Multiple sequence alignment - TraesCS6D01G382200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G382200 chr6D 100.000 2840 0 0 1 2840 462195922 462198761 0.000000e+00 5245.0
1 TraesCS6D01G382200 chr6D 80.066 1214 131 55 723 1881 462181430 462182587 0.000000e+00 798.0
2 TraesCS6D01G382200 chr6D 77.597 616 95 32 2246 2832 462183031 462183632 1.630000e-87 333.0
3 TraesCS6D01G382200 chr6D 77.606 259 32 15 1936 2181 462182768 462183013 1.780000e-27 134.0
4 TraesCS6D01G382200 chr6B 88.164 1149 67 22 768 1881 704448851 704449965 0.000000e+00 1304.0
5 TraesCS6D01G382200 chr6B 88.401 957 71 22 1911 2837 704450087 704451033 0.000000e+00 1116.0
6 TraesCS6D01G382200 chr6B 90.000 440 31 8 2408 2837 702926818 702927254 8.890000e-155 556.0
7 TraesCS6D01G382200 chr6B 89.487 409 28 5 1474 1882 704445179 704445572 1.170000e-138 503.0
8 TraesCS6D01G382200 chr6B 92.523 321 17 6 2516 2830 702901659 702901978 1.200000e-123 453.0
9 TraesCS6D01G382200 chr6B 96.098 205 8 0 2630 2834 702979716 702979920 4.530000e-88 335.0
10 TraesCS6D01G382200 chr6B 89.231 260 23 4 2006 2263 703047203 703047459 1.270000e-83 320.0
11 TraesCS6D01G382200 chr6B 82.656 369 48 11 1616 1980 703046853 703047209 2.120000e-81 313.0
12 TraesCS6D01G382200 chr6B 82.385 369 49 11 1616 1980 703096485 703096841 9.880000e-80 307.0
13 TraesCS6D01G382200 chr6B 88.372 258 25 4 2008 2263 703096837 703097091 3.550000e-79 305.0
14 TraesCS6D01G382200 chr6B 82.114 369 49 12 1616 1980 703143030 703143385 1.650000e-77 300.0
15 TraesCS6D01G382200 chr6B 88.017 242 24 4 2008 2247 703143381 703143619 5.990000e-72 281.0
16 TraesCS6D01G382200 chr6B 81.361 338 48 10 1616 1950 702998638 702998963 7.800000e-66 261.0
17 TraesCS6D01G382200 chr6B 89.844 128 8 3 1953 2076 704445723 704445849 2.930000e-35 159.0
18 TraesCS6D01G382200 chr6B 85.437 103 13 2 2530 2631 702979537 702979638 3.870000e-19 106.0
19 TraesCS6D01G382200 chr6B 96.000 50 2 0 542 591 704448687 704448736 6.520000e-12 82.4
20 TraesCS6D01G382200 chr6B 88.525 61 6 1 2351 2411 702926679 702926738 3.920000e-09 73.1
21 TraesCS6D01G382200 chr6A 86.964 1189 95 26 733 1882 609031049 609032216 0.000000e+00 1282.0
22 TraesCS6D01G382200 chr6A 88.017 918 73 13 1952 2837 609032217 609033129 0.000000e+00 1051.0
23 TraesCS6D01G382200 chr5A 88.889 90 8 2 128 217 670551038 670550951 2.990000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G382200 chr6D 462195922 462198761 2839 False 5245.000000 5245 100.0000 1 2840 1 chr6D.!!$F1 2839
1 TraesCS6D01G382200 chr6D 462181430 462183632 2202 False 421.666667 798 78.4230 723 2832 3 chr6D.!!$F2 2109
2 TraesCS6D01G382200 chr6B 704445179 704451033 5854 False 632.880000 1304 90.3792 542 2837 5 chr6B.!!$F8 2295
3 TraesCS6D01G382200 chr6B 703046853 703047459 606 False 316.500000 320 85.9435 1616 2263 2 chr6B.!!$F5 647
4 TraesCS6D01G382200 chr6B 702926679 702927254 575 False 314.550000 556 89.2625 2351 2837 2 chr6B.!!$F3 486
5 TraesCS6D01G382200 chr6B 703096485 703097091 606 False 306.000000 307 85.3785 1616 2263 2 chr6B.!!$F6 647
6 TraesCS6D01G382200 chr6B 703143030 703143619 589 False 290.500000 300 85.0655 1616 2247 2 chr6B.!!$F7 631
7 TraesCS6D01G382200 chr6A 609031049 609033129 2080 False 1166.500000 1282 87.4905 733 2837 2 chr6A.!!$F1 2104

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 226 0.034896 ACGCGGCCCTAATATTGAGG 59.965 55.0 12.47 0.0 0.0 3.86 F
367 368 0.108585 CACTGCACCTGGGTACTGTT 59.891 55.0 0.00 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1073 4075 0.384669 GTAGTAGTAGGGTGCCAGCG 59.615 60.0 0.00 0.0 0.0 5.18 R
2235 5466 1.043816 AGGATATCACAGTGGGCTCG 58.956 55.0 4.83 0.0 0.0 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.260380 CAGAATAGGATCTGTGGCCTAGG 59.740 52.174 3.67 3.67 41.54 3.02
23 24 1.650528 ATAGGATCTGTGGCCTAGGC 58.349 55.000 26.55 26.55 39.93 3.93
24 25 0.563173 TAGGATCTGTGGCCTAGGCT 59.437 55.000 32.18 12.48 41.60 4.58
25 26 0.327000 AGGATCTGTGGCCTAGGCTT 60.327 55.000 32.18 11.10 41.60 4.35
27 28 1.064389 GGATCTGTGGCCTAGGCTTTT 60.064 52.381 32.18 12.15 41.60 2.27
28 29 2.621668 GGATCTGTGGCCTAGGCTTTTT 60.622 50.000 32.18 13.20 41.60 1.94
29 30 3.371595 GGATCTGTGGCCTAGGCTTTTTA 60.372 47.826 32.18 16.18 41.60 1.52
30 31 3.350219 TCTGTGGCCTAGGCTTTTTAG 57.650 47.619 32.18 21.43 41.60 1.85
32 33 1.708551 TGTGGCCTAGGCTTTTTAGGT 59.291 47.619 32.18 0.00 39.91 3.08
33 34 2.290705 TGTGGCCTAGGCTTTTTAGGTC 60.291 50.000 32.18 13.36 42.11 3.85
35 36 3.199289 GTGGCCTAGGCTTTTTAGGTCTA 59.801 47.826 32.18 1.94 42.23 2.59
36 37 4.045022 TGGCCTAGGCTTTTTAGGTCTAT 58.955 43.478 32.18 0.00 42.23 1.98
37 38 4.477213 TGGCCTAGGCTTTTTAGGTCTATT 59.523 41.667 32.18 0.00 42.23 1.73
38 39 5.044402 TGGCCTAGGCTTTTTAGGTCTATTT 60.044 40.000 32.18 0.00 42.23 1.40
39 40 5.531659 GGCCTAGGCTTTTTAGGTCTATTTC 59.468 44.000 32.18 6.34 39.34 2.17
40 41 6.358178 GCCTAGGCTTTTTAGGTCTATTTCT 58.642 40.000 27.17 0.00 39.91 2.52
41 42 6.829298 GCCTAGGCTTTTTAGGTCTATTTCTT 59.171 38.462 27.17 0.00 39.91 2.52
43 44 8.047310 CCTAGGCTTTTTAGGTCTATTTCTTGA 58.953 37.037 0.00 0.00 34.27 3.02
44 45 9.620259 CTAGGCTTTTTAGGTCTATTTCTTGAT 57.380 33.333 0.00 0.00 0.00 2.57
46 47 8.109634 AGGCTTTTTAGGTCTATTTCTTGATGA 58.890 33.333 0.00 0.00 0.00 2.92
47 48 8.907885 GGCTTTTTAGGTCTATTTCTTGATGAT 58.092 33.333 0.00 0.00 0.00 2.45
55 56 9.995003 AGGTCTATTTCTTGATGATGTATTCTC 57.005 33.333 0.00 0.00 0.00 2.87
56 57 9.995003 GGTCTATTTCTTGATGATGTATTCTCT 57.005 33.333 0.00 0.00 0.00 3.10
101 102 6.096564 AGACTATATTTATACACCTAGGGCGC 59.903 42.308 14.81 0.00 0.00 6.53
102 103 5.956563 ACTATATTTATACACCTAGGGCGCT 59.043 40.000 14.81 8.86 0.00 5.92
103 104 3.679824 ATTTATACACCTAGGGCGCTC 57.320 47.619 14.81 1.48 0.00 5.03
105 106 0.892358 TATACACCTAGGGCGCTCCG 60.892 60.000 14.81 0.40 41.52 4.63
126 127 4.135153 CGCTCCCGGAGTGGACAG 62.135 72.222 18.91 0.02 42.00 3.51
127 128 2.680352 GCTCCCGGAGTGGACAGA 60.680 66.667 16.09 0.00 42.00 3.41
130 131 2.681778 CCCGGAGTGGACAGAGCT 60.682 66.667 0.73 0.00 42.00 4.09
131 132 2.575993 CCGGAGTGGACAGAGCTG 59.424 66.667 0.00 0.00 42.00 4.24
132 133 2.575993 CGGAGTGGACAGAGCTGG 59.424 66.667 0.00 0.00 34.19 4.85
133 134 1.979155 CGGAGTGGACAGAGCTGGA 60.979 63.158 0.00 0.00 34.19 3.86
134 135 1.896694 GGAGTGGACAGAGCTGGAG 59.103 63.158 0.00 0.00 34.19 3.86
135 136 0.902516 GGAGTGGACAGAGCTGGAGT 60.903 60.000 0.00 0.00 34.19 3.85
137 138 2.171840 GAGTGGACAGAGCTGGAGTTA 58.828 52.381 0.00 0.00 34.19 2.24
138 139 2.763448 GAGTGGACAGAGCTGGAGTTAT 59.237 50.000 0.00 0.00 34.19 1.89
139 140 3.954904 GAGTGGACAGAGCTGGAGTTATA 59.045 47.826 0.00 0.00 34.19 0.98
140 141 4.353777 AGTGGACAGAGCTGGAGTTATAA 58.646 43.478 0.00 0.00 34.19 0.98
141 142 4.965532 AGTGGACAGAGCTGGAGTTATAAT 59.034 41.667 0.00 0.00 34.19 1.28
142 143 5.069781 AGTGGACAGAGCTGGAGTTATAATC 59.930 44.000 0.00 0.00 34.19 1.75
144 145 4.262678 GGACAGAGCTGGAGTTATAATCCC 60.263 50.000 0.00 5.66 35.86 3.85
145 146 4.561752 ACAGAGCTGGAGTTATAATCCCT 58.438 43.478 0.00 3.51 35.86 4.20
146 147 4.346418 ACAGAGCTGGAGTTATAATCCCTG 59.654 45.833 0.00 10.91 35.86 4.45
147 148 4.590647 CAGAGCTGGAGTTATAATCCCTGA 59.409 45.833 0.00 0.00 35.86 3.86
149 150 5.306678 AGAGCTGGAGTTATAATCCCTGAAG 59.693 44.000 0.00 6.17 35.86 3.02
151 152 4.310769 CTGGAGTTATAATCCCTGAAGCG 58.689 47.826 9.90 0.00 35.86 4.68
152 153 3.964688 TGGAGTTATAATCCCTGAAGCGA 59.035 43.478 9.90 0.00 35.86 4.93
153 154 4.039245 TGGAGTTATAATCCCTGAAGCGAG 59.961 45.833 9.90 0.00 35.86 5.03
154 155 3.991121 GAGTTATAATCCCTGAAGCGAGC 59.009 47.826 0.00 0.00 0.00 5.03
155 156 3.643792 AGTTATAATCCCTGAAGCGAGCT 59.356 43.478 0.00 0.00 0.00 4.09
156 157 4.833380 AGTTATAATCCCTGAAGCGAGCTA 59.167 41.667 0.00 0.00 0.00 3.32
158 159 2.317530 AATCCCTGAAGCGAGCTAAC 57.682 50.000 0.00 0.00 0.00 2.34
159 160 0.103208 ATCCCTGAAGCGAGCTAACG 59.897 55.000 0.00 0.00 0.00 3.18
160 161 1.519455 CCCTGAAGCGAGCTAACGG 60.519 63.158 0.00 1.38 0.00 4.44
161 162 1.519455 CCTGAAGCGAGCTAACGGG 60.519 63.158 12.87 12.87 0.00 5.28
162 163 2.125673 TGAAGCGAGCTAACGGGC 60.126 61.111 0.00 0.00 0.00 6.13
163 164 2.184579 GAAGCGAGCTAACGGGCT 59.815 61.111 0.00 0.00 46.11 5.19
164 165 2.125512 AAGCGAGCTAACGGGCTG 60.126 61.111 0.00 0.00 43.20 4.85
165 166 4.821589 AGCGAGCTAACGGGCTGC 62.822 66.667 0.00 8.42 43.20 5.25
166 167 4.821589 GCGAGCTAACGGGCTGCT 62.822 66.667 0.00 0.00 43.20 4.24
168 169 2.202946 GAGCTAACGGGCTGCTCC 60.203 66.667 0.00 0.00 45.12 4.70
169 170 3.003173 AGCTAACGGGCTGCTCCA 61.003 61.111 0.00 0.00 41.43 3.86
172 173 1.524621 CTAACGGGCTGCTCCATGG 60.525 63.158 4.97 4.97 36.21 3.66
173 174 1.971505 CTAACGGGCTGCTCCATGGA 61.972 60.000 15.27 15.27 36.21 3.41
174 175 1.344953 TAACGGGCTGCTCCATGGAT 61.345 55.000 16.63 0.00 36.21 3.41
175 176 2.194056 CGGGCTGCTCCATGGATT 59.806 61.111 16.63 0.00 36.21 3.01
176 177 1.895707 CGGGCTGCTCCATGGATTC 60.896 63.158 16.63 10.95 36.21 2.52
177 178 1.535685 GGGCTGCTCCATGGATTCT 59.464 57.895 16.63 0.00 36.21 2.40
178 179 0.767375 GGGCTGCTCCATGGATTCTA 59.233 55.000 16.63 1.04 36.21 2.10
179 180 1.271271 GGGCTGCTCCATGGATTCTAG 60.271 57.143 16.63 11.95 36.21 2.43
180 181 1.271271 GGCTGCTCCATGGATTCTAGG 60.271 57.143 16.63 3.17 34.01 3.02
181 182 1.696336 GCTGCTCCATGGATTCTAGGA 59.304 52.381 16.63 3.19 0.00 2.94
182 183 2.305343 GCTGCTCCATGGATTCTAGGAT 59.695 50.000 16.63 0.00 0.00 3.24
183 184 3.244840 GCTGCTCCATGGATTCTAGGATT 60.245 47.826 16.63 0.00 0.00 3.01
184 185 4.749166 GCTGCTCCATGGATTCTAGGATTT 60.749 45.833 16.63 0.00 0.00 2.17
185 186 4.722220 TGCTCCATGGATTCTAGGATTTG 58.278 43.478 16.63 0.00 0.00 2.32
186 187 4.413189 TGCTCCATGGATTCTAGGATTTGA 59.587 41.667 16.63 0.00 0.00 2.69
187 188 5.103982 TGCTCCATGGATTCTAGGATTTGAA 60.104 40.000 16.63 0.00 0.00 2.69
188 189 5.472820 GCTCCATGGATTCTAGGATTTGAAG 59.527 44.000 16.63 0.00 0.00 3.02
192 193 5.041191 TGGATTCTAGGATTTGAAGGAGC 57.959 43.478 0.00 0.00 0.00 4.70
193 194 4.474651 TGGATTCTAGGATTTGAAGGAGCA 59.525 41.667 0.00 0.00 0.00 4.26
195 196 5.397334 GGATTCTAGGATTTGAAGGAGCAGT 60.397 44.000 0.00 0.00 0.00 4.40
197 198 2.503895 AGGATTTGAAGGAGCAGTGG 57.496 50.000 0.00 0.00 0.00 4.00
198 199 1.988107 AGGATTTGAAGGAGCAGTGGA 59.012 47.619 0.00 0.00 0.00 4.02
199 200 2.087646 GGATTTGAAGGAGCAGTGGAC 58.912 52.381 0.00 0.00 0.00 4.02
200 201 2.290577 GGATTTGAAGGAGCAGTGGACT 60.291 50.000 0.00 0.00 0.00 3.85
209 210 3.414700 CAGTGGACTGCCGAACGC 61.415 66.667 0.00 0.00 37.15 4.84
220 221 4.667420 CGAACGCGGCCCTAATAT 57.333 55.556 12.47 0.00 0.00 1.28
222 223 0.511221 CGAACGCGGCCCTAATATTG 59.489 55.000 12.47 0.00 0.00 1.90
223 224 1.870580 CGAACGCGGCCCTAATATTGA 60.871 52.381 12.47 0.00 0.00 2.57
224 225 1.798813 GAACGCGGCCCTAATATTGAG 59.201 52.381 12.47 0.00 0.00 3.02
225 226 0.034896 ACGCGGCCCTAATATTGAGG 59.965 55.000 12.47 0.00 0.00 3.86
226 227 0.320374 CGCGGCCCTAATATTGAGGA 59.680 55.000 0.00 0.00 35.99 3.71
227 228 1.066143 CGCGGCCCTAATATTGAGGAT 60.066 52.381 0.00 0.00 35.99 3.24
228 229 2.359900 GCGGCCCTAATATTGAGGATG 58.640 52.381 0.00 2.74 35.99 3.51
229 230 2.941415 GCGGCCCTAATATTGAGGATGG 60.941 54.545 0.00 0.00 35.99 3.51
230 231 2.571653 CGGCCCTAATATTGAGGATGGA 59.428 50.000 0.00 0.00 35.99 3.41
231 232 3.200825 CGGCCCTAATATTGAGGATGGAT 59.799 47.826 0.00 0.00 35.99 3.41
232 233 4.408921 CGGCCCTAATATTGAGGATGGATA 59.591 45.833 0.00 0.00 35.99 2.59
237 238 7.418483 GCCCTAATATTGAGGATGGATAGAGAC 60.418 44.444 9.22 0.00 35.99 3.36
238 239 7.843760 CCCTAATATTGAGGATGGATAGAGACT 59.156 40.741 0.00 0.00 35.99 3.24
239 240 8.912988 CCTAATATTGAGGATGGATAGAGACTC 58.087 40.741 0.00 0.00 35.99 3.36
241 242 8.733092 AATATTGAGGATGGATAGAGACTCAA 57.267 34.615 5.02 7.29 45.49 3.02
243 244 6.662865 TTGAGGATGGATAGAGACTCAATC 57.337 41.667 5.02 0.25 39.29 2.67
244 245 5.083122 TGAGGATGGATAGAGACTCAATCC 58.917 45.833 5.02 8.69 39.76 3.01
246 247 3.829601 GGATGGATAGAGACTCAATCCGT 59.170 47.826 5.02 0.00 41.81 4.69
247 248 5.054390 GATGGATAGAGACTCAATCCGTC 57.946 47.826 5.02 6.96 44.42 4.79
249 250 2.559231 GGATAGAGACTCAATCCGTCCC 59.441 54.545 5.02 0.00 30.50 4.46
252 253 0.976073 GAGACTCAATCCGTCCCCCA 60.976 60.000 0.00 0.00 31.83 4.96
253 254 0.978146 AGACTCAATCCGTCCCCCAG 60.978 60.000 0.00 0.00 31.83 4.45
254 255 2.190578 CTCAATCCGTCCCCCAGC 59.809 66.667 0.00 0.00 0.00 4.85
255 256 2.285368 TCAATCCGTCCCCCAGCT 60.285 61.111 0.00 0.00 0.00 4.24
257 258 3.090532 AATCCGTCCCCCAGCTCC 61.091 66.667 0.00 0.00 0.00 4.70
258 259 3.642741 AATCCGTCCCCCAGCTCCT 62.643 63.158 0.00 0.00 0.00 3.69
259 260 4.779733 TCCGTCCCCCAGCTCCTC 62.780 72.222 0.00 0.00 0.00 3.71
262 263 2.367512 GTCCCCCAGCTCCTCCAT 60.368 66.667 0.00 0.00 0.00 3.41
263 264 2.003548 GTCCCCCAGCTCCTCCATT 61.004 63.158 0.00 0.00 0.00 3.16
265 266 2.761465 CCCCCAGCTCCTCCATTCC 61.761 68.421 0.00 0.00 0.00 3.01
266 267 1.695597 CCCCAGCTCCTCCATTCCT 60.696 63.158 0.00 0.00 0.00 3.36
267 268 1.530771 CCCAGCTCCTCCATTCCTG 59.469 63.158 0.00 0.00 0.00 3.86
268 269 1.277580 CCCAGCTCCTCCATTCCTGT 61.278 60.000 0.00 0.00 0.00 4.00
269 270 0.622665 CCAGCTCCTCCATTCCTGTT 59.377 55.000 0.00 0.00 0.00 3.16
271 272 1.280133 CAGCTCCTCCATTCCTGTTGA 59.720 52.381 0.00 0.00 0.00 3.18
272 273 1.558756 AGCTCCTCCATTCCTGTTGAG 59.441 52.381 0.00 0.00 0.00 3.02
273 274 2.016096 GCTCCTCCATTCCTGTTGAGC 61.016 57.143 0.00 0.00 0.00 4.26
274 275 0.620556 TCCTCCATTCCTGTTGAGCC 59.379 55.000 0.00 0.00 0.00 4.70
275 276 0.622665 CCTCCATTCCTGTTGAGCCT 59.377 55.000 0.00 0.00 0.00 4.58
276 277 1.839994 CCTCCATTCCTGTTGAGCCTA 59.160 52.381 0.00 0.00 0.00 3.93
277 278 2.239654 CCTCCATTCCTGTTGAGCCTAA 59.760 50.000 0.00 0.00 0.00 2.69
279 280 2.026262 TCCATTCCTGTTGAGCCTAACC 60.026 50.000 0.00 0.00 0.00 2.85
280 281 2.369394 CATTCCTGTTGAGCCTAACCC 58.631 52.381 0.00 0.00 0.00 4.11
282 283 1.440618 TCCTGTTGAGCCTAACCCAA 58.559 50.000 0.00 0.00 0.00 4.12
284 285 1.886542 CCTGTTGAGCCTAACCCAAAC 59.113 52.381 0.00 0.00 0.00 2.93
285 286 2.582052 CTGTTGAGCCTAACCCAAACA 58.418 47.619 0.00 0.00 0.00 2.83
286 287 2.554032 CTGTTGAGCCTAACCCAAACAG 59.446 50.000 0.00 0.00 0.00 3.16
289 290 3.274067 GCCTAACCCAAACAGGCG 58.726 61.111 0.00 0.00 44.99 5.52
290 291 1.302993 GCCTAACCCAAACAGGCGA 60.303 57.895 0.00 0.00 44.99 5.54
291 292 1.583495 GCCTAACCCAAACAGGCGAC 61.583 60.000 0.00 0.00 44.99 5.19
292 293 1.296056 CCTAACCCAAACAGGCGACG 61.296 60.000 0.00 0.00 35.39 5.12
293 294 1.296056 CTAACCCAAACAGGCGACGG 61.296 60.000 0.00 0.00 35.39 4.79
294 295 2.042404 TAACCCAAACAGGCGACGGT 62.042 55.000 0.00 0.00 41.96 4.83
299 300 3.427670 AACAGGCGACGGTTTTGG 58.572 55.556 0.00 0.00 46.96 3.28
300 301 2.841160 AACAGGCGACGGTTTTGGC 61.841 57.895 0.00 0.00 46.96 4.52
301 302 4.038080 CAGGCGACGGTTTTGGCC 62.038 66.667 0.00 0.00 45.91 5.36
303 304 3.370231 GGCGACGGTTTTGGCCAT 61.370 61.111 6.09 0.00 44.91 4.40
304 305 2.178273 GCGACGGTTTTGGCCATC 59.822 61.111 6.09 0.00 0.00 3.51
305 306 2.874751 CGACGGTTTTGGCCATCC 59.125 61.111 6.09 9.25 0.00 3.51
306 307 2.696759 CGACGGTTTTGGCCATCCC 61.697 63.158 6.09 5.97 0.00 3.85
307 308 2.675075 ACGGTTTTGGCCATCCCG 60.675 61.111 27.29 27.29 44.06 5.14
308 309 4.128388 CGGTTTTGGCCATCCCGC 62.128 66.667 20.87 5.30 35.87 6.13
309 310 2.994417 GGTTTTGGCCATCCCGCA 60.994 61.111 6.09 0.00 35.87 5.69
310 311 2.261361 GTTTTGGCCATCCCGCAC 59.739 61.111 6.09 0.00 35.87 5.34
311 312 2.117206 TTTTGGCCATCCCGCACT 59.883 55.556 6.09 0.00 35.87 4.40
312 313 2.274645 TTTTGGCCATCCCGCACTG 61.275 57.895 6.09 0.00 35.87 3.66
313 314 2.992817 TTTTGGCCATCCCGCACTGT 62.993 55.000 6.09 0.00 35.87 3.55
314 315 3.918253 TTGGCCATCCCGCACTGTC 62.918 63.158 6.09 0.00 35.87 3.51
317 318 4.758251 CCATCCCGCACTGTCGCA 62.758 66.667 3.79 0.00 0.00 5.10
318 319 3.190849 CATCCCGCACTGTCGCAG 61.191 66.667 5.47 5.47 37.52 5.18
323 324 3.771491 CGCACTGTCGCAGCACTC 61.771 66.667 6.74 0.00 34.37 3.51
326 327 3.606662 ACTGTCGCAGCACTCCGT 61.607 61.111 6.74 0.00 34.37 4.69
327 328 2.356313 CTGTCGCAGCACTCCGTT 60.356 61.111 0.00 0.00 0.00 4.44
328 329 1.956170 CTGTCGCAGCACTCCGTTT 60.956 57.895 0.00 0.00 0.00 3.60
329 330 1.891060 CTGTCGCAGCACTCCGTTTC 61.891 60.000 0.00 0.00 0.00 2.78
334 335 1.160137 GCAGCACTCCGTTTCTGAAT 58.840 50.000 0.00 0.00 0.00 2.57
335 336 1.537202 GCAGCACTCCGTTTCTGAATT 59.463 47.619 0.00 0.00 0.00 2.17
336 337 2.030805 GCAGCACTCCGTTTCTGAATTT 60.031 45.455 0.00 0.00 0.00 1.82
337 338 3.550842 GCAGCACTCCGTTTCTGAATTTT 60.551 43.478 0.00 0.00 0.00 1.82
338 339 4.222114 CAGCACTCCGTTTCTGAATTTTC 58.778 43.478 0.00 0.00 0.00 2.29
339 340 3.882888 AGCACTCCGTTTCTGAATTTTCA 59.117 39.130 0.00 0.00 35.57 2.69
352 353 5.366829 TGAATTTTCAGTCATCTGCACTG 57.633 39.130 0.00 0.00 42.40 3.66
353 354 3.844577 ATTTTCAGTCATCTGCACTGC 57.155 42.857 0.00 0.00 41.04 4.40
355 356 1.516161 TTCAGTCATCTGCACTGCAC 58.484 50.000 0.00 0.00 41.04 4.57
356 357 0.321034 TCAGTCATCTGCACTGCACC 60.321 55.000 0.00 0.00 41.04 5.01
358 359 0.321387 AGTCATCTGCACTGCACCTG 60.321 55.000 0.00 0.81 33.79 4.00
359 360 1.002990 TCATCTGCACTGCACCTGG 60.003 57.895 0.00 0.00 33.79 4.45
362 363 1.200760 ATCTGCACTGCACCTGGGTA 61.201 55.000 0.00 0.00 33.79 3.69
363 364 1.672356 CTGCACTGCACCTGGGTAC 60.672 63.158 0.00 0.00 33.79 3.34
364 365 2.116983 CTGCACTGCACCTGGGTACT 62.117 60.000 0.00 0.00 33.79 2.73
365 366 1.672356 GCACTGCACCTGGGTACTG 60.672 63.158 0.00 0.00 0.00 2.74
367 368 0.108585 CACTGCACCTGGGTACTGTT 59.891 55.000 0.00 0.00 0.00 3.16
369 370 0.687354 CTGCACCTGGGTACTGTTCT 59.313 55.000 0.00 0.00 0.00 3.01
370 371 1.899814 CTGCACCTGGGTACTGTTCTA 59.100 52.381 0.00 0.00 0.00 2.10
371 372 2.501723 CTGCACCTGGGTACTGTTCTAT 59.498 50.000 0.00 0.00 0.00 1.98
372 373 2.236146 TGCACCTGGGTACTGTTCTATG 59.764 50.000 0.00 0.00 0.00 2.23
373 374 2.500098 GCACCTGGGTACTGTTCTATGA 59.500 50.000 0.00 0.00 0.00 2.15
374 375 3.430929 GCACCTGGGTACTGTTCTATGAG 60.431 52.174 0.00 0.00 0.00 2.90
375 376 2.766828 ACCTGGGTACTGTTCTATGAGC 59.233 50.000 0.00 0.00 0.00 4.26
376 377 2.766263 CCTGGGTACTGTTCTATGAGCA 59.234 50.000 0.00 0.00 0.00 4.26
378 379 2.168521 TGGGTACTGTTCTATGAGCAGC 59.831 50.000 10.52 0.00 43.09 5.25
379 380 2.168521 GGGTACTGTTCTATGAGCAGCA 59.831 50.000 10.52 0.00 43.09 4.41
380 381 3.452474 GGTACTGTTCTATGAGCAGCAG 58.548 50.000 10.52 0.00 43.09 4.24
383 384 3.095332 ACTGTTCTATGAGCAGCAGAGA 58.905 45.455 10.52 0.48 43.09 3.10
387 388 4.333913 TTCTATGAGCAGCAGAGAATCC 57.666 45.455 11.19 0.00 46.68 3.01
389 390 2.623878 ATGAGCAGCAGAGAATCCAG 57.376 50.000 0.00 0.00 33.66 3.86
390 391 0.540454 TGAGCAGCAGAGAATCCAGG 59.460 55.000 0.00 0.00 33.66 4.45
391 392 0.540923 GAGCAGCAGAGAATCCAGGT 59.459 55.000 0.00 0.00 33.66 4.00
394 395 2.573462 AGCAGCAGAGAATCCAGGTAAA 59.427 45.455 0.00 0.00 33.66 2.01
396 397 3.563390 GCAGCAGAGAATCCAGGTAAATC 59.437 47.826 0.00 0.00 33.66 2.17
397 398 4.133078 CAGCAGAGAATCCAGGTAAATCC 58.867 47.826 0.00 0.00 33.66 3.01
398 399 3.137360 AGCAGAGAATCCAGGTAAATCCC 59.863 47.826 0.00 0.00 33.40 3.85
400 401 4.385754 GCAGAGAATCCAGGTAAATCCCTT 60.386 45.833 0.00 0.00 33.40 3.95
401 402 5.128919 CAGAGAATCCAGGTAAATCCCTTG 58.871 45.833 0.00 0.00 33.40 3.61
402 403 4.166919 AGAGAATCCAGGTAAATCCCTTGG 59.833 45.833 0.00 0.00 33.40 3.61
403 404 3.205282 AGAATCCAGGTAAATCCCTTGGG 59.795 47.826 0.00 0.00 36.75 4.12
405 406 1.920351 TCCAGGTAAATCCCTTGGGTC 59.080 52.381 5.51 0.00 36.75 4.46
406 407 1.063942 CCAGGTAAATCCCTTGGGTCC 60.064 57.143 5.51 2.85 36.75 4.46
409 410 3.526019 CAGGTAAATCCCTTGGGTCCTTA 59.474 47.826 5.51 0.17 36.75 2.69
410 411 4.017867 CAGGTAAATCCCTTGGGTCCTTAA 60.018 45.833 5.51 0.00 36.75 1.85
411 412 4.608918 AGGTAAATCCCTTGGGTCCTTAAA 59.391 41.667 5.51 0.00 36.75 1.52
413 414 2.828661 ATCCCTTGGGTCCTTAAAGC 57.171 50.000 5.51 0.00 0.00 3.51
414 415 1.755200 TCCCTTGGGTCCTTAAAGCT 58.245 50.000 5.51 0.00 0.00 3.74
416 417 1.354368 CCCTTGGGTCCTTAAAGCTGA 59.646 52.381 0.00 0.00 0.00 4.26
418 419 2.619074 CCTTGGGTCCTTAAAGCTGAGG 60.619 54.545 4.99 4.99 0.00 3.86
419 420 0.328258 TGGGTCCTTAAAGCTGAGGC 59.672 55.000 6.24 2.84 39.06 4.70
420 421 0.328258 GGGTCCTTAAAGCTGAGGCA 59.672 55.000 6.24 0.00 41.70 4.75
421 422 1.064389 GGGTCCTTAAAGCTGAGGCAT 60.064 52.381 6.24 0.00 41.70 4.40
423 424 2.424956 GGTCCTTAAAGCTGAGGCATTG 59.575 50.000 6.24 0.00 41.70 2.82
424 425 2.424956 GTCCTTAAAGCTGAGGCATTGG 59.575 50.000 6.24 0.00 41.70 3.16
425 426 1.135721 CCTTAAAGCTGAGGCATTGGC 59.864 52.381 1.17 1.17 41.70 4.52
429 430 0.893447 AAGCTGAGGCATTGGCTTTC 59.107 50.000 14.57 3.40 41.44 2.62
430 431 0.969409 AGCTGAGGCATTGGCTTTCC 60.969 55.000 14.57 2.38 38.98 3.13
431 432 0.969409 GCTGAGGCATTGGCTTTCCT 60.969 55.000 14.57 0.00 38.98 3.36
432 433 1.553706 CTGAGGCATTGGCTTTCCTT 58.446 50.000 14.57 0.00 38.98 3.36
433 434 1.897802 CTGAGGCATTGGCTTTCCTTT 59.102 47.619 14.57 0.00 38.98 3.11
435 436 1.205655 GAGGCATTGGCTTTCCTTTCC 59.794 52.381 14.57 0.00 38.98 3.13
436 437 0.975887 GGCATTGGCTTTCCTTTCCA 59.024 50.000 2.42 0.00 40.87 3.53
437 438 1.556451 GGCATTGGCTTTCCTTTCCAT 59.444 47.619 2.42 0.00 40.87 3.41
438 439 2.765699 GGCATTGGCTTTCCTTTCCATA 59.234 45.455 2.42 0.00 40.87 2.74
439 440 3.389002 GGCATTGGCTTTCCTTTCCATAT 59.611 43.478 2.42 0.00 40.87 1.78
440 441 4.374399 GCATTGGCTTTCCTTTCCATATG 58.626 43.478 0.00 0.00 36.96 1.78
441 442 4.141869 GCATTGGCTTTCCTTTCCATATGT 60.142 41.667 1.24 0.00 36.96 2.29
443 444 6.406849 GCATTGGCTTTCCTTTCCATATGTAA 60.407 38.462 1.24 0.00 36.96 2.41
444 445 6.524101 TTGGCTTTCCTTTCCATATGTAAC 57.476 37.500 1.24 0.00 0.00 2.50
445 446 5.826643 TGGCTTTCCTTTCCATATGTAACT 58.173 37.500 1.24 0.00 0.00 2.24
446 447 6.252995 TGGCTTTCCTTTCCATATGTAACTT 58.747 36.000 1.24 0.00 0.00 2.66
447 448 6.377146 TGGCTTTCCTTTCCATATGTAACTTC 59.623 38.462 1.24 0.00 0.00 3.01
449 450 6.093633 GCTTTCCTTTCCATATGTAACTTCGT 59.906 38.462 1.24 0.00 0.00 3.85
450 451 7.605410 TTTCCTTTCCATATGTAACTTCGTC 57.395 36.000 1.24 0.00 0.00 4.20
451 452 5.345702 TCCTTTCCATATGTAACTTCGTCG 58.654 41.667 1.24 0.00 0.00 5.12
452 453 5.105635 TCCTTTCCATATGTAACTTCGTCGT 60.106 40.000 1.24 0.00 0.00 4.34
453 454 5.231568 CCTTTCCATATGTAACTTCGTCGTC 59.768 44.000 1.24 0.00 0.00 4.20
454 455 3.943958 TCCATATGTAACTTCGTCGTCG 58.056 45.455 1.24 0.00 38.55 5.12
456 457 3.722780 CCATATGTAACTTCGTCGTCGAC 59.277 47.826 15.51 15.51 46.03 4.20
457 458 2.975410 ATGTAACTTCGTCGTCGACA 57.025 45.000 24.13 9.46 46.03 4.35
458 459 2.975410 TGTAACTTCGTCGTCGACAT 57.025 45.000 24.13 7.80 46.03 3.06
459 460 2.577450 TGTAACTTCGTCGTCGACATG 58.423 47.619 24.13 15.03 46.03 3.21
460 461 1.316735 GTAACTTCGTCGTCGACATGC 59.683 52.381 24.13 3.68 46.03 4.06
461 462 1.007336 AACTTCGTCGTCGACATGCC 61.007 55.000 24.13 0.00 46.03 4.40
462 463 1.443702 CTTCGTCGTCGACATGCCA 60.444 57.895 24.13 2.96 46.03 4.92
463 464 1.406219 CTTCGTCGTCGACATGCCAG 61.406 60.000 24.13 7.68 46.03 4.85
464 465 3.545481 CGTCGTCGACATGCCAGC 61.545 66.667 24.13 0.00 39.71 4.85
466 467 2.432456 TCGTCGACATGCCAGCAC 60.432 61.111 17.16 0.00 0.00 4.40
468 469 2.738521 GTCGACATGCCAGCACGT 60.739 61.111 11.55 0.00 0.00 4.49
469 470 2.432456 TCGACATGCCAGCACGTC 60.432 61.111 8.71 8.71 36.02 4.34
470 471 3.490759 CGACATGCCAGCACGTCC 61.491 66.667 12.69 0.00 35.98 4.79
472 473 1.746615 GACATGCCAGCACGTCCAT 60.747 57.895 7.59 0.00 33.62 3.41
473 474 0.461870 GACATGCCAGCACGTCCATA 60.462 55.000 7.59 0.00 33.62 2.74
474 475 0.462581 ACATGCCAGCACGTCCATAG 60.463 55.000 0.00 0.00 0.00 2.23
475 476 1.524621 ATGCCAGCACGTCCATAGC 60.525 57.895 0.00 0.00 0.00 2.97
478 479 1.815421 CCAGCACGTCCATAGCCAC 60.815 63.158 0.00 0.00 0.00 5.01
479 480 1.079197 CAGCACGTCCATAGCCACA 60.079 57.895 0.00 0.00 0.00 4.17
480 481 1.086067 CAGCACGTCCATAGCCACAG 61.086 60.000 0.00 0.00 0.00 3.66
481 482 1.815421 GCACGTCCATAGCCACAGG 60.815 63.158 0.00 0.00 0.00 4.00
482 483 1.897423 CACGTCCATAGCCACAGGA 59.103 57.895 0.00 0.00 0.00 3.86
483 484 0.179100 CACGTCCATAGCCACAGGAG 60.179 60.000 0.00 0.00 30.78 3.69
484 485 1.227380 CGTCCATAGCCACAGGAGC 60.227 63.158 0.00 0.00 30.78 4.70
485 486 1.907739 GTCCATAGCCACAGGAGCA 59.092 57.895 0.00 0.00 30.78 4.26
486 487 0.462759 GTCCATAGCCACAGGAGCAC 60.463 60.000 0.00 0.00 30.78 4.40
487 488 1.153086 CCATAGCCACAGGAGCACC 60.153 63.158 0.00 0.00 0.00 5.01
491 492 0.835971 TAGCCACAGGAGCACCTTCA 60.836 55.000 0.00 0.00 45.36 3.02
492 493 1.673665 GCCACAGGAGCACCTTCAG 60.674 63.158 0.00 0.00 45.36 3.02
493 494 1.757306 CCACAGGAGCACCTTCAGT 59.243 57.895 0.00 0.00 45.36 3.41
494 495 0.976641 CCACAGGAGCACCTTCAGTA 59.023 55.000 0.00 0.00 45.36 2.74
496 497 1.620819 CACAGGAGCACCTTCAGTAGT 59.379 52.381 0.00 0.00 45.36 2.73
497 498 2.037772 CACAGGAGCACCTTCAGTAGTT 59.962 50.000 0.00 0.00 45.36 2.24
498 499 2.037772 ACAGGAGCACCTTCAGTAGTTG 59.962 50.000 0.00 0.00 45.36 3.16
499 500 1.002544 AGGAGCACCTTCAGTAGTTGC 59.997 52.381 0.00 0.00 45.36 4.17
503 504 3.600388 AGCACCTTCAGTAGTTGCATAC 58.400 45.455 0.00 0.00 0.00 2.39
504 505 3.007940 AGCACCTTCAGTAGTTGCATACA 59.992 43.478 0.00 0.00 0.00 2.29
505 506 3.125316 GCACCTTCAGTAGTTGCATACAC 59.875 47.826 0.58 0.00 0.00 2.90
506 507 4.569943 CACCTTCAGTAGTTGCATACACT 58.430 43.478 0.58 0.00 0.00 3.55
509 510 4.389992 CCTTCAGTAGTTGCATACACTGTG 59.610 45.833 16.91 6.19 37.27 3.66
510 511 3.325870 TCAGTAGTTGCATACACTGTGC 58.674 45.455 16.91 0.00 42.81 4.57
511 512 2.416547 CAGTAGTTGCATACACTGTGCC 59.583 50.000 7.90 0.00 41.83 5.01
512 513 2.303022 AGTAGTTGCATACACTGTGCCT 59.697 45.455 7.90 0.00 41.83 4.75
513 514 1.813513 AGTTGCATACACTGTGCCTC 58.186 50.000 7.90 0.00 41.83 4.70
515 516 2.567169 AGTTGCATACACTGTGCCTCTA 59.433 45.455 7.90 0.00 41.83 2.43
516 517 2.672961 TGCATACACTGTGCCTCTAC 57.327 50.000 7.90 0.00 41.83 2.59
517 518 1.899142 TGCATACACTGTGCCTCTACA 59.101 47.619 7.90 0.00 41.83 2.74
518 519 2.271800 GCATACACTGTGCCTCTACAC 58.728 52.381 7.90 0.00 41.10 2.90
526 527 2.540383 TGTGCCTCTACACATCTTCCT 58.460 47.619 0.00 0.00 45.36 3.36
534 535 3.639099 CACATCTTCCTGTGCACCT 57.361 52.632 15.69 0.00 40.03 4.00
535 536 1.446907 CACATCTTCCTGTGCACCTC 58.553 55.000 15.69 0.00 40.03 3.85
536 537 0.326264 ACATCTTCCTGTGCACCTCC 59.674 55.000 15.69 0.00 0.00 4.30
537 538 0.742281 CATCTTCCTGTGCACCTCCG 60.742 60.000 15.69 0.00 0.00 4.63
538 539 1.903877 ATCTTCCTGTGCACCTCCGG 61.904 60.000 15.69 9.66 0.00 5.14
539 540 2.525629 TTCCTGTGCACCTCCGGA 60.526 61.111 15.69 11.91 0.00 5.14
540 541 2.513026 CTTCCTGTGCACCTCCGGAG 62.513 65.000 25.36 25.36 0.00 4.63
584 3552 2.170187 ACAGACATGGCCAAAAGCAAAA 59.830 40.909 10.96 0.00 46.50 2.44
591 3559 1.334556 GGCCAAAAGCAAAAGCAAAGG 59.665 47.619 0.00 0.00 46.50 3.11
592 3560 1.268692 GCCAAAAGCAAAAGCAAAGGC 60.269 47.619 0.00 0.00 42.97 4.35
593 3561 2.015587 CCAAAAGCAAAAGCAAAGGCA 58.984 42.857 0.00 0.00 44.61 4.75
594 3562 2.422832 CCAAAAGCAAAAGCAAAGGCAA 59.577 40.909 0.00 0.00 44.61 4.52
595 3563 3.119566 CCAAAAGCAAAAGCAAAGGCAAA 60.120 39.130 0.00 0.00 44.61 3.68
596 3564 4.099824 CAAAAGCAAAAGCAAAGGCAAAG 58.900 39.130 0.00 0.00 44.61 2.77
597 3565 2.985957 AGCAAAAGCAAAGGCAAAGA 57.014 40.000 0.00 0.00 44.61 2.52
598 3566 2.554142 AGCAAAAGCAAAGGCAAAGAC 58.446 42.857 0.00 0.00 44.61 3.01
599 3567 2.169144 AGCAAAAGCAAAGGCAAAGACT 59.831 40.909 0.00 0.00 44.61 3.24
600 3568 2.286025 GCAAAAGCAAAGGCAAAGACTG 59.714 45.455 0.00 0.00 44.61 3.51
601 3569 3.784338 CAAAAGCAAAGGCAAAGACTGA 58.216 40.909 0.00 0.00 44.61 3.41
602 3570 4.183101 CAAAAGCAAAGGCAAAGACTGAA 58.817 39.130 0.00 0.00 44.61 3.02
603 3571 4.470334 AAAGCAAAGGCAAAGACTGAAA 57.530 36.364 0.00 0.00 44.61 2.69
604 3572 3.722728 AGCAAAGGCAAAGACTGAAAG 57.277 42.857 0.00 0.00 44.61 2.62
605 3573 3.290710 AGCAAAGGCAAAGACTGAAAGA 58.709 40.909 0.00 0.00 44.61 2.52
614 3582 4.786609 GCAAAGACTGAAAGACACGAAAGG 60.787 45.833 0.00 0.00 37.43 3.11
632 3600 1.004394 AGGGACCTTCCAAATCGAACC 59.996 52.381 0.00 0.00 38.64 3.62
634 3602 2.510613 GGACCTTCCAAATCGAACCAA 58.489 47.619 0.00 0.00 36.28 3.67
638 3606 3.067601 ACCTTCCAAATCGAACCAACAAC 59.932 43.478 0.00 0.00 0.00 3.32
639 3607 3.552068 CCTTCCAAATCGAACCAACAACC 60.552 47.826 0.00 0.00 0.00 3.77
640 3608 2.656002 TCCAAATCGAACCAACAACCA 58.344 42.857 0.00 0.00 0.00 3.67
641 3609 3.024547 TCCAAATCGAACCAACAACCAA 58.975 40.909 0.00 0.00 0.00 3.67
642 3610 3.067461 TCCAAATCGAACCAACAACCAAG 59.933 43.478 0.00 0.00 0.00 3.61
643 3611 3.380142 CAAATCGAACCAACAACCAAGG 58.620 45.455 0.00 0.00 0.00 3.61
644 3612 2.649531 ATCGAACCAACAACCAAGGA 57.350 45.000 0.00 0.00 0.00 3.36
645 3613 1.961793 TCGAACCAACAACCAAGGAG 58.038 50.000 0.00 0.00 0.00 3.69
646 3614 1.487142 TCGAACCAACAACCAAGGAGA 59.513 47.619 0.00 0.00 0.00 3.71
647 3615 1.873591 CGAACCAACAACCAAGGAGAG 59.126 52.381 0.00 0.00 0.00 3.20
648 3616 2.230660 GAACCAACAACCAAGGAGAGG 58.769 52.381 0.00 0.00 0.00 3.69
649 3617 1.518367 ACCAACAACCAAGGAGAGGA 58.482 50.000 0.00 0.00 0.00 3.71
650 3618 1.421646 ACCAACAACCAAGGAGAGGAG 59.578 52.381 0.00 0.00 0.00 3.69
651 3619 1.699634 CCAACAACCAAGGAGAGGAGA 59.300 52.381 0.00 0.00 0.00 3.71
652 3620 2.289945 CCAACAACCAAGGAGAGGAGAG 60.290 54.545 0.00 0.00 0.00 3.20
653 3621 0.980423 ACAACCAAGGAGAGGAGAGC 59.020 55.000 0.00 0.00 0.00 4.09
654 3622 0.251634 CAACCAAGGAGAGGAGAGCC 59.748 60.000 0.00 0.00 0.00 4.70
655 3623 0.178891 AACCAAGGAGAGGAGAGCCA 60.179 55.000 0.00 0.00 36.29 4.75
656 3624 0.178891 ACCAAGGAGAGGAGAGCCAA 60.179 55.000 0.00 0.00 36.29 4.52
657 3625 0.540923 CCAAGGAGAGGAGAGCCAAG 59.459 60.000 0.00 0.00 36.29 3.61
658 3626 1.274712 CAAGGAGAGGAGAGCCAAGT 58.725 55.000 0.00 0.00 36.29 3.16
659 3627 1.627834 CAAGGAGAGGAGAGCCAAGTT 59.372 52.381 0.00 0.00 36.29 2.66
660 3628 2.037385 AGGAGAGGAGAGCCAAGTTT 57.963 50.000 0.00 0.00 36.29 2.66
661 3629 1.905894 AGGAGAGGAGAGCCAAGTTTC 59.094 52.381 0.00 0.00 36.29 2.78
662 3630 1.625818 GGAGAGGAGAGCCAAGTTTCA 59.374 52.381 0.00 0.00 36.29 2.69
663 3631 2.614229 GGAGAGGAGAGCCAAGTTTCAC 60.614 54.545 0.00 0.00 36.29 3.18
664 3632 2.301583 GAGAGGAGAGCCAAGTTTCACT 59.698 50.000 0.00 0.00 36.29 3.41
665 3633 2.301583 AGAGGAGAGCCAAGTTTCACTC 59.698 50.000 0.00 0.00 36.29 3.51
666 3634 1.001406 AGGAGAGCCAAGTTTCACTCG 59.999 52.381 0.00 0.00 36.29 4.18
667 3635 1.433534 GAGAGCCAAGTTTCACTCGG 58.566 55.000 0.00 0.00 34.31 4.63
668 3636 1.000955 GAGAGCCAAGTTTCACTCGGA 59.999 52.381 0.00 0.00 34.31 4.55
669 3637 1.416401 AGAGCCAAGTTTCACTCGGAA 59.584 47.619 0.00 0.00 34.31 4.30
670 3638 2.158813 AGAGCCAAGTTTCACTCGGAAA 60.159 45.455 0.00 0.00 43.07 3.13
671 3639 2.616842 GAGCCAAGTTTCACTCGGAAAA 59.383 45.455 0.00 0.00 46.53 2.29
672 3640 2.357952 AGCCAAGTTTCACTCGGAAAAC 59.642 45.455 0.00 0.00 46.53 2.43
673 3641 2.853281 GCCAAGTTTCACTCGGAAAACG 60.853 50.000 0.00 0.00 46.53 3.60
692 3660 1.584308 CGAGACGAGGAAAGCGAAATC 59.416 52.381 0.00 0.00 0.00 2.17
696 3664 1.078709 CGAGGAAAGCGAAATCAGCA 58.921 50.000 0.00 0.00 37.01 4.41
697 3665 1.061711 CGAGGAAAGCGAAATCAGCAG 59.938 52.381 0.00 0.00 37.01 4.24
698 3666 2.350522 GAGGAAAGCGAAATCAGCAGA 58.649 47.619 0.00 0.00 37.01 4.26
699 3667 2.351111 GAGGAAAGCGAAATCAGCAGAG 59.649 50.000 0.00 0.00 37.01 3.35
700 3668 1.202121 GGAAAGCGAAATCAGCAGAGC 60.202 52.381 0.00 0.00 37.01 4.09
701 3669 0.807496 AAAGCGAAATCAGCAGAGCC 59.193 50.000 0.00 0.00 37.01 4.70
703 3671 0.321919 AGCGAAATCAGCAGAGCCAA 60.322 50.000 0.00 0.00 37.01 4.52
705 3673 1.133790 GCGAAATCAGCAGAGCCAAAT 59.866 47.619 0.00 0.00 34.19 2.32
706 3674 2.793933 CGAAATCAGCAGAGCCAAATG 58.206 47.619 0.00 0.00 0.00 2.32
722 3690 5.859495 GCCAAATGCTTCTAGATACTACCT 58.141 41.667 0.00 0.00 36.87 3.08
723 3691 6.994221 GCCAAATGCTTCTAGATACTACCTA 58.006 40.000 0.00 0.00 36.87 3.08
724 3692 6.869388 GCCAAATGCTTCTAGATACTACCTAC 59.131 42.308 0.00 0.00 36.87 3.18
725 3693 7.256012 GCCAAATGCTTCTAGATACTACCTACT 60.256 40.741 0.00 0.00 36.87 2.57
726 3694 9.298250 CCAAATGCTTCTAGATACTACCTACTA 57.702 37.037 0.00 0.00 0.00 1.82
728 3696 9.863650 AAATGCTTCTAGATACTACCTACTACA 57.136 33.333 0.00 0.00 0.00 2.74
729 3697 9.509956 AATGCTTCTAGATACTACCTACTACAG 57.490 37.037 0.00 0.00 0.00 2.74
730 3698 8.032045 TGCTTCTAGATACTACCTACTACAGT 57.968 38.462 0.00 0.00 0.00 3.55
731 3699 8.149647 TGCTTCTAGATACTACCTACTACAGTC 58.850 40.741 0.00 0.00 0.00 3.51
748 3716 2.259204 CGTTCGGTCCAACGGCTA 59.741 61.111 14.93 0.00 44.43 3.93
794 3771 1.068121 CTTGTCCCTTCCTCCACCTT 58.932 55.000 0.00 0.00 0.00 3.50
801 3778 1.351017 CCTTCCTCCACCTTACTGCAA 59.649 52.381 0.00 0.00 0.00 4.08
814 3801 5.011023 ACCTTACTGCAATTCCTTTTTCCTG 59.989 40.000 0.00 0.00 0.00 3.86
840 3827 1.127343 CCATCCTTGTCCTCCTCCTC 58.873 60.000 0.00 0.00 0.00 3.71
841 3828 1.343884 CCATCCTTGTCCTCCTCCTCT 60.344 57.143 0.00 0.00 0.00 3.69
842 3829 2.476199 CATCCTTGTCCTCCTCCTCTT 58.524 52.381 0.00 0.00 0.00 2.85
843 3830 2.723530 TCCTTGTCCTCCTCCTCTTT 57.276 50.000 0.00 0.00 0.00 2.52
844 3831 2.541466 TCCTTGTCCTCCTCCTCTTTC 58.459 52.381 0.00 0.00 0.00 2.62
966 3962 2.998670 CAAATCGATCTCCCATCATCCG 59.001 50.000 0.00 0.00 0.00 4.18
967 3963 0.534412 ATCGATCTCCCATCATCCGC 59.466 55.000 0.00 0.00 0.00 5.54
983 3982 1.065418 TCCGCCCATTCTTCCTTCTTC 60.065 52.381 0.00 0.00 0.00 2.87
1020 4019 2.202987 GATGCAGACGGAGCAGGG 60.203 66.667 0.00 0.00 46.36 4.45
1089 4091 2.499685 CCGCTGGCACCCTACTAC 59.500 66.667 0.00 0.00 0.00 2.73
1097 4117 4.136051 CTGGCACCCTACTACTACTACTC 58.864 52.174 0.00 0.00 0.00 2.59
1098 4118 3.137533 GGCACCCTACTACTACTACTCG 58.862 54.545 0.00 0.00 0.00 4.18
1284 4313 3.462678 GCCTCCGACTCCTCCACC 61.463 72.222 0.00 0.00 0.00 4.61
1288 4317 4.715130 CCGACTCCTCCACCCCCA 62.715 72.222 0.00 0.00 0.00 4.96
1362 4391 2.852075 AGCAACACCCCCTCCGAA 60.852 61.111 0.00 0.00 0.00 4.30
1522 4566 2.285743 AGTTCCAGGAGGGGGAGC 60.286 66.667 0.00 0.00 35.46 4.70
1653 4697 1.231958 CCGGCAAACAAGCTCCGTTA 61.232 55.000 8.30 0.00 40.23 3.18
1758 4805 3.793144 CAGCAAGAAGACGGCGCC 61.793 66.667 19.07 19.07 0.00 6.53
1791 4838 2.825836 GGCACTCGCTTCCATGGG 60.826 66.667 13.02 0.00 38.60 4.00
1882 4933 3.131400 ACTCGGCTTAGGCAAAACAAAAA 59.869 39.130 6.60 0.00 40.87 1.94
1908 4988 3.018856 TGCCGCTTGAAAGATTCATGAT 58.981 40.909 0.00 0.00 39.84 2.45
1942 5122 2.128035 GTGTCACAGGTTCAGTTCTCG 58.872 52.381 0.00 0.00 0.00 4.04
2041 5264 8.220755 TGCCTGATTTACTGTAATATTTGGAC 57.779 34.615 0.37 0.00 0.00 4.02
2166 5392 4.097892 GTGGAACAACTGTGACCAAGAAAT 59.902 41.667 9.57 0.00 44.16 2.17
2181 5407 5.893824 ACCAAGAAATTGAAACTTCAGAGGT 59.106 36.000 0.00 0.00 38.61 3.85
2186 5412 5.613358 AATTGAAACTTCAGAGGTAAGCG 57.387 39.130 0.00 0.00 38.61 4.68
2194 5420 3.594603 TCAGAGGTAAGCGAAAGAAGG 57.405 47.619 0.00 0.00 0.00 3.46
2206 5432 3.124297 GCGAAAGAAGGACATGAAGTGAG 59.876 47.826 0.00 0.00 0.00 3.51
2235 5466 0.402121 AACTGGAGTTCTGGCCCTTC 59.598 55.000 0.00 0.00 31.64 3.46
2304 5535 6.037726 CACCAAAACCTTACTAAAACACCAC 58.962 40.000 0.00 0.00 0.00 4.16
2310 5541 7.426606 AACCTTACTAAAACACCACCAAATT 57.573 32.000 0.00 0.00 0.00 1.82
2318 5549 5.529581 AAACACCACCAAATTTCGAGATT 57.470 34.783 0.00 0.00 0.00 2.40
2322 5553 3.818773 ACCACCAAATTTCGAGATTTCGT 59.181 39.130 10.74 8.23 46.72 3.85
2335 5567 2.498481 AGATTTCGTCCCCGTTACATCA 59.502 45.455 0.00 0.00 35.01 3.07
2342 5575 3.706055 CCCGTTACATCATCAGGGG 57.294 57.895 0.00 0.00 35.36 4.79
2363 5613 0.901580 CAGGGGCAAAATGGCTGTCT 60.902 55.000 3.86 0.00 43.20 3.41
2393 5648 4.868171 CGTTGATTTCTTGGACTCGGATAA 59.132 41.667 0.00 0.00 0.00 1.75
2398 5653 8.348285 TGATTTCTTGGACTCGGATAATTTTT 57.652 30.769 0.00 0.00 0.00 1.94
2399 5654 9.456147 TGATTTCTTGGACTCGGATAATTTTTA 57.544 29.630 0.00 0.00 0.00 1.52
2402 5657 8.446599 TTCTTGGACTCGGATAATTTTTATCC 57.553 34.615 13.88 13.88 39.98 2.59
2595 5969 6.798482 TGCATAGTGGCATCAAAATAGAAAG 58.202 36.000 0.00 0.00 39.25 2.62
2618 5992 5.921408 AGAGAAAAGAGTACATGACGTGAAC 59.079 40.000 0.00 0.00 0.00 3.18
2653 6027 2.125106 GCGACTTTGGCCGGATCT 60.125 61.111 5.05 0.00 0.00 2.75
2837 6215 0.255890 TTGGAACTCCATAGCCAGGC 59.744 55.000 1.84 1.84 46.97 4.85
2838 6216 1.149401 GGAACTCCATAGCCAGGCC 59.851 63.158 8.22 0.00 35.64 5.19
2839 6217 1.635817 GGAACTCCATAGCCAGGCCA 61.636 60.000 8.22 0.00 35.64 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.515562 CCTAGGCCACAGATCCTATTCT 58.484 50.000 5.01 0.00 34.69 2.40
2 3 2.027653 GCCTAGGCCACAGATCCTATTC 60.028 54.545 24.19 0.00 34.69 1.75
3 4 1.981495 GCCTAGGCCACAGATCCTATT 59.019 52.381 24.19 0.00 34.69 1.73
4 5 1.150986 AGCCTAGGCCACAGATCCTAT 59.849 52.381 30.42 3.80 43.17 2.57
5 6 0.563173 AGCCTAGGCCACAGATCCTA 59.437 55.000 30.42 0.00 43.17 2.94
6 7 0.327000 AAGCCTAGGCCACAGATCCT 60.327 55.000 30.42 5.22 43.17 3.24
7 8 0.548510 AAAGCCTAGGCCACAGATCC 59.451 55.000 30.42 0.00 43.17 3.36
9 10 2.907458 AAAAAGCCTAGGCCACAGAT 57.093 45.000 30.42 7.73 43.17 2.90
10 11 2.026262 CCTAAAAAGCCTAGGCCACAGA 60.026 50.000 30.42 12.30 43.17 3.41
11 12 2.290960 ACCTAAAAAGCCTAGGCCACAG 60.291 50.000 30.42 18.58 39.78 3.66
12 13 1.708551 ACCTAAAAAGCCTAGGCCACA 59.291 47.619 30.42 10.30 39.78 4.17
13 14 2.026169 AGACCTAAAAAGCCTAGGCCAC 60.026 50.000 30.42 10.64 39.78 5.01
14 15 2.275466 AGACCTAAAAAGCCTAGGCCA 58.725 47.619 30.42 9.58 39.78 5.36
15 16 4.708576 ATAGACCTAAAAAGCCTAGGCC 57.291 45.455 30.42 12.55 39.78 5.19
19 20 9.396022 CATCAAGAAATAGACCTAAAAAGCCTA 57.604 33.333 0.00 0.00 0.00 3.93
20 21 8.109634 TCATCAAGAAATAGACCTAAAAAGCCT 58.890 33.333 0.00 0.00 0.00 4.58
22 23 9.727627 CATCATCAAGAAATAGACCTAAAAAGC 57.272 33.333 0.00 0.00 0.00 3.51
29 30 9.995003 GAGAATACATCATCAAGAAATAGACCT 57.005 33.333 0.00 0.00 0.00 3.85
30 31 9.995003 AGAGAATACATCATCAAGAAATAGACC 57.005 33.333 0.00 0.00 0.00 3.85
75 76 7.363617 GCGCCCTAGGTGTATAAATATAGTCTT 60.364 40.741 8.29 0.00 35.34 3.01
76 77 6.096564 GCGCCCTAGGTGTATAAATATAGTCT 59.903 42.308 8.29 0.00 35.34 3.24
77 78 6.096564 AGCGCCCTAGGTGTATAAATATAGTC 59.903 42.308 8.29 0.00 35.34 2.59
78 79 5.956563 AGCGCCCTAGGTGTATAAATATAGT 59.043 40.000 8.29 0.00 35.34 2.12
79 80 6.461231 GGAGCGCCCTAGGTGTATAAATATAG 60.461 46.154 8.29 0.00 35.34 1.31
81 82 4.161754 GGAGCGCCCTAGGTGTATAAATAT 59.838 45.833 8.29 0.00 35.34 1.28
83 84 2.302157 GGAGCGCCCTAGGTGTATAAAT 59.698 50.000 8.29 0.00 35.34 1.40
84 85 1.690352 GGAGCGCCCTAGGTGTATAAA 59.310 52.381 8.29 0.00 35.34 1.40
85 86 1.335145 GGAGCGCCCTAGGTGTATAA 58.665 55.000 8.29 0.00 35.34 0.98
86 87 0.892358 CGGAGCGCCCTAGGTGTATA 60.892 60.000 8.29 0.00 35.34 1.47
87 88 2.201022 CGGAGCGCCCTAGGTGTAT 61.201 63.158 8.29 0.00 35.34 2.29
88 89 2.831742 CGGAGCGCCCTAGGTGTA 60.832 66.667 8.29 0.00 35.34 2.90
110 111 2.680352 TCTGTCCACTCCGGGAGC 60.680 66.667 23.84 8.14 37.71 4.70
112 113 2.680352 GCTCTGTCCACTCCGGGA 60.680 66.667 0.00 0.00 34.36 5.14
113 114 2.681778 AGCTCTGTCCACTCCGGG 60.682 66.667 0.00 0.00 34.36 5.73
115 116 1.943116 CTCCAGCTCTGTCCACTCCG 61.943 65.000 0.00 0.00 0.00 4.63
117 118 0.972883 AACTCCAGCTCTGTCCACTC 59.027 55.000 0.00 0.00 0.00 3.51
118 119 2.310779 TAACTCCAGCTCTGTCCACT 57.689 50.000 0.00 0.00 0.00 4.00
120 121 4.345257 GGATTATAACTCCAGCTCTGTCCA 59.655 45.833 8.31 0.00 32.72 4.02
122 123 4.591072 AGGGATTATAACTCCAGCTCTGTC 59.409 45.833 12.91 0.00 34.24 3.51
123 124 4.346418 CAGGGATTATAACTCCAGCTCTGT 59.654 45.833 12.91 0.00 34.24 3.41
124 125 4.590647 TCAGGGATTATAACTCCAGCTCTG 59.409 45.833 12.91 10.91 34.24 3.35
125 126 4.820775 TCAGGGATTATAACTCCAGCTCT 58.179 43.478 12.91 2.57 34.24 4.09
126 127 5.546526 CTTCAGGGATTATAACTCCAGCTC 58.453 45.833 12.91 0.00 34.24 4.09
127 128 4.202409 GCTTCAGGGATTATAACTCCAGCT 60.202 45.833 12.91 0.00 34.24 4.24
130 131 3.964688 TCGCTTCAGGGATTATAACTCCA 59.035 43.478 12.91 0.00 34.24 3.86
131 132 4.561105 CTCGCTTCAGGGATTATAACTCC 58.439 47.826 0.00 0.00 36.39 3.85
132 133 3.991121 GCTCGCTTCAGGGATTATAACTC 59.009 47.826 0.00 0.00 36.39 3.01
133 134 3.643792 AGCTCGCTTCAGGGATTATAACT 59.356 43.478 0.00 0.00 36.39 2.24
134 135 3.996480 AGCTCGCTTCAGGGATTATAAC 58.004 45.455 0.00 0.00 36.39 1.89
135 136 5.539048 GTTAGCTCGCTTCAGGGATTATAA 58.461 41.667 0.00 0.00 36.39 0.98
137 138 3.553096 CGTTAGCTCGCTTCAGGGATTAT 60.553 47.826 0.00 0.00 36.39 1.28
138 139 2.223735 CGTTAGCTCGCTTCAGGGATTA 60.224 50.000 0.00 0.00 36.39 1.75
139 140 1.471676 CGTTAGCTCGCTTCAGGGATT 60.472 52.381 0.00 0.00 36.39 3.01
140 141 0.103208 CGTTAGCTCGCTTCAGGGAT 59.897 55.000 0.00 0.00 36.39 3.85
141 142 1.511305 CGTTAGCTCGCTTCAGGGA 59.489 57.895 0.00 0.00 35.61 4.20
142 143 1.519455 CCGTTAGCTCGCTTCAGGG 60.519 63.158 0.00 0.00 0.00 4.45
144 145 2.167861 GCCCGTTAGCTCGCTTCAG 61.168 63.158 0.00 0.00 0.00 3.02
145 146 2.125673 GCCCGTTAGCTCGCTTCA 60.126 61.111 0.00 0.00 0.00 3.02
146 147 2.167861 CAGCCCGTTAGCTCGCTTC 61.168 63.158 0.00 0.00 42.61 3.86
147 148 2.125512 CAGCCCGTTAGCTCGCTT 60.126 61.111 0.00 0.00 42.61 4.68
149 150 4.821589 AGCAGCCCGTTAGCTCGC 62.822 66.667 0.00 0.00 42.61 5.03
152 153 2.370445 ATGGAGCAGCCCGTTAGCT 61.370 57.895 0.00 0.00 46.45 3.32
153 154 2.182842 CATGGAGCAGCCCGTTAGC 61.183 63.158 0.00 0.00 34.97 3.09
154 155 1.524621 CCATGGAGCAGCCCGTTAG 60.525 63.158 5.56 0.00 34.97 2.34
155 156 1.344953 ATCCATGGAGCAGCCCGTTA 61.345 55.000 21.33 0.00 34.97 3.18
156 157 2.215451 AATCCATGGAGCAGCCCGTT 62.215 55.000 21.33 3.74 34.97 4.44
158 159 1.895707 GAATCCATGGAGCAGCCCG 60.896 63.158 21.33 0.00 34.97 6.13
159 160 0.767375 TAGAATCCATGGAGCAGCCC 59.233 55.000 21.33 5.28 34.97 5.19
160 161 1.271271 CCTAGAATCCATGGAGCAGCC 60.271 57.143 21.33 7.01 37.10 4.85
161 162 1.696336 TCCTAGAATCCATGGAGCAGC 59.304 52.381 21.33 9.02 0.00 5.25
162 163 4.637387 AATCCTAGAATCCATGGAGCAG 57.363 45.455 21.33 13.12 31.59 4.24
163 164 4.413189 TCAAATCCTAGAATCCATGGAGCA 59.587 41.667 21.33 3.99 31.59 4.26
164 165 4.978099 TCAAATCCTAGAATCCATGGAGC 58.022 43.478 21.33 14.50 31.59 4.70
165 166 6.002704 CCTTCAAATCCTAGAATCCATGGAG 58.997 44.000 21.33 5.74 31.59 3.86
166 167 5.671735 TCCTTCAAATCCTAGAATCCATGGA 59.328 40.000 18.88 18.88 0.00 3.41
168 169 5.472820 GCTCCTTCAAATCCTAGAATCCATG 59.527 44.000 0.00 0.00 0.00 3.66
169 170 5.133322 TGCTCCTTCAAATCCTAGAATCCAT 59.867 40.000 0.00 0.00 0.00 3.41
172 173 5.526846 CACTGCTCCTTCAAATCCTAGAATC 59.473 44.000 0.00 0.00 0.00 2.52
173 174 5.435291 CACTGCTCCTTCAAATCCTAGAAT 58.565 41.667 0.00 0.00 0.00 2.40
174 175 4.323792 CCACTGCTCCTTCAAATCCTAGAA 60.324 45.833 0.00 0.00 0.00 2.10
175 176 3.198635 CCACTGCTCCTTCAAATCCTAGA 59.801 47.826 0.00 0.00 0.00 2.43
176 177 3.198635 TCCACTGCTCCTTCAAATCCTAG 59.801 47.826 0.00 0.00 0.00 3.02
177 178 3.055094 GTCCACTGCTCCTTCAAATCCTA 60.055 47.826 0.00 0.00 0.00 2.94
178 179 1.988107 TCCACTGCTCCTTCAAATCCT 59.012 47.619 0.00 0.00 0.00 3.24
179 180 2.087646 GTCCACTGCTCCTTCAAATCC 58.912 52.381 0.00 0.00 0.00 3.01
180 181 2.746362 CAGTCCACTGCTCCTTCAAATC 59.254 50.000 0.00 0.00 37.15 2.17
181 182 2.787994 CAGTCCACTGCTCCTTCAAAT 58.212 47.619 0.00 0.00 37.15 2.32
182 183 2.260844 CAGTCCACTGCTCCTTCAAA 57.739 50.000 0.00 0.00 37.15 2.69
192 193 3.414700 GCGTTCGGCAGTCCACTG 61.415 66.667 2.06 2.06 46.40 3.66
203 204 0.511221 CAATATTAGGGCCGCGTTCG 59.489 55.000 4.92 0.00 0.00 3.95
205 206 1.542547 CCTCAATATTAGGGCCGCGTT 60.543 52.381 4.92 0.00 0.00 4.84
206 207 0.034896 CCTCAATATTAGGGCCGCGT 59.965 55.000 4.92 0.00 0.00 6.01
208 209 2.359900 CATCCTCAATATTAGGGCCGC 58.640 52.381 0.00 0.00 34.66 6.53
209 210 2.571653 TCCATCCTCAATATTAGGGCCG 59.428 50.000 0.00 0.00 34.66 6.13
210 211 4.870021 ATCCATCCTCAATATTAGGGCC 57.130 45.455 0.00 0.00 34.66 5.80
211 212 6.613271 TCTCTATCCATCCTCAATATTAGGGC 59.387 42.308 9.66 0.00 34.66 5.19
212 213 7.843760 AGTCTCTATCCATCCTCAATATTAGGG 59.156 40.741 9.66 5.66 34.66 3.53
213 214 8.837099 AGTCTCTATCCATCCTCAATATTAGG 57.163 38.462 0.00 0.00 35.26 2.69
214 215 9.473007 TGAGTCTCTATCCATCCTCAATATTAG 57.527 37.037 0.65 0.00 0.00 1.73
216 217 8.733092 TTGAGTCTCTATCCATCCTCAATATT 57.267 34.615 0.65 0.00 34.88 1.28
217 218 8.914213 ATTGAGTCTCTATCCATCCTCAATAT 57.086 34.615 10.11 0.00 43.86 1.28
218 219 7.398618 GGATTGAGTCTCTATCCATCCTCAATA 59.601 40.741 28.31 0.00 44.98 1.90
219 220 6.213195 GGATTGAGTCTCTATCCATCCTCAAT 59.787 42.308 28.31 11.30 46.62 2.57
220 221 5.541868 GGATTGAGTCTCTATCCATCCTCAA 59.458 44.000 28.31 0.00 44.58 3.02
222 223 4.157656 CGGATTGAGTCTCTATCCATCCTC 59.842 50.000 30.54 12.36 45.17 3.71
223 224 4.085733 CGGATTGAGTCTCTATCCATCCT 58.914 47.826 30.54 0.00 45.17 3.24
224 225 3.829601 ACGGATTGAGTCTCTATCCATCC 59.170 47.826 30.54 18.15 45.17 3.51
225 226 4.082463 GGACGGATTGAGTCTCTATCCATC 60.082 50.000 30.54 26.98 45.17 3.51
226 227 3.829601 GGACGGATTGAGTCTCTATCCAT 59.170 47.826 30.54 22.35 45.17 3.41
227 228 3.223435 GGACGGATTGAGTCTCTATCCA 58.777 50.000 30.54 0.00 45.17 3.41
228 229 2.559231 GGGACGGATTGAGTCTCTATCC 59.441 54.545 25.26 25.26 42.70 2.59
229 230 2.559231 GGGGACGGATTGAGTCTCTATC 59.441 54.545 13.94 13.94 39.02 2.08
230 231 2.599677 GGGGACGGATTGAGTCTCTAT 58.400 52.381 0.65 0.00 39.02 1.98
231 232 1.411216 GGGGGACGGATTGAGTCTCTA 60.411 57.143 0.65 0.00 39.02 2.43
232 233 0.688087 GGGGGACGGATTGAGTCTCT 60.688 60.000 0.65 0.00 39.02 3.10
237 238 2.190578 GCTGGGGGACGGATTGAG 59.809 66.667 0.00 0.00 0.00 3.02
238 239 2.285368 AGCTGGGGGACGGATTGA 60.285 61.111 0.00 0.00 0.00 2.57
239 240 2.190578 GAGCTGGGGGACGGATTG 59.809 66.667 0.00 0.00 0.00 2.67
241 242 4.095400 AGGAGCTGGGGGACGGAT 62.095 66.667 0.00 0.00 0.00 4.18
242 243 4.779733 GAGGAGCTGGGGGACGGA 62.780 72.222 0.00 0.00 0.00 4.69
246 247 1.694169 GAATGGAGGAGCTGGGGGA 60.694 63.158 0.00 0.00 0.00 4.81
247 248 2.761465 GGAATGGAGGAGCTGGGGG 61.761 68.421 0.00 0.00 0.00 5.40
249 250 1.277580 ACAGGAATGGAGGAGCTGGG 61.278 60.000 0.00 0.00 0.00 4.45
252 253 1.558756 CTCAACAGGAATGGAGGAGCT 59.441 52.381 0.00 0.00 0.00 4.09
253 254 2.016096 GCTCAACAGGAATGGAGGAGC 61.016 57.143 0.00 0.00 39.38 4.70
254 255 1.407989 GGCTCAACAGGAATGGAGGAG 60.408 57.143 0.00 0.00 0.00 3.69
255 256 0.620556 GGCTCAACAGGAATGGAGGA 59.379 55.000 0.00 0.00 0.00 3.71
257 258 3.274288 GTTAGGCTCAACAGGAATGGAG 58.726 50.000 0.00 0.00 0.00 3.86
258 259 2.026262 GGTTAGGCTCAACAGGAATGGA 60.026 50.000 0.00 0.00 0.00 3.41
259 260 2.369394 GGTTAGGCTCAACAGGAATGG 58.631 52.381 0.00 0.00 0.00 3.16
260 261 2.290896 TGGGTTAGGCTCAACAGGAATG 60.291 50.000 0.00 0.00 0.00 2.67
262 263 1.440618 TGGGTTAGGCTCAACAGGAA 58.559 50.000 0.00 0.00 0.00 3.36
263 264 1.440618 TTGGGTTAGGCTCAACAGGA 58.559 50.000 0.00 0.00 31.50 3.86
265 266 2.554032 CTGTTTGGGTTAGGCTCAACAG 59.446 50.000 0.00 0.00 37.28 3.16
266 267 2.582052 CTGTTTGGGTTAGGCTCAACA 58.418 47.619 0.00 0.00 37.28 3.33
267 268 1.886542 CCTGTTTGGGTTAGGCTCAAC 59.113 52.381 0.00 0.00 37.28 3.18
268 269 2.286365 CCTGTTTGGGTTAGGCTCAA 57.714 50.000 0.00 0.00 35.40 3.02
273 274 1.296056 CGTCGCCTGTTTGGGTTAGG 61.296 60.000 0.00 0.00 36.00 2.69
274 275 1.296056 CCGTCGCCTGTTTGGGTTAG 61.296 60.000 0.00 0.00 36.00 2.34
275 276 1.301874 CCGTCGCCTGTTTGGGTTA 60.302 57.895 0.00 0.00 36.00 2.85
276 277 2.593436 CCGTCGCCTGTTTGGGTT 60.593 61.111 0.00 0.00 36.00 4.11
277 278 2.897172 AAACCGTCGCCTGTTTGGGT 62.897 55.000 0.00 0.00 33.64 4.51
279 280 0.593773 CAAAACCGTCGCCTGTTTGG 60.594 55.000 0.00 0.00 35.03 3.28
280 281 0.593773 CCAAAACCGTCGCCTGTTTG 60.594 55.000 0.00 1.54 35.03 2.93
282 283 2.841160 GCCAAAACCGTCGCCTGTT 61.841 57.895 0.00 0.00 0.00 3.16
284 285 4.038080 GGCCAAAACCGTCGCCTG 62.038 66.667 0.00 0.00 38.41 4.85
285 286 3.860930 ATGGCCAAAACCGTCGCCT 62.861 57.895 10.96 0.00 42.15 5.52
286 287 3.336715 GATGGCCAAAACCGTCGCC 62.337 63.158 10.96 0.00 41.99 5.54
289 290 2.696759 CGGGATGGCCAAAACCGTC 61.697 63.158 28.04 14.13 43.85 4.79
290 291 2.675075 CGGGATGGCCAAAACCGT 60.675 61.111 28.04 5.99 39.70 4.83
291 292 4.128388 GCGGGATGGCCAAAACCG 62.128 66.667 30.51 30.51 46.78 4.44
292 293 2.994417 TGCGGGATGGCCAAAACC 60.994 61.111 10.96 14.09 35.15 3.27
293 294 2.261361 GTGCGGGATGGCCAAAAC 59.739 61.111 10.96 4.22 35.15 2.43
294 295 2.117206 AGTGCGGGATGGCCAAAA 59.883 55.556 10.96 0.00 35.15 2.44
297 298 4.408821 GACAGTGCGGGATGGCCA 62.409 66.667 8.56 8.56 35.15 5.36
300 301 4.758251 TGCGACAGTGCGGGATGG 62.758 66.667 8.63 0.00 37.81 3.51
301 302 3.190849 CTGCGACAGTGCGGGATG 61.191 66.667 8.63 0.00 37.59 3.51
306 307 3.771491 GAGTGCTGCGACAGTGCG 61.771 66.667 8.32 0.00 37.81 5.34
307 308 3.418068 GGAGTGCTGCGACAGTGC 61.418 66.667 8.32 0.00 33.43 4.40
314 315 1.221466 TTCAGAAACGGAGTGCTGCG 61.221 55.000 11.37 11.37 45.00 5.18
315 316 1.160137 ATTCAGAAACGGAGTGCTGC 58.840 50.000 0.00 0.00 45.00 5.25
316 317 3.904136 AAATTCAGAAACGGAGTGCTG 57.096 42.857 0.00 0.00 45.00 4.41
317 318 3.882888 TGAAAATTCAGAAACGGAGTGCT 59.117 39.130 0.00 0.00 34.62 4.40
318 319 4.223320 TGAAAATTCAGAAACGGAGTGC 57.777 40.909 0.00 0.00 34.62 4.40
329 330 8.437098 TGCAGTGCAGATGACTGAAAATTCAG 62.437 42.308 15.37 19.02 45.60 3.02
334 335 2.291465 GTGCAGTGCAGATGACTGAAAA 59.709 45.455 20.42 0.00 46.03 2.29
335 336 1.875514 GTGCAGTGCAGATGACTGAAA 59.124 47.619 20.42 0.00 46.03 2.69
336 337 1.516161 GTGCAGTGCAGATGACTGAA 58.484 50.000 20.42 0.00 46.03 3.02
337 338 0.321034 GGTGCAGTGCAGATGACTGA 60.321 55.000 20.42 0.00 46.03 3.41
338 339 0.321387 AGGTGCAGTGCAGATGACTG 60.321 55.000 20.42 0.03 45.91 3.51
339 340 0.321387 CAGGTGCAGTGCAGATGACT 60.321 55.000 20.42 9.10 40.08 3.41
340 341 1.303799 CCAGGTGCAGTGCAGATGAC 61.304 60.000 20.42 6.04 40.08 3.06
341 342 1.002990 CCAGGTGCAGTGCAGATGA 60.003 57.895 20.42 0.00 40.08 2.92
342 343 2.044555 CCCAGGTGCAGTGCAGATG 61.045 63.158 20.42 19.19 40.08 2.90
344 345 1.841103 TACCCAGGTGCAGTGCAGA 60.841 57.895 20.42 0.00 40.08 4.26
345 346 1.672356 GTACCCAGGTGCAGTGCAG 60.672 63.158 20.42 9.05 40.08 4.41
346 347 2.146724 AGTACCCAGGTGCAGTGCA 61.147 57.895 15.37 15.37 35.60 4.57
347 348 1.672356 CAGTACCCAGGTGCAGTGC 60.672 63.158 8.58 8.58 33.14 4.40
348 349 0.108585 AACAGTACCCAGGTGCAGTG 59.891 55.000 7.69 0.66 31.86 3.66
349 350 0.396811 GAACAGTACCCAGGTGCAGT 59.603 55.000 7.69 2.38 32.67 4.40
350 351 0.687354 AGAACAGTACCCAGGTGCAG 59.313 55.000 7.69 1.72 33.14 4.41
351 352 2.018355 TAGAACAGTACCCAGGTGCA 57.982 50.000 7.69 0.00 33.14 4.57
352 353 2.500098 TCATAGAACAGTACCCAGGTGC 59.500 50.000 0.00 0.00 0.00 5.01
353 354 3.430929 GCTCATAGAACAGTACCCAGGTG 60.431 52.174 0.00 0.00 0.00 4.00
355 356 2.766263 TGCTCATAGAACAGTACCCAGG 59.234 50.000 0.00 0.00 0.00 4.45
356 357 3.739519 GCTGCTCATAGAACAGTACCCAG 60.740 52.174 0.00 0.00 33.87 4.45
358 359 2.168521 TGCTGCTCATAGAACAGTACCC 59.831 50.000 0.00 0.00 33.87 3.69
359 360 3.131223 TCTGCTGCTCATAGAACAGTACC 59.869 47.826 0.00 0.00 33.87 3.34
362 363 3.095332 TCTCTGCTGCTCATAGAACAGT 58.905 45.455 0.00 0.00 33.87 3.55
363 364 3.797451 TCTCTGCTGCTCATAGAACAG 57.203 47.619 0.00 0.00 34.48 3.16
364 365 4.442612 GGATTCTCTGCTGCTCATAGAACA 60.443 45.833 0.00 0.00 39.65 3.18
365 366 4.057432 GGATTCTCTGCTGCTCATAGAAC 58.943 47.826 0.00 1.18 39.65 3.01
367 368 3.303049 TGGATTCTCTGCTGCTCATAGA 58.697 45.455 0.00 0.00 0.00 1.98
369 370 2.367894 CCTGGATTCTCTGCTGCTCATA 59.632 50.000 0.00 0.00 0.00 2.15
370 371 1.141254 CCTGGATTCTCTGCTGCTCAT 59.859 52.381 0.00 0.00 0.00 2.90
371 372 0.540454 CCTGGATTCTCTGCTGCTCA 59.460 55.000 0.00 0.00 0.00 4.26
372 373 0.540923 ACCTGGATTCTCTGCTGCTC 59.459 55.000 0.00 0.00 0.00 4.26
373 374 1.871418 TACCTGGATTCTCTGCTGCT 58.129 50.000 0.00 0.00 0.00 4.24
374 375 2.698855 TTACCTGGATTCTCTGCTGC 57.301 50.000 0.00 0.00 0.00 5.25
375 376 4.133078 GGATTTACCTGGATTCTCTGCTG 58.867 47.826 0.00 0.00 35.41 4.41
376 377 3.137360 GGGATTTACCTGGATTCTCTGCT 59.863 47.826 0.00 0.00 38.98 4.24
378 379 5.128919 CAAGGGATTTACCTGGATTCTCTG 58.871 45.833 0.00 0.00 40.87 3.35
379 380 4.166919 CCAAGGGATTTACCTGGATTCTCT 59.833 45.833 0.00 0.00 40.87 3.10
380 381 4.464947 CCAAGGGATTTACCTGGATTCTC 58.535 47.826 0.00 0.00 40.87 2.87
383 384 2.933139 ACCCAAGGGATTTACCTGGATT 59.067 45.455 13.15 0.00 40.87 3.01
384 385 2.514160 GACCCAAGGGATTTACCTGGAT 59.486 50.000 13.15 0.00 40.87 3.41
385 386 1.920351 GACCCAAGGGATTTACCTGGA 59.080 52.381 13.15 0.00 40.87 3.86
386 387 1.063942 GGACCCAAGGGATTTACCTGG 60.064 57.143 13.15 0.00 40.87 4.45
387 388 1.923148 AGGACCCAAGGGATTTACCTG 59.077 52.381 13.15 0.00 40.87 4.00
389 390 4.596354 TTAAGGACCCAAGGGATTTACC 57.404 45.455 13.15 7.00 38.96 2.85
390 391 4.401519 GCTTTAAGGACCCAAGGGATTTAC 59.598 45.833 13.15 0.00 38.96 2.01
391 392 4.293901 AGCTTTAAGGACCCAAGGGATTTA 59.706 41.667 13.15 4.62 38.96 1.40
394 395 2.024941 CAGCTTTAAGGACCCAAGGGAT 60.025 50.000 13.15 0.00 38.96 3.85
396 397 1.354368 TCAGCTTTAAGGACCCAAGGG 59.646 52.381 2.91 2.91 42.03 3.95
397 398 2.619074 CCTCAGCTTTAAGGACCCAAGG 60.619 54.545 0.99 0.00 34.35 3.61
398 399 2.716217 CCTCAGCTTTAAGGACCCAAG 58.284 52.381 0.99 0.00 34.35 3.61
400 401 0.328258 GCCTCAGCTTTAAGGACCCA 59.672 55.000 10.15 0.00 34.35 4.51
401 402 0.328258 TGCCTCAGCTTTAAGGACCC 59.672 55.000 10.15 0.00 40.80 4.46
402 403 2.424956 CAATGCCTCAGCTTTAAGGACC 59.575 50.000 10.15 0.00 40.80 4.46
403 404 2.424956 CCAATGCCTCAGCTTTAAGGAC 59.575 50.000 10.15 3.39 40.80 3.85
405 406 1.135721 GCCAATGCCTCAGCTTTAAGG 59.864 52.381 2.71 2.71 40.80 2.69
406 407 2.097825 AGCCAATGCCTCAGCTTTAAG 58.902 47.619 0.00 0.00 40.80 1.85
409 410 3.062370 AAGCCAATGCCTCAGCTTT 57.938 47.368 0.00 0.00 42.74 3.51
410 411 4.858994 AAGCCAATGCCTCAGCTT 57.141 50.000 0.00 0.00 40.63 3.74
411 412 0.969409 GGAAAGCCAATGCCTCAGCT 60.969 55.000 0.00 0.00 40.80 4.24
413 414 1.553706 AAGGAAAGCCAATGCCTCAG 58.446 50.000 0.00 0.00 38.69 3.35
414 415 1.895131 GAAAGGAAAGCCAATGCCTCA 59.105 47.619 0.00 0.00 38.69 3.86
416 417 1.269958 GGAAAGGAAAGCCAATGCCT 58.730 50.000 0.00 0.00 38.69 4.75
418 419 4.141869 ACATATGGAAAGGAAAGCCAATGC 60.142 41.667 7.80 0.00 34.95 3.56
419 420 5.603170 ACATATGGAAAGGAAAGCCAATG 57.397 39.130 7.80 0.00 34.95 2.82
420 421 6.897413 AGTTACATATGGAAAGGAAAGCCAAT 59.103 34.615 0.72 0.00 34.95 3.16
421 422 6.252995 AGTTACATATGGAAAGGAAAGCCAA 58.747 36.000 0.72 0.00 34.95 4.52
423 424 6.458342 CGAAGTTACATATGGAAAGGAAAGCC 60.458 42.308 0.72 0.00 0.00 4.35
424 425 6.093633 ACGAAGTTACATATGGAAAGGAAAGC 59.906 38.462 0.72 0.00 37.78 3.51
425 426 7.611213 ACGAAGTTACATATGGAAAGGAAAG 57.389 36.000 0.72 0.00 37.78 2.62
446 447 2.178273 CTGGCATGTCGACGACGA 59.822 61.111 22.06 5.75 46.56 4.20
447 448 3.545481 GCTGGCATGTCGACGACG 61.545 66.667 22.06 10.64 34.95 5.12
449 450 2.432456 GTGCTGGCATGTCGACGA 60.432 61.111 11.62 0.00 0.00 4.20
450 451 3.842126 CGTGCTGGCATGTCGACG 61.842 66.667 11.62 2.50 0.00 5.12
451 452 2.738521 ACGTGCTGGCATGTCGAC 60.739 61.111 13.81 9.11 41.83 4.20
456 457 1.779025 GCTATGGACGTGCTGGCATG 61.779 60.000 8.99 12.54 38.78 4.06
457 458 1.524621 GCTATGGACGTGCTGGCAT 60.525 57.895 8.99 0.00 0.00 4.40
458 459 2.125147 GCTATGGACGTGCTGGCA 60.125 61.111 8.99 0.00 0.00 4.92
459 460 2.897350 GGCTATGGACGTGCTGGC 60.897 66.667 8.99 9.52 0.00 4.85
460 461 1.815421 GTGGCTATGGACGTGCTGG 60.815 63.158 8.99 0.00 0.00 4.85
461 462 1.079197 TGTGGCTATGGACGTGCTG 60.079 57.895 8.99 0.00 0.00 4.41
462 463 1.219124 CTGTGGCTATGGACGTGCT 59.781 57.895 8.99 0.00 0.00 4.40
463 464 1.815421 CCTGTGGCTATGGACGTGC 60.815 63.158 0.00 0.00 0.00 5.34
464 465 0.179100 CTCCTGTGGCTATGGACGTG 60.179 60.000 0.00 0.00 0.00 4.49
466 467 1.227380 GCTCCTGTGGCTATGGACG 60.227 63.158 0.00 0.00 0.00 4.79
468 469 1.626356 GGTGCTCCTGTGGCTATGGA 61.626 60.000 0.00 0.00 0.00 3.41
469 470 1.153086 GGTGCTCCTGTGGCTATGG 60.153 63.158 0.00 0.00 0.00 2.74
470 471 0.254178 AAGGTGCTCCTGTGGCTATG 59.746 55.000 8.37 0.00 44.35 2.23
472 473 0.835971 TGAAGGTGCTCCTGTGGCTA 60.836 55.000 8.37 0.00 44.35 3.93
473 474 2.121992 CTGAAGGTGCTCCTGTGGCT 62.122 60.000 8.37 0.00 44.35 4.75
474 475 1.673665 CTGAAGGTGCTCCTGTGGC 60.674 63.158 8.37 0.00 44.35 5.01
475 476 0.976641 TACTGAAGGTGCTCCTGTGG 59.023 55.000 8.37 4.08 44.35 4.17
478 479 2.693069 CAACTACTGAAGGTGCTCCTG 58.307 52.381 8.37 0.00 44.35 3.86
484 485 4.389992 CAGTGTATGCAACTACTGAAGGTG 59.610 45.833 17.64 0.00 46.55 4.00
485 486 4.040461 ACAGTGTATGCAACTACTGAAGGT 59.960 41.667 25.05 8.02 38.47 3.50
486 487 4.389992 CACAGTGTATGCAACTACTGAAGG 59.610 45.833 25.05 14.51 38.47 3.46
487 488 4.143030 GCACAGTGTATGCAACTACTGAAG 60.143 45.833 25.05 19.06 42.88 3.02
488 489 3.745975 GCACAGTGTATGCAACTACTGAA 59.254 43.478 25.05 0.00 42.88 3.02
491 492 2.303022 AGGCACAGTGTATGCAACTACT 59.697 45.455 7.89 0.00 45.27 2.57
492 493 2.673368 GAGGCACAGTGTATGCAACTAC 59.327 50.000 7.89 0.00 45.27 2.73
493 494 2.567169 AGAGGCACAGTGTATGCAACTA 59.433 45.455 7.89 0.00 45.27 2.24
494 495 1.349026 AGAGGCACAGTGTATGCAACT 59.651 47.619 7.89 3.80 45.27 3.16
496 497 2.301583 TGTAGAGGCACAGTGTATGCAA 59.698 45.455 7.89 0.00 45.27 4.08
497 498 1.899142 TGTAGAGGCACAGTGTATGCA 59.101 47.619 7.89 0.00 45.27 3.96
498 499 2.271800 GTGTAGAGGCACAGTGTATGC 58.728 52.381 1.61 0.00 42.62 3.14
499 500 3.592898 TGTGTAGAGGCACAGTGTATG 57.407 47.619 1.61 0.00 43.54 2.39
509 510 2.898705 CACAGGAAGATGTGTAGAGGC 58.101 52.381 0.00 0.00 44.49 4.70
517 518 0.326264 GGAGGTGCACAGGAAGATGT 59.674 55.000 20.43 0.00 0.00 3.06
518 519 0.742281 CGGAGGTGCACAGGAAGATG 60.742 60.000 20.43 0.00 0.00 2.90
519 520 1.599047 CGGAGGTGCACAGGAAGAT 59.401 57.895 20.43 0.00 0.00 2.40
534 535 2.781431 TACACTCTGCTGCCTCCGGA 62.781 60.000 2.93 2.93 0.00 5.14
535 536 1.888436 TTACACTCTGCTGCCTCCGG 61.888 60.000 0.00 0.00 0.00 5.14
536 537 0.037326 TTTACACTCTGCTGCCTCCG 60.037 55.000 0.00 0.00 0.00 4.63
537 538 1.443802 GTTTACACTCTGCTGCCTCC 58.556 55.000 0.00 0.00 0.00 4.30
538 539 1.071605 CGTTTACACTCTGCTGCCTC 58.928 55.000 0.00 0.00 0.00 4.70
539 540 0.393077 ACGTTTACACTCTGCTGCCT 59.607 50.000 0.00 0.00 0.00 4.75
540 541 0.512952 CACGTTTACACTCTGCTGCC 59.487 55.000 0.00 0.00 0.00 4.85
541 542 0.512952 CCACGTTTACACTCTGCTGC 59.487 55.000 0.00 0.00 0.00 5.25
542 543 0.512952 GCCACGTTTACACTCTGCTG 59.487 55.000 0.00 0.00 0.00 4.41
543 544 0.105964 TGCCACGTTTACACTCTGCT 59.894 50.000 0.00 0.00 0.00 4.24
544 545 0.941542 TTGCCACGTTTACACTCTGC 59.058 50.000 0.00 0.00 0.00 4.26
584 3552 3.067320 GTCTTTCAGTCTTTGCCTTTGCT 59.933 43.478 0.00 0.00 38.71 3.91
591 3559 3.944422 TTCGTGTCTTTCAGTCTTTGC 57.056 42.857 0.00 0.00 0.00 3.68
592 3560 4.260784 CCCTTTCGTGTCTTTCAGTCTTTG 60.261 45.833 0.00 0.00 0.00 2.77
593 3561 3.877508 CCCTTTCGTGTCTTTCAGTCTTT 59.122 43.478 0.00 0.00 0.00 2.52
594 3562 3.134081 TCCCTTTCGTGTCTTTCAGTCTT 59.866 43.478 0.00 0.00 0.00 3.01
595 3563 2.698797 TCCCTTTCGTGTCTTTCAGTCT 59.301 45.455 0.00 0.00 0.00 3.24
596 3564 2.801111 GTCCCTTTCGTGTCTTTCAGTC 59.199 50.000 0.00 0.00 0.00 3.51
597 3565 2.484947 GGTCCCTTTCGTGTCTTTCAGT 60.485 50.000 0.00 0.00 0.00 3.41
598 3566 2.143925 GGTCCCTTTCGTGTCTTTCAG 58.856 52.381 0.00 0.00 0.00 3.02
599 3567 1.766496 AGGTCCCTTTCGTGTCTTTCA 59.234 47.619 0.00 0.00 0.00 2.69
600 3568 2.545537 AGGTCCCTTTCGTGTCTTTC 57.454 50.000 0.00 0.00 0.00 2.62
601 3569 2.486727 GGAAGGTCCCTTTCGTGTCTTT 60.487 50.000 0.00 0.00 36.26 2.52
602 3570 1.071857 GGAAGGTCCCTTTCGTGTCTT 59.928 52.381 0.00 0.00 36.26 3.01
603 3571 0.685660 GGAAGGTCCCTTTCGTGTCT 59.314 55.000 0.00 0.00 36.26 3.41
604 3572 0.395312 TGGAAGGTCCCTTTCGTGTC 59.605 55.000 0.00 0.00 35.03 3.67
605 3573 0.841289 TTGGAAGGTCCCTTTCGTGT 59.159 50.000 0.00 0.00 35.03 4.49
614 3582 2.194201 TGGTTCGATTTGGAAGGTCC 57.806 50.000 0.00 0.00 36.96 4.46
632 3600 2.873649 GCTCTCCTCTCCTTGGTTGTTG 60.874 54.545 0.00 0.00 0.00 3.33
634 3602 0.980423 GCTCTCCTCTCCTTGGTTGT 59.020 55.000 0.00 0.00 0.00 3.32
638 3606 0.540923 CTTGGCTCTCCTCTCCTTGG 59.459 60.000 0.00 0.00 0.00 3.61
639 3607 1.274712 ACTTGGCTCTCCTCTCCTTG 58.725 55.000 0.00 0.00 0.00 3.61
640 3608 2.037385 AACTTGGCTCTCCTCTCCTT 57.963 50.000 0.00 0.00 0.00 3.36
641 3609 1.905894 GAAACTTGGCTCTCCTCTCCT 59.094 52.381 0.00 0.00 0.00 3.69
642 3610 1.625818 TGAAACTTGGCTCTCCTCTCC 59.374 52.381 0.00 0.00 0.00 3.71
643 3611 2.694213 GTGAAACTTGGCTCTCCTCTC 58.306 52.381 0.00 0.00 0.00 3.20
644 3612 2.849294 GTGAAACTTGGCTCTCCTCT 57.151 50.000 0.00 0.00 0.00 3.69
664 3632 0.953727 TTCCTCGTCTCGTTTTCCGA 59.046 50.000 0.00 0.00 45.00 4.55
665 3633 1.719780 CTTTCCTCGTCTCGTTTTCCG 59.280 52.381 0.00 0.00 38.13 4.30
666 3634 1.459975 GCTTTCCTCGTCTCGTTTTCC 59.540 52.381 0.00 0.00 0.00 3.13
667 3635 1.124477 CGCTTTCCTCGTCTCGTTTTC 59.876 52.381 0.00 0.00 0.00 2.29
668 3636 1.137513 CGCTTTCCTCGTCTCGTTTT 58.862 50.000 0.00 0.00 0.00 2.43
669 3637 0.313043 TCGCTTTCCTCGTCTCGTTT 59.687 50.000 0.00 0.00 0.00 3.60
670 3638 0.313043 TTCGCTTTCCTCGTCTCGTT 59.687 50.000 0.00 0.00 0.00 3.85
671 3639 0.313043 TTTCGCTTTCCTCGTCTCGT 59.687 50.000 0.00 0.00 0.00 4.18
672 3640 1.584308 GATTTCGCTTTCCTCGTCTCG 59.416 52.381 0.00 0.00 0.00 4.04
673 3641 2.600867 CTGATTTCGCTTTCCTCGTCTC 59.399 50.000 0.00 0.00 0.00 3.36
674 3642 2.611518 CTGATTTCGCTTTCCTCGTCT 58.388 47.619 0.00 0.00 0.00 4.18
675 3643 1.061276 GCTGATTTCGCTTTCCTCGTC 59.939 52.381 0.00 0.00 0.00 4.20
676 3644 1.079503 GCTGATTTCGCTTTCCTCGT 58.920 50.000 0.00 0.00 0.00 4.18
677 3645 1.061711 CTGCTGATTTCGCTTTCCTCG 59.938 52.381 0.00 0.00 0.00 4.63
680 3648 1.202121 GCTCTGCTGATTTCGCTTTCC 60.202 52.381 0.00 0.00 0.00 3.13
685 3653 0.523072 TTTGGCTCTGCTGATTTCGC 59.477 50.000 0.00 0.00 0.00 4.70
699 3667 5.859495 AGGTAGTATCTAGAAGCATTTGGC 58.141 41.667 0.00 0.00 45.30 4.52
700 3668 8.184304 AGTAGGTAGTATCTAGAAGCATTTGG 57.816 38.462 0.00 0.00 0.00 3.28
703 3671 9.509956 CTGTAGTAGGTAGTATCTAGAAGCATT 57.490 37.037 0.00 0.00 0.00 3.56
705 3673 8.032045 ACTGTAGTAGGTAGTATCTAGAAGCA 57.968 38.462 0.00 0.00 0.00 3.91
706 3674 7.329226 CGACTGTAGTAGGTAGTATCTAGAAGC 59.671 44.444 0.00 0.00 0.00 3.86
708 3676 8.243961 ACGACTGTAGTAGGTAGTATCTAGAA 57.756 38.462 0.00 0.00 0.00 2.10
709 3677 7.831691 ACGACTGTAGTAGGTAGTATCTAGA 57.168 40.000 0.00 0.00 0.00 2.43
710 3678 7.325821 CGAACGACTGTAGTAGGTAGTATCTAG 59.674 44.444 0.00 0.00 0.00 2.43
711 3679 7.142021 CGAACGACTGTAGTAGGTAGTATCTA 58.858 42.308 0.00 0.00 0.00 1.98
712 3680 5.982516 CGAACGACTGTAGTAGGTAGTATCT 59.017 44.000 0.00 0.00 0.00 1.98
713 3681 5.176590 CCGAACGACTGTAGTAGGTAGTATC 59.823 48.000 0.00 0.00 0.00 2.24
714 3682 5.053145 CCGAACGACTGTAGTAGGTAGTAT 58.947 45.833 0.00 0.00 0.00 2.12
715 3683 4.081642 ACCGAACGACTGTAGTAGGTAGTA 60.082 45.833 15.57 0.00 33.22 1.82
716 3684 3.265791 CCGAACGACTGTAGTAGGTAGT 58.734 50.000 0.00 0.00 0.00 2.73
717 3685 3.265791 ACCGAACGACTGTAGTAGGTAG 58.734 50.000 15.57 0.00 33.22 3.18
718 3686 3.262420 GACCGAACGACTGTAGTAGGTA 58.738 50.000 16.59 0.00 34.47 3.08
719 3687 2.079925 GACCGAACGACTGTAGTAGGT 58.920 52.381 16.58 16.58 36.13 3.08
720 3688 1.399791 GGACCGAACGACTGTAGTAGG 59.600 57.143 11.76 11.76 0.00 3.18
721 3689 2.079158 TGGACCGAACGACTGTAGTAG 58.921 52.381 0.00 0.00 0.00 2.57
722 3690 2.183478 TGGACCGAACGACTGTAGTA 57.817 50.000 0.00 0.00 0.00 1.82
723 3691 1.000938 GTTGGACCGAACGACTGTAGT 60.001 52.381 0.00 0.00 0.00 2.73
724 3692 1.694639 GTTGGACCGAACGACTGTAG 58.305 55.000 0.00 0.00 0.00 2.74
725 3693 3.871775 GTTGGACCGAACGACTGTA 57.128 52.632 0.00 0.00 0.00 2.74
726 3694 4.744316 GTTGGACCGAACGACTGT 57.256 55.556 0.00 0.00 0.00 3.55
731 3699 1.804326 CTAGCCGTTGGACCGAACG 60.804 63.158 17.18 17.18 46.62 3.95
748 3716 0.895530 TTCTTCCGTCGCTTCCATCT 59.104 50.000 0.00 0.00 0.00 2.90
794 3771 3.258123 GGCAGGAAAAAGGAATTGCAGTA 59.742 43.478 0.00 0.00 0.00 2.74
801 3778 1.545841 GACGGGCAGGAAAAAGGAAT 58.454 50.000 0.00 0.00 0.00 3.01
814 3801 2.124695 GACAAGGATGGGACGGGC 60.125 66.667 0.00 0.00 0.00 6.13
840 3827 3.055021 GGTGGTAGGAGGGAAGAAGAAAG 60.055 52.174 0.00 0.00 0.00 2.62
841 3828 2.910977 GGTGGTAGGAGGGAAGAAGAAA 59.089 50.000 0.00 0.00 0.00 2.52
842 3829 2.547990 GGTGGTAGGAGGGAAGAAGAA 58.452 52.381 0.00 0.00 0.00 2.52
843 3830 1.273666 GGGTGGTAGGAGGGAAGAAGA 60.274 57.143 0.00 0.00 0.00 2.87
844 3831 1.205055 GGGTGGTAGGAGGGAAGAAG 58.795 60.000 0.00 0.00 0.00 2.85
905 3894 0.179056 ACATATGTAGTGGTGGCGGC 60.179 55.000 6.56 0.00 0.00 6.53
946 3942 2.613977 GCGGATGATGGGAGATCGATTT 60.614 50.000 0.00 0.00 0.00 2.17
951 3947 1.298014 GGGCGGATGATGGGAGATC 59.702 63.158 0.00 0.00 0.00 2.75
966 3962 2.025887 TCAGGAAGAAGGAAGAATGGGC 60.026 50.000 0.00 0.00 0.00 5.36
967 3963 3.883669 CTCAGGAAGAAGGAAGAATGGG 58.116 50.000 0.00 0.00 0.00 4.00
983 3982 1.088340 CATGGACGCTTCAGCTCAGG 61.088 60.000 0.00 0.00 39.32 3.86
1073 4075 0.384669 GTAGTAGTAGGGTGCCAGCG 59.615 60.000 0.00 0.00 0.00 5.18
1078 4080 3.802866 ACGAGTAGTAGTAGTAGGGTGC 58.197 50.000 0.00 0.00 0.00 5.01
1079 4081 5.016051 TGACGAGTAGTAGTAGTAGGGTG 57.984 47.826 0.00 0.00 0.00 4.61
1080 4082 5.508825 CGATGACGAGTAGTAGTAGTAGGGT 60.509 48.000 0.00 0.00 42.66 4.34
1083 4085 6.437928 AGACGATGACGAGTAGTAGTAGTAG 58.562 44.000 0.00 0.00 42.66 2.57
1084 4086 6.384258 AGACGATGACGAGTAGTAGTAGTA 57.616 41.667 0.00 0.00 42.66 1.82
1085 4087 5.261209 AGACGATGACGAGTAGTAGTAGT 57.739 43.478 0.00 0.00 42.66 2.73
1086 4088 5.978919 AGAAGACGATGACGAGTAGTAGTAG 59.021 44.000 0.00 0.00 42.66 2.57
1087 4089 5.900425 AGAAGACGATGACGAGTAGTAGTA 58.100 41.667 0.00 0.00 42.66 1.82
1088 4090 4.757594 AGAAGACGATGACGAGTAGTAGT 58.242 43.478 0.00 0.00 42.66 2.73
1089 4091 4.209703 GGAGAAGACGATGACGAGTAGTAG 59.790 50.000 0.00 0.00 42.66 2.57
1097 4117 1.586564 GCCGGAGAAGACGATGACG 60.587 63.158 5.05 0.00 45.75 4.35
1098 4118 1.586564 CGCCGGAGAAGACGATGAC 60.587 63.158 5.05 0.00 0.00 3.06
1267 4296 3.462678 GGTGGAGGAGTCGGAGGC 61.463 72.222 0.00 0.00 0.00 4.70
1276 4305 2.204090 GGAGTTGGGGGTGGAGGA 60.204 66.667 0.00 0.00 0.00 3.71
1277 4306 3.717294 CGGAGTTGGGGGTGGAGG 61.717 72.222 0.00 0.00 0.00 4.30
1278 4307 3.717294 CCGGAGTTGGGGGTGGAG 61.717 72.222 0.00 0.00 0.00 3.86
1670 4714 2.041405 CCACCTCCTCCCCTCTCC 60.041 72.222 0.00 0.00 0.00 3.71
1675 4719 2.073101 GGATGACCACCTCCTCCCC 61.073 68.421 0.00 0.00 35.97 4.81
1677 4721 1.341156 CCTGGATGACCACCTCCTCC 61.341 65.000 0.00 0.00 41.77 4.30
1722 4769 1.222115 GCGGTGTCAGTGTGTCTTCC 61.222 60.000 0.00 0.00 0.00 3.46
1774 4821 2.825836 CCCATGGAAGCGAGTGCC 60.826 66.667 15.22 0.00 44.31 5.01
1882 4933 4.630111 TGAATCTTTCAAGCGGCAAAATT 58.370 34.783 1.45 0.00 36.59 1.82
1883 4934 4.255833 TGAATCTTTCAAGCGGCAAAAT 57.744 36.364 1.45 0.00 36.59 1.82
1908 4988 6.491383 ACCTGTGACACCTTAGAACTATCTA 58.509 40.000 2.45 0.00 37.10 1.98
2166 5392 4.330944 TCGCTTACCTCTGAAGTTTCAA 57.669 40.909 0.00 0.00 36.64 2.69
2181 5407 4.690748 CACTTCATGTCCTTCTTTCGCTTA 59.309 41.667 0.00 0.00 0.00 3.09
2186 5412 5.411053 CCTTCTCACTTCATGTCCTTCTTTC 59.589 44.000 0.00 0.00 0.00 2.62
2218 5444 1.078848 CGAAGGGCCAGAACTCCAG 60.079 63.158 6.18 0.00 0.00 3.86
2219 5445 1.535444 TCGAAGGGCCAGAACTCCA 60.535 57.895 6.18 0.00 0.00 3.86
2235 5466 1.043816 AGGATATCACAGTGGGCTCG 58.956 55.000 4.83 0.00 0.00 5.03
2240 5471 5.011431 TGCTAAGATCAGGATATCACAGTGG 59.989 44.000 4.83 0.00 0.00 4.00
2363 5613 5.127491 AGTCCAAGAAATCAACGTTTGGTA 58.873 37.500 11.57 0.00 39.39 3.25
2422 5760 7.086685 TGAACTATTGGGTTAGGAGTTTTCT 57.913 36.000 0.00 0.00 30.66 2.52
2483 5822 8.397575 TCTGCAGTCTATCTAAAGTAATCGAT 57.602 34.615 14.67 0.00 0.00 3.59
2595 5969 5.921408 AGTTCACGTCATGTACTCTTTTCTC 59.079 40.000 0.00 0.00 33.99 2.87
2609 5983 5.120399 ACAGTAATTTGGAAGTTCACGTCA 58.880 37.500 5.01 0.00 0.00 4.35
2618 5992 4.024048 AGTCGCACAACAGTAATTTGGAAG 60.024 41.667 0.00 0.00 0.00 3.46
2653 6027 2.897326 TCAGGAACAGGAAGTCGATTCA 59.103 45.455 0.00 0.00 39.91 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.