Multiple sequence alignment - TraesCS6D01G386300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G386300 chr6D 100.000 3618 0 0 1 3618 463777031 463773414 0.000000e+00 6682.0
1 TraesCS6D01G386300 chr6D 85.618 445 37 15 805 1225 463810061 463809620 3.320000e-120 442.0
2 TraesCS6D01G386300 chr6D 88.000 125 15 0 3047 3171 235206706 235206830 8.090000e-32 148.0
3 TraesCS6D01G386300 chr6D 92.308 39 3 0 3007 3045 472539539 472539577 5.050000e-04 56.5
4 TraesCS6D01G386300 chr6B 93.911 1823 80 17 967 2768 707208334 707206522 0.000000e+00 2723.0
5 TraesCS6D01G386300 chr6B 84.964 685 73 13 71 735 707210511 707209837 0.000000e+00 667.0
6 TraesCS6D01G386300 chr6B 92.000 75 6 0 822 896 707208478 707208404 4.940000e-19 106.0
7 TraesCS6D01G386300 chr6B 96.610 59 2 0 838 896 707216189 707216131 8.270000e-17 99.0
8 TraesCS6D01G386300 chr6B 84.466 103 6 5 696 796 263722406 263722500 3.850000e-15 93.5
9 TraesCS6D01G386300 chr6B 90.476 63 2 1 834 896 707211221 707211163 2.990000e-11 80.5
10 TraesCS6D01G386300 chr6B 95.455 44 2 0 839 882 707218965 707218922 1.800000e-08 71.3
11 TraesCS6D01G386300 chr6B 100.000 34 0 0 805 838 707209665 707209632 3.020000e-06 63.9
12 TraesCS6D01G386300 chr6B 100.000 28 0 0 805 832 707216242 707216215 7.000000e-03 52.8
13 TraesCS6D01G386300 chrUn 94.667 1725 77 10 966 2681 74683377 74685095 0.000000e+00 2662.0
14 TraesCS6D01G386300 chrUn 90.193 1866 139 24 928 2769 75323861 75325706 0.000000e+00 2392.0
15 TraesCS6D01G386300 chrUn 87.040 571 60 9 71 637 75327886 75327326 1.830000e-177 632.0
16 TraesCS6D01G386300 chrUn 86.243 567 59 13 71 633 74682153 74682704 6.690000e-167 597.0
17 TraesCS6D01G386300 chrUn 93.289 298 11 5 3229 3526 281043091 281042803 7.180000e-117 431.0
18 TraesCS6D01G386300 chrUn 93.416 243 12 1 2908 3150 74688455 74688693 1.240000e-94 357.0
19 TraesCS6D01G386300 chrUn 95.918 98 3 1 2763 2860 74686605 74686701 1.340000e-34 158.0
20 TraesCS6D01G386300 chrUn 87.037 108 13 1 1118 1225 74676096 74676202 1.760000e-23 121.0
21 TraesCS6D01G386300 chrUn 91.463 82 5 2 1 81 75328031 75327951 1.060000e-20 111.0
22 TraesCS6D01G386300 chrUn 84.158 101 10 3 696 796 361091826 361091920 3.850000e-15 93.5
23 TraesCS6D01G386300 chrUn 96.000 50 2 0 839 888 75323036 75323085 8.330000e-12 82.4
24 TraesCS6D01G386300 chrUn 88.889 63 3 1 834 896 74680246 74680304 1.390000e-09 75.0
25 TraesCS6D01G386300 chrUn 97.619 42 1 0 844 885 75323379 75323420 5.010000e-09 73.1
26 TraesCS6D01G386300 chrUn 100.000 37 0 0 3582 3618 281042761 281042725 6.480000e-08 69.4
27 TraesCS6D01G386300 chrUn 97.143 35 1 0 846 880 75325934 75325900 3.900000e-05 60.2
28 TraesCS6D01G386300 chr3B 86.643 277 25 7 72 336 49403766 49403490 2.730000e-76 296.0
29 TraesCS6D01G386300 chr3B 84.158 101 10 3 696 796 483571046 483570952 3.850000e-15 93.5
30 TraesCS6D01G386300 chr3B 77.778 153 25 8 643 790 603123240 603123388 6.440000e-13 86.1
31 TraesCS6D01G386300 chr1A 86.447 273 27 7 72 336 55133781 55134051 1.270000e-74 291.0
32 TraesCS6D01G386300 chr1A 85.654 237 30 3 104 336 558024043 558024279 2.790000e-61 246.0
33 TraesCS6D01G386300 chr1A 87.037 108 13 1 1118 1225 13906511 13906405 1.760000e-23 121.0
34 TraesCS6D01G386300 chr6A 87.500 232 26 3 85 314 454685569 454685799 7.700000e-67 265.0
35 TraesCS6D01G386300 chr5B 89.076 119 13 0 3053 3171 356150551 356150433 8.090000e-32 148.0
36 TraesCS6D01G386300 chr5B 79.747 158 20 8 639 791 584139473 584139623 1.780000e-18 104.0
37 TraesCS6D01G386300 chr5B 91.304 46 4 0 334 379 110251435 110251480 3.020000e-06 63.9
38 TraesCS6D01G386300 chr3D 88.235 119 13 1 3053 3171 264861335 264861218 1.350000e-29 141.0
39 TraesCS6D01G386300 chr3D 84.158 101 10 3 696 796 332081303 332081397 3.850000e-15 93.5
40 TraesCS6D01G386300 chr3D 84.158 101 10 3 696 796 341029783 341029877 3.850000e-15 93.5
41 TraesCS6D01G386300 chr3D 84.158 101 10 3 696 796 350024723 350024817 3.850000e-15 93.5
42 TraesCS6D01G386300 chr3D 87.931 58 7 0 334 391 4486113 4486056 6.480000e-08 69.4
43 TraesCS6D01G386300 chr3A 88.235 119 13 1 3053 3171 325791322 325791205 1.350000e-29 141.0
44 TraesCS6D01G386300 chr3A 77.273 154 26 8 639 789 28224354 28224207 8.330000e-12 82.4
45 TraesCS6D01G386300 chr4D 86.508 126 16 1 3047 3171 331234686 331234811 1.750000e-28 137.0
46 TraesCS6D01G386300 chr4D 77.419 155 26 8 639 788 190480393 190480243 2.310000e-12 84.2
47 TraesCS6D01G386300 chr4A 86.992 123 15 1 3053 3174 313469562 313469440 1.750000e-28 137.0
48 TraesCS6D01G386300 chr2D 86.400 125 17 0 3047 3171 209145833 209145957 1.750000e-28 137.0
49 TraesCS6D01G386300 chr2D 84.746 59 7 2 339 395 265159582 265159524 1.400000e-04 58.4
50 TraesCS6D01G386300 chr4B 84.672 137 19 2 3047 3182 496240338 496240473 6.300000e-28 135.0
51 TraesCS6D01G386300 chr2B 78.289 152 22 7 642 788 442917354 442917499 1.790000e-13 87.9
52 TraesCS6D01G386300 chr1B 77.778 153 25 6 639 788 648795810 648795956 6.440000e-13 86.1
53 TraesCS6D01G386300 chr1B 92.308 39 3 0 334 372 108587832 108587870 5.050000e-04 56.5
54 TraesCS6D01G386300 chr7D 84.337 83 7 3 331 413 204106388 204106464 3.870000e-10 76.8
55 TraesCS6D01G386300 chr7D 77.070 157 20 12 639 788 630683989 630684136 3.870000e-10 76.8
56 TraesCS6D01G386300 chr5A 86.207 58 8 0 334 391 552746726 552746669 3.020000e-06 63.9
57 TraesCS6D01G386300 chr5A 78.571 98 18 3 639 733 80106142 80106239 1.080000e-05 62.1
58 TraesCS6D01G386300 chr1D 84.375 64 8 2 334 395 477229368 477229305 1.080000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G386300 chr6D 463773414 463777031 3617 True 6682.000000 6682 100.0000 1 3618 1 chr6D.!!$R1 3617
1 TraesCS6D01G386300 chr6B 707206522 707211221 4699 True 728.080000 2723 92.2702 71 2768 5 chr6B.!!$R1 2697
2 TraesCS6D01G386300 chrUn 75323036 75325706 2670 False 849.166667 2392 94.6040 839 2769 3 chrUn.!!$F4 1930
3 TraesCS6D01G386300 chrUn 74680246 74688693 8447 False 769.800000 2662 91.8266 71 3150 5 chrUn.!!$F3 3079
4 TraesCS6D01G386300 chrUn 75325900 75328031 2131 True 267.733333 632 91.8820 1 880 3 chrUn.!!$R1 879

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
556 2422 0.108329 GTGTTAGCTTAGCTGCGGGA 60.108 55.0 17.97 0.00 40.1 5.14 F
559 2425 0.393077 TTAGCTTAGCTGCGGGATCC 59.607 55.0 17.97 1.92 40.1 3.36 F
2033 6807 0.795358 CGGGCCGAAATAAACAACGC 60.795 55.0 24.41 0.00 0.0 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1437 6205 3.142162 TACCGCGGGATGCTCGAA 61.142 61.111 31.76 0.00 43.27 3.71 R
2105 6884 7.168469 CCGGACCTGTAAAAGTTTATGTTTTTG 59.832 37.037 0.00 0.00 0.00 2.44 R
3353 11286 0.096454 CACATGCATGCACGACTCAG 59.904 55.000 25.37 9.38 0.00 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.961576 CAACTGAAACTGATTTAAACGGGTA 58.038 36.000 0.00 0.00 0.00 3.69
27 28 5.623169 TGAAACTGATTTAAACGGGTAGGT 58.377 37.500 0.00 0.00 0.00 3.08
69 70 2.158449 GTGACCATGAAAGCTTCGTCTG 59.842 50.000 0.00 0.00 0.00 3.51
70 71 2.224281 TGACCATGAAAGCTTCGTCTGT 60.224 45.455 0.00 0.00 0.00 3.41
71 72 2.808543 GACCATGAAAGCTTCGTCTGTT 59.191 45.455 0.00 0.00 0.00 3.16
72 73 2.549754 ACCATGAAAGCTTCGTCTGTTG 59.450 45.455 0.00 0.00 0.00 3.33
74 75 3.003689 CCATGAAAGCTTCGTCTGTTGTT 59.996 43.478 0.00 0.00 0.00 2.83
86 1941 7.360438 GCTTCGTCTGTTGTTATTCAGATCTTT 60.360 37.037 0.00 0.00 41.67 2.52
236 2092 5.412904 GCCTACTTTAAAGCTGTGTGAATCT 59.587 40.000 15.24 0.00 0.00 2.40
301 2157 9.533831 ACCTTTCTTTAAACTTGATGGATGTAT 57.466 29.630 0.00 0.00 0.00 2.29
321 2179 6.811954 TGTATTGTTGTAGTGACAGACTTGA 58.188 36.000 0.00 0.00 36.76 3.02
337 2195 6.318648 ACAGACTTGACTGAATGTTGCTTTAA 59.681 34.615 7.06 0.00 40.63 1.52
469 2328 7.523703 TGGTTATATGAACCATGGCCTATAT 57.476 36.000 13.04 14.64 44.74 0.86
515 2381 0.322975 ATCGTATGATCAGGCCAGGC 59.677 55.000 5.01 1.26 0.00 4.85
516 2382 1.048160 TCGTATGATCAGGCCAGGCA 61.048 55.000 15.19 0.00 0.00 4.75
518 2384 1.746861 CGTATGATCAGGCCAGGCAAA 60.747 52.381 15.19 0.00 0.00 3.68
534 2400 1.892209 CAAACCTGCGTAGTTTCCCT 58.108 50.000 0.00 0.00 35.28 4.20
556 2422 0.108329 GTGTTAGCTTAGCTGCGGGA 60.108 55.000 17.97 0.00 40.10 5.14
559 2425 0.393077 TTAGCTTAGCTGCGGGATCC 59.607 55.000 17.97 1.92 40.10 3.36
628 2494 1.880027 GTTTCCCCTTGTGCTGTGTAG 59.120 52.381 0.00 0.00 0.00 2.74
648 2527 9.899226 TGTGTAGATGTCGATTCTAAATATGAG 57.101 33.333 8.99 0.00 0.00 2.90
726 2642 7.750229 TTGTAGATTCACTCATTTTGCTTCT 57.250 32.000 0.00 0.00 0.00 2.85
737 2653 7.119699 CACTCATTTTGCTTCTTATGTACTCCA 59.880 37.037 0.00 0.00 0.00 3.86
738 2654 7.335422 ACTCATTTTGCTTCTTATGTACTCCAG 59.665 37.037 0.00 0.00 0.00 3.86
741 2657 7.817418 TTTTGCTTCTTATGTACTCCAGTTT 57.183 32.000 0.00 0.00 0.00 2.66
742 2658 6.801539 TTGCTTCTTATGTACTCCAGTTTG 57.198 37.500 0.00 0.00 0.00 2.93
743 2659 5.865085 TGCTTCTTATGTACTCCAGTTTGT 58.135 37.500 0.00 0.00 0.00 2.83
744 2660 6.999950 TGCTTCTTATGTACTCCAGTTTGTA 58.000 36.000 0.00 0.00 0.00 2.41
745 2661 7.620880 TGCTTCTTATGTACTCCAGTTTGTAT 58.379 34.615 0.00 0.00 0.00 2.29
747 2663 8.391106 GCTTCTTATGTACTCCAGTTTGTATTG 58.609 37.037 0.00 0.00 0.00 1.90
748 2664 8.786826 TTCTTATGTACTCCAGTTTGTATTGG 57.213 34.615 0.00 0.00 35.74 3.16
751 2667 9.396022 CTTATGTACTCCAGTTTGTATTGGAAT 57.604 33.333 0.00 0.00 42.61 3.01
752 2668 7.865706 ATGTACTCCAGTTTGTATTGGAATC 57.134 36.000 0.00 0.00 42.61 2.52
801 2795 6.015010 ACAGAGGGAGTACATATATTGCAGAC 60.015 42.308 0.00 0.00 0.00 3.51
842 3007 3.752796 GCGTTAGCTGTACCCATGA 57.247 52.632 0.00 0.00 41.01 3.07
995 5760 1.589414 AGCTTAGGCATCTTGAGGGT 58.411 50.000 0.00 0.00 41.70 4.34
996 5761 2.764269 AGCTTAGGCATCTTGAGGGTA 58.236 47.619 0.00 0.00 41.70 3.69
997 5762 2.703007 AGCTTAGGCATCTTGAGGGTAG 59.297 50.000 0.00 0.00 41.70 3.18
998 5763 2.224402 GCTTAGGCATCTTGAGGGTAGG 60.224 54.545 0.00 0.00 38.54 3.18
1022 5787 2.111255 TGGAGGACTGGGTGTACTACTT 59.889 50.000 0.00 0.00 41.23 2.24
1075 5840 2.125552 TGTTCTCATCCCTGCGCG 60.126 61.111 0.00 0.00 0.00 6.86
1206 5974 1.588932 CGTCGCACGCTCATGGTAT 60.589 57.895 0.00 0.00 33.65 2.73
1215 5983 1.227943 CTCATGGTATGGCCCCGTG 60.228 63.158 11.48 11.48 39.83 4.94
1501 6269 4.492160 GCCTCGTCGACGGCATCA 62.492 66.667 35.05 16.53 45.59 3.07
1632 6400 3.749064 ATCGCGGCAGTCACGTCT 61.749 61.111 6.13 0.00 0.00 4.18
2033 6807 0.795358 CGGGCCGAAATAAACAACGC 60.795 55.000 24.41 0.00 0.00 4.84
2637 7428 1.867698 GCTAGCAGCTCTCAATCGTCC 60.868 57.143 10.63 0.00 38.45 4.79
2640 7431 0.459489 GCAGCTCTCAATCGTCCTCT 59.541 55.000 0.00 0.00 0.00 3.69
2812 9039 4.383948 GTGTTTCAATTAGCAAGAGCAAGC 59.616 41.667 0.00 0.00 45.49 4.01
2836 9063 6.571150 GCTCAAGGTGCAAGAAATCTTTATGT 60.571 38.462 0.00 0.00 33.11 2.29
2852 9079 2.380064 ATGTTCCCTTGCACCTTGAA 57.620 45.000 0.00 0.00 0.00 2.69
2873 10471 2.754552 ACTTTATGCATGTGCGTTGGAT 59.245 40.909 10.16 0.00 45.83 3.41
2888 10486 6.251376 GTGCGTTGGATCAAATTAAAGCTTAG 59.749 38.462 0.00 0.00 0.00 2.18
2902 10500 1.907255 AGCTTAGCTTAACGGGAAGGT 59.093 47.619 0.00 8.13 40.22 3.50
2906 10504 2.180432 AGCTTAACGGGAAGGTGAAC 57.820 50.000 2.87 0.00 35.86 3.18
2979 10912 8.836268 ATCAGTTTTAGTTTTCACCGTATACA 57.164 30.769 3.32 0.00 0.00 2.29
2980 10913 8.836268 TCAGTTTTAGTTTTCACCGTATACAT 57.164 30.769 3.32 0.00 0.00 2.29
2987 10920 7.998753 AGTTTTCACCGTATACATTACTAGC 57.001 36.000 3.32 0.00 0.00 3.42
2994 10927 5.751990 ACCGTATACATTACTAGCTGTTTGC 59.248 40.000 3.32 0.00 43.29 3.68
3018 10951 7.391554 TGCGTTAATCTATATACTACCTCCGTT 59.608 37.037 0.00 0.00 0.00 4.44
3020 10953 9.160496 CGTTAATCTATATACTACCTCCGTTCT 57.840 37.037 0.00 0.00 0.00 3.01
3035 10968 2.490509 CCGTTCTGGTTTATTTGTCCCC 59.509 50.000 0.00 0.00 0.00 4.81
3043 10976 5.572252 TGGTTTATTTGTCCCCTTCGTATT 58.428 37.500 0.00 0.00 0.00 1.89
3138 11071 8.052313 ACCGTTAAAATTTGACACAAAATACG 57.948 30.769 1.71 0.00 31.95 3.06
3150 11083 6.038825 TGACACAAAATACGAAGTGAACCAAT 59.961 34.615 0.00 0.00 45.73 3.16
3151 11084 7.226918 TGACACAAAATACGAAGTGAACCAATA 59.773 33.333 0.00 0.00 45.73 1.90
3152 11085 7.932335 ACACAAAATACGAAGTGAACCAATAA 58.068 30.769 0.00 0.00 45.73 1.40
3153 11086 8.407064 ACACAAAATACGAAGTGAACCAATAAA 58.593 29.630 0.00 0.00 45.73 1.40
3154 11087 8.687301 CACAAAATACGAAGTGAACCAATAAAC 58.313 33.333 0.00 0.00 45.73 2.01
3155 11088 7.863877 ACAAAATACGAAGTGAACCAATAAACC 59.136 33.333 0.00 0.00 45.73 3.27
3156 11089 7.513371 AAATACGAAGTGAACCAATAAACCA 57.487 32.000 0.00 0.00 45.73 3.67
3157 11090 6.737254 ATACGAAGTGAACCAATAAACCAG 57.263 37.500 0.00 0.00 45.73 4.00
3158 11091 3.818773 ACGAAGTGAACCAATAAACCAGG 59.181 43.478 0.00 0.00 42.51 4.45
3159 11092 4.069304 CGAAGTGAACCAATAAACCAGGA 58.931 43.478 0.00 0.00 0.00 3.86
3160 11093 4.700213 CGAAGTGAACCAATAAACCAGGAT 59.300 41.667 0.00 0.00 0.00 3.24
3161 11094 5.391950 CGAAGTGAACCAATAAACCAGGATG 60.392 44.000 0.00 0.00 0.00 3.51
3204 11137 9.686683 ATATATAAGATGCAACCCACTAATTCC 57.313 33.333 0.00 0.00 0.00 3.01
3205 11138 4.322057 AAGATGCAACCCACTAATTCCT 57.678 40.909 0.00 0.00 0.00 3.36
3206 11139 5.450818 AAGATGCAACCCACTAATTCCTA 57.549 39.130 0.00 0.00 0.00 2.94
3207 11140 5.653255 AGATGCAACCCACTAATTCCTAT 57.347 39.130 0.00 0.00 0.00 2.57
3208 11141 6.018433 AGATGCAACCCACTAATTCCTATT 57.982 37.500 0.00 0.00 0.00 1.73
3209 11142 6.435164 AGATGCAACCCACTAATTCCTATTT 58.565 36.000 0.00 0.00 0.00 1.40
3210 11143 5.913137 TGCAACCCACTAATTCCTATTTG 57.087 39.130 0.00 0.00 0.00 2.32
3211 11144 5.329399 TGCAACCCACTAATTCCTATTTGT 58.671 37.500 0.00 0.00 31.27 2.83
3212 11145 5.417580 TGCAACCCACTAATTCCTATTTGTC 59.582 40.000 0.00 0.00 29.14 3.18
3213 11146 5.652452 GCAACCCACTAATTCCTATTTGTCT 59.348 40.000 0.00 0.00 29.14 3.41
3214 11147 6.152831 GCAACCCACTAATTCCTATTTGTCTT 59.847 38.462 0.00 0.00 29.14 3.01
3215 11148 7.338449 GCAACCCACTAATTCCTATTTGTCTTA 59.662 37.037 0.00 0.00 29.14 2.10
3216 11149 8.893727 CAACCCACTAATTCCTATTTGTCTTAG 58.106 37.037 0.00 0.00 29.14 2.18
3217 11150 8.388656 ACCCACTAATTCCTATTTGTCTTAGA 57.611 34.615 0.00 0.00 29.14 2.10
3218 11151 9.004231 ACCCACTAATTCCTATTTGTCTTAGAT 57.996 33.333 0.00 0.00 29.14 1.98
3219 11152 9.277783 CCCACTAATTCCTATTTGTCTTAGATG 57.722 37.037 0.00 0.00 29.14 2.90
3228 11161 9.973661 TCCTATTTGTCTTAGATGAAAATTGGA 57.026 29.630 17.69 17.69 38.74 3.53
3234 11167 9.465199 TTGTCTTAGATGAAAATTGGATGATCA 57.535 29.630 0.00 0.00 0.00 2.92
3235 11168 9.465199 TGTCTTAGATGAAAATTGGATGATCAA 57.535 29.630 0.00 0.00 0.00 2.57
3236 11169 9.727627 GTCTTAGATGAAAATTGGATGATCAAC 57.272 33.333 0.00 0.00 0.00 3.18
3237 11170 9.690913 TCTTAGATGAAAATTGGATGATCAACT 57.309 29.630 0.00 0.00 0.00 3.16
3240 11173 8.357290 AGATGAAAATTGGATGATCAACTTGA 57.643 30.769 0.00 0.00 0.00 3.02
3241 11174 8.248945 AGATGAAAATTGGATGATCAACTTGAC 58.751 33.333 0.00 0.00 0.00 3.18
3242 11175 7.528996 TGAAAATTGGATGATCAACTTGACT 57.471 32.000 0.00 0.00 0.00 3.41
3243 11176 7.372714 TGAAAATTGGATGATCAACTTGACTG 58.627 34.615 0.00 0.00 0.00 3.51
3244 11177 4.978083 ATTGGATGATCAACTTGACTGC 57.022 40.909 0.00 0.00 0.00 4.40
3245 11178 3.708403 TGGATGATCAACTTGACTGCT 57.292 42.857 0.00 0.00 0.00 4.24
3246 11179 3.603532 TGGATGATCAACTTGACTGCTC 58.396 45.455 0.00 0.00 0.00 4.26
3247 11180 3.262660 TGGATGATCAACTTGACTGCTCT 59.737 43.478 0.00 0.00 0.00 4.09
3248 11181 4.467438 TGGATGATCAACTTGACTGCTCTA 59.533 41.667 0.00 0.00 0.00 2.43
3249 11182 5.049167 GGATGATCAACTTGACTGCTCTAG 58.951 45.833 0.00 0.00 0.00 2.43
3250 11183 3.854666 TGATCAACTTGACTGCTCTAGC 58.145 45.455 0.00 0.00 42.50 3.42
3251 11184 3.513119 TGATCAACTTGACTGCTCTAGCT 59.487 43.478 3.26 0.00 42.66 3.32
3252 11185 3.309961 TCAACTTGACTGCTCTAGCTG 57.690 47.619 0.00 7.24 44.21 4.24
3253 11186 1.731160 CAACTTGACTGCTCTAGCTGC 59.269 52.381 8.57 0.00 42.72 5.25
3254 11187 1.265236 ACTTGACTGCTCTAGCTGCT 58.735 50.000 7.57 7.57 42.72 4.24
3255 11188 2.451490 ACTTGACTGCTCTAGCTGCTA 58.549 47.619 9.34 9.34 42.72 3.49
3256 11189 2.165437 ACTTGACTGCTCTAGCTGCTAC 59.835 50.000 5.02 0.00 42.72 3.58
3257 11190 1.839424 TGACTGCTCTAGCTGCTACA 58.161 50.000 5.02 1.82 42.72 2.74
3258 11191 2.171003 TGACTGCTCTAGCTGCTACAA 58.829 47.619 5.02 0.00 42.72 2.41
3259 11192 2.094494 TGACTGCTCTAGCTGCTACAAC 60.094 50.000 5.02 0.00 42.72 3.32
3260 11193 1.205893 ACTGCTCTAGCTGCTACAACC 59.794 52.381 5.02 0.00 42.72 3.77
3261 11194 0.173481 TGCTCTAGCTGCTACAACCG 59.827 55.000 5.02 0.00 42.66 4.44
3262 11195 0.456221 GCTCTAGCTGCTACAACCGA 59.544 55.000 5.02 0.39 38.21 4.69
3263 11196 1.135083 GCTCTAGCTGCTACAACCGAA 60.135 52.381 5.02 0.00 38.21 4.30
3264 11197 2.531206 CTCTAGCTGCTACAACCGAAC 58.469 52.381 5.02 0.00 0.00 3.95
3265 11198 2.164624 CTCTAGCTGCTACAACCGAACT 59.835 50.000 5.02 0.00 0.00 3.01
3266 11199 2.561419 TCTAGCTGCTACAACCGAACTT 59.439 45.455 5.02 0.00 0.00 2.66
3267 11200 1.797025 AGCTGCTACAACCGAACTTC 58.203 50.000 0.00 0.00 0.00 3.01
3268 11201 1.344763 AGCTGCTACAACCGAACTTCT 59.655 47.619 0.00 0.00 0.00 2.85
3269 11202 1.727335 GCTGCTACAACCGAACTTCTC 59.273 52.381 0.00 0.00 0.00 2.87
3270 11203 2.866460 GCTGCTACAACCGAACTTCTCA 60.866 50.000 0.00 0.00 0.00 3.27
3271 11204 3.589988 CTGCTACAACCGAACTTCTCAT 58.410 45.455 0.00 0.00 0.00 2.90
3272 11205 4.744570 CTGCTACAACCGAACTTCTCATA 58.255 43.478 0.00 0.00 0.00 2.15
3273 11206 4.744570 TGCTACAACCGAACTTCTCATAG 58.255 43.478 0.00 0.00 0.00 2.23
3274 11207 4.461431 TGCTACAACCGAACTTCTCATAGA 59.539 41.667 0.00 0.00 0.00 1.98
3275 11208 5.047590 TGCTACAACCGAACTTCTCATAGAA 60.048 40.000 0.00 0.00 32.50 2.10
3276 11209 6.043411 GCTACAACCGAACTTCTCATAGAAT 58.957 40.000 0.00 0.00 33.13 2.40
3277 11210 6.535508 GCTACAACCGAACTTCTCATAGAATT 59.464 38.462 0.00 0.00 33.13 2.17
3278 11211 6.969828 ACAACCGAACTTCTCATAGAATTC 57.030 37.500 0.00 0.00 33.13 2.17
3279 11212 5.875359 ACAACCGAACTTCTCATAGAATTCC 59.125 40.000 0.65 0.00 33.13 3.01
3280 11213 5.024785 ACCGAACTTCTCATAGAATTCCC 57.975 43.478 0.65 0.00 33.13 3.97
3281 11214 4.051922 CCGAACTTCTCATAGAATTCCCG 58.948 47.826 0.65 0.00 33.13 5.14
3282 11215 3.491267 CGAACTTCTCATAGAATTCCCGC 59.509 47.826 0.65 0.00 33.13 6.13
3283 11216 4.698575 GAACTTCTCATAGAATTCCCGCT 58.301 43.478 0.65 0.00 33.13 5.52
3284 11217 4.065321 ACTTCTCATAGAATTCCCGCTG 57.935 45.455 0.65 0.00 33.13 5.18
3285 11218 3.706594 ACTTCTCATAGAATTCCCGCTGA 59.293 43.478 0.65 0.00 33.13 4.26
3286 11219 4.346418 ACTTCTCATAGAATTCCCGCTGAT 59.654 41.667 0.65 0.00 33.13 2.90
3287 11220 4.263018 TCTCATAGAATTCCCGCTGATG 57.737 45.455 0.65 0.00 0.00 3.07
3288 11221 3.007290 TCTCATAGAATTCCCGCTGATGG 59.993 47.826 0.65 0.00 0.00 3.51
3289 11222 1.808945 CATAGAATTCCCGCTGATGGC 59.191 52.381 0.65 0.00 37.64 4.40
3290 11223 0.108585 TAGAATTCCCGCTGATGGCC 59.891 55.000 0.65 0.00 37.74 5.36
3291 11224 2.123726 AATTCCCGCTGATGGCCC 60.124 61.111 0.00 0.00 37.74 5.80
3292 11225 2.631012 GAATTCCCGCTGATGGCCCT 62.631 60.000 0.00 0.00 37.74 5.19
3293 11226 1.352622 AATTCCCGCTGATGGCCCTA 61.353 55.000 0.00 0.00 37.74 3.53
3294 11227 1.136329 ATTCCCGCTGATGGCCCTAT 61.136 55.000 0.00 0.00 37.74 2.57
3295 11228 2.033141 CCCGCTGATGGCCCTATG 59.967 66.667 0.00 0.00 37.74 2.23
3296 11229 2.670934 CCGCTGATGGCCCTATGC 60.671 66.667 0.00 0.00 37.74 3.14
3322 11255 3.219224 GCCGTCGGGGGTGTTATA 58.781 61.111 14.38 0.00 35.78 0.98
3323 11256 1.750297 GCCGTCGGGGGTGTTATAT 59.250 57.895 14.38 0.00 35.78 0.86
3324 11257 0.320160 GCCGTCGGGGGTGTTATATC 60.320 60.000 14.38 0.00 35.78 1.63
3325 11258 0.319405 CCGTCGGGGGTGTTATATCC 59.681 60.000 2.34 0.00 0.00 2.59
3331 11264 2.265589 GGGGTGTTATATCCCGGTTG 57.734 55.000 0.00 0.00 40.80 3.77
3332 11265 1.491754 GGGGTGTTATATCCCGGTTGT 59.508 52.381 0.00 0.00 40.80 3.32
3333 11266 2.567985 GGGTGTTATATCCCGGTTGTG 58.432 52.381 0.00 0.00 33.97 3.33
3334 11267 2.171027 GGGTGTTATATCCCGGTTGTGA 59.829 50.000 0.00 0.00 33.97 3.58
3335 11268 3.463944 GGTGTTATATCCCGGTTGTGAG 58.536 50.000 0.00 0.00 0.00 3.51
3336 11269 3.133362 GGTGTTATATCCCGGTTGTGAGA 59.867 47.826 0.00 0.00 0.00 3.27
3337 11270 4.202326 GGTGTTATATCCCGGTTGTGAGAT 60.202 45.833 0.00 0.00 0.00 2.75
3338 11271 4.750098 GTGTTATATCCCGGTTGTGAGATG 59.250 45.833 0.00 0.00 0.00 2.90
3339 11272 4.202315 TGTTATATCCCGGTTGTGAGATGG 60.202 45.833 0.00 0.00 0.00 3.51
3340 11273 1.128200 TATCCCGGTTGTGAGATGGG 58.872 55.000 0.00 0.00 41.43 4.00
3341 11274 0.914417 ATCCCGGTTGTGAGATGGGT 60.914 55.000 0.00 0.00 40.86 4.51
3342 11275 1.131303 TCCCGGTTGTGAGATGGGTT 61.131 55.000 0.00 0.00 40.86 4.11
3343 11276 0.676782 CCCGGTTGTGAGATGGGTTC 60.677 60.000 0.00 0.00 35.05 3.62
3344 11277 1.019278 CCGGTTGTGAGATGGGTTCG 61.019 60.000 0.00 0.00 0.00 3.95
3345 11278 0.320421 CGGTTGTGAGATGGGTTCGT 60.320 55.000 0.00 0.00 0.00 3.85
3346 11279 1.876416 CGGTTGTGAGATGGGTTCGTT 60.876 52.381 0.00 0.00 0.00 3.85
3347 11280 1.804748 GGTTGTGAGATGGGTTCGTTC 59.195 52.381 0.00 0.00 0.00 3.95
3348 11281 2.489971 GTTGTGAGATGGGTTCGTTCA 58.510 47.619 0.00 0.00 0.00 3.18
3349 11282 2.163818 TGTGAGATGGGTTCGTTCAC 57.836 50.000 0.00 0.00 38.82 3.18
3350 11283 1.414550 TGTGAGATGGGTTCGTTCACA 59.585 47.619 1.82 1.82 44.03 3.58
3351 11284 2.069273 GTGAGATGGGTTCGTTCACAG 58.931 52.381 0.00 0.00 38.36 3.66
3352 11285 1.079503 GAGATGGGTTCGTTCACAGC 58.920 55.000 0.00 0.00 0.00 4.40
3353 11286 0.321653 AGATGGGTTCGTTCACAGCC 60.322 55.000 0.00 0.00 0.00 4.85
3354 11287 0.321653 GATGGGTTCGTTCACAGCCT 60.322 55.000 0.00 0.00 0.00 4.58
3355 11288 0.606401 ATGGGTTCGTTCACAGCCTG 60.606 55.000 0.00 0.00 0.00 4.85
3356 11289 1.070786 GGGTTCGTTCACAGCCTGA 59.929 57.895 0.00 0.00 0.00 3.86
3357 11290 0.951040 GGGTTCGTTCACAGCCTGAG 60.951 60.000 0.00 0.00 0.00 3.35
3358 11291 0.249911 GGTTCGTTCACAGCCTGAGT 60.250 55.000 0.00 0.00 0.00 3.41
3359 11292 1.140816 GTTCGTTCACAGCCTGAGTC 58.859 55.000 0.00 0.00 0.00 3.36
3360 11293 0.318699 TTCGTTCACAGCCTGAGTCG 60.319 55.000 0.00 1.11 32.72 4.18
3361 11294 1.007271 CGTTCACAGCCTGAGTCGT 60.007 57.895 0.00 0.00 0.00 4.34
3362 11295 1.278172 CGTTCACAGCCTGAGTCGTG 61.278 60.000 0.00 0.00 0.00 4.35
3363 11296 1.300931 TTCACAGCCTGAGTCGTGC 60.301 57.895 0.00 0.00 0.00 5.34
3364 11297 2.026945 TTCACAGCCTGAGTCGTGCA 62.027 55.000 0.00 0.00 0.00 4.57
3365 11298 1.375140 CACAGCCTGAGTCGTGCAT 60.375 57.895 0.00 0.00 0.00 3.96
3366 11299 1.375140 ACAGCCTGAGTCGTGCATG 60.375 57.895 0.00 0.00 0.00 4.06
3367 11300 2.435586 AGCCTGAGTCGTGCATGC 60.436 61.111 11.82 11.82 0.00 4.06
3368 11301 2.743538 GCCTGAGTCGTGCATGCA 60.744 61.111 18.46 18.46 0.00 3.96
3369 11302 2.110967 GCCTGAGTCGTGCATGCAT 61.111 57.895 25.64 7.59 0.00 3.96
3370 11303 1.719709 CCTGAGTCGTGCATGCATG 59.280 57.895 30.20 30.20 0.00 4.06
3371 11304 1.022982 CCTGAGTCGTGCATGCATGT 61.023 55.000 33.08 19.43 34.75 3.21
3372 11305 0.096454 CTGAGTCGTGCATGCATGTG 59.904 55.000 33.08 21.74 34.75 3.21
3373 11306 0.320596 TGAGTCGTGCATGCATGTGA 60.321 50.000 33.08 23.43 34.75 3.58
3374 11307 0.372679 GAGTCGTGCATGCATGTGAG 59.627 55.000 33.08 18.31 34.75 3.51
3375 11308 1.226211 GTCGTGCATGCATGTGAGC 60.226 57.895 33.08 20.15 34.75 4.26
3376 11309 1.376295 TCGTGCATGCATGTGAGCT 60.376 52.632 33.08 0.00 34.75 4.09
3377 11310 1.226295 CGTGCATGCATGTGAGCTG 60.226 57.895 28.25 8.52 34.99 4.24
3378 11311 1.641123 CGTGCATGCATGTGAGCTGA 61.641 55.000 28.25 0.00 34.99 4.26
3379 11312 0.524414 GTGCATGCATGTGAGCTGAA 59.476 50.000 25.64 0.00 34.99 3.02
3380 11313 1.134367 GTGCATGCATGTGAGCTGAAT 59.866 47.619 25.64 0.00 34.99 2.57
3381 11314 1.134175 TGCATGCATGTGAGCTGAATG 59.866 47.619 26.79 0.00 34.99 2.67
3382 11315 1.404035 GCATGCATGTGAGCTGAATGA 59.596 47.619 26.79 0.00 34.99 2.57
3383 11316 2.541794 GCATGCATGTGAGCTGAATGAG 60.542 50.000 26.79 0.00 34.99 2.90
3394 11327 1.250328 CTGAATGAGCAAACCTGGCA 58.750 50.000 0.00 0.00 0.00 4.92
3395 11328 1.822990 CTGAATGAGCAAACCTGGCAT 59.177 47.619 0.00 0.00 0.00 4.40
3396 11329 3.018856 CTGAATGAGCAAACCTGGCATA 58.981 45.455 0.00 0.00 0.00 3.14
3397 11330 3.634504 TGAATGAGCAAACCTGGCATAT 58.365 40.909 0.00 0.00 0.00 1.78
3398 11331 3.382227 TGAATGAGCAAACCTGGCATATG 59.618 43.478 0.00 0.00 0.00 1.78
3399 11332 2.512692 TGAGCAAACCTGGCATATGT 57.487 45.000 4.29 0.00 0.00 2.29
3400 11333 2.093890 TGAGCAAACCTGGCATATGTG 58.906 47.619 4.29 0.00 0.00 3.21
3401 11334 2.290832 TGAGCAAACCTGGCATATGTGA 60.291 45.455 4.29 0.00 0.00 3.58
3402 11335 2.754552 GAGCAAACCTGGCATATGTGAA 59.245 45.455 4.29 0.00 0.00 3.18
3403 11336 2.756760 AGCAAACCTGGCATATGTGAAG 59.243 45.455 4.29 0.00 0.00 3.02
3404 11337 2.159198 GCAAACCTGGCATATGTGAAGG 60.159 50.000 15.06 15.06 36.99 3.46
3405 11338 1.767759 AACCTGGCATATGTGAAGGC 58.232 50.000 16.05 0.00 35.31 4.35
3406 11339 0.921896 ACCTGGCATATGTGAAGGCT 59.078 50.000 16.05 0.00 35.31 4.58
3407 11340 1.285962 ACCTGGCATATGTGAAGGCTT 59.714 47.619 16.05 0.00 35.31 4.35
3408 11341 2.509548 ACCTGGCATATGTGAAGGCTTA 59.490 45.455 16.05 0.00 35.31 3.09
3409 11342 3.139025 ACCTGGCATATGTGAAGGCTTAT 59.861 43.478 16.05 0.00 35.31 1.73
3410 11343 4.147321 CCTGGCATATGTGAAGGCTTATT 58.853 43.478 0.00 0.00 0.00 1.40
3411 11344 5.163099 ACCTGGCATATGTGAAGGCTTATTA 60.163 40.000 16.05 0.00 35.31 0.98
3412 11345 5.413833 CCTGGCATATGTGAAGGCTTATTAG 59.586 44.000 0.00 0.00 0.00 1.73
3433 11366 3.256285 CAAAATTGGTGTTGCATGTGC 57.744 42.857 0.00 0.00 42.50 4.57
3434 11367 2.873472 CAAAATTGGTGTTGCATGTGCT 59.127 40.909 6.55 0.00 42.66 4.40
3435 11368 2.914695 AATTGGTGTTGCATGTGCTT 57.085 40.000 6.55 0.00 42.66 3.91
3436 11369 2.157834 ATTGGTGTTGCATGTGCTTG 57.842 45.000 6.55 0.00 42.66 4.01
3437 11370 0.822811 TTGGTGTTGCATGTGCTTGT 59.177 45.000 6.55 0.00 42.66 3.16
3438 11371 1.685148 TGGTGTTGCATGTGCTTGTA 58.315 45.000 6.55 0.00 42.66 2.41
3439 11372 1.608109 TGGTGTTGCATGTGCTTGTAG 59.392 47.619 6.55 0.00 42.66 2.74
3440 11373 1.666888 GGTGTTGCATGTGCTTGTAGC 60.667 52.381 6.55 0.00 42.82 3.58
3454 11387 5.017294 GCTTGTAGCAGAGATAAACTCCT 57.983 43.478 0.00 0.00 45.96 3.69
3455 11388 6.150396 GCTTGTAGCAGAGATAAACTCCTA 57.850 41.667 0.00 0.00 45.96 2.94
3456 11389 6.212955 GCTTGTAGCAGAGATAAACTCCTAG 58.787 44.000 0.00 0.00 45.96 3.02
3457 11390 6.716934 TTGTAGCAGAGATAAACTCCTAGG 57.283 41.667 0.82 0.82 45.96 3.02
3458 11391 6.014771 TGTAGCAGAGATAAACTCCTAGGA 57.985 41.667 11.98 11.98 45.96 2.94
3459 11392 6.615617 TGTAGCAGAGATAAACTCCTAGGAT 58.384 40.000 13.12 0.00 45.96 3.24
3460 11393 7.069986 TGTAGCAGAGATAAACTCCTAGGATT 58.930 38.462 13.12 7.43 45.96 3.01
3461 11394 7.565398 TGTAGCAGAGATAAACTCCTAGGATTT 59.435 37.037 13.12 10.58 45.96 2.17
3462 11395 7.444703 AGCAGAGATAAACTCCTAGGATTTT 57.555 36.000 25.30 25.30 45.96 1.82
3463 11396 7.866870 AGCAGAGATAAACTCCTAGGATTTTT 58.133 34.615 26.64 22.07 45.96 1.94
3464 11397 7.990314 AGCAGAGATAAACTCCTAGGATTTTTC 59.010 37.037 26.64 21.88 45.96 2.29
3465 11398 7.227711 GCAGAGATAAACTCCTAGGATTTTTCC 59.772 40.741 26.64 19.22 45.96 3.13
3466 11399 8.490311 CAGAGATAAACTCCTAGGATTTTTCCT 58.510 37.037 26.64 22.45 45.96 3.36
3467 11400 8.710239 AGAGATAAACTCCTAGGATTTTTCCTC 58.290 37.037 26.64 26.84 45.96 3.71
3468 11401 8.631275 AGATAAACTCCTAGGATTTTTCCTCT 57.369 34.615 26.64 21.79 41.12 3.69
3469 11402 8.710239 AGATAAACTCCTAGGATTTTTCCTCTC 58.290 37.037 26.64 16.83 41.12 3.20
3470 11403 6.704056 AAACTCCTAGGATTTTTCCTCTCA 57.296 37.500 18.76 0.00 41.12 3.27
3471 11404 6.899892 AACTCCTAGGATTTTTCCTCTCAT 57.100 37.500 13.12 0.00 41.12 2.90
3472 11405 6.899892 ACTCCTAGGATTTTTCCTCTCATT 57.100 37.500 13.12 0.00 41.12 2.57
3473 11406 6.894682 ACTCCTAGGATTTTTCCTCTCATTC 58.105 40.000 13.12 0.00 41.12 2.67
3474 11407 5.918608 TCCTAGGATTTTTCCTCTCATTCG 58.081 41.667 7.62 0.00 41.12 3.34
3475 11408 4.513318 CCTAGGATTTTTCCTCTCATTCGC 59.487 45.833 1.05 0.00 41.12 4.70
3476 11409 3.282885 AGGATTTTTCCTCTCATTCGCC 58.717 45.455 0.00 0.00 34.41 5.54
3477 11410 3.016736 GGATTTTTCCTCTCATTCGCCA 58.983 45.455 0.00 0.00 0.00 5.69
3478 11411 3.633986 GGATTTTTCCTCTCATTCGCCAT 59.366 43.478 0.00 0.00 0.00 4.40
3479 11412 4.498682 GGATTTTTCCTCTCATTCGCCATG 60.499 45.833 0.00 0.00 0.00 3.66
3480 11413 2.787473 TTTCCTCTCATTCGCCATGT 57.213 45.000 0.00 0.00 34.06 3.21
3481 11414 2.787473 TTCCTCTCATTCGCCATGTT 57.213 45.000 0.00 0.00 34.06 2.71
3482 11415 2.787473 TCCTCTCATTCGCCATGTTT 57.213 45.000 0.00 0.00 34.06 2.83
3483 11416 3.904800 TCCTCTCATTCGCCATGTTTA 57.095 42.857 0.00 0.00 34.06 2.01
3484 11417 4.214986 TCCTCTCATTCGCCATGTTTAA 57.785 40.909 0.00 0.00 34.06 1.52
3485 11418 4.584874 TCCTCTCATTCGCCATGTTTAAA 58.415 39.130 0.00 0.00 34.06 1.52
3486 11419 5.007034 TCCTCTCATTCGCCATGTTTAAAA 58.993 37.500 0.00 0.00 34.06 1.52
3487 11420 5.095490 CCTCTCATTCGCCATGTTTAAAAC 58.905 41.667 0.00 0.00 34.06 2.43
3488 11421 5.335583 CCTCTCATTCGCCATGTTTAAAACA 60.336 40.000 0.00 0.00 46.94 2.83
3498 11431 3.992260 TGTTTAAAACATCCCCGTGTG 57.008 42.857 0.00 0.00 36.25 3.82
3499 11432 2.034812 TGTTTAAAACATCCCCGTGTGC 59.965 45.455 0.00 0.00 36.25 4.57
3500 11433 0.875728 TTAAAACATCCCCGTGTGCG 59.124 50.000 0.00 0.00 37.95 5.34
3501 11434 1.579084 TAAAACATCCCCGTGTGCGC 61.579 55.000 0.00 0.00 36.67 6.09
3512 11445 4.710695 TGTGCGCGTGACGGGTAG 62.711 66.667 22.63 0.00 43.93 3.18
3513 11446 4.409218 GTGCGCGTGACGGGTAGA 62.409 66.667 22.63 5.28 43.93 2.59
3514 11447 4.409218 TGCGCGTGACGGGTAGAC 62.409 66.667 22.63 7.14 43.93 2.59
3516 11449 3.740397 CGCGTGACGGGTAGACCA 61.740 66.667 14.17 0.00 40.22 4.02
3517 11450 2.126189 GCGTGACGGGTAGACCAC 60.126 66.667 7.25 0.00 40.22 4.16
3518 11451 2.922950 GCGTGACGGGTAGACCACA 61.923 63.158 7.25 0.00 40.22 4.17
3519 11452 1.080974 CGTGACGGGTAGACCACAC 60.081 63.158 0.00 6.88 40.47 3.82
3520 11453 1.291272 GTGACGGGTAGACCACACC 59.709 63.158 0.21 0.00 39.03 4.16
3524 11457 2.976356 GGGTAGACCACACCCGTC 59.024 66.667 0.21 0.00 46.09 4.79
3525 11458 1.608627 GGGTAGACCACACCCGTCT 60.609 63.158 0.21 0.00 46.09 4.18
3526 11459 1.602327 GGGTAGACCACACCCGTCTC 61.602 65.000 0.21 0.00 46.09 3.36
3527 11460 1.505353 GTAGACCACACCCGTCTCG 59.495 63.158 0.00 0.00 40.93 4.04
3537 11470 2.184579 CCGTCTCGGGCCTTCTTC 59.815 66.667 0.84 0.00 44.15 2.87
3538 11471 2.184579 CGTCTCGGGCCTTCTTCC 59.815 66.667 0.84 0.00 0.00 3.46
3539 11472 2.585153 GTCTCGGGCCTTCTTCCC 59.415 66.667 0.84 0.00 40.43 3.97
3540 11473 2.687566 TCTCGGGCCTTCTTCCCC 60.688 66.667 0.84 0.00 40.75 4.81
3541 11474 3.798511 CTCGGGCCTTCTTCCCCC 61.799 72.222 0.84 0.00 40.75 5.40
3542 11475 4.667935 TCGGGCCTTCTTCCCCCA 62.668 66.667 0.84 0.00 40.75 4.96
3543 11476 3.657350 CGGGCCTTCTTCCCCCAA 61.657 66.667 0.84 0.00 40.75 4.12
3544 11477 2.996330 CGGGCCTTCTTCCCCCAAT 61.996 63.158 0.84 0.00 40.75 3.16
3545 11478 1.641552 CGGGCCTTCTTCCCCCAATA 61.642 60.000 0.84 0.00 40.75 1.90
3546 11479 0.106167 GGGCCTTCTTCCCCCAATAC 60.106 60.000 0.84 0.00 38.70 1.89
3547 11480 0.106167 GGCCTTCTTCCCCCAATACC 60.106 60.000 0.00 0.00 0.00 2.73
3548 11481 0.106167 GCCTTCTTCCCCCAATACCC 60.106 60.000 0.00 0.00 0.00 3.69
3549 11482 0.556258 CCTTCTTCCCCCAATACCCC 59.444 60.000 0.00 0.00 0.00 4.95
3550 11483 0.182775 CTTCTTCCCCCAATACCCCG 59.817 60.000 0.00 0.00 0.00 5.73
3551 11484 0.550638 TTCTTCCCCCAATACCCCGT 60.551 55.000 0.00 0.00 0.00 5.28
3552 11485 0.550638 TCTTCCCCCAATACCCCGTT 60.551 55.000 0.00 0.00 0.00 4.44
3553 11486 0.106868 CTTCCCCCAATACCCCGTTC 60.107 60.000 0.00 0.00 0.00 3.95
3554 11487 1.912826 TTCCCCCAATACCCCGTTCG 61.913 60.000 0.00 0.00 0.00 3.95
3555 11488 2.672181 CCCCCAATACCCCGTTCGT 61.672 63.158 0.00 0.00 0.00 3.85
3556 11489 1.153309 CCCCAATACCCCGTTCGTC 60.153 63.158 0.00 0.00 0.00 4.20
3557 11490 1.619807 CCCCAATACCCCGTTCGTCT 61.620 60.000 0.00 0.00 0.00 4.18
3558 11491 0.179092 CCCAATACCCCGTTCGTCTC 60.179 60.000 0.00 0.00 0.00 3.36
3559 11492 0.822164 CCAATACCCCGTTCGTCTCT 59.178 55.000 0.00 0.00 0.00 3.10
3560 11493 1.202382 CCAATACCCCGTTCGTCTCTC 60.202 57.143 0.00 0.00 0.00 3.20
3561 11494 1.749634 CAATACCCCGTTCGTCTCTCT 59.250 52.381 0.00 0.00 0.00 3.10
3562 11495 2.140839 ATACCCCGTTCGTCTCTCTT 57.859 50.000 0.00 0.00 0.00 2.85
3563 11496 1.457346 TACCCCGTTCGTCTCTCTTC 58.543 55.000 0.00 0.00 0.00 2.87
3564 11497 0.538977 ACCCCGTTCGTCTCTCTTCA 60.539 55.000 0.00 0.00 0.00 3.02
3565 11498 0.171455 CCCCGTTCGTCTCTCTTCAG 59.829 60.000 0.00 0.00 0.00 3.02
3566 11499 0.456995 CCCGTTCGTCTCTCTTCAGC 60.457 60.000 0.00 0.00 0.00 4.26
3567 11500 0.794981 CCGTTCGTCTCTCTTCAGCG 60.795 60.000 0.00 0.00 0.00 5.18
3568 11501 0.110147 CGTTCGTCTCTCTTCAGCGT 60.110 55.000 0.00 0.00 0.00 5.07
3569 11502 1.608822 GTTCGTCTCTCTTCAGCGTC 58.391 55.000 0.00 0.00 0.00 5.19
3570 11503 1.198178 GTTCGTCTCTCTTCAGCGTCT 59.802 52.381 0.00 0.00 0.00 4.18
3571 11504 1.080298 TCGTCTCTCTTCAGCGTCTC 58.920 55.000 0.00 0.00 0.00 3.36
3572 11505 0.247497 CGTCTCTCTTCAGCGTCTCG 60.247 60.000 0.00 0.00 0.00 4.04
3573 11506 1.080298 GTCTCTCTTCAGCGTCTCGA 58.920 55.000 0.00 0.00 0.00 4.04
3574 11507 1.080298 TCTCTCTTCAGCGTCTCGAC 58.920 55.000 0.00 0.00 0.00 4.20
3575 11508 0.799393 CTCTCTTCAGCGTCTCGACA 59.201 55.000 0.00 0.00 0.00 4.35
3576 11509 1.197949 CTCTCTTCAGCGTCTCGACAA 59.802 52.381 0.00 0.00 0.00 3.18
3577 11510 1.607148 TCTCTTCAGCGTCTCGACAAA 59.393 47.619 0.00 0.00 0.00 2.83
3578 11511 2.034179 TCTCTTCAGCGTCTCGACAAAA 59.966 45.455 0.00 0.00 0.00 2.44
3579 11512 2.794910 CTCTTCAGCGTCTCGACAAAAA 59.205 45.455 0.00 0.00 0.00 1.94
3599 11532 5.554822 AAAATATTGGCTGCTGCATTTTG 57.445 34.783 17.89 0.00 41.91 2.44
3600 11533 3.899052 ATATTGGCTGCTGCATTTTGT 57.101 38.095 17.89 0.00 41.91 2.83
3601 11534 2.554370 ATTGGCTGCTGCATTTTGTT 57.446 40.000 17.89 0.00 41.91 2.83
3602 11535 3.681593 ATTGGCTGCTGCATTTTGTTA 57.318 38.095 17.89 0.00 41.91 2.41
3603 11536 2.437200 TGGCTGCTGCATTTTGTTAC 57.563 45.000 17.89 0.00 41.91 2.50
3604 11537 1.962807 TGGCTGCTGCATTTTGTTACT 59.037 42.857 17.89 0.00 41.91 2.24
3605 11538 2.364970 TGGCTGCTGCATTTTGTTACTT 59.635 40.909 17.89 0.00 41.91 2.24
3606 11539 2.733026 GGCTGCTGCATTTTGTTACTTG 59.267 45.455 17.89 0.00 41.91 3.16
3607 11540 3.383761 GCTGCTGCATTTTGTTACTTGT 58.616 40.909 11.11 0.00 39.41 3.16
3608 11541 3.803778 GCTGCTGCATTTTGTTACTTGTT 59.196 39.130 11.11 0.00 39.41 2.83
3609 11542 4.318263 GCTGCTGCATTTTGTTACTTGTTG 60.318 41.667 11.11 0.00 39.41 3.33
3610 11543 4.753233 TGCTGCATTTTGTTACTTGTTGT 58.247 34.783 0.00 0.00 0.00 3.32
3611 11544 4.803088 TGCTGCATTTTGTTACTTGTTGTC 59.197 37.500 0.00 0.00 0.00 3.18
3612 11545 4.209080 GCTGCATTTTGTTACTTGTTGTCC 59.791 41.667 0.00 0.00 0.00 4.02
3613 11546 4.355437 TGCATTTTGTTACTTGTTGTCCG 58.645 39.130 0.00 0.00 0.00 4.79
3614 11547 3.181575 GCATTTTGTTACTTGTTGTCCGC 59.818 43.478 0.00 0.00 0.00 5.54
3615 11548 4.355437 CATTTTGTTACTTGTTGTCCGCA 58.645 39.130 0.00 0.00 0.00 5.69
3616 11549 4.436242 TTTTGTTACTTGTTGTCCGCAA 57.564 36.364 0.00 0.00 0.00 4.85
3617 11550 4.436242 TTTGTTACTTGTTGTCCGCAAA 57.564 36.364 0.00 0.00 36.22 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.887933 GGTCGACACCTACCCGTTTA 59.112 55.000 18.91 0.00 40.00 2.01
27 28 0.107643 TGCACCAATTGAGGTCGACA 59.892 50.000 18.91 0.00 40.77 4.35
208 2064 5.238650 TCACACAGCTTTAAAGTAGGCTTTC 59.761 40.000 16.38 0.00 43.28 2.62
245 2101 3.888930 TCACCTCCATGGAAAACTCAAAC 59.111 43.478 17.00 0.00 39.71 2.93
248 2104 2.711009 ACTCACCTCCATGGAAAACTCA 59.289 45.455 17.00 0.00 39.71 3.41
281 2137 9.912634 ACAACAATACATCCATCAAGTTTAAAG 57.087 29.630 0.00 0.00 0.00 1.85
292 2148 6.818644 GTCTGTCACTACAACAATACATCCAT 59.181 38.462 0.00 0.00 34.49 3.41
301 2157 5.105513 TCAGTCAAGTCTGTCACTACAACAA 60.106 40.000 0.00 0.00 34.49 2.83
321 2179 7.801716 TCTACACTTTAAAGCAACATTCAGT 57.198 32.000 15.24 3.40 0.00 3.41
469 2328 7.438160 CGATGTTGAGTATTTCTTGTAGGCATA 59.562 37.037 0.00 0.00 0.00 3.14
515 2381 1.892209 AGGGAAACTACGCAGGTTTG 58.108 50.000 5.87 0.00 37.07 2.93
516 2382 2.621526 CAAAGGGAAACTACGCAGGTTT 59.378 45.455 0.00 0.00 39.25 3.27
518 2384 1.142262 ACAAAGGGAAACTACGCAGGT 59.858 47.619 0.00 0.00 0.00 4.00
534 2400 1.804151 CCGCAGCTAAGCTAACACAAA 59.196 47.619 0.00 0.00 36.40 2.83
556 2422 6.456501 GTCCAAGTTATTAGTATCGCAGGAT 58.543 40.000 0.00 0.00 36.65 3.24
559 2425 4.989168 GGGTCCAAGTTATTAGTATCGCAG 59.011 45.833 0.00 0.00 0.00 5.18
563 2429 6.428159 CAGCATGGGTCCAAGTTATTAGTATC 59.572 42.308 0.00 0.00 0.00 2.24
565 2431 5.680619 CAGCATGGGTCCAAGTTATTAGTA 58.319 41.667 0.00 0.00 0.00 1.82
700 2616 8.800332 AGAAGCAAAATGAGTGAATCTACAATT 58.200 29.630 0.00 0.00 0.00 2.32
702 2618 7.750229 AGAAGCAAAATGAGTGAATCTACAA 57.250 32.000 0.00 0.00 0.00 2.41
704 2620 9.713740 CATAAGAAGCAAAATGAGTGAATCTAC 57.286 33.333 0.00 0.00 0.00 2.59
715 2631 7.383102 ACTGGAGTACATAAGAAGCAAAATG 57.617 36.000 0.00 0.00 0.00 2.32
726 2642 9.391006 GATTCCAATACAAACTGGAGTACATAA 57.609 33.333 0.00 0.00 42.61 1.90
771 2765 8.585881 GCAATATATGTACTCCCTCTGTTTCTA 58.414 37.037 0.00 0.00 0.00 2.10
777 2771 6.393990 GTCTGCAATATATGTACTCCCTCTG 58.606 44.000 0.00 0.00 0.00 3.35
782 2776 7.698550 CACTATCGTCTGCAATATATGTACTCC 59.301 40.741 0.00 0.00 0.00 3.85
791 2785 5.728637 TCCATCACTATCGTCTGCAATAT 57.271 39.130 0.00 0.00 0.00 1.28
795 2789 2.036346 CCATCCATCACTATCGTCTGCA 59.964 50.000 0.00 0.00 0.00 4.41
801 2795 2.232452 GGTCCTCCATCCATCACTATCG 59.768 54.545 0.00 0.00 0.00 2.92
838 3003 3.251972 TCACGCTGATAGCTCTAGTCATG 59.748 47.826 0.00 0.00 39.60 3.07
839 3004 3.481453 TCACGCTGATAGCTCTAGTCAT 58.519 45.455 0.00 0.00 39.60 3.06
840 3005 2.919228 TCACGCTGATAGCTCTAGTCA 58.081 47.619 0.00 0.00 39.60 3.41
842 3007 3.634448 ACAATCACGCTGATAGCTCTAGT 59.366 43.478 0.00 0.00 39.60 2.57
900 4322 2.027073 TCGATCGGCAGCAACACAC 61.027 57.895 16.41 0.00 0.00 3.82
949 5714 2.359602 CAGTGAGTGGCTGCCCTG 60.360 66.667 17.53 11.71 0.00 4.45
959 5724 3.094484 AGCTAGCTACCTTCAGTGAGT 57.906 47.619 17.69 0.00 0.00 3.41
995 5760 0.982852 CACCCAGTCCTCCATGCCTA 60.983 60.000 0.00 0.00 0.00 3.93
996 5761 2.125912 ACCCAGTCCTCCATGCCT 59.874 61.111 0.00 0.00 0.00 4.75
997 5762 1.271840 TACACCCAGTCCTCCATGCC 61.272 60.000 0.00 0.00 0.00 4.40
998 5763 0.107654 GTACACCCAGTCCTCCATGC 60.108 60.000 0.00 0.00 0.00 4.06
1022 5787 0.615331 GCACAAGGTGATGGAGAGGA 59.385 55.000 0.00 0.00 35.23 3.71
1146 5914 2.260869 GCTTGTCCAGGCGAGCAAA 61.261 57.895 14.93 0.00 43.54 3.68
1191 5959 2.885676 GCCATACCATGAGCGTGCG 61.886 63.158 0.00 0.00 0.00 5.34
1215 5983 0.456628 GGAGGAGGTAGAGCGTGAAC 59.543 60.000 0.00 0.00 0.00 3.18
1437 6205 3.142162 TACCGCGGGATGCTCGAA 61.142 61.111 31.76 0.00 43.27 3.71
2105 6884 7.168469 CCGGACCTGTAAAAGTTTATGTTTTTG 59.832 37.037 0.00 0.00 0.00 2.44
2681 7476 3.314357 TCAAGCAAGCTAGCAGCATATTG 59.686 43.478 27.06 22.29 45.56 1.90
2682 7477 3.548770 TCAAGCAAGCTAGCAGCATATT 58.451 40.909 27.06 14.37 45.56 1.28
2683 7478 3.204306 TCAAGCAAGCTAGCAGCATAT 57.796 42.857 27.06 14.22 45.56 1.78
2684 7479 2.696989 TCAAGCAAGCTAGCAGCATA 57.303 45.000 27.06 13.42 45.56 3.14
2685 7480 1.948145 GATCAAGCAAGCTAGCAGCAT 59.052 47.619 27.06 16.87 45.56 3.79
2812 9039 6.917533 ACATAAAGATTTCTTGCACCTTGAG 58.082 36.000 0.00 0.00 36.12 3.02
2836 9063 2.452600 AAGTTCAAGGTGCAAGGGAA 57.547 45.000 0.00 0.00 0.00 3.97
2852 9079 2.158559 TCCAACGCACATGCATAAAGT 58.841 42.857 0.00 0.00 42.21 2.66
2888 10486 1.886886 TGTTCACCTTCCCGTTAAGC 58.113 50.000 0.00 0.00 0.00 3.09
2894 10492 1.890876 TGTTCATGTTCACCTTCCCG 58.109 50.000 0.00 0.00 0.00 5.14
2977 10910 6.594159 AGATTAACGCAAACAGCTAGTAATGT 59.406 34.615 0.00 0.00 42.61 2.71
2978 10911 7.005062 AGATTAACGCAAACAGCTAGTAATG 57.995 36.000 0.00 0.00 42.61 1.90
2979 10912 8.888579 ATAGATTAACGCAAACAGCTAGTAAT 57.111 30.769 0.00 0.00 42.61 1.89
2980 10913 9.976511 ATATAGATTAACGCAAACAGCTAGTAA 57.023 29.630 0.00 0.00 42.61 2.24
2987 10920 9.909644 AGGTAGTATATAGATTAACGCAAACAG 57.090 33.333 0.00 0.00 0.00 3.16
2994 10927 9.160496 AGAACGGAGGTAGTATATAGATTAACG 57.840 37.037 0.00 0.00 0.00 3.18
3005 10938 6.803366 AATAAACCAGAACGGAGGTAGTAT 57.197 37.500 0.00 0.00 37.07 2.12
3018 10951 3.073356 ACGAAGGGGACAAATAAACCAGA 59.927 43.478 0.00 0.00 0.00 3.86
3020 10953 3.512219 ACGAAGGGGACAAATAAACCA 57.488 42.857 0.00 0.00 0.00 3.67
3115 11048 9.758470 CTTCGTATTTTGTGTCAAATTTTAACG 57.242 29.630 0.00 0.00 0.00 3.18
3138 11071 5.105756 CCATCCTGGTTTATTGGTTCACTTC 60.106 44.000 0.00 0.00 31.35 3.01
3178 11111 9.686683 GGAATTAGTGGGTTGCATCTTATATAT 57.313 33.333 0.00 0.00 0.00 0.86
3179 11112 8.890472 AGGAATTAGTGGGTTGCATCTTATATA 58.110 33.333 0.00 0.00 0.00 0.86
3180 11113 7.759607 AGGAATTAGTGGGTTGCATCTTATAT 58.240 34.615 0.00 0.00 0.00 0.86
3181 11114 7.149202 AGGAATTAGTGGGTTGCATCTTATA 57.851 36.000 0.00 0.00 0.00 0.98
3182 11115 6.018433 AGGAATTAGTGGGTTGCATCTTAT 57.982 37.500 0.00 0.00 0.00 1.73
3183 11116 5.450818 AGGAATTAGTGGGTTGCATCTTA 57.549 39.130 0.00 0.00 0.00 2.10
3184 11117 4.322057 AGGAATTAGTGGGTTGCATCTT 57.678 40.909 0.00 0.00 0.00 2.40
3185 11118 5.653255 ATAGGAATTAGTGGGTTGCATCT 57.347 39.130 0.00 0.00 0.00 2.90
3186 11119 6.096846 ACAAATAGGAATTAGTGGGTTGCATC 59.903 38.462 0.00 0.00 0.00 3.91
3187 11120 5.957774 ACAAATAGGAATTAGTGGGTTGCAT 59.042 36.000 0.00 0.00 0.00 3.96
3188 11121 5.329399 ACAAATAGGAATTAGTGGGTTGCA 58.671 37.500 0.00 0.00 0.00 4.08
3189 11122 5.652452 AGACAAATAGGAATTAGTGGGTTGC 59.348 40.000 0.00 0.00 0.00 4.17
3190 11123 7.703058 AAGACAAATAGGAATTAGTGGGTTG 57.297 36.000 0.00 0.00 0.00 3.77
3191 11124 8.832735 TCTAAGACAAATAGGAATTAGTGGGTT 58.167 33.333 0.00 0.00 0.00 4.11
3192 11125 8.388656 TCTAAGACAAATAGGAATTAGTGGGT 57.611 34.615 0.00 0.00 0.00 4.51
3193 11126 9.277783 CATCTAAGACAAATAGGAATTAGTGGG 57.722 37.037 0.00 0.00 0.00 4.61
3202 11135 9.973661 TCCAATTTTCATCTAAGACAAATAGGA 57.026 29.630 0.00 0.00 0.00 2.94
3208 11141 9.465199 TGATCATCCAATTTTCATCTAAGACAA 57.535 29.630 0.00 0.00 0.00 3.18
3209 11142 9.465199 TTGATCATCCAATTTTCATCTAAGACA 57.535 29.630 0.00 0.00 0.00 3.41
3210 11143 9.727627 GTTGATCATCCAATTTTCATCTAAGAC 57.272 33.333 0.00 0.00 0.00 3.01
3211 11144 9.690913 AGTTGATCATCCAATTTTCATCTAAGA 57.309 29.630 0.00 0.00 0.00 2.10
3214 11147 9.465199 TCAAGTTGATCATCCAATTTTCATCTA 57.535 29.630 0.08 0.00 0.00 1.98
3215 11148 8.248945 GTCAAGTTGATCATCCAATTTTCATCT 58.751 33.333 9.18 0.00 0.00 2.90
3216 11149 8.248945 AGTCAAGTTGATCATCCAATTTTCATC 58.751 33.333 9.18 0.00 0.00 2.92
3217 11150 8.033038 CAGTCAAGTTGATCATCCAATTTTCAT 58.967 33.333 9.18 0.00 0.00 2.57
3218 11151 7.372714 CAGTCAAGTTGATCATCCAATTTTCA 58.627 34.615 9.18 0.00 0.00 2.69
3219 11152 6.309737 GCAGTCAAGTTGATCATCCAATTTTC 59.690 38.462 9.18 0.00 0.00 2.29
3220 11153 6.014840 AGCAGTCAAGTTGATCATCCAATTTT 60.015 34.615 9.18 0.00 0.00 1.82
3221 11154 5.479375 AGCAGTCAAGTTGATCATCCAATTT 59.521 36.000 9.18 0.00 0.00 1.82
3222 11155 5.014858 AGCAGTCAAGTTGATCATCCAATT 58.985 37.500 9.18 0.00 0.00 2.32
3223 11156 4.597004 AGCAGTCAAGTTGATCATCCAAT 58.403 39.130 9.18 0.00 0.00 3.16
3224 11157 4.005650 GAGCAGTCAAGTTGATCATCCAA 58.994 43.478 9.18 0.00 31.56 3.53
3225 11158 3.262660 AGAGCAGTCAAGTTGATCATCCA 59.737 43.478 9.18 0.00 33.57 3.41
3226 11159 3.871485 AGAGCAGTCAAGTTGATCATCC 58.129 45.455 9.18 0.00 33.57 3.51
3227 11160 4.507388 GCTAGAGCAGTCAAGTTGATCATC 59.493 45.833 9.18 5.66 41.59 2.92
3228 11161 4.161942 AGCTAGAGCAGTCAAGTTGATCAT 59.838 41.667 9.18 0.00 45.16 2.45
3229 11162 3.513119 AGCTAGAGCAGTCAAGTTGATCA 59.487 43.478 9.18 0.00 45.16 2.92
3230 11163 3.864583 CAGCTAGAGCAGTCAAGTTGATC 59.135 47.826 9.18 2.40 45.16 2.92
3231 11164 3.859443 CAGCTAGAGCAGTCAAGTTGAT 58.141 45.455 9.18 0.00 45.16 2.57
3232 11165 2.611473 GCAGCTAGAGCAGTCAAGTTGA 60.611 50.000 0.08 0.08 45.16 3.18
3233 11166 1.731160 GCAGCTAGAGCAGTCAAGTTG 59.269 52.381 4.01 0.00 45.16 3.16
3234 11167 1.622811 AGCAGCTAGAGCAGTCAAGTT 59.377 47.619 4.01 0.00 45.16 2.66
3235 11168 1.265236 AGCAGCTAGAGCAGTCAAGT 58.735 50.000 4.01 0.00 45.16 3.16
3236 11169 2.165234 TGTAGCAGCTAGAGCAGTCAAG 59.835 50.000 1.02 0.00 45.16 3.02
3237 11170 2.171003 TGTAGCAGCTAGAGCAGTCAA 58.829 47.619 1.02 0.00 45.16 3.18
3238 11171 1.839424 TGTAGCAGCTAGAGCAGTCA 58.161 50.000 1.02 0.00 45.16 3.41
3239 11172 2.535331 GTTGTAGCAGCTAGAGCAGTC 58.465 52.381 1.02 0.00 45.16 3.51
3240 11173 1.205893 GGTTGTAGCAGCTAGAGCAGT 59.794 52.381 14.31 0.00 45.16 4.40
3241 11174 1.800655 CGGTTGTAGCAGCTAGAGCAG 60.801 57.143 14.31 7.36 45.16 4.24
3242 11175 0.173481 CGGTTGTAGCAGCTAGAGCA 59.827 55.000 14.31 1.82 45.16 4.26
3243 11176 0.456221 TCGGTTGTAGCAGCTAGAGC 59.544 55.000 1.02 3.31 42.49 4.09
3244 11177 2.164624 AGTTCGGTTGTAGCAGCTAGAG 59.835 50.000 1.02 0.00 0.00 2.43
3245 11178 2.168496 AGTTCGGTTGTAGCAGCTAGA 58.832 47.619 1.02 0.00 0.00 2.43
3246 11179 2.656560 AGTTCGGTTGTAGCAGCTAG 57.343 50.000 1.02 0.00 0.00 3.42
3247 11180 2.561419 AGAAGTTCGGTTGTAGCAGCTA 59.439 45.455 0.00 0.00 0.00 3.32
3248 11181 1.344763 AGAAGTTCGGTTGTAGCAGCT 59.655 47.619 0.00 0.00 0.00 4.24
3249 11182 1.727335 GAGAAGTTCGGTTGTAGCAGC 59.273 52.381 0.00 0.00 0.00 5.25
3250 11183 3.026630 TGAGAAGTTCGGTTGTAGCAG 57.973 47.619 0.00 0.00 0.00 4.24
3251 11184 3.678056 ATGAGAAGTTCGGTTGTAGCA 57.322 42.857 0.00 0.00 0.00 3.49
3252 11185 4.995124 TCTATGAGAAGTTCGGTTGTAGC 58.005 43.478 0.00 0.00 0.00 3.58
3253 11186 7.222999 GGAATTCTATGAGAAGTTCGGTTGTAG 59.777 40.741 5.23 0.00 37.69 2.74
3254 11187 7.039882 GGAATTCTATGAGAAGTTCGGTTGTA 58.960 38.462 5.23 0.00 37.69 2.41
3255 11188 5.875359 GGAATTCTATGAGAAGTTCGGTTGT 59.125 40.000 5.23 0.00 37.69 3.32
3256 11189 5.294552 GGGAATTCTATGAGAAGTTCGGTTG 59.705 44.000 5.23 0.00 37.69 3.77
3257 11190 5.429130 GGGAATTCTATGAGAAGTTCGGTT 58.571 41.667 5.23 0.00 37.69 4.44
3258 11191 4.441634 CGGGAATTCTATGAGAAGTTCGGT 60.442 45.833 5.23 0.00 37.69 4.69
3259 11192 4.051922 CGGGAATTCTATGAGAAGTTCGG 58.948 47.826 5.23 0.00 37.69 4.30
3260 11193 3.491267 GCGGGAATTCTATGAGAAGTTCG 59.509 47.826 5.23 8.13 37.69 3.95
3261 11194 4.509600 CAGCGGGAATTCTATGAGAAGTTC 59.490 45.833 5.23 0.00 37.69 3.01
3262 11195 4.162320 TCAGCGGGAATTCTATGAGAAGTT 59.838 41.667 5.23 0.00 37.69 2.66
3263 11196 3.706594 TCAGCGGGAATTCTATGAGAAGT 59.293 43.478 5.23 0.00 37.69 3.01
3264 11197 4.327982 TCAGCGGGAATTCTATGAGAAG 57.672 45.455 5.23 0.00 37.69 2.85
3265 11198 4.503817 CCATCAGCGGGAATTCTATGAGAA 60.504 45.833 5.23 0.00 38.78 2.87
3266 11199 3.007290 CCATCAGCGGGAATTCTATGAGA 59.993 47.826 5.23 0.00 0.00 3.27
3267 11200 3.332919 CCATCAGCGGGAATTCTATGAG 58.667 50.000 5.23 0.00 0.00 2.90
3268 11201 2.550855 GCCATCAGCGGGAATTCTATGA 60.551 50.000 5.23 5.33 0.00 2.15
3269 11202 1.808945 GCCATCAGCGGGAATTCTATG 59.191 52.381 5.23 0.00 0.00 2.23
3270 11203 1.271597 GGCCATCAGCGGGAATTCTAT 60.272 52.381 5.23 0.00 45.17 1.98
3271 11204 0.108585 GGCCATCAGCGGGAATTCTA 59.891 55.000 5.23 0.00 45.17 2.10
3272 11205 1.152881 GGCCATCAGCGGGAATTCT 60.153 57.895 5.23 0.00 45.17 2.40
3273 11206 2.196245 GGGCCATCAGCGGGAATTC 61.196 63.158 4.39 0.00 45.17 2.17
3274 11207 1.352622 TAGGGCCATCAGCGGGAATT 61.353 55.000 6.18 0.00 45.17 2.17
3275 11208 1.136329 ATAGGGCCATCAGCGGGAAT 61.136 55.000 6.18 0.00 45.17 3.01
3276 11209 1.770110 ATAGGGCCATCAGCGGGAA 60.770 57.895 6.18 0.00 45.17 3.97
3277 11210 2.122413 ATAGGGCCATCAGCGGGA 60.122 61.111 6.18 0.00 45.17 5.14
3278 11211 2.033141 CATAGGGCCATCAGCGGG 59.967 66.667 6.18 0.00 45.17 6.13
3279 11212 2.670934 GCATAGGGCCATCAGCGG 60.671 66.667 6.18 0.00 45.17 5.52
3303 11236 1.678598 TATAACACCCCCGACGGCTG 61.679 60.000 8.86 5.64 0.00 4.85
3304 11237 0.761702 ATATAACACCCCCGACGGCT 60.762 55.000 8.86 0.00 0.00 5.52
3305 11238 0.320160 GATATAACACCCCCGACGGC 60.320 60.000 8.86 0.00 0.00 5.68
3306 11239 0.319405 GGATATAACACCCCCGACGG 59.681 60.000 6.99 6.99 0.00 4.79
3307 11240 0.319405 GGGATATAACACCCCCGACG 59.681 60.000 0.00 0.00 40.19 5.12
3311 11244 1.142936 AACCGGGATATAACACCCCC 58.857 55.000 6.32 0.00 42.86 5.40
3312 11245 1.491754 ACAACCGGGATATAACACCCC 59.508 52.381 6.32 0.00 42.86 4.95
3313 11246 2.171027 TCACAACCGGGATATAACACCC 59.829 50.000 6.32 0.00 42.43 4.61
3314 11247 3.133362 TCTCACAACCGGGATATAACACC 59.867 47.826 6.32 0.00 0.00 4.16
3315 11248 4.395959 TCTCACAACCGGGATATAACAC 57.604 45.455 6.32 0.00 0.00 3.32
3316 11249 4.202315 CCATCTCACAACCGGGATATAACA 60.202 45.833 6.32 0.00 0.00 2.41
3317 11250 4.315803 CCATCTCACAACCGGGATATAAC 58.684 47.826 6.32 0.00 0.00 1.89
3318 11251 3.326588 CCCATCTCACAACCGGGATATAA 59.673 47.826 6.32 0.00 39.44 0.98
3319 11252 2.903784 CCCATCTCACAACCGGGATATA 59.096 50.000 6.32 0.00 39.44 0.86
3320 11253 1.699634 CCCATCTCACAACCGGGATAT 59.300 52.381 6.32 0.00 39.44 1.63
3321 11254 1.128200 CCCATCTCACAACCGGGATA 58.872 55.000 6.32 0.00 39.44 2.59
3322 11255 0.914417 ACCCATCTCACAACCGGGAT 60.914 55.000 6.32 0.00 39.44 3.85
3323 11256 1.131303 AACCCATCTCACAACCGGGA 61.131 55.000 6.32 0.00 39.44 5.14
3324 11257 0.676782 GAACCCATCTCACAACCGGG 60.677 60.000 6.32 0.00 43.02 5.73
3325 11258 1.019278 CGAACCCATCTCACAACCGG 61.019 60.000 0.00 0.00 0.00 5.28
3326 11259 0.320421 ACGAACCCATCTCACAACCG 60.320 55.000 0.00 0.00 0.00 4.44
3327 11260 1.804748 GAACGAACCCATCTCACAACC 59.195 52.381 0.00 0.00 0.00 3.77
3328 11261 2.223377 GTGAACGAACCCATCTCACAAC 59.777 50.000 0.00 0.00 34.79 3.32
3329 11262 2.158885 TGTGAACGAACCCATCTCACAA 60.159 45.455 0.92 0.00 39.15 3.33
3330 11263 1.414550 TGTGAACGAACCCATCTCACA 59.585 47.619 0.00 0.00 39.55 3.58
3331 11264 2.069273 CTGTGAACGAACCCATCTCAC 58.931 52.381 0.00 0.00 35.08 3.51
3332 11265 1.608025 GCTGTGAACGAACCCATCTCA 60.608 52.381 0.00 0.00 0.00 3.27
3333 11266 1.079503 GCTGTGAACGAACCCATCTC 58.920 55.000 0.00 0.00 0.00 2.75
3334 11267 0.321653 GGCTGTGAACGAACCCATCT 60.322 55.000 0.00 0.00 0.00 2.90
3335 11268 0.321653 AGGCTGTGAACGAACCCATC 60.322 55.000 0.00 0.00 0.00 3.51
3336 11269 0.606401 CAGGCTGTGAACGAACCCAT 60.606 55.000 6.28 0.00 0.00 4.00
3337 11270 1.227823 CAGGCTGTGAACGAACCCA 60.228 57.895 6.28 0.00 0.00 4.51
3338 11271 0.951040 CTCAGGCTGTGAACGAACCC 60.951 60.000 15.27 0.00 33.60 4.11
3339 11272 0.249911 ACTCAGGCTGTGAACGAACC 60.250 55.000 22.25 0.00 33.60 3.62
3340 11273 1.140816 GACTCAGGCTGTGAACGAAC 58.859 55.000 22.25 3.95 33.60 3.95
3341 11274 0.318699 CGACTCAGGCTGTGAACGAA 60.319 55.000 22.25 0.00 37.27 3.85
3342 11275 1.285950 CGACTCAGGCTGTGAACGA 59.714 57.895 22.25 0.00 37.27 3.85
3343 11276 1.007271 ACGACTCAGGCTGTGAACG 60.007 57.895 22.25 24.03 39.45 3.95
3344 11277 1.560860 GCACGACTCAGGCTGTGAAC 61.561 60.000 22.25 13.91 33.60 3.18
3345 11278 1.300931 GCACGACTCAGGCTGTGAA 60.301 57.895 22.25 0.00 33.60 3.18
3346 11279 1.820010 ATGCACGACTCAGGCTGTGA 61.820 55.000 22.25 0.00 34.29 3.58
3347 11280 1.375140 ATGCACGACTCAGGCTGTG 60.375 57.895 15.27 14.92 35.48 3.66
3348 11281 1.375140 CATGCACGACTCAGGCTGT 60.375 57.895 15.27 0.00 0.00 4.40
3349 11282 2.747822 GCATGCACGACTCAGGCTG 61.748 63.158 14.21 8.58 38.12 4.85
3350 11283 2.435586 GCATGCACGACTCAGGCT 60.436 61.111 14.21 0.00 38.12 4.58
3351 11284 2.110967 ATGCATGCACGACTCAGGC 61.111 57.895 25.37 0.00 41.11 4.85
3352 11285 1.022982 ACATGCATGCACGACTCAGG 61.023 55.000 25.37 1.71 0.00 3.86
3353 11286 0.096454 CACATGCATGCACGACTCAG 59.904 55.000 25.37 9.38 0.00 3.35
3354 11287 0.320596 TCACATGCATGCACGACTCA 60.321 50.000 25.37 1.84 0.00 3.41
3355 11288 0.372679 CTCACATGCATGCACGACTC 59.627 55.000 25.37 0.00 0.00 3.36
3356 11289 1.642037 GCTCACATGCATGCACGACT 61.642 55.000 25.37 3.57 0.00 4.18
3357 11290 1.226211 GCTCACATGCATGCACGAC 60.226 57.895 25.37 8.93 0.00 4.34
3358 11291 1.376295 AGCTCACATGCATGCACGA 60.376 52.632 25.37 18.32 34.99 4.35
3359 11292 1.226295 CAGCTCACATGCATGCACG 60.226 57.895 25.37 19.13 34.99 5.34
3360 11293 0.524414 TTCAGCTCACATGCATGCAC 59.476 50.000 25.37 9.27 34.99 4.57
3361 11294 1.134175 CATTCAGCTCACATGCATGCA 59.866 47.619 26.53 25.04 34.99 3.96
3362 11295 1.404035 TCATTCAGCTCACATGCATGC 59.596 47.619 26.53 11.82 34.99 4.06
3363 11296 2.541794 GCTCATTCAGCTCACATGCATG 60.542 50.000 25.09 25.09 45.83 4.06
3364 11297 1.676529 GCTCATTCAGCTCACATGCAT 59.323 47.619 0.00 0.00 45.83 3.96
3365 11298 1.092348 GCTCATTCAGCTCACATGCA 58.908 50.000 0.00 0.00 45.83 3.96
3366 11299 3.920144 GCTCATTCAGCTCACATGC 57.080 52.632 0.00 0.00 45.83 4.06
3375 11308 1.250328 TGCCAGGTTTGCTCATTCAG 58.750 50.000 0.00 0.00 0.00 3.02
3376 11309 1.927487 ATGCCAGGTTTGCTCATTCA 58.073 45.000 0.00 0.00 0.00 2.57
3377 11310 3.382546 ACATATGCCAGGTTTGCTCATTC 59.617 43.478 1.58 0.00 0.00 2.67
3378 11311 3.131577 CACATATGCCAGGTTTGCTCATT 59.868 43.478 1.58 0.00 0.00 2.57
3379 11312 2.691526 CACATATGCCAGGTTTGCTCAT 59.308 45.455 1.58 0.00 0.00 2.90
3380 11313 2.093890 CACATATGCCAGGTTTGCTCA 58.906 47.619 1.58 0.00 0.00 4.26
3381 11314 2.368439 TCACATATGCCAGGTTTGCTC 58.632 47.619 1.58 0.00 0.00 4.26
3382 11315 2.512692 TCACATATGCCAGGTTTGCT 57.487 45.000 1.58 0.00 0.00 3.91
3383 11316 2.159198 CCTTCACATATGCCAGGTTTGC 60.159 50.000 1.58 0.00 0.00 3.68
3384 11317 2.159198 GCCTTCACATATGCCAGGTTTG 60.159 50.000 14.09 0.38 31.50 2.93
3385 11318 2.102578 GCCTTCACATATGCCAGGTTT 58.897 47.619 14.09 0.00 31.50 3.27
3386 11319 1.285962 AGCCTTCACATATGCCAGGTT 59.714 47.619 14.09 7.74 31.50 3.50
3387 11320 0.921896 AGCCTTCACATATGCCAGGT 59.078 50.000 14.09 0.00 31.50 4.00
3388 11321 2.062971 AAGCCTTCACATATGCCAGG 57.937 50.000 1.58 6.83 0.00 4.45
3389 11322 5.106396 GCTAATAAGCCTTCACATATGCCAG 60.106 44.000 1.58 0.00 43.40 4.85
3390 11323 4.761739 GCTAATAAGCCTTCACATATGCCA 59.238 41.667 1.58 0.00 43.40 4.92
3391 11324 5.302357 GCTAATAAGCCTTCACATATGCC 57.698 43.478 1.58 0.00 43.40 4.40
3404 11337 5.407995 TGCAACACCAATTTTGCTAATAAGC 59.592 36.000 12.47 0.00 46.83 3.09
3405 11338 7.118101 ACATGCAACACCAATTTTGCTAATAAG 59.882 33.333 12.47 1.69 46.83 1.73
3406 11339 6.933521 ACATGCAACACCAATTTTGCTAATAA 59.066 30.769 12.47 0.00 46.83 1.40
3407 11340 6.368243 CACATGCAACACCAATTTTGCTAATA 59.632 34.615 12.47 0.00 46.83 0.98
3408 11341 5.179742 CACATGCAACACCAATTTTGCTAAT 59.820 36.000 12.47 0.00 46.83 1.73
3409 11342 4.510711 CACATGCAACACCAATTTTGCTAA 59.489 37.500 12.47 0.00 46.83 3.09
3410 11343 4.056740 CACATGCAACACCAATTTTGCTA 58.943 39.130 12.47 2.09 46.83 3.49
3411 11344 2.873472 CACATGCAACACCAATTTTGCT 59.127 40.909 12.47 0.00 46.83 3.91
3412 11345 2.602694 GCACATGCAACACCAATTTTGC 60.603 45.455 5.76 5.76 46.88 3.68
3413 11346 2.873472 AGCACATGCAACACCAATTTTG 59.127 40.909 6.64 0.00 45.16 2.44
3414 11347 3.196939 AGCACATGCAACACCAATTTT 57.803 38.095 6.64 0.00 45.16 1.82
3415 11348 2.873472 CAAGCACATGCAACACCAATTT 59.127 40.909 6.64 0.00 45.16 1.82
3416 11349 2.158928 ACAAGCACATGCAACACCAATT 60.159 40.909 6.64 0.00 45.16 2.32
3417 11350 1.413445 ACAAGCACATGCAACACCAAT 59.587 42.857 6.64 0.00 45.16 3.16
3418 11351 0.822811 ACAAGCACATGCAACACCAA 59.177 45.000 6.64 0.00 45.16 3.67
3419 11352 1.608109 CTACAAGCACATGCAACACCA 59.392 47.619 6.64 0.00 45.16 4.17
3420 11353 1.666888 GCTACAAGCACATGCAACACC 60.667 52.381 6.64 0.00 45.16 4.16
3421 11354 1.689959 GCTACAAGCACATGCAACAC 58.310 50.000 6.64 0.00 45.16 3.32
3432 11365 5.017294 AGGAGTTTATCTCTGCTACAAGC 57.983 43.478 0.00 0.00 42.40 4.01
3433 11366 6.547880 TCCTAGGAGTTTATCTCTGCTACAAG 59.452 42.308 7.62 0.00 42.40 3.16
3434 11367 6.432581 TCCTAGGAGTTTATCTCTGCTACAA 58.567 40.000 7.62 0.00 42.40 2.41
3435 11368 6.014771 TCCTAGGAGTTTATCTCTGCTACA 57.985 41.667 7.62 0.00 42.40 2.74
3436 11369 7.533289 AATCCTAGGAGTTTATCTCTGCTAC 57.467 40.000 18.34 0.00 42.40 3.58
3437 11370 8.554490 AAAATCCTAGGAGTTTATCTCTGCTA 57.446 34.615 30.57 0.00 40.04 3.49
3438 11371 7.444703 AAAATCCTAGGAGTTTATCTCTGCT 57.555 36.000 30.57 8.14 40.04 4.24
3439 11372 7.227711 GGAAAAATCCTAGGAGTTTATCTCTGC 59.772 40.741 31.45 19.54 40.79 4.26
3440 11373 8.490311 AGGAAAAATCCTAGGAGTTTATCTCTG 58.510 37.037 31.45 0.00 40.79 3.35
3441 11374 8.631275 AGGAAAAATCCTAGGAGTTTATCTCT 57.369 34.615 31.45 22.70 40.79 3.10
3442 11375 8.710239 AGAGGAAAAATCCTAGGAGTTTATCTC 58.290 37.037 32.75 32.75 40.79 2.75
3443 11376 8.631275 AGAGGAAAAATCCTAGGAGTTTATCT 57.369 34.615 31.45 28.15 40.79 1.98
3444 11377 8.487028 TGAGAGGAAAAATCCTAGGAGTTTATC 58.513 37.037 31.45 26.84 40.79 1.75
3445 11378 8.393959 TGAGAGGAAAAATCCTAGGAGTTTAT 57.606 34.615 31.45 21.94 40.79 1.40
3446 11379 7.808279 TGAGAGGAAAAATCCTAGGAGTTTA 57.192 36.000 31.45 15.40 40.79 2.01
3447 11380 6.704056 TGAGAGGAAAAATCCTAGGAGTTT 57.296 37.500 27.33 27.33 42.99 2.66
3448 11381 6.899892 ATGAGAGGAAAAATCCTAGGAGTT 57.100 37.500 18.62 18.62 40.86 3.01
3449 11382 6.407525 CGAATGAGAGGAAAAATCCTAGGAGT 60.408 42.308 18.34 12.51 40.86 3.85
3450 11383 5.988561 CGAATGAGAGGAAAAATCCTAGGAG 59.011 44.000 18.34 0.00 40.86 3.69
3451 11384 5.685075 GCGAATGAGAGGAAAAATCCTAGGA 60.685 44.000 15.46 15.46 40.86 2.94
3452 11385 4.513318 GCGAATGAGAGGAAAAATCCTAGG 59.487 45.833 0.82 0.82 40.86 3.02
3453 11386 4.513318 GGCGAATGAGAGGAAAAATCCTAG 59.487 45.833 0.00 0.00 40.86 3.02
3454 11387 4.080582 TGGCGAATGAGAGGAAAAATCCTA 60.081 41.667 0.00 0.00 40.86 2.94
3455 11388 3.282885 GGCGAATGAGAGGAAAAATCCT 58.717 45.455 0.00 0.00 44.06 3.24
3456 11389 3.016736 TGGCGAATGAGAGGAAAAATCC 58.983 45.455 0.00 0.00 0.00 3.01
3457 11390 4.096984 ACATGGCGAATGAGAGGAAAAATC 59.903 41.667 0.00 0.00 38.72 2.17
3458 11391 4.019174 ACATGGCGAATGAGAGGAAAAAT 58.981 39.130 0.00 0.00 38.72 1.82
3459 11392 3.420893 ACATGGCGAATGAGAGGAAAAA 58.579 40.909 0.00 0.00 38.72 1.94
3460 11393 3.071874 ACATGGCGAATGAGAGGAAAA 57.928 42.857 0.00 0.00 38.72 2.29
3461 11394 2.787473 ACATGGCGAATGAGAGGAAA 57.213 45.000 0.00 0.00 38.72 3.13
3462 11395 2.787473 AACATGGCGAATGAGAGGAA 57.213 45.000 0.00 0.00 38.72 3.36
3463 11396 2.787473 AAACATGGCGAATGAGAGGA 57.213 45.000 0.00 0.00 38.72 3.71
3464 11397 4.963276 TTTAAACATGGCGAATGAGAGG 57.037 40.909 0.00 0.00 38.72 3.69
3465 11398 5.698832 TGTTTTAAACATGGCGAATGAGAG 58.301 37.500 6.41 0.00 38.72 3.20
3466 11399 5.697473 TGTTTTAAACATGGCGAATGAGA 57.303 34.783 6.41 0.00 38.72 3.27
3477 11410 6.623443 CGCACACGGGGATGTTTTAAACAT 62.623 45.833 21.44 21.44 44.69 2.71
3478 11411 2.034812 GCACACGGGGATGTTTTAAACA 59.965 45.455 13.12 13.12 46.94 2.83
3479 11412 2.668250 GCACACGGGGATGTTTTAAAC 58.332 47.619 0.20 0.20 0.00 2.01
3480 11413 1.267261 CGCACACGGGGATGTTTTAAA 59.733 47.619 0.00 0.00 34.97 1.52
3481 11414 0.875728 CGCACACGGGGATGTTTTAA 59.124 50.000 0.00 0.00 34.97 1.52
3482 11415 1.579084 GCGCACACGGGGATGTTTTA 61.579 55.000 0.30 0.00 40.57 1.52
3483 11416 2.914908 GCGCACACGGGGATGTTTT 61.915 57.895 0.30 0.00 40.57 2.43
3484 11417 3.361977 GCGCACACGGGGATGTTT 61.362 61.111 0.30 0.00 40.57 2.83
3495 11428 4.710695 CTACCCGTCACGCGCACA 62.711 66.667 5.73 0.00 39.71 4.57
3496 11429 4.409218 TCTACCCGTCACGCGCAC 62.409 66.667 5.73 1.49 39.71 5.34
3497 11430 4.409218 GTCTACCCGTCACGCGCA 62.409 66.667 5.73 0.00 39.71 6.09
3499 11432 3.740397 TGGTCTACCCGTCACGCG 61.740 66.667 3.53 3.53 40.95 6.01
3500 11433 2.126189 GTGGTCTACCCGTCACGC 60.126 66.667 0.00 0.00 35.15 5.34
3501 11434 1.080974 GTGTGGTCTACCCGTCACG 60.081 63.158 0.00 0.00 33.32 4.35
3502 11435 1.291272 GGTGTGGTCTACCCGTCAC 59.709 63.158 0.00 4.10 38.86 3.67
3503 11436 3.781760 GGTGTGGTCTACCCGTCA 58.218 61.111 0.00 0.00 35.15 4.35
3508 11441 1.888736 GAGACGGGTGTGGTCTACC 59.111 63.158 0.00 0.00 44.41 3.18
3509 11442 1.505353 CGAGACGGGTGTGGTCTAC 59.495 63.158 0.00 0.00 44.41 2.59
3510 11443 1.676635 CCGAGACGGGTGTGGTCTA 60.677 63.158 2.00 0.00 44.41 2.59
3511 11444 2.989824 CCGAGACGGGTGTGGTCT 60.990 66.667 2.00 0.00 46.91 3.85
3521 11454 2.184579 GGAAGAAGGCCCGAGACG 59.815 66.667 0.00 0.00 0.00 4.18
3522 11455 2.585153 GGGAAGAAGGCCCGAGAC 59.415 66.667 0.00 0.00 35.50 3.36
3527 11460 0.106167 GTATTGGGGGAAGAAGGCCC 60.106 60.000 0.00 0.00 45.25 5.80
3528 11461 0.106167 GGTATTGGGGGAAGAAGGCC 60.106 60.000 0.00 0.00 0.00 5.19
3529 11462 0.106167 GGGTATTGGGGGAAGAAGGC 60.106 60.000 0.00 0.00 0.00 4.35
3530 11463 0.556258 GGGGTATTGGGGGAAGAAGG 59.444 60.000 0.00 0.00 0.00 3.46
3531 11464 0.182775 CGGGGTATTGGGGGAAGAAG 59.817 60.000 0.00 0.00 0.00 2.85
3532 11465 0.550638 ACGGGGTATTGGGGGAAGAA 60.551 55.000 0.00 0.00 0.00 2.52
3533 11466 0.550638 AACGGGGTATTGGGGGAAGA 60.551 55.000 0.00 0.00 0.00 2.87
3534 11467 0.106868 GAACGGGGTATTGGGGGAAG 60.107 60.000 0.00 0.00 0.00 3.46
3535 11468 1.912826 CGAACGGGGTATTGGGGGAA 61.913 60.000 0.00 0.00 0.00 3.97
3536 11469 2.368821 CGAACGGGGTATTGGGGGA 61.369 63.158 0.00 0.00 0.00 4.81
3537 11470 2.191109 CGAACGGGGTATTGGGGG 59.809 66.667 0.00 0.00 0.00 5.40
3538 11471 1.153309 GACGAACGGGGTATTGGGG 60.153 63.158 0.00 0.00 0.00 4.96
3539 11472 0.179092 GAGACGAACGGGGTATTGGG 60.179 60.000 0.00 0.00 0.00 4.12
3540 11473 0.822164 AGAGACGAACGGGGTATTGG 59.178 55.000 0.00 0.00 0.00 3.16
3541 11474 1.749634 AGAGAGACGAACGGGGTATTG 59.250 52.381 0.00 0.00 0.00 1.90
3542 11475 2.140839 AGAGAGACGAACGGGGTATT 57.859 50.000 0.00 0.00 0.00 1.89
3543 11476 2.022934 GAAGAGAGACGAACGGGGTAT 58.977 52.381 0.00 0.00 0.00 2.73
3544 11477 1.271543 TGAAGAGAGACGAACGGGGTA 60.272 52.381 0.00 0.00 0.00 3.69
3545 11478 0.538977 TGAAGAGAGACGAACGGGGT 60.539 55.000 0.00 0.00 0.00 4.95
3546 11479 0.171455 CTGAAGAGAGACGAACGGGG 59.829 60.000 0.00 0.00 0.00 5.73
3547 11480 0.456995 GCTGAAGAGAGACGAACGGG 60.457 60.000 0.00 0.00 0.00 5.28
3548 11481 0.794981 CGCTGAAGAGAGACGAACGG 60.795 60.000 0.00 0.00 0.00 4.44
3549 11482 0.110147 ACGCTGAAGAGAGACGAACG 60.110 55.000 0.00 0.00 0.00 3.95
3550 11483 1.198178 AGACGCTGAAGAGAGACGAAC 59.802 52.381 0.00 0.00 0.00 3.95
3551 11484 1.465387 GAGACGCTGAAGAGAGACGAA 59.535 52.381 0.00 0.00 0.00 3.85
3552 11485 1.080298 GAGACGCTGAAGAGAGACGA 58.920 55.000 0.00 0.00 0.00 4.20
3553 11486 0.247497 CGAGACGCTGAAGAGAGACG 60.247 60.000 0.00 0.00 0.00 4.18
3554 11487 1.080298 TCGAGACGCTGAAGAGAGAC 58.920 55.000 0.00 0.00 0.00 3.36
3555 11488 1.080298 GTCGAGACGCTGAAGAGAGA 58.920 55.000 0.00 0.00 0.00 3.10
3556 11489 0.799393 TGTCGAGACGCTGAAGAGAG 59.201 55.000 0.00 0.00 0.00 3.20
3557 11490 1.235724 TTGTCGAGACGCTGAAGAGA 58.764 50.000 0.00 0.00 0.00 3.10
3558 11491 2.051879 TTTGTCGAGACGCTGAAGAG 57.948 50.000 0.00 0.00 0.00 2.85
3559 11492 2.502213 TTTTGTCGAGACGCTGAAGA 57.498 45.000 0.00 0.00 0.00 2.87
3576 11509 5.474189 ACAAAATGCAGCAGCCAATATTTTT 59.526 32.000 0.00 0.00 41.13 1.94
3577 11510 5.005094 ACAAAATGCAGCAGCCAATATTTT 58.995 33.333 0.00 1.49 41.13 1.82
3578 11511 4.581868 ACAAAATGCAGCAGCCAATATTT 58.418 34.783 0.00 0.00 41.13 1.40
3579 11512 4.210724 ACAAAATGCAGCAGCCAATATT 57.789 36.364 0.00 0.00 41.13 1.28
3580 11513 3.899052 ACAAAATGCAGCAGCCAATAT 57.101 38.095 0.00 0.00 41.13 1.28
3581 11514 3.681593 AACAAAATGCAGCAGCCAATA 57.318 38.095 0.00 0.00 41.13 1.90
3582 11515 2.554370 AACAAAATGCAGCAGCCAAT 57.446 40.000 0.00 0.00 41.13 3.16
3583 11516 2.364970 AGTAACAAAATGCAGCAGCCAA 59.635 40.909 0.00 0.00 41.13 4.52
3584 11517 1.962807 AGTAACAAAATGCAGCAGCCA 59.037 42.857 0.00 0.00 41.13 4.75
3585 11518 2.730550 AGTAACAAAATGCAGCAGCC 57.269 45.000 0.00 0.00 41.13 4.85
3586 11519 3.383761 ACAAGTAACAAAATGCAGCAGC 58.616 40.909 0.00 0.00 42.57 5.25
3587 11520 4.805192 ACAACAAGTAACAAAATGCAGCAG 59.195 37.500 0.00 0.00 0.00 4.24
3588 11521 4.753233 ACAACAAGTAACAAAATGCAGCA 58.247 34.783 0.00 0.00 0.00 4.41
3589 11522 4.209080 GGACAACAAGTAACAAAATGCAGC 59.791 41.667 0.00 0.00 0.00 5.25
3590 11523 4.440758 CGGACAACAAGTAACAAAATGCAG 59.559 41.667 0.00 0.00 0.00 4.41
3591 11524 4.355437 CGGACAACAAGTAACAAAATGCA 58.645 39.130 0.00 0.00 0.00 3.96
3592 11525 3.181575 GCGGACAACAAGTAACAAAATGC 59.818 43.478 0.00 0.00 0.00 3.56
3593 11526 4.355437 TGCGGACAACAAGTAACAAAATG 58.645 39.130 0.00 0.00 0.00 2.32
3594 11527 4.640789 TGCGGACAACAAGTAACAAAAT 57.359 36.364 0.00 0.00 0.00 1.82
3595 11528 4.436242 TTGCGGACAACAAGTAACAAAA 57.564 36.364 0.00 0.00 0.00 2.44
3596 11529 4.436242 TTTGCGGACAACAAGTAACAAA 57.564 36.364 0.00 0.00 34.87 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.