Multiple sequence alignment - TraesCS6D01G381100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G381100 chr6D 100.000 5784 0 0 1 5784 461652241 461658024 0.000000e+00 10682.0
1 TraesCS6D01G381100 chr6D 85.592 1166 156 12 4624 5783 448638280 448639439 0.000000e+00 1212.0
2 TraesCS6D01G381100 chr6D 76.990 1030 187 27 2029 3039 471189140 471190138 1.420000e-150 544.0
3 TraesCS6D01G381100 chr6D 81.361 676 110 13 1284 1950 471185864 471186532 2.370000e-148 536.0
4 TraesCS6D01G381100 chr6D 87.755 294 28 8 3824 4111 437169822 437169531 2.580000e-88 337.0
5 TraesCS6D01G381100 chr6D 80.362 387 56 15 885 1267 471179630 471180000 5.710000e-70 276.0
6 TraesCS6D01G381100 chr6D 79.609 358 64 6 2282 2632 471302189 471302544 1.240000e-61 248.0
7 TraesCS6D01G381100 chr6D 87.500 184 23 0 2853 3036 471302775 471302958 4.540000e-51 213.0
8 TraesCS6D01G381100 chr6D 82.946 129 15 4 519 640 471307378 471307506 6.130000e-20 110.0
9 TraesCS6D01G381100 chr6D 96.364 55 2 0 3770 3824 461655699 461655753 2.220000e-14 91.6
10 TraesCS6D01G381100 chr6D 79.231 130 16 6 640 758 471308186 471308315 4.800000e-11 80.5
11 TraesCS6D01G381100 chr6D 97.368 38 1 0 1250 1287 471180000 471180037 1.350000e-06 65.8
12 TraesCS6D01G381100 chr6A 95.779 2535 75 7 539 3050 608367105 608369630 0.000000e+00 4060.0
13 TraesCS6D01G381100 chr6A 95.140 535 20 4 1 534 608366261 608366790 0.000000e+00 839.0
14 TraesCS6D01G381100 chr6A 79.439 1070 158 29 924 1950 616233763 616234813 0.000000e+00 701.0
15 TraesCS6D01G381100 chr6A 78.339 891 153 27 2169 3039 616237075 616237945 1.830000e-149 540.0
16 TraesCS6D01G381100 chr6B 94.944 1345 63 3 1475 2818 703782530 703783870 0.000000e+00 2102.0
17 TraesCS6D01G381100 chr6B 84.370 1190 136 31 796 1951 719300051 719298878 0.000000e+00 1122.0
18 TraesCS6D01G381100 chr6B 88.458 953 40 15 554 1482 703780701 703781607 0.000000e+00 1086.0
19 TraesCS6D01G381100 chr6B 90.884 735 54 9 3050 3774 156566038 156565307 0.000000e+00 974.0
20 TraesCS6D01G381100 chr6B 79.942 1027 160 29 2030 3045 719331369 719330378 0.000000e+00 713.0
21 TraesCS6D01G381100 chr6B 84.344 709 103 7 1249 1953 719332189 719331485 0.000000e+00 688.0
22 TraesCS6D01G381100 chr6B 78.611 1080 161 35 929 1950 675497958 675499025 0.000000e+00 651.0
23 TraesCS6D01G381100 chr6B 88.822 501 50 4 2555 3050 703441474 703440975 1.380000e-170 610.0
24 TraesCS6D01G381100 chr6B 76.997 1039 169 40 2029 3039 675499149 675500145 1.100000e-146 531.0
25 TraesCS6D01G381100 chr6B 82.561 453 60 15 3665 4111 156565343 156564904 1.180000e-101 381.0
26 TraesCS6D01G381100 chr6B 86.301 292 35 5 3826 4112 644845813 644846104 4.350000e-81 313.0
27 TraesCS6D01G381100 chr6B 95.855 193 8 0 2858 3050 703783866 703784058 4.350000e-81 313.0
28 TraesCS6D01G381100 chr6B 87.815 238 29 0 2808 3045 719298111 719297874 4.410000e-71 279.0
29 TraesCS6D01G381100 chr6B 89.423 104 4 4 208 308 703780544 703780643 2.190000e-24 124.0
30 TraesCS6D01G381100 chr6B 98.182 55 1 0 3770 3824 156565621 156565567 4.770000e-16 97.1
31 TraesCS6D01G381100 chr2D 95.216 1066 11 5 3051 4108 48176283 48177316 0.000000e+00 1650.0
32 TraesCS6D01G381100 chr2D 92.674 1092 34 14 3051 4112 638306349 638307424 0.000000e+00 1531.0
33 TraesCS6D01G381100 chr2D 92.871 1066 32 15 3051 4111 403480412 403481438 0.000000e+00 1507.0
34 TraesCS6D01G381100 chr2D 91.682 1070 52 18 3051 4110 83852749 83851707 0.000000e+00 1448.0
35 TraesCS6D01G381100 chr2D 83.562 219 35 1 1 218 572809272 572809490 2.730000e-48 204.0
36 TraesCS6D01G381100 chr2D 98.276 58 1 0 3770 3827 83852313 83852256 1.030000e-17 102.0
37 TraesCS6D01G381100 chr2D 96.364 55 2 0 3770 3824 48176679 48176733 2.220000e-14 91.6
38 TraesCS6D01G381100 chr2D 96.364 55 2 0 3770 3824 403480809 403480863 2.220000e-14 91.6
39 TraesCS6D01G381100 chr2D 93.103 58 4 0 3770 3827 83852341 83852284 1.030000e-12 86.1
40 TraesCS6D01G381100 chr3D 89.832 1190 114 7 4599 5784 501436741 501437927 0.000000e+00 1520.0
41 TraesCS6D01G381100 chr3D 89.011 273 23 7 3843 4111 442982009 442981740 1.200000e-86 331.0
42 TraesCS6D01G381100 chr4D 89.673 1191 108 8 4598 5784 360491010 360489831 0.000000e+00 1504.0
43 TraesCS6D01G381100 chr4D 85.518 1167 157 12 4624 5784 28248380 28249540 0.000000e+00 1208.0
44 TraesCS6D01G381100 chr7B 90.575 1114 102 3 4609 5721 568769508 568768397 0.000000e+00 1472.0
45 TraesCS6D01G381100 chr7B 87.805 205 24 1 316 520 561904133 561903930 7.490000e-59 239.0
46 TraesCS6D01G381100 chr4A 89.777 1076 78 17 3051 4111 733354670 733353612 0.000000e+00 1349.0
47 TraesCS6D01G381100 chr4A 88.149 1097 93 10 3050 4111 717726808 717725714 0.000000e+00 1271.0
48 TraesCS6D01G381100 chr5A 86.527 1195 150 11 4596 5784 341681683 341680494 0.000000e+00 1304.0
49 TraesCS6D01G381100 chr5B 88.616 1098 88 12 3051 4113 281370153 281369058 0.000000e+00 1301.0
50 TraesCS6D01G381100 chr5B 87.558 1077 116 15 4711 5782 571594957 571593894 0.000000e+00 1230.0
51 TraesCS6D01G381100 chr3A 86.013 1194 153 13 4597 5784 728930695 728929510 0.000000e+00 1267.0
52 TraesCS6D01G381100 chr2B 86.885 1098 93 16 3050 4111 756550966 756552048 0.000000e+00 1182.0
53 TraesCS6D01G381100 chr4B 86.722 1077 126 14 4711 5782 114583460 114582396 0.000000e+00 1181.0
54 TraesCS6D01G381100 chr3B 91.436 724 59 3 3051 3773 452700954 452700233 0.000000e+00 990.0
55 TraesCS6D01G381100 chr3B 70.950 716 168 31 1249 1938 751823971 751824672 3.640000e-27 134.0
56 TraesCS6D01G381100 chr7A 87.714 700 86 0 1249 1948 48938912 48939611 0.000000e+00 817.0
57 TraesCS6D01G381100 chr7A 87.697 699 86 0 1250 1948 48953002 48952304 0.000000e+00 815.0
58 TraesCS6D01G381100 chr7A 78.089 1036 167 32 2046 3049 48939765 48940772 8.290000e-168 601.0
59 TraesCS6D01G381100 chr7A 79.412 816 138 19 2258 3049 48951978 48951169 3.050000e-152 549.0
60 TraesCS6D01G381100 chrUn 87.745 204 25 0 317 520 365469683 365469886 7.490000e-59 239.0
61 TraesCS6D01G381100 chrUn 87.745 204 25 0 317 520 365471175 365471378 7.490000e-59 239.0
62 TraesCS6D01G381100 chr1D 87.745 204 25 0 317 520 198995389 198995186 7.490000e-59 239.0
63 TraesCS6D01G381100 chr1D 87.745 204 25 0 317 520 198996881 198996678 7.490000e-59 239.0
64 TraesCS6D01G381100 chr1D 87.745 204 25 0 317 520 198998373 198998170 7.490000e-59 239.0
65 TraesCS6D01G381100 chr1D 87.745 204 25 0 317 520 198999865 198999662 7.490000e-59 239.0
66 TraesCS6D01G381100 chr1D 87.745 204 25 0 317 520 199001357 199001154 7.490000e-59 239.0
67 TraesCS6D01G381100 chr1D 70.795 969 206 50 1034 1947 28226232 28225286 3.610000e-32 150.0
68 TraesCS6D01G381100 chr1D 96.552 58 2 0 3770 3827 363855549 363855492 4.770000e-16 97.1
69 TraesCS6D01G381100 chr2A 81.604 212 38 1 8 218 712100431 712100642 2.140000e-39 174.0
70 TraesCS6D01G381100 chr1B 87.248 149 18 1 61 209 530994325 530994178 9.970000e-38 169.0
71 TraesCS6D01G381100 chr5D 92.727 55 4 0 3770 3824 485356349 485356403 4.800000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G381100 chr6D 461652241 461658024 5783 False 5386.800000 10682 98.182000 1 5784 2 chr6D.!!$F2 5783
1 TraesCS6D01G381100 chr6D 448638280 448639439 1159 False 1212.000000 1212 85.592000 4624 5783 1 chr6D.!!$F1 1159
2 TraesCS6D01G381100 chr6D 471185864 471190138 4274 False 540.000000 544 79.175500 1284 3039 2 chr6D.!!$F4 1755
3 TraesCS6D01G381100 chr6D 471302189 471302958 769 False 230.500000 248 83.554500 2282 3036 2 chr6D.!!$F5 754
4 TraesCS6D01G381100 chr6A 608366261 608369630 3369 False 2449.500000 4060 95.459500 1 3050 2 chr6A.!!$F1 3049
5 TraesCS6D01G381100 chr6A 616233763 616237945 4182 False 620.500000 701 78.889000 924 3039 2 chr6A.!!$F2 2115
6 TraesCS6D01G381100 chr6B 703780544 703784058 3514 False 906.250000 2102 92.170000 208 3050 4 chr6B.!!$F3 2842
7 TraesCS6D01G381100 chr6B 719297874 719300051 2177 True 700.500000 1122 86.092500 796 3045 2 chr6B.!!$R3 2249
8 TraesCS6D01G381100 chr6B 719330378 719332189 1811 True 700.500000 713 82.143000 1249 3045 2 chr6B.!!$R4 1796
9 TraesCS6D01G381100 chr6B 675497958 675500145 2187 False 591.000000 651 77.804000 929 3039 2 chr6B.!!$F2 2110
10 TraesCS6D01G381100 chr6B 156564904 156566038 1134 True 484.033333 974 90.542333 3050 4111 3 chr6B.!!$R2 1061
11 TraesCS6D01G381100 chr2D 638306349 638307424 1075 False 1531.000000 1531 92.674000 3051 4112 1 chr2D.!!$F2 1061
12 TraesCS6D01G381100 chr2D 48176283 48177316 1033 False 870.800000 1650 95.790000 3051 4108 2 chr2D.!!$F3 1057
13 TraesCS6D01G381100 chr2D 403480412 403481438 1026 False 799.300000 1507 94.617500 3051 4111 2 chr2D.!!$F4 1060
14 TraesCS6D01G381100 chr2D 83851707 83852749 1042 True 545.366667 1448 94.353667 3051 4110 3 chr2D.!!$R1 1059
15 TraesCS6D01G381100 chr3D 501436741 501437927 1186 False 1520.000000 1520 89.832000 4599 5784 1 chr3D.!!$F1 1185
16 TraesCS6D01G381100 chr4D 360489831 360491010 1179 True 1504.000000 1504 89.673000 4598 5784 1 chr4D.!!$R1 1186
17 TraesCS6D01G381100 chr4D 28248380 28249540 1160 False 1208.000000 1208 85.518000 4624 5784 1 chr4D.!!$F1 1160
18 TraesCS6D01G381100 chr7B 568768397 568769508 1111 True 1472.000000 1472 90.575000 4609 5721 1 chr7B.!!$R2 1112
19 TraesCS6D01G381100 chr4A 733353612 733354670 1058 True 1349.000000 1349 89.777000 3051 4111 1 chr4A.!!$R2 1060
20 TraesCS6D01G381100 chr4A 717725714 717726808 1094 True 1271.000000 1271 88.149000 3050 4111 1 chr4A.!!$R1 1061
21 TraesCS6D01G381100 chr5A 341680494 341681683 1189 True 1304.000000 1304 86.527000 4596 5784 1 chr5A.!!$R1 1188
22 TraesCS6D01G381100 chr5B 281369058 281370153 1095 True 1301.000000 1301 88.616000 3051 4113 1 chr5B.!!$R1 1062
23 TraesCS6D01G381100 chr5B 571593894 571594957 1063 True 1230.000000 1230 87.558000 4711 5782 1 chr5B.!!$R2 1071
24 TraesCS6D01G381100 chr3A 728929510 728930695 1185 True 1267.000000 1267 86.013000 4597 5784 1 chr3A.!!$R1 1187
25 TraesCS6D01G381100 chr2B 756550966 756552048 1082 False 1182.000000 1182 86.885000 3050 4111 1 chr2B.!!$F1 1061
26 TraesCS6D01G381100 chr4B 114582396 114583460 1064 True 1181.000000 1181 86.722000 4711 5782 1 chr4B.!!$R1 1071
27 TraesCS6D01G381100 chr3B 452700233 452700954 721 True 990.000000 990 91.436000 3051 3773 1 chr3B.!!$R1 722
28 TraesCS6D01G381100 chr7A 48938912 48940772 1860 False 709.000000 817 82.901500 1249 3049 2 chr7A.!!$F1 1800
29 TraesCS6D01G381100 chr7A 48951169 48953002 1833 True 682.000000 815 83.554500 1250 3049 2 chr7A.!!$R1 1799
30 TraesCS6D01G381100 chrUn 365469683 365471378 1695 False 239.000000 239 87.745000 317 520 2 chrUn.!!$F1 203
31 TraesCS6D01G381100 chr1D 198995186 199001357 6171 True 239.000000 239 87.745000 317 520 5 chr1D.!!$R3 203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
576 5545 0.748005 GCATGACCGTGGCTGGTTAT 60.748 55.0 0.0 2.63 44.01 1.89 F
1659 7630 0.398318 GCAGGAGGTATGTCCCATCC 59.602 60.0 0.0 0.00 37.31 3.51 F
2385 12986 0.881118 TTGAAAGCAACCTCATCGCC 59.119 50.0 0.0 0.00 0.00 5.54 F
4148 15008 1.739067 AGCCAATAAACTGACGAGCC 58.261 50.0 0.0 0.00 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2013 10582 0.599558 ATTGCATTGCAGCTTGACGT 59.400 45.0 11.76 0.0 40.61 4.34 R
3320 13996 0.329261 CTTCCAGGGACCTGATTGCA 59.671 55.0 19.65 0.0 46.30 4.08 R
4150 15010 0.036199 AAAGCAGAGCAGAGCAGAGG 60.036 55.0 0.00 0.0 0.00 3.69 R
5169 16037 0.813184 GTCGAGGGTCGTGGTATTCA 59.187 55.0 0.00 0.0 41.35 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 4.448210 AGTCGTGGTGTTGTGAACTAATT 58.552 39.130 0.00 0.00 0.00 1.40
132 133 4.272504 AGTCGTGGTGTTGTGAACTAATTG 59.727 41.667 0.00 0.00 0.00 2.32
134 135 3.638484 GTGGTGTTGTGAACTAATTGCC 58.362 45.455 0.00 0.00 0.00 4.52
135 136 2.292016 TGGTGTTGTGAACTAATTGCCG 59.708 45.455 0.00 0.00 0.00 5.69
136 137 2.550606 GGTGTTGTGAACTAATTGCCGA 59.449 45.455 0.00 0.00 0.00 5.54
170 171 3.780925 CCGCTTGGCTTTTCTTCTG 57.219 52.632 0.00 0.00 0.00 3.02
176 177 4.670221 CGCTTGGCTTTTCTTCTGTGATAC 60.670 45.833 0.00 0.00 0.00 2.24
238 239 6.257849 GTCAAACAGTGTTTCTCTGTCATGTA 59.742 38.462 18.34 0.00 44.03 2.29
315 316 1.960417 TTTGTCCATGCTTCACACGA 58.040 45.000 0.00 0.00 0.00 4.35
507 4985 3.320826 ACAAAGGTGACCAATAAACCAGC 59.679 43.478 3.63 0.00 36.37 4.85
510 4988 1.199097 GGTGACCAATAAACCAGCACG 59.801 52.381 0.00 0.00 33.94 5.34
576 5545 0.748005 GCATGACCGTGGCTGGTTAT 60.748 55.000 0.00 2.63 44.01 1.89
599 5568 2.880963 AACGCTTGAGAGGATAGAGC 57.119 50.000 0.00 0.00 0.00 4.09
954 5936 1.802960 GGACTAGATGATTGCATGCGG 59.197 52.381 14.09 0.00 34.11 5.69
966 5969 2.841215 TGCATGCGGGTATTAACCTAC 58.159 47.619 14.09 0.00 45.95 3.18
967 5970 1.796459 GCATGCGGGTATTAACCTACG 59.204 52.381 0.00 0.00 45.95 3.51
968 5971 2.804212 GCATGCGGGTATTAACCTACGT 60.804 50.000 0.00 0.00 45.95 3.57
969 5972 3.552684 GCATGCGGGTATTAACCTACGTA 60.553 47.826 0.00 0.00 45.95 3.57
973 5976 5.312895 TGCGGGTATTAACCTACGTAGATA 58.687 41.667 24.15 13.17 45.95 1.98
996 6004 5.643421 ATTTGAGTGCAGGAGGATTATCT 57.357 39.130 0.00 0.00 0.00 1.98
1009 6017 3.584848 AGGATTATCTGGTATGGCTGGAC 59.415 47.826 0.00 0.00 0.00 4.02
1554 7525 1.745489 ATTTGAGGACGAAGGCCGC 60.745 57.895 0.00 0.00 43.32 6.53
1659 7630 0.398318 GCAGGAGGTATGTCCCATCC 59.602 60.000 0.00 0.00 37.31 3.51
2013 10582 0.897863 CCTTCCCGGACAATTTGCCA 60.898 55.000 0.73 0.00 33.16 4.92
2072 10649 2.554344 GCCTCCTCGTCTCTCTGGATAT 60.554 54.545 0.00 0.00 0.00 1.63
2100 10677 3.997064 CTCACTGAGAAGCGGCCCG 62.997 68.421 0.00 0.00 0.00 6.13
2126 10709 1.743995 ATAGGTTGTTGTCCGGCGC 60.744 57.895 0.00 0.00 0.00 6.53
2165 12749 3.724374 TGCAAGAGTGTTGTACCTGTAC 58.276 45.455 1.56 0.45 36.63 2.90
2166 12750 3.386726 TGCAAGAGTGTTGTACCTGTACT 59.613 43.478 8.75 0.00 37.00 2.73
2167 12751 3.988517 GCAAGAGTGTTGTACCTGTACTC 59.011 47.826 8.75 0.00 38.37 2.59
2204 12794 1.902508 CCAACTGGAGAAGCTGGTCTA 59.097 52.381 0.00 0.00 37.37 2.59
2234 12827 2.368875 TCACTGGACTTGGGAAGAAGAC 59.631 50.000 0.00 0.00 0.00 3.01
2235 12828 2.370189 CACTGGACTTGGGAAGAAGACT 59.630 50.000 0.00 0.00 0.00 3.24
2237 12830 2.634940 CTGGACTTGGGAAGAAGACTGA 59.365 50.000 0.00 0.00 0.00 3.41
2385 12986 0.881118 TTGAAAGCAACCTCATCGCC 59.119 50.000 0.00 0.00 0.00 5.54
2593 13224 5.359194 TTTGGAGGAGATATGGAGTGAAC 57.641 43.478 0.00 0.00 0.00 3.18
2921 13596 3.521560 TCCTCGATTGTATGTTGCAGAC 58.478 45.455 0.00 0.00 0.00 3.51
3045 13720 2.621338 GTCTGGCTGATGAATCGACAA 58.379 47.619 0.00 0.00 0.00 3.18
3084 13759 7.549488 AGCATAAAACTACTACTTTACAGGCTG 59.451 37.037 14.16 14.16 0.00 4.85
3320 13996 6.295632 CGGGTCCCTGGAAATTTTCTAAAAAT 60.296 38.462 6.29 0.00 0.00 1.82
3404 14083 2.764128 GATGCCACCTCCTCCGGA 60.764 66.667 2.93 2.93 0.00 5.14
4131 14991 6.712549 ACTCGACAAAAGTACTTTTACAAGC 58.287 36.000 28.43 16.35 40.45 4.01
4132 14992 6.051646 TCGACAAAAGTACTTTTACAAGCC 57.948 37.500 28.43 11.57 40.45 4.35
4133 14993 5.585445 TCGACAAAAGTACTTTTACAAGCCA 59.415 36.000 28.43 10.11 40.45 4.75
4134 14994 6.093771 TCGACAAAAGTACTTTTACAAGCCAA 59.906 34.615 28.43 10.01 40.45 4.52
4135 14995 6.915843 CGACAAAAGTACTTTTACAAGCCAAT 59.084 34.615 28.43 4.84 40.45 3.16
4136 14996 8.071368 CGACAAAAGTACTTTTACAAGCCAATA 58.929 33.333 28.43 0.00 40.45 1.90
4137 14997 9.738832 GACAAAAGTACTTTTACAAGCCAATAA 57.261 29.630 28.43 0.00 40.45 1.40
4141 15001 9.744468 AAAGTACTTTTACAAGCCAATAAACTG 57.256 29.630 15.22 0.00 32.57 3.16
4142 15002 8.685838 AGTACTTTTACAAGCCAATAAACTGA 57.314 30.769 0.00 0.00 32.57 3.41
4143 15003 8.565416 AGTACTTTTACAAGCCAATAAACTGAC 58.435 33.333 0.00 0.00 32.57 3.51
4144 15004 6.435428 ACTTTTACAAGCCAATAAACTGACG 58.565 36.000 0.00 0.00 32.57 4.35
4145 15005 6.261381 ACTTTTACAAGCCAATAAACTGACGA 59.739 34.615 0.00 0.00 32.57 4.20
4146 15006 5.856126 TTACAAGCCAATAAACTGACGAG 57.144 39.130 0.00 0.00 0.00 4.18
4147 15007 2.484264 ACAAGCCAATAAACTGACGAGC 59.516 45.455 0.00 0.00 0.00 5.03
4148 15008 1.739067 AGCCAATAAACTGACGAGCC 58.261 50.000 0.00 0.00 0.00 4.70
4149 15009 0.733150 GCCAATAAACTGACGAGCCC 59.267 55.000 0.00 0.00 0.00 5.19
4150 15010 1.379527 CCAATAAACTGACGAGCCCC 58.620 55.000 0.00 0.00 0.00 5.80
4151 15011 1.379527 CAATAAACTGACGAGCCCCC 58.620 55.000 0.00 0.00 0.00 5.40
4152 15012 1.065418 CAATAAACTGACGAGCCCCCT 60.065 52.381 0.00 0.00 0.00 4.79
4153 15013 0.831307 ATAAACTGACGAGCCCCCTC 59.169 55.000 0.00 0.00 34.66 4.30
4154 15014 0.252103 TAAACTGACGAGCCCCCTCT 60.252 55.000 0.00 0.00 35.90 3.69
4155 15015 1.831652 AAACTGACGAGCCCCCTCTG 61.832 60.000 0.00 0.00 35.90 3.35
4156 15016 4.154347 CTGACGAGCCCCCTCTGC 62.154 72.222 0.00 0.00 35.90 4.26
4157 15017 4.704103 TGACGAGCCCCCTCTGCT 62.704 66.667 0.00 0.00 43.03 4.24
4162 15022 4.737476 AGCCCCCTCTGCTCTGCT 62.737 66.667 0.00 0.00 32.41 4.24
4163 15023 4.173924 GCCCCCTCTGCTCTGCTC 62.174 72.222 0.00 0.00 0.00 4.26
4164 15024 2.365370 CCCCCTCTGCTCTGCTCT 60.365 66.667 0.00 0.00 0.00 4.09
4165 15025 2.733669 CCCCCTCTGCTCTGCTCTG 61.734 68.421 0.00 0.00 0.00 3.35
4166 15026 2.187424 CCCTCTGCTCTGCTCTGC 59.813 66.667 0.00 0.00 0.00 4.26
4167 15027 2.360767 CCCTCTGCTCTGCTCTGCT 61.361 63.158 0.00 0.00 0.00 4.24
4168 15028 1.597989 CCTCTGCTCTGCTCTGCTT 59.402 57.895 0.00 0.00 0.00 3.91
4169 15029 0.036199 CCTCTGCTCTGCTCTGCTTT 60.036 55.000 0.00 0.00 0.00 3.51
4170 15030 1.361793 CTCTGCTCTGCTCTGCTTTC 58.638 55.000 0.00 0.00 0.00 2.62
4171 15031 0.975135 TCTGCTCTGCTCTGCTTTCT 59.025 50.000 0.00 0.00 0.00 2.52
4172 15032 2.166050 CTCTGCTCTGCTCTGCTTTCTA 59.834 50.000 0.00 0.00 0.00 2.10
4173 15033 2.094286 TCTGCTCTGCTCTGCTTTCTAC 60.094 50.000 0.00 0.00 0.00 2.59
4174 15034 1.620323 TGCTCTGCTCTGCTTTCTACA 59.380 47.619 0.00 0.00 0.00 2.74
4175 15035 1.999024 GCTCTGCTCTGCTTTCTACAC 59.001 52.381 0.00 0.00 0.00 2.90
4176 15036 2.611473 GCTCTGCTCTGCTTTCTACACA 60.611 50.000 0.00 0.00 0.00 3.72
4177 15037 3.657634 CTCTGCTCTGCTTTCTACACAA 58.342 45.455 0.00 0.00 0.00 3.33
4178 15038 4.060900 CTCTGCTCTGCTTTCTACACAAA 58.939 43.478 0.00 0.00 0.00 2.83
4179 15039 4.450976 TCTGCTCTGCTTTCTACACAAAA 58.549 39.130 0.00 0.00 0.00 2.44
4180 15040 4.881273 TCTGCTCTGCTTTCTACACAAAAA 59.119 37.500 0.00 0.00 0.00 1.94
4213 15073 7.965718 ACTACTACTACTACTAGATGACCTGG 58.034 42.308 0.00 0.00 0.00 4.45
4214 15074 6.828307 ACTACTACTACTAGATGACCTGGT 57.172 41.667 0.00 0.00 39.99 4.00
4215 15075 6.593807 ACTACTACTACTAGATGACCTGGTG 58.406 44.000 2.82 0.00 37.18 4.17
4216 15076 5.453866 ACTACTACTAGATGACCTGGTGT 57.546 43.478 2.82 0.00 37.18 4.16
4217 15077 5.194432 ACTACTACTAGATGACCTGGTGTG 58.806 45.833 2.82 0.00 37.18 3.82
4218 15078 3.366396 ACTACTAGATGACCTGGTGTGG 58.634 50.000 2.82 0.00 37.18 4.17
4219 15079 0.905357 ACTAGATGACCTGGTGTGGC 59.095 55.000 2.82 0.00 35.10 5.01
4220 15080 0.179000 CTAGATGACCTGGTGTGGCC 59.821 60.000 2.82 0.00 37.90 5.36
4221 15081 0.546507 TAGATGACCTGGTGTGGCCA 60.547 55.000 2.82 0.00 46.95 5.36
4222 15082 1.675641 GATGACCTGGTGTGGCCAC 60.676 63.158 29.67 29.67 43.61 5.01
4223 15083 2.129555 GATGACCTGGTGTGGCCACT 62.130 60.000 34.75 15.34 43.61 4.00
4224 15084 2.281761 GACCTGGTGTGGCCACTG 60.282 66.667 34.75 21.13 43.61 3.66
4225 15085 3.850098 GACCTGGTGTGGCCACTGG 62.850 68.421 34.75 29.07 43.61 4.00
4238 15098 2.254546 CCACTGGCACAAGTACTTGA 57.745 50.000 36.14 16.82 42.93 3.02
4239 15099 2.146342 CCACTGGCACAAGTACTTGAG 58.854 52.381 36.14 29.81 42.93 3.02
4240 15100 2.224281 CCACTGGCACAAGTACTTGAGA 60.224 50.000 36.14 16.22 42.93 3.27
4241 15101 3.466836 CACTGGCACAAGTACTTGAGAA 58.533 45.455 36.14 20.82 42.93 2.87
4242 15102 3.496130 CACTGGCACAAGTACTTGAGAAG 59.504 47.826 36.14 28.26 42.93 2.85
4243 15103 3.388024 ACTGGCACAAGTACTTGAGAAGA 59.612 43.478 36.14 17.19 42.93 2.87
4244 15104 4.040952 ACTGGCACAAGTACTTGAGAAGAT 59.959 41.667 36.14 17.38 42.93 2.40
4245 15105 4.569943 TGGCACAAGTACTTGAGAAGATC 58.430 43.478 36.14 17.67 42.93 2.75
4246 15106 3.614616 GGCACAAGTACTTGAGAAGATCG 59.385 47.826 36.14 16.58 42.93 3.69
4247 15107 4.238514 GCACAAGTACTTGAGAAGATCGT 58.761 43.478 36.14 12.43 42.93 3.73
4248 15108 4.686554 GCACAAGTACTTGAGAAGATCGTT 59.313 41.667 36.14 11.73 42.93 3.85
4249 15109 5.177696 GCACAAGTACTTGAGAAGATCGTTT 59.822 40.000 36.14 11.24 42.93 3.60
4250 15110 6.292919 GCACAAGTACTTGAGAAGATCGTTTT 60.293 38.462 36.14 11.05 42.93 2.43
4251 15111 7.284351 CACAAGTACTTGAGAAGATCGTTTTC 58.716 38.462 36.14 0.00 42.93 2.29
4252 15112 6.144080 ACAAGTACTTGAGAAGATCGTTTTCG 59.856 38.462 36.14 9.01 42.93 3.46
4253 15113 5.770417 AGTACTTGAGAAGATCGTTTTCGT 58.230 37.500 0.00 0.00 44.46 3.85
4254 15114 6.214399 AGTACTTGAGAAGATCGTTTTCGTT 58.786 36.000 0.00 0.00 44.46 3.85
4255 15115 5.577860 ACTTGAGAAGATCGTTTTCGTTC 57.422 39.130 0.00 0.00 44.46 3.95
4256 15116 5.047847 ACTTGAGAAGATCGTTTTCGTTCA 58.952 37.500 0.00 0.00 42.38 3.18
4257 15117 5.696724 ACTTGAGAAGATCGTTTTCGTTCAT 59.303 36.000 0.00 0.00 42.38 2.57
4258 15118 6.202954 ACTTGAGAAGATCGTTTTCGTTCATT 59.797 34.615 0.00 0.00 42.38 2.57
4259 15119 7.384115 ACTTGAGAAGATCGTTTTCGTTCATTA 59.616 33.333 0.00 0.00 42.38 1.90
4260 15120 7.827819 TGAGAAGATCGTTTTCGTTCATTAT 57.172 32.000 0.00 0.00 42.38 1.28
4261 15121 8.251750 TGAGAAGATCGTTTTCGTTCATTATT 57.748 30.769 0.00 0.00 42.38 1.40
4262 15122 9.361315 TGAGAAGATCGTTTTCGTTCATTATTA 57.639 29.630 0.00 0.00 42.38 0.98
4263 15123 9.836739 GAGAAGATCGTTTTCGTTCATTATTAG 57.163 33.333 0.00 0.00 42.38 1.73
4264 15124 9.367444 AGAAGATCGTTTTCGTTCATTATTAGT 57.633 29.630 0.00 0.00 42.38 2.24
4265 15125 9.968743 GAAGATCGTTTTCGTTCATTATTAGTT 57.031 29.630 0.00 0.00 42.38 2.24
4266 15126 9.968743 AAGATCGTTTTCGTTCATTATTAGTTC 57.031 29.630 0.00 0.00 42.38 3.01
4267 15127 9.367444 AGATCGTTTTCGTTCATTATTAGTTCT 57.633 29.630 0.00 0.00 42.38 3.01
4287 15147 8.429237 AGTTCTATCTTTCCTATATGTCCAGG 57.571 38.462 0.00 0.00 0.00 4.45
4288 15148 8.013667 AGTTCTATCTTTCCTATATGTCCAGGT 58.986 37.037 0.00 0.00 33.37 4.00
4289 15149 9.310449 GTTCTATCTTTCCTATATGTCCAGGTA 57.690 37.037 0.00 0.00 33.37 3.08
4293 15153 8.742125 ATCTTTCCTATATGTCCAGGTATTGA 57.258 34.615 0.00 0.00 33.37 2.57
4294 15154 8.561536 TCTTTCCTATATGTCCAGGTATTGAA 57.438 34.615 0.00 0.00 33.37 2.69
4295 15155 8.998814 TCTTTCCTATATGTCCAGGTATTGAAA 58.001 33.333 0.00 0.00 33.37 2.69
4296 15156 9.627123 CTTTCCTATATGTCCAGGTATTGAAAA 57.373 33.333 0.00 0.00 33.37 2.29
4306 15166 8.250332 TGTCCAGGTATTGAAAATTTTATCTGC 58.750 33.333 2.75 0.00 0.00 4.26
4307 15167 7.706607 GTCCAGGTATTGAAAATTTTATCTGCC 59.293 37.037 2.75 4.55 0.00 4.85
4308 15168 7.619302 TCCAGGTATTGAAAATTTTATCTGCCT 59.381 33.333 2.75 6.65 0.00 4.75
4309 15169 7.922811 CCAGGTATTGAAAATTTTATCTGCCTC 59.077 37.037 2.75 0.00 0.00 4.70
4310 15170 8.469200 CAGGTATTGAAAATTTTATCTGCCTCA 58.531 33.333 2.75 0.00 0.00 3.86
4311 15171 8.689972 AGGTATTGAAAATTTTATCTGCCTCAG 58.310 33.333 2.75 0.00 0.00 3.35
4312 15172 7.922811 GGTATTGAAAATTTTATCTGCCTCAGG 59.077 37.037 2.75 0.00 31.51 3.86
4323 15183 3.890674 CCTCAGGCAAGTAACCGC 58.109 61.111 0.00 0.00 0.00 5.68
4324 15184 1.003839 CCTCAGGCAAGTAACCGCA 60.004 57.895 0.00 0.00 0.00 5.69
4325 15185 1.021390 CCTCAGGCAAGTAACCGCAG 61.021 60.000 0.00 0.00 0.00 5.18
4326 15186 1.639298 CTCAGGCAAGTAACCGCAGC 61.639 60.000 0.00 0.00 0.00 5.25
4327 15187 1.672356 CAGGCAAGTAACCGCAGCT 60.672 57.895 0.00 0.00 0.00 4.24
4328 15188 0.391130 CAGGCAAGTAACCGCAGCTA 60.391 55.000 0.00 0.00 0.00 3.32
4329 15189 0.391263 AGGCAAGTAACCGCAGCTAC 60.391 55.000 0.00 0.00 0.00 3.58
4330 15190 0.391263 GGCAAGTAACCGCAGCTACT 60.391 55.000 0.00 0.00 0.00 2.57
4331 15191 1.439679 GCAAGTAACCGCAGCTACTT 58.560 50.000 0.68 0.68 38.58 2.24
4333 15193 1.732259 CAAGTAACCGCAGCTACTTGG 59.268 52.381 18.87 3.91 45.89 3.61
4334 15194 0.974383 AGTAACCGCAGCTACTTGGT 59.026 50.000 0.00 0.00 35.90 3.67
4335 15195 1.346722 AGTAACCGCAGCTACTTGGTT 59.653 47.619 13.50 13.50 46.04 3.67
4336 15196 2.564062 AGTAACCGCAGCTACTTGGTTA 59.436 45.455 11.93 11.93 42.66 2.85
4337 15197 1.804601 AACCGCAGCTACTTGGTTAC 58.195 50.000 8.77 0.00 42.66 2.50
4338 15198 0.036671 ACCGCAGCTACTTGGTTACC 60.037 55.000 0.00 0.00 0.00 2.85
4339 15199 0.249398 CCGCAGCTACTTGGTTACCT 59.751 55.000 2.07 0.00 0.00 3.08
4340 15200 1.338769 CCGCAGCTACTTGGTTACCTT 60.339 52.381 2.07 0.00 0.00 3.50
4341 15201 2.093869 CCGCAGCTACTTGGTTACCTTA 60.094 50.000 2.07 0.00 0.00 2.69
4342 15202 3.431766 CCGCAGCTACTTGGTTACCTTAT 60.432 47.826 2.07 0.00 0.00 1.73
4343 15203 4.189231 CGCAGCTACTTGGTTACCTTATT 58.811 43.478 2.07 0.00 0.00 1.40
4344 15204 4.270325 CGCAGCTACTTGGTTACCTTATTC 59.730 45.833 2.07 0.00 0.00 1.75
4345 15205 4.575236 GCAGCTACTTGGTTACCTTATTCC 59.425 45.833 2.07 0.00 0.00 3.01
4346 15206 5.629366 GCAGCTACTTGGTTACCTTATTCCT 60.629 44.000 2.07 0.00 0.00 3.36
4347 15207 6.407752 GCAGCTACTTGGTTACCTTATTCCTA 60.408 42.308 2.07 0.00 0.00 2.94
4348 15208 7.689559 GCAGCTACTTGGTTACCTTATTCCTAT 60.690 40.741 2.07 0.00 0.00 2.57
4349 15209 7.657761 CAGCTACTTGGTTACCTTATTCCTATG 59.342 40.741 2.07 0.00 0.00 2.23
4350 15210 7.567622 AGCTACTTGGTTACCTTATTCCTATGA 59.432 37.037 2.07 0.00 0.00 2.15
4351 15211 8.208903 GCTACTTGGTTACCTTATTCCTATGAA 58.791 37.037 2.07 0.00 34.33 2.57
4354 15214 9.408648 ACTTGGTTACCTTATTCCTATGAAATG 57.591 33.333 2.07 0.00 33.32 2.32
4355 15215 7.817418 TGGTTACCTTATTCCTATGAAATGC 57.183 36.000 2.07 0.00 33.32 3.56
4356 15216 7.350382 TGGTTACCTTATTCCTATGAAATGCA 58.650 34.615 2.07 0.00 33.32 3.96
4357 15217 7.284489 TGGTTACCTTATTCCTATGAAATGCAC 59.716 37.037 2.07 0.00 33.32 4.57
4358 15218 7.284489 GGTTACCTTATTCCTATGAAATGCACA 59.716 37.037 0.00 0.00 33.32 4.57
4359 15219 6.699575 ACCTTATTCCTATGAAATGCACAC 57.300 37.500 0.00 0.00 33.32 3.82
4360 15220 6.186957 ACCTTATTCCTATGAAATGCACACA 58.813 36.000 0.00 0.00 33.32 3.72
4361 15221 6.663093 ACCTTATTCCTATGAAATGCACACAA 59.337 34.615 0.00 0.00 33.32 3.33
4362 15222 7.342799 ACCTTATTCCTATGAAATGCACACAAT 59.657 33.333 0.00 0.00 33.32 2.71
4363 15223 7.864379 CCTTATTCCTATGAAATGCACACAATC 59.136 37.037 0.00 0.00 33.32 2.67
4364 15224 4.880886 TCCTATGAAATGCACACAATCG 57.119 40.909 0.00 0.00 0.00 3.34
4365 15225 3.627123 TCCTATGAAATGCACACAATCGG 59.373 43.478 0.00 0.00 0.00 4.18
4366 15226 3.627123 CCTATGAAATGCACACAATCGGA 59.373 43.478 0.00 0.00 0.00 4.55
4367 15227 2.987413 TGAAATGCACACAATCGGAC 57.013 45.000 0.00 0.00 0.00 4.79
4368 15228 2.225467 TGAAATGCACACAATCGGACA 58.775 42.857 0.00 0.00 0.00 4.02
4369 15229 2.819019 TGAAATGCACACAATCGGACAT 59.181 40.909 0.00 0.00 0.00 3.06
4370 15230 2.925578 AATGCACACAATCGGACATG 57.074 45.000 0.00 0.00 0.00 3.21
4371 15231 0.452987 ATGCACACAATCGGACATGC 59.547 50.000 0.00 0.00 0.00 4.06
4372 15232 0.606130 TGCACACAATCGGACATGCT 60.606 50.000 0.00 0.00 34.18 3.79
4373 15233 0.097674 GCACACAATCGGACATGCTC 59.902 55.000 0.00 0.00 0.00 4.26
4374 15234 1.441738 CACACAATCGGACATGCTCA 58.558 50.000 0.00 0.00 0.00 4.26
4375 15235 1.129251 CACACAATCGGACATGCTCAC 59.871 52.381 0.00 0.00 0.00 3.51
4376 15236 0.371301 CACAATCGGACATGCTCACG 59.629 55.000 0.00 0.00 0.00 4.35
4377 15237 0.246360 ACAATCGGACATGCTCACGA 59.754 50.000 0.00 0.00 39.85 4.35
4378 15238 1.134699 ACAATCGGACATGCTCACGAT 60.135 47.619 8.13 8.13 46.72 3.73
4379 15239 1.259770 CAATCGGACATGCTCACGATG 59.740 52.381 12.91 6.26 44.32 3.84
4380 15240 0.461548 ATCGGACATGCTCACGATGT 59.538 50.000 11.83 0.00 43.55 3.06
4381 15241 0.246360 TCGGACATGCTCACGATGTT 59.754 50.000 0.00 0.00 34.10 2.71
4382 15242 0.647410 CGGACATGCTCACGATGTTC 59.353 55.000 0.00 0.00 34.10 3.18
4383 15243 1.737029 CGGACATGCTCACGATGTTCT 60.737 52.381 0.00 0.00 34.10 3.01
4384 15244 2.350522 GGACATGCTCACGATGTTCTT 58.649 47.619 0.00 0.00 34.10 2.52
4385 15245 2.744202 GGACATGCTCACGATGTTCTTT 59.256 45.455 0.00 0.00 34.10 2.52
4386 15246 3.189287 GGACATGCTCACGATGTTCTTTT 59.811 43.478 0.00 0.00 34.10 2.27
4387 15247 4.151258 ACATGCTCACGATGTTCTTTTG 57.849 40.909 0.00 0.00 29.39 2.44
4388 15248 2.686558 TGCTCACGATGTTCTTTTGC 57.313 45.000 0.00 0.00 0.00 3.68
4389 15249 1.266718 TGCTCACGATGTTCTTTTGCC 59.733 47.619 0.00 0.00 0.00 4.52
4390 15250 1.401539 GCTCACGATGTTCTTTTGCCC 60.402 52.381 0.00 0.00 0.00 5.36
4391 15251 2.154462 CTCACGATGTTCTTTTGCCCT 58.846 47.619 0.00 0.00 0.00 5.19
4392 15252 1.879380 TCACGATGTTCTTTTGCCCTG 59.121 47.619 0.00 0.00 0.00 4.45
4393 15253 1.608590 CACGATGTTCTTTTGCCCTGT 59.391 47.619 0.00 0.00 0.00 4.00
4394 15254 1.880027 ACGATGTTCTTTTGCCCTGTC 59.120 47.619 0.00 0.00 0.00 3.51
4395 15255 1.879380 CGATGTTCTTTTGCCCTGTCA 59.121 47.619 0.00 0.00 0.00 3.58
4396 15256 2.489329 CGATGTTCTTTTGCCCTGTCAT 59.511 45.455 0.00 0.00 0.00 3.06
4397 15257 3.689161 CGATGTTCTTTTGCCCTGTCATA 59.311 43.478 0.00 0.00 0.00 2.15
4398 15258 4.336433 CGATGTTCTTTTGCCCTGTCATAT 59.664 41.667 0.00 0.00 0.00 1.78
4399 15259 5.163622 CGATGTTCTTTTGCCCTGTCATATT 60.164 40.000 0.00 0.00 0.00 1.28
4400 15260 5.643379 TGTTCTTTTGCCCTGTCATATTC 57.357 39.130 0.00 0.00 0.00 1.75
4401 15261 5.076182 TGTTCTTTTGCCCTGTCATATTCA 58.924 37.500 0.00 0.00 0.00 2.57
4402 15262 5.048083 TGTTCTTTTGCCCTGTCATATTCAC 60.048 40.000 0.00 0.00 0.00 3.18
4403 15263 4.661222 TCTTTTGCCCTGTCATATTCACA 58.339 39.130 0.00 0.00 0.00 3.58
4404 15264 5.076182 TCTTTTGCCCTGTCATATTCACAA 58.924 37.500 0.00 0.00 0.00 3.33
4405 15265 5.538053 TCTTTTGCCCTGTCATATTCACAAA 59.462 36.000 0.00 0.00 0.00 2.83
4406 15266 5.798125 TTTGCCCTGTCATATTCACAAAA 57.202 34.783 0.00 0.00 0.00 2.44
4407 15267 4.782019 TGCCCTGTCATATTCACAAAAC 57.218 40.909 0.00 0.00 0.00 2.43
4408 15268 3.509575 TGCCCTGTCATATTCACAAAACC 59.490 43.478 0.00 0.00 0.00 3.27
4409 15269 3.763897 GCCCTGTCATATTCACAAAACCT 59.236 43.478 0.00 0.00 0.00 3.50
4410 15270 4.380867 GCCCTGTCATATTCACAAAACCTG 60.381 45.833 0.00 0.00 0.00 4.00
4411 15271 5.009631 CCCTGTCATATTCACAAAACCTGA 58.990 41.667 0.00 0.00 0.00 3.86
4412 15272 5.106157 CCCTGTCATATTCACAAAACCTGAC 60.106 44.000 0.00 0.00 33.79 3.51
4413 15273 5.473162 CCTGTCATATTCACAAAACCTGACA 59.527 40.000 0.00 0.00 39.18 3.58
4414 15274 6.016360 CCTGTCATATTCACAAAACCTGACAA 60.016 38.462 0.00 0.00 40.45 3.18
4415 15275 6.969366 TGTCATATTCACAAAACCTGACAAG 58.031 36.000 0.00 0.00 38.72 3.16
4416 15276 5.858581 GTCATATTCACAAAACCTGACAAGC 59.141 40.000 0.00 0.00 33.49 4.01
4417 15277 5.769662 TCATATTCACAAAACCTGACAAGCT 59.230 36.000 0.00 0.00 0.00 3.74
4418 15278 4.574599 ATTCACAAAACCTGACAAGCTC 57.425 40.909 0.00 0.00 0.00 4.09
4419 15279 2.997980 TCACAAAACCTGACAAGCTCA 58.002 42.857 0.00 0.00 0.00 4.26
4420 15280 2.682856 TCACAAAACCTGACAAGCTCAC 59.317 45.455 0.00 0.00 0.00 3.51
4421 15281 2.423185 CACAAAACCTGACAAGCTCACA 59.577 45.455 0.00 0.00 0.00 3.58
4422 15282 2.423538 ACAAAACCTGACAAGCTCACAC 59.576 45.455 0.00 0.00 0.00 3.82
4423 15283 2.684881 CAAAACCTGACAAGCTCACACT 59.315 45.455 0.00 0.00 0.00 3.55
4424 15284 1.959042 AACCTGACAAGCTCACACTG 58.041 50.000 0.00 0.00 0.00 3.66
4425 15285 0.833287 ACCTGACAAGCTCACACTGT 59.167 50.000 0.00 0.00 0.00 3.55
4426 15286 1.210478 ACCTGACAAGCTCACACTGTT 59.790 47.619 0.00 0.00 0.00 3.16
4427 15287 1.869767 CCTGACAAGCTCACACTGTTC 59.130 52.381 0.00 0.00 0.00 3.18
4428 15288 2.484417 CCTGACAAGCTCACACTGTTCT 60.484 50.000 0.00 0.00 0.00 3.01
4429 15289 2.543012 CTGACAAGCTCACACTGTTCTG 59.457 50.000 0.00 0.00 0.00 3.02
4430 15290 1.869767 GACAAGCTCACACTGTTCTGG 59.130 52.381 0.00 0.00 0.00 3.86
4431 15291 1.233019 CAAGCTCACACTGTTCTGGG 58.767 55.000 0.00 0.00 0.00 4.45
4432 15292 0.839946 AAGCTCACACTGTTCTGGGT 59.160 50.000 0.00 0.00 0.00 4.51
4433 15293 0.107456 AGCTCACACTGTTCTGGGTG 59.893 55.000 5.87 5.87 39.13 4.61
4434 15294 0.106708 GCTCACACTGTTCTGGGTGA 59.893 55.000 12.67 12.67 37.89 4.02
4435 15295 1.271054 GCTCACACTGTTCTGGGTGAT 60.271 52.381 13.44 0.00 39.33 3.06
4436 15296 2.420642 CTCACACTGTTCTGGGTGATG 58.579 52.381 13.44 6.31 39.33 3.07
4437 15297 1.072173 TCACACTGTTCTGGGTGATGG 59.928 52.381 9.98 0.00 35.51 3.51
4438 15298 1.140312 ACACTGTTCTGGGTGATGGT 58.860 50.000 0.00 0.00 37.22 3.55
4439 15299 2.038426 CACACTGTTCTGGGTGATGGTA 59.962 50.000 6.27 0.00 37.22 3.25
4440 15300 2.708861 ACACTGTTCTGGGTGATGGTAA 59.291 45.455 0.00 0.00 37.22 2.85
4441 15301 3.330701 ACACTGTTCTGGGTGATGGTAAT 59.669 43.478 0.00 0.00 37.22 1.89
4442 15302 4.534500 ACACTGTTCTGGGTGATGGTAATA 59.466 41.667 0.00 0.00 37.22 0.98
4443 15303 5.191722 ACACTGTTCTGGGTGATGGTAATAT 59.808 40.000 0.00 0.00 37.22 1.28
4444 15304 6.122277 CACTGTTCTGGGTGATGGTAATATT 58.878 40.000 0.00 0.00 35.69 1.28
4445 15305 6.038603 CACTGTTCTGGGTGATGGTAATATTG 59.961 42.308 0.00 0.00 35.69 1.90
4446 15306 4.887071 TGTTCTGGGTGATGGTAATATTGC 59.113 41.667 0.00 0.00 0.00 3.56
4447 15307 4.098914 TCTGGGTGATGGTAATATTGCC 57.901 45.455 15.13 15.13 0.00 4.52
4448 15308 3.461458 TCTGGGTGATGGTAATATTGCCA 59.539 43.478 25.05 25.05 46.95 4.92
4465 15325 2.148446 CCATGGGCAATCTTCCAAGA 57.852 50.000 2.85 0.00 39.78 3.02
4497 15357 8.954950 ATGTTCTACATTTCTAGATCACCTTG 57.045 34.615 0.00 0.00 34.67 3.61
4498 15358 6.818644 TGTTCTACATTTCTAGATCACCTTGC 59.181 38.462 0.00 0.00 0.00 4.01
4499 15359 6.544928 TCTACATTTCTAGATCACCTTGCA 57.455 37.500 0.00 0.00 0.00 4.08
4500 15360 6.341316 TCTACATTTCTAGATCACCTTGCAC 58.659 40.000 0.00 0.00 0.00 4.57
4501 15361 4.265073 ACATTTCTAGATCACCTTGCACC 58.735 43.478 0.00 0.00 0.00 5.01
4502 15362 4.263462 ACATTTCTAGATCACCTTGCACCA 60.263 41.667 0.00 0.00 0.00 4.17
4503 15363 4.574674 TTTCTAGATCACCTTGCACCAT 57.425 40.909 0.00 0.00 0.00 3.55
4504 15364 3.548745 TCTAGATCACCTTGCACCATG 57.451 47.619 0.00 0.00 0.00 3.66
4505 15365 2.171237 TCTAGATCACCTTGCACCATGG 59.829 50.000 11.19 11.19 35.21 3.66
4506 15366 0.033796 AGATCACCTTGCACCATGGG 60.034 55.000 18.09 6.26 33.63 4.00
4507 15367 1.669999 GATCACCTTGCACCATGGGC 61.670 60.000 18.09 16.81 33.63 5.36
4508 15368 2.444004 ATCACCTTGCACCATGGGCA 62.444 55.000 20.10 20.10 40.00 5.36
4510 15370 2.209315 ACCTTGCACCATGGGCAAC 61.209 57.895 27.00 11.34 45.57 4.17
4511 15371 2.208619 CCTTGCACCATGGGCAACA 61.209 57.895 27.00 14.67 45.57 3.33
4512 15372 1.005867 CTTGCACCATGGGCAACAC 60.006 57.895 27.00 8.29 45.57 3.32
4513 15373 2.438951 CTTGCACCATGGGCAACACC 62.439 60.000 27.00 6.18 45.57 4.16
4514 15374 2.601367 GCACCATGGGCAACACCT 60.601 61.111 18.09 0.00 39.10 4.00
4515 15375 2.934570 GCACCATGGGCAACACCTG 61.935 63.158 18.09 3.34 39.10 4.00
4523 15383 4.614673 GCAACACCTGCGTTTCTG 57.385 55.556 0.00 0.00 42.37 3.02
4524 15384 1.008538 GCAACACCTGCGTTTCTGG 60.009 57.895 0.00 0.00 42.37 3.86
4525 15385 1.724582 GCAACACCTGCGTTTCTGGT 61.725 55.000 0.00 0.00 46.46 4.00
4526 15386 0.738389 CAACACCTGCGTTTCTGGTT 59.262 50.000 0.00 0.00 43.52 3.67
4527 15387 1.021968 AACACCTGCGTTTCTGGTTC 58.978 50.000 0.00 0.00 43.52 3.62
4528 15388 1.157870 ACACCTGCGTTTCTGGTTCG 61.158 55.000 0.00 0.00 43.52 3.95
4529 15389 1.597027 ACCTGCGTTTCTGGTTCGG 60.597 57.895 0.00 0.00 43.52 4.30
4530 15390 2.325082 CCTGCGTTTCTGGTTCGGG 61.325 63.158 0.00 0.00 0.00 5.14
4531 15391 1.301401 CTGCGTTTCTGGTTCGGGA 60.301 57.895 0.00 0.00 0.00 5.14
4532 15392 0.673644 CTGCGTTTCTGGTTCGGGAT 60.674 55.000 0.00 0.00 0.00 3.85
4533 15393 0.953471 TGCGTTTCTGGTTCGGGATG 60.953 55.000 0.00 0.00 0.00 3.51
4534 15394 0.953960 GCGTTTCTGGTTCGGGATGT 60.954 55.000 0.00 0.00 0.00 3.06
4535 15395 1.673626 GCGTTTCTGGTTCGGGATGTA 60.674 52.381 0.00 0.00 0.00 2.29
4536 15396 2.901249 CGTTTCTGGTTCGGGATGTAT 58.099 47.619 0.00 0.00 0.00 2.29
4537 15397 2.607635 CGTTTCTGGTTCGGGATGTATG 59.392 50.000 0.00 0.00 0.00 2.39
4538 15398 3.606687 GTTTCTGGTTCGGGATGTATGT 58.393 45.455 0.00 0.00 0.00 2.29
4539 15399 2.979814 TCTGGTTCGGGATGTATGTG 57.020 50.000 0.00 0.00 0.00 3.21
4540 15400 2.184533 TCTGGTTCGGGATGTATGTGT 58.815 47.619 0.00 0.00 0.00 3.72
4541 15401 3.367321 TCTGGTTCGGGATGTATGTGTA 58.633 45.455 0.00 0.00 0.00 2.90
4542 15402 3.964688 TCTGGTTCGGGATGTATGTGTAT 59.035 43.478 0.00 0.00 0.00 2.29
4543 15403 5.141910 TCTGGTTCGGGATGTATGTGTATA 58.858 41.667 0.00 0.00 0.00 1.47
4544 15404 5.778241 TCTGGTTCGGGATGTATGTGTATAT 59.222 40.000 0.00 0.00 0.00 0.86
4545 15405 6.269077 TCTGGTTCGGGATGTATGTGTATATT 59.731 38.462 0.00 0.00 0.00 1.28
4546 15406 6.833041 TGGTTCGGGATGTATGTGTATATTT 58.167 36.000 0.00 0.00 0.00 1.40
4547 15407 7.964624 TGGTTCGGGATGTATGTGTATATTTA 58.035 34.615 0.00 0.00 0.00 1.40
4548 15408 8.598916 TGGTTCGGGATGTATGTGTATATTTAT 58.401 33.333 0.00 0.00 0.00 1.40
4549 15409 8.879759 GGTTCGGGATGTATGTGTATATTTATG 58.120 37.037 0.00 0.00 0.00 1.90
4550 15410 8.388103 GTTCGGGATGTATGTGTATATTTATGC 58.612 37.037 0.00 0.00 0.00 3.14
4551 15411 6.754675 TCGGGATGTATGTGTATATTTATGCG 59.245 38.462 0.00 0.00 0.00 4.73
4552 15412 6.533723 CGGGATGTATGTGTATATTTATGCGT 59.466 38.462 0.00 0.00 0.00 5.24
4553 15413 7.464045 CGGGATGTATGTGTATATTTATGCGTG 60.464 40.741 0.00 0.00 0.00 5.34
4554 15414 7.333423 GGGATGTATGTGTATATTTATGCGTGT 59.667 37.037 0.00 0.00 0.00 4.49
4555 15415 9.361315 GGATGTATGTGTATATTTATGCGTGTA 57.639 33.333 0.00 0.00 0.00 2.90
4573 15433 8.781067 TGCGTGTAATTCATAATAATCTTTGC 57.219 30.769 0.00 0.00 0.00 3.68
4574 15434 7.860373 TGCGTGTAATTCATAATAATCTTTGCC 59.140 33.333 0.00 0.00 0.00 4.52
4575 15435 7.860373 GCGTGTAATTCATAATAATCTTTGCCA 59.140 33.333 0.00 0.00 0.00 4.92
4576 15436 9.729023 CGTGTAATTCATAATAATCTTTGCCAA 57.271 29.630 0.00 0.00 0.00 4.52
4588 15448 6.806388 AATCTTTGCCAATTTGTCATTTCC 57.194 33.333 0.00 0.00 0.00 3.13
4589 15449 5.287674 TCTTTGCCAATTTGTCATTTCCA 57.712 34.783 0.00 0.00 0.00 3.53
4590 15450 5.678583 TCTTTGCCAATTTGTCATTTCCAA 58.321 33.333 0.00 0.00 0.00 3.53
4591 15451 6.118170 TCTTTGCCAATTTGTCATTTCCAAA 58.882 32.000 0.00 0.00 36.34 3.28
4592 15452 6.771749 TCTTTGCCAATTTGTCATTTCCAAAT 59.228 30.769 0.00 0.00 42.68 2.32
4603 15463 5.126869 TGTCATTTCCAAATTGTGTGTCAGT 59.873 36.000 0.00 0.00 0.00 3.41
4606 15466 5.850557 TTTCCAAATTGTGTGTCAGTGAT 57.149 34.783 0.00 0.00 0.00 3.06
4634 15494 3.190874 GCAAAGGGTACTGAAGATCGAG 58.809 50.000 0.00 0.00 0.00 4.04
4696 15556 0.944311 GCGAGGAAGCAACGACAAGA 60.944 55.000 0.00 0.00 37.05 3.02
4740 15600 3.050275 GCTGCCCACTCGAACCAC 61.050 66.667 0.00 0.00 0.00 4.16
4854 15720 2.235546 GCTCCGGCCGATTGTAATC 58.764 57.895 30.73 2.41 0.00 1.75
4855 15721 1.228657 GCTCCGGCCGATTGTAATCC 61.229 60.000 30.73 0.00 31.68 3.01
4867 15733 6.075780 CGATTGTAATCCAGCTGTAGCAGC 62.076 50.000 13.81 12.68 43.46 5.25
4889 15755 3.056832 GAGGGAGGTTGGGAGGAAATAT 58.943 50.000 0.00 0.00 0.00 1.28
4914 15781 0.034477 ACCGAATTCCCCATTTCGCT 60.034 50.000 0.00 0.00 42.47 4.93
4974 15841 5.163447 CCCTTACACTTGGTATCAGATTCGA 60.163 44.000 0.00 0.00 0.00 3.71
4976 15843 6.405953 CCTTACACTTGGTATCAGATTCGACT 60.406 42.308 0.00 0.00 0.00 4.18
5158 16026 0.620556 TCCTCAAGGCCATGGAGAAC 59.379 55.000 18.40 1.61 34.44 3.01
5169 16037 3.582208 GCCATGGAGAACCTGATCTCTAT 59.418 47.826 18.40 1.69 45.30 1.98
5248 16119 2.942752 GCTGTTGATGGAGATGGAGCAA 60.943 50.000 0.00 0.00 0.00 3.91
5305 16176 2.158900 ACATGAAGATCCATCACCGTCC 60.159 50.000 0.00 0.00 0.00 4.79
5351 16222 2.367202 GCCCCGACTGATTCCCTCA 61.367 63.158 0.00 0.00 0.00 3.86
5407 16279 1.273666 ACTTATGTCCCTCCTCCGGTT 60.274 52.381 0.00 0.00 0.00 4.44
5443 16315 2.807392 GTCCAATTTACCGTTCCGTCAA 59.193 45.455 0.00 0.00 0.00 3.18
5577 16450 1.594862 CGAAGATCAATTCCGGCTGTC 59.405 52.381 0.00 0.00 0.00 3.51
5671 16855 2.027073 GATGCAGCGTCGTCAACCA 61.027 57.895 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 135 0.931005 GGCTGATAGAACGCCTTTCG 59.069 55.000 0.00 0.00 40.62 3.46
135 136 0.931005 CGGCTGATAGAACGCCTTTC 59.069 55.000 0.00 0.00 41.61 2.62
136 137 1.090052 GCGGCTGATAGAACGCCTTT 61.090 55.000 0.00 0.00 45.70 3.11
154 155 3.930634 ATCACAGAAGAAAAGCCAAGC 57.069 42.857 0.00 0.00 0.00 4.01
170 171 6.823689 ACCATGAAAAGGTGTATCAGTATCAC 59.176 38.462 0.00 0.00 38.13 3.06
238 239 0.885879 TCTGTCCGAGCAATGTACGT 59.114 50.000 0.00 0.00 0.00 3.57
267 268 4.360889 AGGATCATGGAGAGAGAAACACT 58.639 43.478 0.00 0.00 0.00 3.55
295 296 2.293170 TCGTGTGAAGCATGGACAAAA 58.707 42.857 0.00 0.00 34.91 2.44
308 309 3.326836 TTGGCACAGATTATCGTGTGA 57.673 42.857 20.58 5.90 45.84 3.58
315 316 6.357579 TGGTCAAAATTTGGCACAGATTAT 57.642 33.333 12.62 0.00 42.53 1.28
507 4985 6.527023 CAGTGTTATCAAGTACTACCTTCGTG 59.473 42.308 0.00 0.00 0.00 4.35
510 4988 6.338937 CCCAGTGTTATCAAGTACTACCTTC 58.661 44.000 0.00 0.00 0.00 3.46
599 5568 5.356751 TGAATGGATACCATGTTTCCTTTCG 59.643 40.000 18.38 0.00 44.40 3.46
966 5969 4.747108 CCTCCTGCACTCAAATTATCTACG 59.253 45.833 0.00 0.00 0.00 3.51
967 5970 5.918608 TCCTCCTGCACTCAAATTATCTAC 58.081 41.667 0.00 0.00 0.00 2.59
968 5971 6.753913 ATCCTCCTGCACTCAAATTATCTA 57.246 37.500 0.00 0.00 0.00 1.98
969 5972 5.643421 ATCCTCCTGCACTCAAATTATCT 57.357 39.130 0.00 0.00 0.00 1.98
973 5976 5.826737 CAGATAATCCTCCTGCACTCAAATT 59.173 40.000 0.00 0.00 0.00 1.82
996 6004 3.355378 CATGAAAAGTCCAGCCATACCA 58.645 45.455 0.00 0.00 0.00 3.25
1009 6017 1.661341 CTCTCCTCGCCCATGAAAAG 58.339 55.000 0.00 0.00 0.00 2.27
1414 6447 4.840716 AGAAGAGCATGATGAAGAAGGT 57.159 40.909 0.00 0.00 0.00 3.50
1554 7525 3.508793 GGGCATCATCATTATCCCACTTG 59.491 47.826 0.00 0.00 34.01 3.16
1659 7630 1.561542 ACACCCTTCCAGCCAGAATAG 59.438 52.381 0.00 0.00 0.00 1.73
1801 7797 2.729194 ACTGTGGAAGAGATAGAGCGT 58.271 47.619 0.00 0.00 0.00 5.07
2013 10582 0.599558 ATTGCATTGCAGCTTGACGT 59.400 45.000 11.76 0.00 40.61 4.34
2100 10677 2.084546 GACAACAACCTATGGCCACTC 58.915 52.381 8.16 0.00 0.00 3.51
2126 10709 3.520402 ACAAGTTGTGTTGCCCCG 58.480 55.556 7.96 0.00 37.01 5.73
2204 12794 4.104738 TCCCAAGTCCAGTGAAGAAAGAAT 59.895 41.667 0.00 0.00 0.00 2.40
2234 12827 5.183969 ACAACTCATCCTTGACATCATCAG 58.816 41.667 0.00 0.00 38.99 2.90
2235 12828 5.169992 ACAACTCATCCTTGACATCATCA 57.830 39.130 0.00 0.00 34.65 3.07
2237 12830 4.703575 CCAACAACTCATCCTTGACATCAT 59.296 41.667 0.00 0.00 0.00 2.45
2277 12872 2.038952 TGTGCAAGATTCCAGCAGTACT 59.961 45.455 0.00 0.00 39.21 2.73
2336 12937 6.808321 AGTTACTGGCATTAGACCTCATAA 57.192 37.500 0.00 0.00 0.00 1.90
2402 13003 3.670627 CGGCTTGCACAAGAGGAAAATAC 60.671 47.826 14.44 0.00 40.79 1.89
2528 13141 2.156051 GACACCCTCGTCACCCTGTC 62.156 65.000 0.00 0.00 35.88 3.51
2593 13224 1.067142 TGGAGAATTGTCGGTTCCTCG 60.067 52.381 0.00 0.00 0.00 4.63
2680 13317 4.260170 AGATGACTTGATCTTCCAAGCAC 58.740 43.478 0.00 0.00 45.47 4.40
2921 13596 3.756434 ACGTACCCATGAAACAAGAATGG 59.244 43.478 0.00 0.00 40.53 3.16
3320 13996 0.329261 CTTCCAGGGACCTGATTGCA 59.671 55.000 19.65 0.00 46.30 4.08
3444 14123 1.065928 GCGTGGATCCGGTCACTAG 59.934 63.158 7.39 0.00 0.00 2.57
3554 14311 3.580319 GGAGCACCTGGGGGTTGT 61.580 66.667 0.44 0.00 44.73 3.32
3822 14660 3.118920 TCCTGTACTCTCTCTCTCTGTCG 60.119 52.174 0.00 0.00 0.00 4.35
3963 14821 7.710475 TGCTTATCAGTTGATCGTGATTATGAA 59.290 33.333 9.55 0.17 35.08 2.57
4115 14975 9.744468 CAGTTTATTGGCTTGTAAAAGTACTTT 57.256 29.630 15.22 15.22 0.00 2.66
4116 14976 9.127277 TCAGTTTATTGGCTTGTAAAAGTACTT 57.873 29.630 1.12 1.12 0.00 2.24
4117 14977 8.565416 GTCAGTTTATTGGCTTGTAAAAGTACT 58.435 33.333 0.00 0.00 0.00 2.73
4118 14978 7.532884 CGTCAGTTTATTGGCTTGTAAAAGTAC 59.467 37.037 0.00 0.00 0.00 2.73
4119 14979 7.441760 TCGTCAGTTTATTGGCTTGTAAAAGTA 59.558 33.333 0.00 0.00 0.00 2.24
4120 14980 6.261381 TCGTCAGTTTATTGGCTTGTAAAAGT 59.739 34.615 0.00 0.00 0.00 2.66
4121 14981 6.664515 TCGTCAGTTTATTGGCTTGTAAAAG 58.335 36.000 0.00 0.00 0.00 2.27
4122 14982 6.621316 TCGTCAGTTTATTGGCTTGTAAAA 57.379 33.333 0.00 0.00 0.00 1.52
4123 14983 5.334569 GCTCGTCAGTTTATTGGCTTGTAAA 60.335 40.000 0.00 0.00 0.00 2.01
4124 14984 4.153475 GCTCGTCAGTTTATTGGCTTGTAA 59.847 41.667 0.00 0.00 0.00 2.41
4125 14985 3.682858 GCTCGTCAGTTTATTGGCTTGTA 59.317 43.478 0.00 0.00 0.00 2.41
4126 14986 2.484264 GCTCGTCAGTTTATTGGCTTGT 59.516 45.455 0.00 0.00 0.00 3.16
4127 14987 2.159517 GGCTCGTCAGTTTATTGGCTTG 60.160 50.000 0.00 0.00 0.00 4.01
4128 14988 2.084546 GGCTCGTCAGTTTATTGGCTT 58.915 47.619 0.00 0.00 0.00 4.35
4129 14989 1.679032 GGGCTCGTCAGTTTATTGGCT 60.679 52.381 0.00 0.00 0.00 4.75
4130 14990 0.733150 GGGCTCGTCAGTTTATTGGC 59.267 55.000 0.00 0.00 0.00 4.52
4131 14991 1.379527 GGGGCTCGTCAGTTTATTGG 58.620 55.000 0.00 0.00 0.00 3.16
4132 14992 1.065418 AGGGGGCTCGTCAGTTTATTG 60.065 52.381 0.00 0.00 0.00 1.90
4133 14993 1.209747 GAGGGGGCTCGTCAGTTTATT 59.790 52.381 1.41 0.00 0.00 1.40
4134 14994 0.831307 GAGGGGGCTCGTCAGTTTAT 59.169 55.000 1.41 0.00 0.00 1.40
4135 14995 0.252103 AGAGGGGGCTCGTCAGTTTA 60.252 55.000 10.07 0.00 33.03 2.01
4136 14996 1.536662 AGAGGGGGCTCGTCAGTTT 60.537 57.895 10.07 0.00 33.03 2.66
4137 14997 2.120718 AGAGGGGGCTCGTCAGTT 59.879 61.111 10.07 0.00 33.03 3.16
4138 14998 2.681778 CAGAGGGGGCTCGTCAGT 60.682 66.667 10.07 0.00 33.03 3.41
4139 14999 4.154347 GCAGAGGGGGCTCGTCAG 62.154 72.222 10.07 2.11 33.03 3.51
4140 15000 4.704103 AGCAGAGGGGGCTCGTCA 62.704 66.667 10.07 0.00 36.81 4.35
4145 15005 4.737476 AGCAGAGCAGAGGGGGCT 62.737 66.667 0.00 0.00 46.07 5.19
4146 15006 4.173924 GAGCAGAGCAGAGGGGGC 62.174 72.222 0.00 0.00 0.00 5.80
4147 15007 2.365370 AGAGCAGAGCAGAGGGGG 60.365 66.667 0.00 0.00 0.00 5.40
4148 15008 2.901813 CAGAGCAGAGCAGAGGGG 59.098 66.667 0.00 0.00 0.00 4.79
4149 15009 1.901654 AAGCAGAGCAGAGCAGAGGG 61.902 60.000 0.00 0.00 0.00 4.30
4150 15010 0.036199 AAAGCAGAGCAGAGCAGAGG 60.036 55.000 0.00 0.00 0.00 3.69
4151 15011 1.066716 AGAAAGCAGAGCAGAGCAGAG 60.067 52.381 0.00 0.00 0.00 3.35
4152 15012 0.975135 AGAAAGCAGAGCAGAGCAGA 59.025 50.000 0.00 0.00 0.00 4.26
4153 15013 2.270047 GTAGAAAGCAGAGCAGAGCAG 58.730 52.381 0.00 0.00 0.00 4.24
4154 15014 1.620323 TGTAGAAAGCAGAGCAGAGCA 59.380 47.619 0.00 0.00 0.00 4.26
4155 15015 1.999024 GTGTAGAAAGCAGAGCAGAGC 59.001 52.381 0.00 0.00 0.00 4.09
4156 15016 3.309961 TGTGTAGAAAGCAGAGCAGAG 57.690 47.619 0.00 0.00 0.00 3.35
4157 15017 3.751479 TTGTGTAGAAAGCAGAGCAGA 57.249 42.857 0.00 0.00 0.00 4.26
4158 15018 4.818534 TTTTGTGTAGAAAGCAGAGCAG 57.181 40.909 0.00 0.00 0.00 4.24
4187 15047 8.431222 CCAGGTCATCTAGTAGTAGTAGTAGTT 58.569 40.741 15.95 7.87 34.75 2.24
4188 15048 7.568366 ACCAGGTCATCTAGTAGTAGTAGTAGT 59.432 40.741 15.95 0.00 34.75 2.73
4189 15049 7.874016 CACCAGGTCATCTAGTAGTAGTAGTAG 59.126 44.444 11.81 11.81 34.54 2.57
4190 15050 7.346698 ACACCAGGTCATCTAGTAGTAGTAGTA 59.653 40.741 11.08 0.69 0.00 1.82
4191 15051 6.158344 ACACCAGGTCATCTAGTAGTAGTAGT 59.842 42.308 11.08 0.00 0.00 2.73
4192 15052 6.483974 CACACCAGGTCATCTAGTAGTAGTAG 59.516 46.154 5.75 5.75 0.00 2.57
4193 15053 6.354938 CACACCAGGTCATCTAGTAGTAGTA 58.645 44.000 4.51 0.00 0.00 1.82
4194 15054 5.194432 CACACCAGGTCATCTAGTAGTAGT 58.806 45.833 4.51 0.00 0.00 2.73
4195 15055 4.580995 CCACACCAGGTCATCTAGTAGTAG 59.419 50.000 0.00 0.00 0.00 2.57
4196 15056 4.533815 CCACACCAGGTCATCTAGTAGTA 58.466 47.826 0.00 0.00 0.00 1.82
4197 15057 3.366396 CCACACCAGGTCATCTAGTAGT 58.634 50.000 0.00 0.00 0.00 2.73
4198 15058 2.101582 GCCACACCAGGTCATCTAGTAG 59.898 54.545 0.00 0.00 0.00 2.57
4199 15059 2.108168 GCCACACCAGGTCATCTAGTA 58.892 52.381 0.00 0.00 0.00 1.82
4200 15060 0.905357 GCCACACCAGGTCATCTAGT 59.095 55.000 0.00 0.00 0.00 2.57
4201 15061 0.179000 GGCCACACCAGGTCATCTAG 59.821 60.000 0.00 0.00 38.86 2.43
4202 15062 0.546507 TGGCCACACCAGGTCATCTA 60.547 55.000 0.00 0.00 46.36 1.98
4203 15063 1.847506 TGGCCACACCAGGTCATCT 60.848 57.895 0.00 0.00 46.36 2.90
4204 15064 2.756400 TGGCCACACCAGGTCATC 59.244 61.111 0.00 0.00 46.36 2.92
4218 15078 1.813862 TCAAGTACTTGTGCCAGTGGC 60.814 52.381 29.83 28.01 43.17 5.01
4219 15079 2.146342 CTCAAGTACTTGTGCCAGTGG 58.854 52.381 29.83 4.20 41.16 4.00
4220 15080 3.111853 TCTCAAGTACTTGTGCCAGTG 57.888 47.619 29.83 14.79 41.16 3.66
4221 15081 3.388024 TCTTCTCAAGTACTTGTGCCAGT 59.612 43.478 29.83 0.00 41.16 4.00
4222 15082 3.995199 TCTTCTCAAGTACTTGTGCCAG 58.005 45.455 29.83 24.17 41.16 4.85
4223 15083 4.569943 GATCTTCTCAAGTACTTGTGCCA 58.430 43.478 29.83 17.97 41.16 4.92
4224 15084 3.614616 CGATCTTCTCAAGTACTTGTGCC 59.385 47.826 29.83 15.33 41.16 5.01
4225 15085 4.238514 ACGATCTTCTCAAGTACTTGTGC 58.761 43.478 29.83 15.69 41.16 4.57
4226 15086 6.771188 AAACGATCTTCTCAAGTACTTGTG 57.229 37.500 29.83 27.32 41.16 3.33
4227 15087 6.144080 CGAAAACGATCTTCTCAAGTACTTGT 59.856 38.462 29.83 13.68 41.16 3.16
4228 15088 6.144080 ACGAAAACGATCTTCTCAAGTACTTG 59.856 38.462 26.60 26.60 41.71 3.16
4229 15089 6.214399 ACGAAAACGATCTTCTCAAGTACTT 58.786 36.000 1.12 1.12 0.00 2.24
4230 15090 5.770417 ACGAAAACGATCTTCTCAAGTACT 58.230 37.500 0.00 0.00 0.00 2.73
4231 15091 6.143438 TGAACGAAAACGATCTTCTCAAGTAC 59.857 38.462 0.00 0.00 0.00 2.73
4232 15092 6.210796 TGAACGAAAACGATCTTCTCAAGTA 58.789 36.000 0.00 0.00 0.00 2.24
4233 15093 5.047847 TGAACGAAAACGATCTTCTCAAGT 58.952 37.500 0.00 0.00 0.00 3.16
4234 15094 5.576337 TGAACGAAAACGATCTTCTCAAG 57.424 39.130 0.00 0.00 0.00 3.02
4235 15095 6.539649 AATGAACGAAAACGATCTTCTCAA 57.460 33.333 0.00 0.00 0.00 3.02
4236 15096 7.827819 ATAATGAACGAAAACGATCTTCTCA 57.172 32.000 0.00 0.00 0.00 3.27
4237 15097 9.836739 CTAATAATGAACGAAAACGATCTTCTC 57.163 33.333 0.00 0.00 0.00 2.87
4238 15098 9.367444 ACTAATAATGAACGAAAACGATCTTCT 57.633 29.630 0.00 0.00 0.00 2.85
4239 15099 9.968743 AACTAATAATGAACGAAAACGATCTTC 57.031 29.630 0.00 0.00 0.00 2.87
4240 15100 9.968743 GAACTAATAATGAACGAAAACGATCTT 57.031 29.630 0.00 0.00 0.00 2.40
4241 15101 9.367444 AGAACTAATAATGAACGAAAACGATCT 57.633 29.630 0.00 0.00 0.00 2.75
4261 15121 9.535170 CCTGGACATATAGGAAAGATAGAACTA 57.465 37.037 0.00 0.00 36.11 2.24
4262 15122 8.013667 ACCTGGACATATAGGAAAGATAGAACT 58.986 37.037 0.00 0.00 37.52 3.01
4263 15123 8.196378 ACCTGGACATATAGGAAAGATAGAAC 57.804 38.462 0.00 0.00 37.52 3.01
4267 15127 9.837681 TCAATACCTGGACATATAGGAAAGATA 57.162 33.333 0.00 0.00 37.52 1.98
4268 15128 8.742125 TCAATACCTGGACATATAGGAAAGAT 57.258 34.615 0.00 0.00 37.52 2.40
4269 15129 8.561536 TTCAATACCTGGACATATAGGAAAGA 57.438 34.615 0.00 0.00 37.52 2.52
4270 15130 9.627123 TTTTCAATACCTGGACATATAGGAAAG 57.373 33.333 0.00 0.00 37.52 2.62
4280 15140 8.250332 GCAGATAAAATTTTCAATACCTGGACA 58.750 33.333 6.72 0.00 0.00 4.02
4281 15141 7.706607 GGCAGATAAAATTTTCAATACCTGGAC 59.293 37.037 6.72 0.00 0.00 4.02
4282 15142 7.619302 AGGCAGATAAAATTTTCAATACCTGGA 59.381 33.333 6.72 0.00 0.00 3.86
4283 15143 7.785033 AGGCAGATAAAATTTTCAATACCTGG 58.215 34.615 6.72 0.00 0.00 4.45
4284 15144 8.469200 TGAGGCAGATAAAATTTTCAATACCTG 58.531 33.333 6.72 7.90 0.00 4.00
4285 15145 8.593945 TGAGGCAGATAAAATTTTCAATACCT 57.406 30.769 6.72 10.13 0.00 3.08
4286 15146 7.922811 CCTGAGGCAGATAAAATTTTCAATACC 59.077 37.037 6.72 5.50 32.44 2.73
4287 15147 8.862550 CCTGAGGCAGATAAAATTTTCAATAC 57.137 34.615 6.72 0.00 32.44 1.89
4306 15166 1.003839 TGCGGTTACTTGCCTGAGG 60.004 57.895 0.00 0.00 0.00 3.86
4307 15167 1.639298 GCTGCGGTTACTTGCCTGAG 61.639 60.000 0.00 0.00 0.00 3.35
4308 15168 1.671054 GCTGCGGTTACTTGCCTGA 60.671 57.895 0.00 0.00 0.00 3.86
4309 15169 0.391130 TAGCTGCGGTTACTTGCCTG 60.391 55.000 0.00 0.00 0.00 4.85
4310 15170 0.391263 GTAGCTGCGGTTACTTGCCT 60.391 55.000 11.94 0.00 0.00 4.75
4311 15171 0.391263 AGTAGCTGCGGTTACTTGCC 60.391 55.000 15.65 0.00 36.33 4.52
4312 15172 1.439679 AAGTAGCTGCGGTTACTTGC 58.560 50.000 27.85 0.76 44.05 4.01
4314 15174 1.346722 ACCAAGTAGCTGCGGTTACTT 59.653 47.619 24.38 24.38 45.71 2.24
4315 15175 0.974383 ACCAAGTAGCTGCGGTTACT 59.026 50.000 15.65 15.65 40.37 2.24
4316 15176 1.804601 AACCAAGTAGCTGCGGTTAC 58.195 50.000 11.32 11.32 39.94 2.50
4317 15177 2.354003 GGTAACCAAGTAGCTGCGGTTA 60.354 50.000 14.38 14.38 41.82 2.85
4318 15178 1.609841 GGTAACCAAGTAGCTGCGGTT 60.610 52.381 16.05 16.05 43.92 4.44
4319 15179 0.036671 GGTAACCAAGTAGCTGCGGT 60.037 55.000 0.00 0.00 0.00 5.68
4320 15180 0.249398 AGGTAACCAAGTAGCTGCGG 59.751 55.000 0.00 0.00 30.73 5.69
4321 15181 2.094762 AAGGTAACCAAGTAGCTGCG 57.905 50.000 0.00 0.00 32.26 5.18
4322 15182 4.575236 GGAATAAGGTAACCAAGTAGCTGC 59.425 45.833 0.00 0.00 32.26 5.25
4323 15183 5.990668 AGGAATAAGGTAACCAAGTAGCTG 58.009 41.667 0.00 0.00 32.26 4.24
4324 15184 7.567622 TCATAGGAATAAGGTAACCAAGTAGCT 59.432 37.037 0.00 0.00 33.26 3.32
4325 15185 7.732996 TCATAGGAATAAGGTAACCAAGTAGC 58.267 38.462 0.00 0.00 37.17 3.58
4328 15188 9.408648 CATTTCATAGGAATAAGGTAACCAAGT 57.591 33.333 0.00 0.00 31.93 3.16
4329 15189 8.352942 GCATTTCATAGGAATAAGGTAACCAAG 58.647 37.037 0.00 0.00 31.93 3.61
4330 15190 7.836685 TGCATTTCATAGGAATAAGGTAACCAA 59.163 33.333 0.00 0.00 31.93 3.67
4331 15191 7.284489 GTGCATTTCATAGGAATAAGGTAACCA 59.716 37.037 0.00 0.00 31.93 3.67
4332 15192 7.284489 TGTGCATTTCATAGGAATAAGGTAACC 59.716 37.037 0.00 0.00 31.93 2.85
4333 15193 8.129211 GTGTGCATTTCATAGGAATAAGGTAAC 58.871 37.037 0.00 0.00 31.93 2.50
4334 15194 7.831690 TGTGTGCATTTCATAGGAATAAGGTAA 59.168 33.333 0.00 0.00 31.93 2.85
4335 15195 7.342581 TGTGTGCATTTCATAGGAATAAGGTA 58.657 34.615 0.00 0.00 31.93 3.08
4336 15196 6.186957 TGTGTGCATTTCATAGGAATAAGGT 58.813 36.000 0.00 0.00 31.93 3.50
4337 15197 6.698008 TGTGTGCATTTCATAGGAATAAGG 57.302 37.500 0.00 0.00 31.93 2.69
4338 15198 7.588854 CGATTGTGTGCATTTCATAGGAATAAG 59.411 37.037 0.00 0.00 31.93 1.73
4339 15199 7.416817 CGATTGTGTGCATTTCATAGGAATAA 58.583 34.615 0.00 0.00 31.93 1.40
4340 15200 6.017192 CCGATTGTGTGCATTTCATAGGAATA 60.017 38.462 0.00 0.00 31.93 1.75
4341 15201 5.221106 CCGATTGTGTGCATTTCATAGGAAT 60.221 40.000 0.00 0.00 31.93 3.01
4342 15202 4.096231 CCGATTGTGTGCATTTCATAGGAA 59.904 41.667 0.00 0.00 0.00 3.36
4343 15203 3.627123 CCGATTGTGTGCATTTCATAGGA 59.373 43.478 0.00 0.00 0.00 2.94
4344 15204 3.627123 TCCGATTGTGTGCATTTCATAGG 59.373 43.478 0.00 0.00 0.00 2.57
4345 15205 4.094739 TGTCCGATTGTGTGCATTTCATAG 59.905 41.667 0.00 0.00 0.00 2.23
4346 15206 4.006319 TGTCCGATTGTGTGCATTTCATA 58.994 39.130 0.00 0.00 0.00 2.15
4347 15207 2.819019 TGTCCGATTGTGTGCATTTCAT 59.181 40.909 0.00 0.00 0.00 2.57
4348 15208 2.225467 TGTCCGATTGTGTGCATTTCA 58.775 42.857 0.00 0.00 0.00 2.69
4349 15209 2.987413 TGTCCGATTGTGTGCATTTC 57.013 45.000 0.00 0.00 0.00 2.17
4350 15210 2.671914 GCATGTCCGATTGTGTGCATTT 60.672 45.455 0.00 0.00 33.09 2.32
4351 15211 1.135315 GCATGTCCGATTGTGTGCATT 60.135 47.619 0.00 0.00 33.09 3.56
4352 15212 0.452987 GCATGTCCGATTGTGTGCAT 59.547 50.000 0.00 0.00 33.09 3.96
4353 15213 0.606130 AGCATGTCCGATTGTGTGCA 60.606 50.000 0.00 0.00 35.17 4.57
4354 15214 0.097674 GAGCATGTCCGATTGTGTGC 59.902 55.000 0.00 0.00 0.00 4.57
4355 15215 1.129251 GTGAGCATGTCCGATTGTGTG 59.871 52.381 0.00 0.00 0.00 3.82
4356 15216 1.442769 GTGAGCATGTCCGATTGTGT 58.557 50.000 0.00 0.00 0.00 3.72
4357 15217 0.371301 CGTGAGCATGTCCGATTGTG 59.629 55.000 0.00 0.00 0.00 3.33
4358 15218 0.246360 TCGTGAGCATGTCCGATTGT 59.754 50.000 0.00 0.00 0.00 2.71
4359 15219 1.259770 CATCGTGAGCATGTCCGATTG 59.740 52.381 13.43 9.11 36.82 2.67
4360 15220 1.134699 ACATCGTGAGCATGTCCGATT 60.135 47.619 13.43 7.57 36.82 3.34
4361 15221 0.461548 ACATCGTGAGCATGTCCGAT 59.538 50.000 0.00 5.48 38.41 4.18
4362 15222 0.246360 AACATCGTGAGCATGTCCGA 59.754 50.000 0.00 3.53 33.06 4.55
4363 15223 0.647410 GAACATCGTGAGCATGTCCG 59.353 55.000 0.00 0.00 33.06 4.79
4364 15224 2.015736 AGAACATCGTGAGCATGTCC 57.984 50.000 0.00 0.00 33.06 4.02
4365 15225 4.153986 CAAAAGAACATCGTGAGCATGTC 58.846 43.478 0.00 0.00 33.06 3.06
4366 15226 3.610114 GCAAAAGAACATCGTGAGCATGT 60.610 43.478 0.00 0.00 34.75 3.21
4367 15227 2.912967 GCAAAAGAACATCGTGAGCATG 59.087 45.455 0.00 0.00 0.00 4.06
4368 15228 2.095059 GGCAAAAGAACATCGTGAGCAT 60.095 45.455 0.00 0.00 0.00 3.79
4369 15229 1.266718 GGCAAAAGAACATCGTGAGCA 59.733 47.619 0.00 0.00 0.00 4.26
4370 15230 1.401539 GGGCAAAAGAACATCGTGAGC 60.402 52.381 0.00 0.00 0.00 4.26
4371 15231 2.095567 CAGGGCAAAAGAACATCGTGAG 60.096 50.000 0.00 0.00 0.00 3.51
4372 15232 1.879380 CAGGGCAAAAGAACATCGTGA 59.121 47.619 0.00 0.00 0.00 4.35
4373 15233 1.608590 ACAGGGCAAAAGAACATCGTG 59.391 47.619 0.00 0.00 0.00 4.35
4374 15234 1.880027 GACAGGGCAAAAGAACATCGT 59.120 47.619 0.00 0.00 0.00 3.73
4375 15235 1.879380 TGACAGGGCAAAAGAACATCG 59.121 47.619 0.00 0.00 0.00 3.84
4376 15236 5.841957 ATATGACAGGGCAAAAGAACATC 57.158 39.130 0.00 0.00 0.00 3.06
4377 15237 5.716228 TGAATATGACAGGGCAAAAGAACAT 59.284 36.000 0.00 0.00 0.00 2.71
4378 15238 5.048083 GTGAATATGACAGGGCAAAAGAACA 60.048 40.000 0.00 0.00 0.00 3.18
4379 15239 5.048083 TGTGAATATGACAGGGCAAAAGAAC 60.048 40.000 0.00 0.00 0.00 3.01
4380 15240 5.076182 TGTGAATATGACAGGGCAAAAGAA 58.924 37.500 0.00 0.00 0.00 2.52
4381 15241 4.661222 TGTGAATATGACAGGGCAAAAGA 58.339 39.130 0.00 0.00 0.00 2.52
4382 15242 5.389859 TTGTGAATATGACAGGGCAAAAG 57.610 39.130 0.00 0.00 0.00 2.27
4383 15243 5.798125 TTTGTGAATATGACAGGGCAAAA 57.202 34.783 0.00 0.00 0.00 2.44
4384 15244 5.510520 GGTTTTGTGAATATGACAGGGCAAA 60.511 40.000 0.00 0.00 0.00 3.68
4385 15245 4.021544 GGTTTTGTGAATATGACAGGGCAA 60.022 41.667 0.00 0.00 0.00 4.52
4386 15246 3.509575 GGTTTTGTGAATATGACAGGGCA 59.490 43.478 0.00 0.00 0.00 5.36
4387 15247 3.763897 AGGTTTTGTGAATATGACAGGGC 59.236 43.478 0.00 0.00 0.00 5.19
4388 15248 5.009631 TCAGGTTTTGTGAATATGACAGGG 58.990 41.667 0.00 0.00 0.00 4.45
4389 15249 5.473162 TGTCAGGTTTTGTGAATATGACAGG 59.527 40.000 1.25 0.00 40.27 4.00
4390 15250 6.558771 TGTCAGGTTTTGTGAATATGACAG 57.441 37.500 1.25 0.00 40.27 3.51
4391 15251 6.514870 GCTTGTCAGGTTTTGTGAATATGACA 60.515 38.462 1.25 1.25 42.60 3.58
4392 15252 5.858581 GCTTGTCAGGTTTTGTGAATATGAC 59.141 40.000 0.00 0.00 36.87 3.06
4393 15253 5.769662 AGCTTGTCAGGTTTTGTGAATATGA 59.230 36.000 0.00 0.00 0.00 2.15
4394 15254 6.017400 AGCTTGTCAGGTTTTGTGAATATG 57.983 37.500 0.00 0.00 0.00 1.78
4395 15255 5.769662 TGAGCTTGTCAGGTTTTGTGAATAT 59.230 36.000 0.00 0.00 0.00 1.28
4396 15256 5.008613 GTGAGCTTGTCAGGTTTTGTGAATA 59.991 40.000 0.00 0.00 35.13 1.75
4397 15257 3.953612 TGAGCTTGTCAGGTTTTGTGAAT 59.046 39.130 0.00 0.00 0.00 2.57
4398 15258 3.128589 GTGAGCTTGTCAGGTTTTGTGAA 59.871 43.478 0.00 0.00 35.13 3.18
4399 15259 2.682856 GTGAGCTTGTCAGGTTTTGTGA 59.317 45.455 0.00 0.00 35.13 3.58
4400 15260 2.423185 TGTGAGCTTGTCAGGTTTTGTG 59.577 45.455 0.00 0.00 35.13 3.33
4401 15261 2.423538 GTGTGAGCTTGTCAGGTTTTGT 59.576 45.455 0.00 0.00 35.13 2.83
4402 15262 2.684881 AGTGTGAGCTTGTCAGGTTTTG 59.315 45.455 0.00 0.00 35.13 2.44
4403 15263 2.684881 CAGTGTGAGCTTGTCAGGTTTT 59.315 45.455 0.00 0.00 35.13 2.43
4404 15264 2.292267 CAGTGTGAGCTTGTCAGGTTT 58.708 47.619 0.00 0.00 35.13 3.27
4405 15265 1.210478 ACAGTGTGAGCTTGTCAGGTT 59.790 47.619 0.00 0.00 35.13 3.50
4406 15266 0.833287 ACAGTGTGAGCTTGTCAGGT 59.167 50.000 0.00 0.00 35.13 4.00
4407 15267 1.869767 GAACAGTGTGAGCTTGTCAGG 59.130 52.381 0.00 0.00 35.13 3.86
4408 15268 2.543012 CAGAACAGTGTGAGCTTGTCAG 59.457 50.000 0.00 0.00 35.13 3.51
4409 15269 2.554142 CAGAACAGTGTGAGCTTGTCA 58.446 47.619 0.00 0.00 0.00 3.58
4410 15270 1.869767 CCAGAACAGTGTGAGCTTGTC 59.130 52.381 0.00 0.00 0.00 3.18
4411 15271 1.475751 CCCAGAACAGTGTGAGCTTGT 60.476 52.381 0.00 0.00 0.00 3.16
4412 15272 1.233019 CCCAGAACAGTGTGAGCTTG 58.767 55.000 0.00 0.00 0.00 4.01
4413 15273 0.839946 ACCCAGAACAGTGTGAGCTT 59.160 50.000 0.00 0.00 0.00 3.74
4414 15274 0.107456 CACCCAGAACAGTGTGAGCT 59.893 55.000 0.00 0.00 0.00 4.09
4415 15275 0.106708 TCACCCAGAACAGTGTGAGC 59.893 55.000 0.00 0.00 33.09 4.26
4416 15276 2.420642 CATCACCCAGAACAGTGTGAG 58.579 52.381 0.00 0.00 40.70 3.51
4417 15277 1.072173 CCATCACCCAGAACAGTGTGA 59.928 52.381 0.00 0.00 41.52 3.58
4418 15278 1.202806 ACCATCACCCAGAACAGTGTG 60.203 52.381 0.00 0.00 35.45 3.82
4419 15279 1.140312 ACCATCACCCAGAACAGTGT 58.860 50.000 0.00 0.00 35.45 3.55
4420 15280 3.417069 TTACCATCACCCAGAACAGTG 57.583 47.619 0.00 0.00 35.24 3.66
4421 15281 5.975988 ATATTACCATCACCCAGAACAGT 57.024 39.130 0.00 0.00 0.00 3.55
4422 15282 5.009010 GCAATATTACCATCACCCAGAACAG 59.991 44.000 0.00 0.00 0.00 3.16
4423 15283 4.887071 GCAATATTACCATCACCCAGAACA 59.113 41.667 0.00 0.00 0.00 3.18
4424 15284 4.278419 GGCAATATTACCATCACCCAGAAC 59.722 45.833 0.00 0.00 0.00 3.01
4425 15285 4.079500 TGGCAATATTACCATCACCCAGAA 60.080 41.667 3.05 0.00 0.00 3.02
4426 15286 3.461458 TGGCAATATTACCATCACCCAGA 59.539 43.478 3.05 0.00 0.00 3.86
4427 15287 3.831323 TGGCAATATTACCATCACCCAG 58.169 45.455 3.05 0.00 0.00 4.45
4428 15288 3.961484 TGGCAATATTACCATCACCCA 57.039 42.857 3.05 0.00 0.00 4.51
4429 15289 3.511146 CCATGGCAATATTACCATCACCC 59.489 47.826 16.13 0.00 44.97 4.61
4430 15290 3.511146 CCCATGGCAATATTACCATCACC 59.489 47.826 16.13 0.00 44.97 4.02
4431 15291 4.789012 CCCATGGCAATATTACCATCAC 57.211 45.455 16.13 0.00 44.97 3.06
4444 15304 5.805077 ATCTTGGAAGATTGCCCATGGCA 62.805 47.826 6.09 3.13 46.26 4.92
4445 15305 3.282036 ATCTTGGAAGATTGCCCATGGC 61.282 50.000 6.09 2.35 42.96 4.40
4446 15306 2.148446 TCTTGGAAGATTGCCCATGG 57.852 50.000 4.14 4.14 31.66 3.66
4472 15332 7.497249 GCAAGGTGATCTAGAAATGTAGAACAT 59.503 37.037 0.00 0.00 41.31 2.71
4473 15333 6.818644 GCAAGGTGATCTAGAAATGTAGAACA 59.181 38.462 0.00 0.00 32.72 3.18
4474 15334 6.818644 TGCAAGGTGATCTAGAAATGTAGAAC 59.181 38.462 0.00 0.00 32.72 3.01
4475 15335 6.818644 GTGCAAGGTGATCTAGAAATGTAGAA 59.181 38.462 0.00 0.00 32.72 2.10
4476 15336 6.341316 GTGCAAGGTGATCTAGAAATGTAGA 58.659 40.000 0.00 0.00 33.52 2.59
4477 15337 5.525378 GGTGCAAGGTGATCTAGAAATGTAG 59.475 44.000 0.00 0.00 0.00 2.74
4478 15338 5.045942 TGGTGCAAGGTGATCTAGAAATGTA 60.046 40.000 0.00 0.00 0.00 2.29
4479 15339 4.263462 TGGTGCAAGGTGATCTAGAAATGT 60.263 41.667 0.00 0.00 0.00 2.71
4480 15340 4.264253 TGGTGCAAGGTGATCTAGAAATG 58.736 43.478 0.00 0.00 0.00 2.32
4481 15341 4.574674 TGGTGCAAGGTGATCTAGAAAT 57.425 40.909 0.00 0.00 0.00 2.17
4482 15342 4.264253 CATGGTGCAAGGTGATCTAGAAA 58.736 43.478 0.00 0.00 0.00 2.52
4483 15343 3.370846 CCATGGTGCAAGGTGATCTAGAA 60.371 47.826 2.57 0.00 0.00 2.10
4484 15344 2.171237 CCATGGTGCAAGGTGATCTAGA 59.829 50.000 2.57 0.00 0.00 2.43
4485 15345 2.569059 CCATGGTGCAAGGTGATCTAG 58.431 52.381 2.57 0.00 0.00 2.43
4486 15346 1.212688 CCCATGGTGCAAGGTGATCTA 59.787 52.381 11.73 0.00 0.00 1.98
4487 15347 0.033796 CCCATGGTGCAAGGTGATCT 60.034 55.000 11.73 0.00 0.00 2.75
4488 15348 1.669999 GCCCATGGTGCAAGGTGATC 61.670 60.000 17.38 0.00 0.00 2.92
4489 15349 1.683365 GCCCATGGTGCAAGGTGAT 60.683 57.895 17.38 0.00 0.00 3.06
4490 15350 2.283101 GCCCATGGTGCAAGGTGA 60.283 61.111 17.38 0.00 0.00 4.02
4491 15351 2.208619 TTGCCCATGGTGCAAGGTG 61.209 57.895 27.00 6.32 43.36 4.00
4492 15352 2.200930 TTGCCCATGGTGCAAGGT 59.799 55.556 27.00 0.00 43.36 3.50
4495 15355 2.506061 GGTGTTGCCCATGGTGCAA 61.506 57.895 27.00 27.00 45.83 4.08
4496 15356 2.916703 GGTGTTGCCCATGGTGCA 60.917 61.111 20.10 20.10 36.84 4.57
4497 15357 2.601367 AGGTGTTGCCCATGGTGC 60.601 61.111 11.73 14.22 38.26 5.01
4498 15358 3.368822 CAGGTGTTGCCCATGGTG 58.631 61.111 11.73 3.26 38.26 4.17
4507 15367 0.738389 AACCAGAAACGCAGGTGTTG 59.262 50.000 0.00 0.00 36.38 3.33
4508 15368 1.021968 GAACCAGAAACGCAGGTGTT 58.978 50.000 0.00 0.00 36.38 3.32
4509 15369 1.157870 CGAACCAGAAACGCAGGTGT 61.158 55.000 0.00 0.00 36.38 4.16
4510 15370 1.569493 CGAACCAGAAACGCAGGTG 59.431 57.895 0.00 0.00 36.38 4.00
4511 15371 1.597027 CCGAACCAGAAACGCAGGT 60.597 57.895 0.00 0.00 38.13 4.00
4512 15372 2.325082 CCCGAACCAGAAACGCAGG 61.325 63.158 0.00 0.00 0.00 4.85
4513 15373 0.673644 ATCCCGAACCAGAAACGCAG 60.674 55.000 0.00 0.00 0.00 5.18
4514 15374 0.953471 CATCCCGAACCAGAAACGCA 60.953 55.000 0.00 0.00 0.00 5.24
4515 15375 0.953960 ACATCCCGAACCAGAAACGC 60.954 55.000 0.00 0.00 0.00 4.84
4516 15376 2.373540 TACATCCCGAACCAGAAACG 57.626 50.000 0.00 0.00 0.00 3.60
4517 15377 3.374058 CACATACATCCCGAACCAGAAAC 59.626 47.826 0.00 0.00 0.00 2.78
4518 15378 3.008594 ACACATACATCCCGAACCAGAAA 59.991 43.478 0.00 0.00 0.00 2.52
4519 15379 2.569853 ACACATACATCCCGAACCAGAA 59.430 45.455 0.00 0.00 0.00 3.02
4520 15380 2.184533 ACACATACATCCCGAACCAGA 58.815 47.619 0.00 0.00 0.00 3.86
4521 15381 2.691409 ACACATACATCCCGAACCAG 57.309 50.000 0.00 0.00 0.00 4.00
4522 15382 6.428083 AATATACACATACATCCCGAACCA 57.572 37.500 0.00 0.00 0.00 3.67
4523 15383 8.879759 CATAAATATACACATACATCCCGAACC 58.120 37.037 0.00 0.00 0.00 3.62
4524 15384 8.388103 GCATAAATATACACATACATCCCGAAC 58.612 37.037 0.00 0.00 0.00 3.95
4525 15385 7.276878 CGCATAAATATACACATACATCCCGAA 59.723 37.037 0.00 0.00 0.00 4.30
4526 15386 6.754675 CGCATAAATATACACATACATCCCGA 59.245 38.462 0.00 0.00 0.00 5.14
4527 15387 6.533723 ACGCATAAATATACACATACATCCCG 59.466 38.462 0.00 0.00 0.00 5.14
4528 15388 7.333423 ACACGCATAAATATACACATACATCCC 59.667 37.037 0.00 0.00 0.00 3.85
4529 15389 8.251750 ACACGCATAAATATACACATACATCC 57.748 34.615 0.00 0.00 0.00 3.51
4547 15407 9.398170 GCAAAGATTATTATGAATTACACGCAT 57.602 29.630 0.00 0.00 0.00 4.73
4548 15408 7.860373 GGCAAAGATTATTATGAATTACACGCA 59.140 33.333 0.00 0.00 0.00 5.24
4549 15409 7.860373 TGGCAAAGATTATTATGAATTACACGC 59.140 33.333 0.00 0.00 0.00 5.34
4550 15410 9.729023 TTGGCAAAGATTATTATGAATTACACG 57.271 29.630 0.00 0.00 0.00 4.49
4562 15422 8.949177 GGAAATGACAAATTGGCAAAGATTATT 58.051 29.630 5.29 0.00 39.86 1.40
4563 15423 8.102047 TGGAAATGACAAATTGGCAAAGATTAT 58.898 29.630 5.29 0.00 39.86 1.28
4564 15424 7.448420 TGGAAATGACAAATTGGCAAAGATTA 58.552 30.769 5.29 0.00 39.86 1.75
4565 15425 6.297582 TGGAAATGACAAATTGGCAAAGATT 58.702 32.000 5.29 0.00 39.86 2.40
4566 15426 5.867330 TGGAAATGACAAATTGGCAAAGAT 58.133 33.333 5.29 0.00 39.86 2.40
4567 15427 5.287674 TGGAAATGACAAATTGGCAAAGA 57.712 34.783 5.29 0.00 39.86 2.52
4568 15428 6.374565 TTTGGAAATGACAAATTGGCAAAG 57.625 33.333 5.29 0.00 39.86 2.77
4569 15429 6.956202 ATTTGGAAATGACAAATTGGCAAA 57.044 29.167 5.29 0.00 39.86 3.68
4577 15437 6.401394 TGACACACAATTTGGAAATGACAAA 58.599 32.000 0.78 0.00 41.50 2.83
4578 15438 5.970592 TGACACACAATTTGGAAATGACAA 58.029 33.333 0.78 0.00 0.00 3.18
4579 15439 5.126869 ACTGACACACAATTTGGAAATGACA 59.873 36.000 0.78 0.33 0.00 3.58
4580 15440 5.459762 CACTGACACACAATTTGGAAATGAC 59.540 40.000 0.78 0.00 0.00 3.06
4581 15441 5.359292 TCACTGACACACAATTTGGAAATGA 59.641 36.000 0.78 0.00 0.00 2.57
4582 15442 5.590145 TCACTGACACACAATTTGGAAATG 58.410 37.500 0.78 0.00 0.00 2.32
4583 15443 5.850557 TCACTGACACACAATTTGGAAAT 57.149 34.783 0.78 0.00 0.00 2.17
4584 15444 5.590145 CATCACTGACACACAATTTGGAAA 58.410 37.500 0.78 0.00 0.00 3.13
4585 15445 4.499526 GCATCACTGACACACAATTTGGAA 60.500 41.667 0.78 0.00 0.00 3.53
4586 15446 3.004629 GCATCACTGACACACAATTTGGA 59.995 43.478 0.78 0.00 0.00 3.53
4587 15447 3.243468 TGCATCACTGACACACAATTTGG 60.243 43.478 0.78 0.00 0.00 3.28
4588 15448 3.732219 GTGCATCACTGACACACAATTTG 59.268 43.478 7.94 0.00 32.84 2.32
4589 15449 3.548616 CGTGCATCACTGACACACAATTT 60.549 43.478 11.80 0.00 32.41 1.82
4590 15450 2.031769 CGTGCATCACTGACACACAATT 60.032 45.455 11.80 0.00 32.41 2.32
4591 15451 1.532437 CGTGCATCACTGACACACAAT 59.468 47.619 11.80 0.00 32.41 2.71
4592 15452 0.936600 CGTGCATCACTGACACACAA 59.063 50.000 11.80 0.00 32.41 3.33
4593 15453 0.879839 CCGTGCATCACTGACACACA 60.880 55.000 11.80 0.00 32.41 3.72
4594 15454 1.568612 CCCGTGCATCACTGACACAC 61.569 60.000 0.00 3.98 32.41 3.82
4595 15455 1.301637 CCCGTGCATCACTGACACA 60.302 57.895 0.00 0.00 32.41 3.72
4615 15475 3.447944 GGTCTCGATCTTCAGTACCCTTT 59.552 47.826 0.00 0.00 0.00 3.11
4634 15494 2.130073 GAACCTGTTGCCGCTTGGTC 62.130 60.000 0.00 0.00 34.16 4.02
4696 15556 1.073199 CCCACTCGAAGCCTTGGTT 59.927 57.895 0.00 0.00 0.00 3.67
4725 15585 3.228017 TCGTGGTTCGAGTGGGCA 61.228 61.111 0.00 0.00 44.01 5.36
4740 15600 1.084370 GTTCCATCTGGGCTTCGTCG 61.084 60.000 0.00 0.00 36.21 5.12
4867 15733 1.198759 TTTCCTCCCAACCTCCCTCG 61.199 60.000 0.00 0.00 0.00 4.63
4889 15755 1.416243 ATGGGGAATTCGGTAGCGTA 58.584 50.000 14.79 4.96 0.00 4.42
4974 15841 4.021925 GGGAAGCGCCAGGACAGT 62.022 66.667 2.29 0.00 38.95 3.55
4976 15843 3.565214 TTGGGAAGCGCCAGGACA 61.565 61.111 2.29 0.00 38.95 4.02
5037 15905 0.820226 CTCCGACAGCTTCTCCATCA 59.180 55.000 0.00 0.00 0.00 3.07
5158 16026 5.336055 GGTCGTGGTATTCATAGAGATCAGG 60.336 48.000 0.00 0.00 0.00 3.86
5169 16037 0.813184 GTCGAGGGTCGTGGTATTCA 59.187 55.000 0.00 0.00 41.35 2.57
5248 16119 4.814294 GACTGGTCGCCGCGGATT 62.814 66.667 33.48 0.00 0.00 3.01
5280 16151 2.554142 GTGATGGATCTTCATGTCGCA 58.446 47.619 0.00 0.00 0.00 5.10
5407 16279 2.113433 GGACTCTCGCGCACCTCTA 61.113 63.158 8.75 0.00 0.00 2.43
5443 16315 2.418910 CGACTCACGGCCCAGAGAT 61.419 63.158 22.19 9.23 38.46 2.75
5577 16450 3.058846 CCATCGATGAGTAGGAGTACACG 60.059 52.174 26.86 0.56 0.00 4.49
5671 16855 2.664402 ATTCAGACCAACTTGCCTGT 57.336 45.000 8.40 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.