.037 0.00 0.00 38.35 2.24
30 31 8.265764 ACAAAGACCCTATTTGGATACTCTAAC 58.734 37.037 3.74 0.00 41.05 2.34
31 32 8.265055 CACAAAGACCCTATTTGGATACTCTAA 58.735 37.037 3.74 0.00 41.05 2.10
32 33 7.622081 TCACAAAGACCCTATTTGGATACTCTA 59.378 37.037 3.74 0.00 41.05 2.43
33 34 6.443849 TCACAAAGACCCTATTTGGATACTCT 59.556 38.462 3.74 0.00 41.05 3.24
34 35 6.650120 TCACAAAGACCCTATTTGGATACTC 58.350 40.000 3.74 0.00 41.05 2.59
35 36 6.636454 TCACAAAGACCCTATTTGGATACT 57.364 37.500 3.74 0.00 41.05 2.12
36 37 6.828785 ACATCACAAAGACCCTATTTGGATAC 59.171 38.462 3.74 0.00 41.05 2.24
37 38 6.828273 CACATCACAAAGACCCTATTTGGATA 59.172 38.462 3.74 0.00 41.05 2.59
38 39 5.653769 CACATCACAAAGACCCTATTTGGAT 59.346 40.000 3.74 1.53 41.05 3.41
39 40 5.009631 CACATCACAAAGACCCTATTTGGA 58.990 41.667 3.74 0.00 41.05 3.53
40 41 4.766891 ACACATCACAAAGACCCTATTTGG 59.233 41.667 3.74 0.00 41.05 3.28
41 42 5.964958 ACACATCACAAAGACCCTATTTG 57.035 39.130 0.00 0.00 42.17 2.32
42 43 5.181245 CGAACACATCACAAAGACCCTATTT 59.819 40.000 0.00 0.00 0.00 1.40
43 44 4.695455 CGAACACATCACAAAGACCCTATT 59.305 41.667 0.00 0.00 0.00 1.73
44 45 4.253685 CGAACACATCACAAAGACCCTAT 58.746 43.478 0.00 0.00 0.00 2.57
45 46 3.556213 CCGAACACATCACAAAGACCCTA 60.556 47.826 0.00 0.00 0.00 3.53
46 47 2.494059 CGAACACATCACAAAGACCCT 58.506 47.619 0.00 0.00 0.00 4.34
47 48 1.535462 CCGAACACATCACAAAGACCC 59.465 52.381 0.00 0.00 0.00 4.46
48 49 1.535462 CCCGAACACATCACAAAGACC 59.465 52.381 0.00 0.00 0.00 3.85
49 50 2.218603 ACCCGAACACATCACAAAGAC 58.781 47.619 0.00 0.00 0.00 3.01
50 51 2.631160 ACCCGAACACATCACAAAGA 57.369 45.000 0.00 0.00 0.00 2.52
51 52 3.813166 ACTAACCCGAACACATCACAAAG 59.187 43.478 0.00 0.00 0.00 2.77
52 53 3.811083 ACTAACCCGAACACATCACAAA 58.189 40.909 0.00 0.00 0.00 2.83
53 54 3.478857 ACTAACCCGAACACATCACAA 57.521 42.857 0.00 0.00 0.00 3.33
54 55 3.478857 AACTAACCCGAACACATCACA 57.521 42.857 0.00 0.00 0.00 3.58
55 56 4.390909 CCTAAACTAACCCGAACACATCAC 59.609 45.833 0.00 0.00 0.00 3.06
56 57 4.571919 CCTAAACTAACCCGAACACATCA 58.428 43.478 0.00 0.00 0.00 3.07
57 58 3.373130 GCCTAAACTAACCCGAACACATC 59.627 47.826 0.00 0.00 0.00 3.06
58 59 3.340928 GCCTAAACTAACCCGAACACAT 58.659 45.455 0.00 0.00 0.00 3.21
59 60 2.769893 GCCTAAACTAACCCGAACACA 58.230 47.619 0.00 0.00 0.00 3.72
60 61 1.728425 CGCCTAAACTAACCCGAACAC 59.272 52.381 0.00 0.00 0.00 3.32
61 62 1.344114 ACGCCTAAACTAACCCGAACA 59.656 47.619 0.00 0.00 0.00 3.18
62 63 2.084610 ACGCCTAAACTAACCCGAAC 57.915 50.000 0.00 0.00 0.00 3.95
63 64 2.417243 GCTACGCCTAAACTAACCCGAA 60.417 50.000 0.00 0.00 0.00 4.30
64 65 1.134946 GCTACGCCTAAACTAACCCGA 59.865 52.381 0.00 0.00 0.00 5.14
65 66 1.135024 TGCTACGCCTAAACTAACCCG 60.135 52.381 0.00 0.00 0.00 5.28
66 67 2.167075 TCTGCTACGCCTAAACTAACCC 59.833 50.000 0.00 0.00 0.00 4.11
67 68 3.119209 ACTCTGCTACGCCTAAACTAACC 60.119 47.826 0.00 0.00 0.00 2.85
68 69 4.107363 ACTCTGCTACGCCTAAACTAAC 57.893 45.455 0.00 0.00 0.00 2.34
69 70 5.065731 GTCTACTCTGCTACGCCTAAACTAA 59.934 44.000 0.00 0.00 0.00 2.24
70 71 4.574013 GTCTACTCTGCTACGCCTAAACTA 59.426 45.833 0.00 0.00 0.00 2.24
71 72 3.377798 GTCTACTCTGCTACGCCTAAACT 59.622 47.826 0.00 0.00 0.00 2.66
72 73 3.377798 AGTCTACTCTGCTACGCCTAAAC 59.622 47.826 0.00 0.00 0.00 2.01
73 74 3.618351 AGTCTACTCTGCTACGCCTAAA 58.382 45.455 0.00 0.00 0.00 1.85
74 75 3.278668 AGTCTACTCTGCTACGCCTAA 57.721 47.619 0.00 0.00 0.00 2.69
75 76 3.118334 AGAAGTCTACTCTGCTACGCCTA 60.118 47.826 0.00 0.00 0.00 3.93
76 77 2.018515 GAAGTCTACTCTGCTACGCCT 58.981 52.381 0.00 0.00 0.00 5.52
77 78 2.018515 AGAAGTCTACTCTGCTACGCC 58.981 52.381 0.00 0.00 0.00 5.68
78 79 2.940410 AGAGAAGTCTACTCTGCTACGC 59.060 50.000 0.00 0.00 42.20 4.42
79 80 5.353938 ACTAGAGAAGTCTACTCTGCTACG 58.646 45.833 0.00 0.00 43.37 3.51
80 81 7.414762 CCAAACTAGAGAAGTCTACTCTGCTAC 60.415 44.444 0.00 0.00 43.37 3.58
81 82 6.600032 CCAAACTAGAGAAGTCTACTCTGCTA 59.400 42.308 0.00 0.00 43.37 3.49
82 83 5.417580 CCAAACTAGAGAAGTCTACTCTGCT 59.582 44.000 0.00 0.00 43.37 4.24
83 84 5.184287 ACCAAACTAGAGAAGTCTACTCTGC 59.816 44.000 0.00 0.00 43.37 4.26
84 85 6.827586 ACCAAACTAGAGAAGTCTACTCTG 57.172 41.667 0.00 0.00 43.37 3.35
85 86 8.937207 TTAACCAAACTAGAGAAGTCTACTCT 57.063 34.615 0.00 0.00 45.15 3.24
90 91 9.067986 CCAAAATTAACCAAACTAGAGAAGTCT 57.932 33.333 0.00 0.00 37.50 3.24
91 92 8.847196 ACCAAAATTAACCAAACTAGAGAAGTC 58.153 33.333 0.00 0.00 37.50 3.01
92 93 8.762481 ACCAAAATTAACCAAACTAGAGAAGT 57.238 30.769 0.00 0.00 41.49 3.01
93 94 9.067986 AGACCAAAATTAACCAAACTAGAGAAG 57.932 33.333 0.00 0.00 0.00 2.85
94 95 8.990163 AGACCAAAATTAACCAAACTAGAGAA 57.010 30.769 0.00 0.00 0.00 2.87
95 96 7.664318 GGAGACCAAAATTAACCAAACTAGAGA 59.336 37.037 0.00 0.00 0.00 3.10
96 97 7.817641 GGAGACCAAAATTAACCAAACTAGAG 58.182 38.462 0.00 0.00 0.00 2.43
97 98 7.754851 GGAGACCAAAATTAACCAAACTAGA 57.245 36.000 0.00 0.00 0.00 2.43
116 117 2.456119 CGCAACATCGCAGGGAGAC 61.456 63.158 0.00 0.00 0.00 3.36
117 118 2.125552 CGCAACATCGCAGGGAGA 60.126 61.111 0.00 0.00 0.00 3.71
118 119 3.197790 CCGCAACATCGCAGGGAG 61.198 66.667 0.00 0.00 0.00 4.30
119 120 4.776322 CCCGCAACATCGCAGGGA 62.776 66.667 6.91 0.00 43.88 4.20
121 122 4.776322 TCCCCGCAACATCGCAGG 62.776 66.667 0.00 0.00 0.00 4.85
122 123 2.745884 TTCCCCGCAACATCGCAG 60.746 61.111 0.00 0.00 0.00 5.18
123 124 2.739849 TTCTTCCCCGCAACATCGCA 62.740 55.000 0.00 0.00 0.00 5.10
124 125 1.582610 TTTCTTCCCCGCAACATCGC 61.583 55.000 0.00 0.00 0.00 4.58
125 126 0.168128 GTTTCTTCCCCGCAACATCG 59.832 55.000 0.00 0.00 0.00 3.84
126 127 0.168128 CGTTTCTTCCCCGCAACATC 59.832 55.000 0.00 0.00 0.00 3.06
127 128 0.250553 TCGTTTCTTCCCCGCAACAT 60.251 50.000 0.00 0.00 0.00 2.71
128 129 0.464013 TTCGTTTCTTCCCCGCAACA 60.464 50.000 0.00 0.00 0.00 3.33
129 130 0.664224 TTTCGTTTCTTCCCCGCAAC 59.336 50.000 0.00 0.00 0.00 4.17
130 131 0.948678 CTTTCGTTTCTTCCCCGCAA 59.051 50.000 0.00 0.00 0.00 4.85
131 132 0.179040 ACTTTCGTTTCTTCCCCGCA 60.179 50.000 0.00 0.00 0.00 5.69
132 133 0.237498 CACTTTCGTTTCTTCCCCGC 59.763 55.000 0.00 0.00 0.00 6.13
133 134 1.798813 CTCACTTTCGTTTCTTCCCCG 59.201 52.381 0.00 0.00 0.00 5.73
134 135 2.152016 CCTCACTTTCGTTTCTTCCCC 58.848 52.381 0.00 0.00 0.00 4.81
135 136 2.847441 ACCTCACTTTCGTTTCTTCCC 58.153 47.619 0.00 0.00 0.00 3.97
136 137 6.161381 TGTATACCTCACTTTCGTTTCTTCC 58.839 40.000 0.00 0.00 0.00 3.46
137 138 7.829378 ATGTATACCTCACTTTCGTTTCTTC 57.171 36.000 0.00 0.00 0.00 2.87
138 139 9.148104 GTAATGTATACCTCACTTTCGTTTCTT 57.852 33.333 0.00 0.00 0.00 2.52
139 140 8.308931 TGTAATGTATACCTCACTTTCGTTTCT 58.691 33.333 0.00 0.00 0.00 2.52
140 141 8.470040 TGTAATGTATACCTCACTTTCGTTTC 57.530 34.615 0.00 0.00 0.00 2.78
141 142 8.308931 TCTGTAATGTATACCTCACTTTCGTTT 58.691 33.333 0.00 0.00 0.00 3.60
142 143 7.833786 TCTGTAATGTATACCTCACTTTCGTT 58.166 34.615 0.00 0.00 0.00 3.85
143 144 7.400599 TCTGTAATGTATACCTCACTTTCGT 57.599 36.000 0.00 0.00 0.00 3.85
144 145 7.974501 AGTTCTGTAATGTATACCTCACTTTCG 59.025 37.037 0.00 0.00 0.00 3.46
145 146 9.303537 GAGTTCTGTAATGTATACCTCACTTTC 57.696 37.037 0.00 0.00 0.00 2.62
146 147 9.036980 AGAGTTCTGTAATGTATACCTCACTTT 57.963 33.333 0.00 0.00 0.00 2.66
147 148 8.596781 AGAGTTCTGTAATGTATACCTCACTT 57.403 34.615 0.00 0.00 0.00 3.16
148 149 8.596781 AAGAGTTCTGTAATGTATACCTCACT 57.403 34.615 0.00 0.00 0.00 3.41
149 150 8.467598 TGAAGAGTTCTGTAATGTATACCTCAC 58.532 37.037 0.00 0.00 0.00 3.51
150 151 8.589701 TGAAGAGTTCTGTAATGTATACCTCA 57.410 34.615 0.00 0.00 0.00 3.86
156 157 8.887717 GCTGAATTGAAGAGTTCTGTAATGTAT 58.112 33.333 0.00 0.00 0.00 2.29
157 158 7.877612 TGCTGAATTGAAGAGTTCTGTAATGTA 59.122 33.333 0.00 0.00 0.00 2.29
158 159 6.712095 TGCTGAATTGAAGAGTTCTGTAATGT 59.288 34.615 0.00 0.00 0.00 2.71
159 160 7.137490 TGCTGAATTGAAGAGTTCTGTAATG 57.863 36.000 0.00 0.00 0.00 1.90
160 161 7.750229 TTGCTGAATTGAAGAGTTCTGTAAT 57.250 32.000 0.00 0.00 0.00 1.89
161 162 7.445096 TCATTGCTGAATTGAAGAGTTCTGTAA 59.555 33.333 0.00 0.00 34.44 2.41
162 163 6.936335 TCATTGCTGAATTGAAGAGTTCTGTA 59.064 34.615 0.00 0.00 0.00 2.74
163 164 5.766670 TCATTGCTGAATTGAAGAGTTCTGT 59.233 36.000 0.00 0.00 0.00 3.41
164 165 6.072618 ACTCATTGCTGAATTGAAGAGTTCTG 60.073 38.462 0.00 0.00 31.61 3.02
165 166 6.002704 ACTCATTGCTGAATTGAAGAGTTCT 58.997 36.000 0.00 0.00 31.61 3.01
166 167 6.251655 ACTCATTGCTGAATTGAAGAGTTC 57.748 37.500 0.00 0.00 31.61 3.01
167 168 6.373774 CCTACTCATTGCTGAATTGAAGAGTT 59.626 38.462 0.00 0.00 36.58 3.01
168 169 5.879223 CCTACTCATTGCTGAATTGAAGAGT 59.121 40.000 0.00 0.00 38.50 3.24
169 170 5.220815 GCCTACTCATTGCTGAATTGAAGAG 60.221 44.000 0.00 0.00 0.00 2.85
170 171 4.637534 GCCTACTCATTGCTGAATTGAAGA 59.362 41.667 0.00 0.00 0.00 2.87
171 172 4.201990 GGCCTACTCATTGCTGAATTGAAG 60.202 45.833 0.00 0.00 0.00 3.02
172 173 3.696051 GGCCTACTCATTGCTGAATTGAA 59.304 43.478 0.00 0.00 0.00 2.69
173 174 3.282021 GGCCTACTCATTGCTGAATTGA 58.718 45.455 0.00 0.00 0.00 2.57
174 175 2.360165 GGGCCTACTCATTGCTGAATTG 59.640 50.000 0.84 0.00 0.00 2.32
175 176 2.659428 GGGCCTACTCATTGCTGAATT 58.341 47.619 0.84 0.00 0.00 2.17
176 177 1.133668 GGGGCCTACTCATTGCTGAAT 60.134 52.381 0.84 0.00 0.00 2.57
177 178 0.255890 GGGGCCTACTCATTGCTGAA 59.744 55.000 0.84 0.00 0.00 3.02
178 179 0.621571 AGGGGCCTACTCATTGCTGA 60.622 55.000 0.84 0.00 0.00 4.26
179 180 0.257039 AAGGGGCCTACTCATTGCTG 59.743 55.000 0.84 0.00 0.00 4.41
180 181 1.002857 AAAGGGGCCTACTCATTGCT 58.997 50.000 0.84 0.00 0.00 3.91
181 182 2.729028 TAAAGGGGCCTACTCATTGC 57.271 50.000 0.84 0.00 0.00 3.56
200 201 9.632638 AAGCGGCAGGATCATTTTTATATATAT 57.367 29.630 1.45 0.00 0.00 0.86
201 202 9.461312 AAAGCGGCAGGATCATTTTTATATATA 57.539 29.630 1.45 0.00 0.00 0.86
202 203 7.944729 AAGCGGCAGGATCATTTTTATATAT 57.055 32.000 1.45 0.00 0.00 0.86
203 204 7.094377 GGAAAGCGGCAGGATCATTTTTATATA 60.094 37.037 1.45 0.00 0.00 0.86
204 205 6.294731 GGAAAGCGGCAGGATCATTTTTATAT 60.295 38.462 1.45 0.00 0.00 0.86
205 206 5.009610 GGAAAGCGGCAGGATCATTTTTATA 59.990 40.000 1.45 0.00 0.00 0.98
206 207 4.202151 GGAAAGCGGCAGGATCATTTTTAT 60.202 41.667 1.45 0.00 0.00 1.40
207 208 3.130340 GGAAAGCGGCAGGATCATTTTTA 59.870 43.478 1.45 0.00 0.00 1.52
208 209 2.094026 GGAAAGCGGCAGGATCATTTTT 60.094 45.455 1.45 0.00 0.00 1.94
209 210 1.478105 GGAAAGCGGCAGGATCATTTT 59.522 47.619 1.45 0.00 0.00 1.82
210 211 1.106285 GGAAAGCGGCAGGATCATTT 58.894 50.000 1.45 0.00 0.00 2.32
211 212 0.257039 AGGAAAGCGGCAGGATCATT 59.743 50.000 1.45 0.00 0.00 2.57
212 213 1.071385 CTAGGAAAGCGGCAGGATCAT 59.929 52.381 1.45 0.00 0.00 2.45
213 214 0.465705 CTAGGAAAGCGGCAGGATCA 59.534 55.000 1.45 0.00 0.00 2.92
214 215 0.882484 GCTAGGAAAGCGGCAGGATC 60.882 60.000 1.45 0.00 42.53 3.36
215 216 1.147153 GCTAGGAAAGCGGCAGGAT 59.853 57.895 1.45 0.00 42.53 3.24
216 217 2.584608 GCTAGGAAAGCGGCAGGA 59.415 61.111 1.45 0.00 42.53 3.86
223 224 7.992273 GCTAGATGCTTACATGCTAGGAAAGC 61.992 46.154 11.11 11.11 44.61 3.51
224 225 5.407995 GCTAGATGCTTACATGCTAGGAAAG 59.592 44.000 0.00 0.00 36.35 2.62
225 226 5.300752 GCTAGATGCTTACATGCTAGGAAA 58.699 41.667 0.00 0.00 36.35 3.13
226 227 4.559502 CGCTAGATGCTTACATGCTAGGAA 60.560 45.833 0.00 0.00 36.35 3.36
227 228 3.057245 CGCTAGATGCTTACATGCTAGGA 60.057 47.826 0.00 0.00 36.35 2.94
228 229 3.057245 TCGCTAGATGCTTACATGCTAGG 60.057 47.826 0.00 0.00 36.35 3.02
229 230 3.917380 GTCGCTAGATGCTTACATGCTAG 59.083 47.826 0.00 0.00 36.35 3.42
230 231 3.609409 CGTCGCTAGATGCTTACATGCTA 60.609 47.826 0.00 0.00 36.35 3.49
231 232 2.748605 GTCGCTAGATGCTTACATGCT 58.251 47.619 0.00 0.00 36.35 3.79
232 233 1.453524 CGTCGCTAGATGCTTACATGC 59.546 52.381 0.00 0.00 36.35 4.06
233 234 2.732366 ACGTCGCTAGATGCTTACATG 58.268 47.619 0.00 0.00 36.35 3.21
234 235 3.372954 GAACGTCGCTAGATGCTTACAT 58.627 45.455 0.00 0.00 39.98 2.29
235 236 2.479049 GGAACGTCGCTAGATGCTTACA 60.479 50.000 0.00 0.00 40.11 2.41
236 237 2.117910 GGAACGTCGCTAGATGCTTAC 58.882 52.381 0.00 0.00 40.11 2.34
237 238 1.746787 TGGAACGTCGCTAGATGCTTA 59.253 47.619 0.00 0.00 40.11 3.09
238 239 0.530744 TGGAACGTCGCTAGATGCTT 59.469 50.000 0.00 0.00 40.11 3.91
239 240 0.530744 TTGGAACGTCGCTAGATGCT 59.469 50.000 0.00 0.00 40.11 3.79
240 241 0.645868 GTTGGAACGTCGCTAGATGC 59.354 55.000 0.00 0.00 36.88 3.91
241 242 1.920574 CAGTTGGAACGTCGCTAGATG 59.079 52.381 0.00 0.00 39.26 2.90
242 243 1.816835 TCAGTTGGAACGTCGCTAGAT 59.183 47.619 0.00 0.00 0.00 1.98
243 244 1.241165 TCAGTTGGAACGTCGCTAGA 58.759 50.000 0.00 0.00 0.00 2.43
244 245 2.060326 TTCAGTTGGAACGTCGCTAG 57.940 50.000 0.00 0.00 0.00 3.42
245 246 2.512485 TTTCAGTTGGAACGTCGCTA 57.488 45.000 0.00 0.00 34.56 4.26
246 247 1.658994 TTTTCAGTTGGAACGTCGCT 58.341 45.000 0.00 0.00 34.56 4.93
247 248 2.031191 TCTTTTTCAGTTGGAACGTCGC 59.969 45.455 0.00 0.00 34.56 5.19
248 249 3.936902 TCTTTTTCAGTTGGAACGTCG 57.063 42.857 0.00 0.00 34.56 5.12
249 250 6.937886 TTTTTCTTTTTCAGTTGGAACGTC 57.062 33.333 0.00 0.00 34.56 4.34
271 272 7.691050 GCTTAAATACGTCGTTAGATGCTTTTT 59.309 33.333 1.78 0.00 36.88 1.94
272 273 7.148540 TGCTTAAATACGTCGTTAGATGCTTTT 60.149 33.333 1.78 0.00 36.88 2.27
273 274 6.311935 TGCTTAAATACGTCGTTAGATGCTTT 59.688 34.615 1.78 0.00 36.88 3.51
274 275 5.808540 TGCTTAAATACGTCGTTAGATGCTT 59.191 36.000 1.78 0.00 36.88 3.91
275 276 5.345702 TGCTTAAATACGTCGTTAGATGCT 58.654 37.500 1.78 0.00 36.88 3.79
276 277 5.630896 TGCTTAAATACGTCGTTAGATGC 57.369 39.130 1.78 2.77 36.88 3.91
277 278 7.591795 AGAGATGCTTAAATACGTCGTTAGATG 59.408 37.037 1.78 0.00 39.26 2.90
278 279 7.649973 AGAGATGCTTAAATACGTCGTTAGAT 58.350 34.615 1.78 0.00 0.00 1.98
279 280 7.024340 AGAGATGCTTAAATACGTCGTTAGA 57.976 36.000 1.78 0.00 0.00 2.10
280 281 7.681125 AAGAGATGCTTAAATACGTCGTTAG 57.319 36.000 1.78 0.00 34.31 2.34
281 282 7.543172 ACAAAGAGATGCTTAAATACGTCGTTA 59.457 33.333 1.78 0.00 35.24 3.18
282 283 6.367969 ACAAAGAGATGCTTAAATACGTCGTT 59.632 34.615 1.78 0.00 35.24 3.85
283 284 5.867716 ACAAAGAGATGCTTAAATACGTCGT 59.132 36.000 2.21 2.21 35.24 4.34
284 285 6.253727 AGACAAAGAGATGCTTAAATACGTCG 59.746 38.462 0.00 0.00 35.24 5.12
285 286 7.527084 AGACAAAGAGATGCTTAAATACGTC 57.473 36.000 0.00 0.00 35.24 4.34
286 287 7.148407 CCAAGACAAAGAGATGCTTAAATACGT 60.148 37.037 0.00 0.00 35.24 3.57
287 288 7.182761 CCAAGACAAAGAGATGCTTAAATACG 58.817 38.462 0.00 0.00 35.24 3.06
288 289 7.336931 TCCCAAGACAAAGAGATGCTTAAATAC 59.663 37.037 0.00 0.00 35.24 1.89
289 290 7.402054 TCCCAAGACAAAGAGATGCTTAAATA 58.598 34.615 0.00 0.00 35.24 1.40
290 291 6.248433 TCCCAAGACAAAGAGATGCTTAAAT 58.752 36.000 0.00 0.00 35.24 1.40
291 292 5.630121 TCCCAAGACAAAGAGATGCTTAAA 58.370 37.500 0.00 0.00 35.24 1.52
292 293 5.013079 TCTCCCAAGACAAAGAGATGCTTAA 59.987 40.000 0.00 0.00 35.24 1.85
293 294 4.532126 TCTCCCAAGACAAAGAGATGCTTA 59.468 41.667 0.00 0.00 35.24 3.09
294 295 3.328931 TCTCCCAAGACAAAGAGATGCTT 59.671 43.478 0.00 0.00 38.88 3.91
295 296 2.909006 TCTCCCAAGACAAAGAGATGCT 59.091 45.455 0.00 0.00 30.56 3.79
296 297 3.055530 TCTCTCCCAAGACAAAGAGATGC 60.056 47.826 0.00 0.00 39.37 3.91
297 298 4.815533 TCTCTCCCAAGACAAAGAGATG 57.184 45.455 0.00 0.00 39.37 2.90
298 299 4.594920 TGTTCTCTCCCAAGACAAAGAGAT 59.405 41.667 2.09 0.00 42.71 2.75
299 300 3.967326 TGTTCTCTCCCAAGACAAAGAGA 59.033 43.478 0.00 0.00 41.80 3.10
300 301 4.039730 TCTGTTCTCTCCCAAGACAAAGAG 59.960 45.833 0.00 0.00 37.25 2.85
301 302 3.967326 TCTGTTCTCTCCCAAGACAAAGA 59.033 43.478 0.00 0.00 0.00 2.52
302 303 4.342862 TCTGTTCTCTCCCAAGACAAAG 57.657 45.455 0.00 0.00 0.00 2.77
303 304 4.771114 TTCTGTTCTCTCCCAAGACAAA 57.229 40.909 0.00 0.00 0.00 2.83
304 305 4.771114 TTTCTGTTCTCTCCCAAGACAA 57.229 40.909 0.00 0.00 0.00 3.18
305 306 4.771114 TTTTCTGTTCTCTCCCAAGACA 57.229 40.909 0.00 0.00 0.00 3.41
306 307 7.745620 TTATTTTTCTGTTCTCTCCCAAGAC 57.254 36.000 0.00 0.00 0.00 3.01
307 308 9.672673 CTATTATTTTTCTGTTCTCTCCCAAGA 57.327 33.333 0.00 0.00 0.00 3.02
308 309 9.454859 ACTATTATTTTTCTGTTCTCTCCCAAG 57.545 33.333 0.00 0.00 0.00 3.61
325 326 9.803507 GGTAAGCACCCCTTAATACTATTATTT 57.196 33.333 0.00 0.00 39.11 1.40
346 347 3.482156 CACCCATGGATGAGAGGTAAG 57.518 52.381 15.22 0.00 0.00 2.34
364 365 2.564975 GCACATGCAGAGCACCAC 59.435 61.111 0.00 0.00 43.04 4.16
440 441 0.390860 AGACGAACTGCTCTGCAACT 59.609 50.000 0.00 0.00 38.41 3.16
442 443 0.319900 GGAGACGAACTGCTCTGCAA 60.320 55.000 0.00 0.00 38.41 4.08
443 444 1.181741 AGGAGACGAACTGCTCTGCA 61.182 55.000 0.00 0.00 43.71 4.41
459 460 1.267121 CGAGGAAGTGAAGGGAAGGA 58.733 55.000 0.00 0.00 0.00 3.36
472 473 2.351835 CGAGAAGAAGCAGAACGAGGAA 60.352 50.000 0.00 0.00 0.00 3.36
477 478 0.436531 GTGCGAGAAGAAGCAGAACG 59.563 55.000 0.00 0.00 44.70 3.95
479 480 1.788258 CAGTGCGAGAAGAAGCAGAA 58.212 50.000 0.00 0.00 44.70 3.02
565 566 4.148825 CCTCAACTCCTCCGGCCG 62.149 72.222 21.04 21.04 0.00 6.13
628 629 5.843019 TGAGTTGACCCTCCTTTAGAAAT 57.157 39.130 0.00 0.00 0.00 2.17
637 638 0.908198 AGCAGATGAGTTGACCCTCC 59.092 55.000 0.00 0.00 0.00 4.30
673 674 9.553064 CCCTTAATCCTATATGATTATGTGAGC 57.447 37.037 10.22 0.00 37.14 4.26
699 700 6.366061 TGCGTGATTATTGCATATCTAGTCAC 59.634 38.462 0.00 0.00 32.86 3.67
701 702 6.951256 TGCGTGATTATTGCATATCTAGTC 57.049 37.500 0.00 0.00 32.86 2.59
750 751 0.617935 TGGTTGATTCATGGCGGAGA 59.382 50.000 0.00 0.00 0.00 3.71
761 762 4.942761 ACTTGTTGCAGATTGGTTGATT 57.057 36.364 0.00 0.00 0.00 2.57
781 782 5.912892 TGGGGATTCTTTGAAGAACAAAAC 58.087 37.500 8.24 0.73 46.80 2.43
789 790 4.272489 TGCTACATGGGGATTCTTTGAAG 58.728 43.478 0.00 0.00 0.00 3.02
791 792 4.314522 TTGCTACATGGGGATTCTTTGA 57.685 40.909 0.00 0.00 0.00 2.69
901 906 5.764686 TGCAGTATTACATCATTTAGGCCAG 59.235 40.000 5.01 0.00 0.00 4.85
991 1003 3.208594 CTGCAGTTGCCATATCTTGCTA 58.791 45.455 5.25 0.00 41.18 3.49
1059 1071 2.472029 CCTCCCATAAGAGTGGACAGT 58.528 52.381 0.00 0.00 42.02 3.55
1105 1117 5.409826 CACTGAGAAACTGTACATCCTTTCC 59.590 44.000 13.35 8.47 0.00 3.13
1202 1217 6.235231 TGTCTCTTACTTTGTTTCTCCAGT 57.765 37.500 0.00 0.00 0.00 4.00
1266 1281 7.914871 CCCTTTTCATTTTTGTCCACAATTTTC 59.085 33.333 0.00 0.00 35.55 2.29
1524 1554 5.178096 TCTCCTTGTCATTTAGCCAATCA 57.822 39.130 0.00 0.00 0.00 2.57
1626 1656 3.081804 ACGACATTCAAATCCCACTTCC 58.918 45.455 0.00 0.00 0.00 3.46
1631 1661 1.902938 TGCACGACATTCAAATCCCA 58.097 45.000 0.00 0.00 0.00 4.37
1683 1713 7.718314 TGAGATAGTAAGCTACGGATGAGTTTA 59.282 37.037 0.00 0.00 0.00 2.01
1689 1719 6.320494 AGTTGAGATAGTAAGCTACGGATG 57.680 41.667 0.00 0.00 0.00 3.51
1698 1728 8.740906 TCTACACTTCCAAGTTGAGATAGTAAG 58.259 37.037 3.87 7.61 37.08 2.34
1716 1746 6.967767 CGATATCAAGAGAACGTTCTACACTT 59.032 38.462 29.79 23.91 37.73 3.16
1721 1751 7.549615 TCTTCGATATCAAGAGAACGTTCTA 57.450 36.000 29.79 15.49 37.73 2.10
1724 1754 7.884816 TTTTCTTCGATATCAAGAGAACGTT 57.115 32.000 0.00 0.00 31.48 3.99
1726 1756 7.899974 ACATTTTCTTCGATATCAAGAGAACG 58.100 34.615 16.09 13.07 29.46 3.95
1758 1788 9.467796 TTCTGTAGATATTCTCTGAGTTTCTCA 57.532 33.333 4.32 0.00 38.25 3.27
1816 3408 4.974645 ACAGAGATAGGACACCACAAAA 57.025 40.909 0.00 0.00 0.00 2.44
1830 3422 2.942376 TGTTTGTTCGTGCAACAGAGAT 59.058 40.909 0.00 0.00 45.98 2.75
1874 3468 6.687081 TTCTTGTTTGTGTTTCTTACGGAT 57.313 33.333 0.00 0.00 0.00 4.18
2095 3694 6.969366 AGATCTCAGTTCTGATTGATAGACG 58.031 40.000 2.89 0.00 0.00 4.18
2143 3750 7.440523 AGTGTCAAGTCAAGTGGATTAATTC 57.559 36.000 0.00 0.00 0.00 2.17
2170 3777 5.637810 TCAAGTATCTGCCAAAGAGTTAACG 59.362 40.000 0.00 0.00 38.67 3.18
2171 3778 7.617041 ATCAAGTATCTGCCAAAGAGTTAAC 57.383 36.000 0.00 0.00 38.67 2.01
2204 3811 8.278639 TCTGGGAAAGCACCTTTAATAATATCA 58.721 33.333 0.00 0.00 33.49 2.15
2252 3884 8.677300 ACATCATGTATTCTTGTGGTTGTTATC 58.323 33.333 0.00 0.00 0.00 1.75
2319 3951 4.702831 TCATCGCTAAGTGGCATCATTTA 58.297 39.130 0.00 0.00 0.00 1.40
2326 3958 1.550524 AGTCTTCATCGCTAAGTGGCA 59.449 47.619 0.00 0.00 0.00 4.92
2481 4113 0.956633 TGGTCGAAGCGTTCACTACT 59.043 50.000 0.00 0.00 0.00 2.57
2482 4114 1.719780 CTTGGTCGAAGCGTTCACTAC 59.280 52.381 0.00 0.00 0.00 2.73
2483 4115 1.610038 TCTTGGTCGAAGCGTTCACTA 59.390 47.619 0.00 0.00 0.00 2.74
2537 4184 4.202111 CCTTCCAACGTGAAATTTGTTCCT 60.202 41.667 0.00 0.00 0.00 3.36
2625 4296 6.095860 TCCAAATGATGCCTCTGTATTTTGAG 59.904 38.462 0.00 0.00 0.00 3.02
2661 4332 8.205131 TCTTTACTAATAAAATCTCCGGCAAC 57.795 34.615 0.00 0.00 29.82 4.17
2702 4947 6.772716 TGAAATAACTTCTTGCAACCTTCTCT 59.227 34.615 0.00 0.00 34.86 3.10
2804 5049 4.286101 AGATAAGATCGCGCATCATATCG 58.714 43.478 23.48 4.55 43.01 2.92
2840 5085 9.905275 TCCACTATGGTGAGAAAATTCTCGTCG 62.905 44.444 11.31 2.96 45.38 5.12
2843 5088 5.419542 TCCACTATGGTGAGAAAATTCTCG 58.580 41.667 11.31 5.60 45.38 4.04
2886 5131 3.306166 CGACGGACATTGTTATCCAGTTC 59.694 47.826 0.00 0.00 34.35 3.01
2900 5145 0.954449 GGAGAGACAGTCGACGGACA 60.954 60.000 22.71 0.00 45.92 4.02
2923 5168 9.410556 ACTTTGTTTCAATAATTTCTTCATCCG 57.589 29.630 0.00 0.00 0.00 4.18
2930 5178 9.942850 CCCCATAACTTTGTTTCAATAATTTCT 57.057 29.630 0.00 0.00 0.00 2.52
2941 5192 7.797062 ACAAATGTTACCCCATAACTTTGTTT 58.203 30.769 14.60 4.44 43.40 2.83
2964 5215 1.754803 AGTCCGAACTTGTGACAGACA 59.245 47.619 3.74 0.00 28.74 3.41
3035 5286 2.631418 TACGCAGAACTCGAAGGAAG 57.369 50.000 0.00 0.00 0.00 3.46
3052 5303 8.010733 TCCATCCAATCCAGAATTTTCAATAC 57.989 34.615 0.00 0.00 0.00 1.89
3064 5315 2.240667 AGGTCAACTCCATCCAATCCAG 59.759 50.000 0.00 0.00 0.00 3.86
3071 5322 1.625818 AGTGTGAGGTCAACTCCATCC 59.374 52.381 0.00 0.00 46.01 3.51
3075 5326 2.610727 GCACTAGTGTGAGGTCAACTCC 60.611 54.545 23.44 0.00 46.55 3.85
3089 5340 1.059913 AAGGCCTGTTCTGCACTAGT 58.940 50.000 5.69 0.00 0.00 2.57
3090 5341 2.191128 AAAGGCCTGTTCTGCACTAG 57.809 50.000 5.69 0.00 0.00 2.57
3091 5342 3.263170 TGATAAAGGCCTGTTCTGCACTA 59.737 43.478 5.69 0.00 0.00 2.74
3092 5343 2.040278 TGATAAAGGCCTGTTCTGCACT 59.960 45.455 5.69 0.00 0.00 4.40
3093 5344 2.162408 GTGATAAAGGCCTGTTCTGCAC 59.838 50.000 5.69 7.01 0.00 4.57
3094 5345 2.436417 GTGATAAAGGCCTGTTCTGCA 58.564 47.619 5.69 0.00 0.00 4.41
3095 5346 1.745653 GGTGATAAAGGCCTGTTCTGC 59.254 52.381 5.69 0.00 0.00 4.26
3096 5347 2.009774 CGGTGATAAAGGCCTGTTCTG 58.990 52.381 5.69 0.00 0.00 3.02
3097 5348 1.065418 CCGGTGATAAAGGCCTGTTCT 60.065 52.381 5.69 0.00 0.00 3.01
3098 5349 1.339727 ACCGGTGATAAAGGCCTGTTC 60.340 52.381 6.12 4.24 0.00 3.18
3099 5350 0.696501 ACCGGTGATAAAGGCCTGTT 59.303 50.000 6.12 5.66 0.00 3.16
3100 5351 0.696501 AACCGGTGATAAAGGCCTGT 59.303 50.000 8.52 1.77 0.00 4.00
3101 5352 1.379527 GAACCGGTGATAAAGGCCTG 58.620 55.000 8.52 0.00 0.00 4.85
3102 5353 0.107848 CGAACCGGTGATAAAGGCCT 60.108 55.000 8.52 0.00 0.00 5.19
3103 5354 0.392060 ACGAACCGGTGATAAAGGCC 60.392 55.000 8.52 0.00 0.00 5.19
3104 5355 2.298411 TACGAACCGGTGATAAAGGC 57.702 50.000 8.52 0.00 0.00 4.35
3105 5356 3.192466 CCTTACGAACCGGTGATAAAGG 58.808 50.000 8.52 15.75 0.00 3.11
3106 5357 3.192466 CCCTTACGAACCGGTGATAAAG 58.808 50.000 8.52 10.36 0.00 1.85
3107 5358 2.677613 GCCCTTACGAACCGGTGATAAA 60.678 50.000 8.52 0.00 0.00 1.40
3108 5359 1.134729 GCCCTTACGAACCGGTGATAA 60.135 52.381 8.52 6.57 0.00 1.75
3109 5360 0.461135 GCCCTTACGAACCGGTGATA 59.539 55.000 8.52 0.00 0.00 2.15
3110 5361 1.219935 GCCCTTACGAACCGGTGAT 59.780 57.895 8.52 0.00 0.00 3.06
3111 5362 2.658422 GCCCTTACGAACCGGTGA 59.342 61.111 8.52 0.00 0.00 4.02
3112 5363 2.435410 GGCCCTTACGAACCGGTG 60.435 66.667 8.52 0.00 0.00 4.94
3113 5364 1.771783 AAAGGCCCTTACGAACCGGT 61.772 55.000 0.00 0.00 0.00 5.28
3114 5365 0.249955 TAAAGGCCCTTACGAACCGG 59.750 55.000 0.00 0.00 0.00 5.28
3115 5366 1.066645 ACTAAAGGCCCTTACGAACCG 60.067 52.381 0.00 0.00 0.00 4.44
3116 5367 2.353323 CACTAAAGGCCCTTACGAACC 58.647 52.381 0.00 0.00 0.00 3.62
3117 5368 1.736126 GCACTAAAGGCCCTTACGAAC 59.264 52.381 0.00 0.00 0.00 3.95
3118 5369 1.339342 GGCACTAAAGGCCCTTACGAA 60.339 52.381 0.00 0.00 45.87 3.85
3119 5370 0.251073 GGCACTAAAGGCCCTTACGA 59.749 55.000 0.00 0.00 45.87 3.43
3120 5371 2.776659 GGCACTAAAGGCCCTTACG 58.223 57.895 0.00 0.00 45.87 3.18
3127 5378 1.923227 GCAGAACCGGCACTAAAGGC 61.923 60.000 0.00 0.00 0.00 4.35
3128 5379 0.605319 TGCAGAACCGGCACTAAAGG 60.605 55.000 0.00 0.00 36.11 3.11
3129 5380 1.069227 GTTGCAGAACCGGCACTAAAG 60.069 52.381 0.00 0.00 41.75 1.85
3130 5381 0.948678 GTTGCAGAACCGGCACTAAA 59.051 50.000 0.00 0.00 41.75 1.85
3131 5382 0.887387 GGTTGCAGAACCGGCACTAA 60.887 55.000 0.00 0.00 42.47 2.24
3132 5383 1.302192 GGTTGCAGAACCGGCACTA 60.302 57.895 0.00 0.00 42.47 2.74
3133 5384 2.594592 GGTTGCAGAACCGGCACT 60.595 61.111 0.00 0.00 42.47 4.40
3145 5396 1.819632 CCTCCATAGTGCCGGTTGC 60.820 63.158 1.90 0.00 41.77 4.17
3146 5397 1.153168 CCCTCCATAGTGCCGGTTG 60.153 63.158 1.90 0.00 0.00 3.77
3147 5398 2.375345 CCCCTCCATAGTGCCGGTT 61.375 63.158 1.90 0.00 0.00 4.44
3148 5399 2.768344 CCCCTCCATAGTGCCGGT 60.768 66.667 1.90 0.00 0.00 5.28
3149 5400 2.445845 TCCCCTCCATAGTGCCGG 60.446 66.667 0.00 0.00 0.00 6.13
3150 5401 1.457643 TCTCCCCTCCATAGTGCCG 60.458 63.158 0.00 0.00 0.00 5.69
3151 5402 0.399233 AGTCTCCCCTCCATAGTGCC 60.399 60.000 0.00 0.00 0.00 5.01
3152 5403 2.383442 TAGTCTCCCCTCCATAGTGC 57.617 55.000 0.00 0.00 0.00 4.40
3153 5404 3.070302 GCTTTAGTCTCCCCTCCATAGTG 59.930 52.174 0.00 0.00 0.00 2.74
3154 5405 3.310193 GCTTTAGTCTCCCCTCCATAGT 58.690 50.000 0.00 0.00 0.00 2.12
3155 5406 2.635427 GGCTTTAGTCTCCCCTCCATAG 59.365 54.545 0.00 0.00 0.00 2.23
3156 5407 2.690840 GGCTTTAGTCTCCCCTCCATA 58.309 52.381 0.00 0.00 0.00 2.74
3157 5408 1.512735 GGCTTTAGTCTCCCCTCCAT 58.487 55.000 0.00 0.00 0.00 3.41
3158 5409 0.620700 GGGCTTTAGTCTCCCCTCCA 60.621 60.000 0.00 0.00 34.59 3.86
3159 5410 2.222885 GGGCTTTAGTCTCCCCTCC 58.777 63.158 0.00 0.00 34.59 4.30
3177 5428 0.176449 CGAACCGGTACTAAAGGGGG 59.824 60.000 8.00 0.00 0.00 5.40
3178 5429 0.176449 CCGAACCGGTACTAAAGGGG 59.824 60.000 8.00 0.00 42.73 4.79
3179 5430 3.746900 CCGAACCGGTACTAAAGGG 57.253 57.895 8.00 0.00 42.73 3.95
3197 5448 3.362851 CTTTAGCGCCGGTTCGTGC 62.363 63.158 2.29 0.00 0.00 5.34
3198 5449 2.025418 ACTTTAGCGCCGGTTCGTG 61.025 57.895 2.29 0.00 0.00 4.35
3199 5450 2.025418 CACTTTAGCGCCGGTTCGT 61.025 57.895 2.29 0.00 0.00 3.85
3200 5451 2.776072 CACTTTAGCGCCGGTTCG 59.224 61.111 2.29 0.00 0.00 3.95
3201 5452 2.479198 GCACTTTAGCGCCGGTTC 59.521 61.111 2.29 0.00 0.00 3.62
3202 5453 3.053896 GGCACTTTAGCGCCGGTT 61.054 61.111 2.29 0.00 38.82 4.44
3207 5458 2.561373 GTGGTGGCACTTTAGCGC 59.439 61.111 18.45 0.00 34.64 5.92
3208 5459 0.668096 TACGTGGTGGCACTTTAGCG 60.668 55.000 18.45 15.80 34.64 4.26
3209 5460 1.076332 CTACGTGGTGGCACTTTAGC 58.924 55.000 18.45 0.25 0.00 3.09
3210 5461 1.076332 GCTACGTGGTGGCACTTTAG 58.924 55.000 18.45 12.91 39.80 1.85
3211 5462 0.393448 TGCTACGTGGTGGCACTTTA 59.607 50.000 18.45 1.49 44.56 1.85
3212 5463 1.147376 TGCTACGTGGTGGCACTTT 59.853 52.632 18.45 1.97 44.56 2.66
3213 5464 2.825982 TGCTACGTGGTGGCACTT 59.174 55.556 18.45 2.33 44.56 3.16
3217 5468 2.809601 CTCGTGCTACGTGGTGGC 60.810 66.667 0.00 0.00 43.14 5.01
3218 5469 2.809601 GCTCGTGCTACGTGGTGG 60.810 66.667 0.00 0.00 43.14 4.61
3219 5470 2.809601 GGCTCGTGCTACGTGGTG 60.810 66.667 9.61 0.00 43.14 4.17
3220 5471 3.282745 CTGGCTCGTGCTACGTGGT 62.283 63.158 9.61 0.00 43.14 4.16
3221 5472 2.507102 CTGGCTCGTGCTACGTGG 60.507 66.667 9.61 0.00 43.14 4.94
3222 5473 2.507102 CCTGGCTCGTGCTACGTG 60.507 66.667 9.61 7.29 43.14 4.49
3223 5474 4.436998 GCCTGGCTCGTGCTACGT 62.437 66.667 12.43 0.00 43.14 3.57
3225 5476 4.840005 GGGCCTGGCTCGTGCTAC 62.840 72.222 19.68 0.00 39.59 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.