Multiple sequence alignment - TraesCS6D01G378900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G378900 chr6D 100.000 3201 0 0 1 3201 460790387 460793587 0.000000e+00 5912.0
1 TraesCS6D01G378900 chr6D 83.168 303 43 4 2534 2834 460790870 460791166 1.460000e-68 270.0
2 TraesCS6D01G378900 chr6D 83.168 303 43 4 484 780 460792920 460793220 1.460000e-68 270.0
3 TraesCS6D01G378900 chr6A 89.487 1617 131 26 774 2375 607057430 607059022 0.000000e+00 2008.0
4 TraesCS6D01G378900 chr6A 91.173 793 56 8 1 785 607056616 607057402 0.000000e+00 1064.0
5 TraesCS6D01G378900 chr6A 84.593 344 45 7 2529 2871 607057097 607057433 5.120000e-88 335.0
6 TraesCS6D01G378900 chr6A 87.629 97 11 1 2378 2474 607059077 607059172 9.390000e-21 111.0
7 TraesCS6D01G378900 chr6A 88.889 63 5 1 3127 3187 608281107 608281045 3.420000e-10 76.8
8 TraesCS6D01G378900 chr6B 89.336 994 76 20 774 1763 702246054 702247021 0.000000e+00 1221.0
9 TraesCS6D01G378900 chr6B 91.310 794 56 8 1 785 702245236 702246025 0.000000e+00 1072.0
10 TraesCS6D01G378900 chr6B 87.308 717 69 13 1742 2448 702247033 702247737 0.000000e+00 800.0
11 TraesCS6D01G378900 chr6B 84.971 346 44 7 2529 2871 702245717 702246057 8.500000e-91 344.0
12 TraesCS6D01G378900 chr6B 89.388 245 22 4 2646 2889 702248199 702248440 4.010000e-79 305.0
13 TraesCS6D01G378900 chr6B 91.096 146 12 1 2378 2523 702247772 702247916 2.520000e-46 196.0
14 TraesCS6D01G378900 chr6B 85.806 155 21 1 211 364 702247951 702248105 2.560000e-36 163.0
15 TraesCS6D01G378900 chr3B 90.345 435 35 5 1 433 739118164 739117735 5.990000e-157 564.0
16 TraesCS6D01G378900 chr3B 90.115 435 36 5 1 433 13127298 13127727 2.790000e-155 558.0
17 TraesCS6D01G378900 chr3B 82.069 290 43 6 1037 1325 13127819 13128100 4.130000e-59 239.0
18 TraesCS6D01G378900 chr3B 82.353 289 38 9 1040 1325 739117639 739117361 4.130000e-59 239.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G378900 chr6D 460790387 460793587 3200 False 2150.666667 5912 88.778667 1 3201 3 chr6D.!!$F1 3200
1 TraesCS6D01G378900 chr6A 607056616 607059172 2556 False 879.500000 2008 88.220500 1 2871 4 chr6A.!!$F1 2870
2 TraesCS6D01G378900 chr6B 702245236 702248440 3204 False 585.857143 1221 88.459286 1 2889 7 chr6B.!!$F1 2888
3 TraesCS6D01G378900 chr3B 739117361 739118164 803 True 401.500000 564 86.349000 1 1325 2 chr3B.!!$R1 1324
4 TraesCS6D01G378900 chr3B 13127298 13128100 802 False 398.500000 558 86.092000 1 1325 2 chr3B.!!$F1 1324

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
423 425 1.624336 TCTCAAATTGCAGGCAAGCT 58.376 45.0 12.66 0.00 39.47 3.74 F
1145 1196 0.317020 GCAACGTGTCCAAGACTTGC 60.317 55.0 9.85 4.95 35.36 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1802 1886 0.254178 AATGGGTAGCTCAGCAGGTG 59.746 55.0 0.0 0.0 0.00 4.00 R
3056 3503 0.034186 CAGCCCACCTGCCTAATTCA 60.034 55.0 0.0 0.0 34.21 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
162 163 3.133721 ACTGCTCCCAACATAGTGAGATC 59.866 47.826 0.00 0.00 0.00 2.75
184 185 2.286365 TTCTGTAGCCTTTGGGTTGG 57.714 50.000 0.00 0.00 34.28 3.77
197 198 6.593770 GCCTTTGGGTTGGTAAATTTATTCTG 59.406 38.462 0.31 0.00 34.45 3.02
207 209 8.288689 TGGTAAATTTATTCTGAGGCCTAAAC 57.711 34.615 4.42 0.00 0.00 2.01
230 232 7.151999 ACGCCAATAAAAATTGACAGTGATA 57.848 32.000 0.00 0.00 33.55 2.15
236 238 8.745837 CAATAAAAATTGACAGTGATATTCGGC 58.254 33.333 0.00 0.00 33.55 5.54
239 241 2.602257 TGACAGTGATATTCGGCTGG 57.398 50.000 0.00 0.00 33.62 4.85
245 247 2.072298 GTGATATTCGGCTGGATGCTC 58.928 52.381 0.00 0.00 42.39 4.26
256 258 2.349590 CTGGATGCTCGTTGTCATTCA 58.650 47.619 0.00 0.00 0.00 2.57
271 273 8.446273 CGTTGTCATTCATCTTTCAAGTATCTT 58.554 33.333 0.00 0.00 0.00 2.40
310 312 7.861372 GCAGAGATATTTGTTTGAATGATGGAG 59.139 37.037 0.00 0.00 0.00 3.86
406 408 4.585879 ACAAACTATGGCCGTTATGTTCT 58.414 39.130 0.77 0.00 0.00 3.01
423 425 1.624336 TCTCAAATTGCAGGCAAGCT 58.376 45.000 12.66 0.00 39.47 3.74
468 472 2.774007 GCAGTGCATGCGTAAAGTAAG 58.226 47.619 14.09 0.00 46.99 2.34
469 473 2.774007 CAGTGCATGCGTAAAGTAAGC 58.226 47.619 14.09 0.00 0.00 3.09
481 485 5.086058 CGTAAAGTAAGCATGCGTTCAAAT 58.914 37.500 12.39 0.00 0.00 2.32
517 521 6.765512 CCAAAACAATCCACCTGTTAAACATT 59.234 34.615 0.00 0.00 35.98 2.71
607 616 8.991783 AGAATCATATCTGAACATGGTCAATT 57.008 30.769 15.67 10.20 34.37 2.32
628 637 8.655092 TCAATTTGTTGTTAAACTGCAGAAAAG 58.345 29.630 23.35 4.75 37.19 2.27
634 643 9.213799 TGTTGTTAAACTGCAGAAAAGAAAATT 57.786 25.926 23.35 0.00 37.19 1.82
683 693 4.554973 GCTTGTTGCAATGACGAAATACTC 59.445 41.667 0.59 0.00 42.31 2.59
693 703 7.269297 GCAATGACGAAATACTCACTTTTCTTC 59.731 37.037 0.00 0.00 33.26 2.87
700 710 9.322776 CGAAATACTCACTTTTCTTCATCTTTG 57.677 33.333 0.00 0.00 31.20 2.77
794 842 7.757526 TGCATTTTATTGCGTTACTACTGATT 58.242 30.769 0.00 0.00 45.77 2.57
804 852 7.544622 TGCGTTACTACTGATTATCTGAAGTT 58.455 34.615 6.11 0.00 0.00 2.66
812 860 9.703892 CTACTGATTATCTGAAGTTAGATTGGG 57.296 37.037 6.11 0.00 38.35 4.12
813 861 6.995091 ACTGATTATCTGAAGTTAGATTGGGC 59.005 38.462 6.11 0.00 38.35 5.36
814 862 6.899089 TGATTATCTGAAGTTAGATTGGGCA 58.101 36.000 0.00 0.00 38.35 5.36
815 863 7.520798 TGATTATCTGAAGTTAGATTGGGCAT 58.479 34.615 0.00 0.00 38.35 4.40
816 864 7.446319 TGATTATCTGAAGTTAGATTGGGCATG 59.554 37.037 0.00 0.00 38.35 4.06
817 865 4.842531 TCTGAAGTTAGATTGGGCATGA 57.157 40.909 0.00 0.00 0.00 3.07
818 866 4.517285 TCTGAAGTTAGATTGGGCATGAC 58.483 43.478 0.00 0.00 0.00 3.06
819 867 4.225942 TCTGAAGTTAGATTGGGCATGACT 59.774 41.667 0.00 0.00 0.00 3.41
826 874 3.878778 AGATTGGGCATGACTGAACTAC 58.121 45.455 0.00 0.00 0.00 2.73
830 878 4.098914 TGGGCATGACTGAACTACTTTT 57.901 40.909 0.00 0.00 0.00 2.27
879 928 5.704515 ACAAGAATGTCAAGAAGGTGATGAG 59.295 40.000 0.00 0.00 33.41 2.90
921 971 1.757682 TCGTTTGTGCTCCACCTTTT 58.242 45.000 0.00 0.00 32.73 2.27
935 985 6.121776 TCCACCTTTTTGCTCTCTGTATAA 57.878 37.500 0.00 0.00 0.00 0.98
936 986 6.539173 TCCACCTTTTTGCTCTCTGTATAAA 58.461 36.000 0.00 0.00 0.00 1.40
965 1015 3.923461 CGATCACACTCTTTCTGGAGAAC 59.077 47.826 0.00 0.00 37.13 3.01
979 1029 2.894765 TGGAGAACCAAGTATCACGACA 59.105 45.455 0.00 0.00 43.91 4.35
1019 1069 7.665559 GGTCTAAATGATCATGGCAAAGGTATA 59.334 37.037 9.46 0.00 0.00 1.47
1038 1088 8.958119 AGGTATATTTTTCGAGCATCTAAACA 57.042 30.769 0.00 0.00 28.84 2.83
1119 1169 8.492673 TCTTATGAATATGTGACAGGAACAAC 57.507 34.615 0.00 0.00 0.00 3.32
1126 1177 3.270027 TGTGACAGGAACAACACAAGAG 58.730 45.455 0.00 0.00 39.70 2.85
1131 1182 1.670811 AGGAACAACACAAGAGCAACG 59.329 47.619 0.00 0.00 0.00 4.10
1136 1187 1.014352 AACACAAGAGCAACGTGTCC 58.986 50.000 0.00 0.00 42.85 4.02
1144 1195 1.261619 GAGCAACGTGTCCAAGACTTG 59.738 52.381 8.31 8.31 33.15 3.16
1145 1196 0.317020 GCAACGTGTCCAAGACTTGC 60.317 55.000 9.85 4.95 35.36 4.01
1157 1208 2.614057 CAAGACTTGCGTTCTGAAGGTT 59.386 45.455 11.27 0.00 0.00 3.50
1254 1305 7.707104 AGGTACATATGCAAGTTGCTTAAATC 58.293 34.615 27.17 14.92 45.31 2.17
1310 1361 9.598517 ACATCTGTTTTTATGTGTGATTTTTGT 57.401 25.926 0.00 0.00 35.06 2.83
1338 1389 2.340210 TCTGTTGCACTGCCTTTGTA 57.660 45.000 0.00 0.00 0.00 2.41
1364 1415 7.664552 ATGATCTAAATTTTGGCCTTCATGA 57.335 32.000 3.32 0.00 0.00 3.07
1368 1419 9.468532 GATCTAAATTTTGGCCTTCATGATTAC 57.531 33.333 3.32 0.00 0.00 1.89
1369 1420 8.359875 TCTAAATTTTGGCCTTCATGATTACA 57.640 30.769 3.32 0.00 0.00 2.41
1389 1440 2.367512 GGGGTGGAGAGGGCTGAT 60.368 66.667 0.00 0.00 0.00 2.90
1404 1455 1.269958 CTGATCTGGTGGTGGAGACA 58.730 55.000 0.00 0.00 38.70 3.41
1470 1521 3.550639 GCTGTTTGCTGCATGAACTAACA 60.551 43.478 15.77 14.35 39.07 2.41
1506 1557 4.243270 AGATAGAAACCGAAAGAACCGTG 58.757 43.478 0.00 0.00 0.00 4.94
1509 1560 1.262417 GAAACCGAAAGAACCGTGTCC 59.738 52.381 0.00 0.00 0.00 4.02
1531 1582 0.398318 AGGAGAAACTGCGGCTTCTT 59.602 50.000 12.35 0.00 32.01 2.52
1566 1617 0.393267 GCGTTGGCCAGGTACCATTA 60.393 55.000 15.94 0.00 36.96 1.90
1604 1655 4.503007 AGTCGATCGTCCATCAAAATTACG 59.497 41.667 15.94 0.00 34.99 3.18
1613 1664 8.547894 TCGTCCATCAAAATTACGATGATAAAG 58.452 33.333 15.30 6.28 41.28 1.85
1614 1665 8.547894 CGTCCATCAAAATTACGATGATAAAGA 58.452 33.333 15.30 4.57 41.28 2.52
1681 1732 0.613260 TGGCTGCTGTTAGATCGGTT 59.387 50.000 0.00 0.00 0.00 4.44
1694 1745 2.673368 AGATCGGTTGAGCATTCGTTTC 59.327 45.455 0.00 0.00 31.29 2.78
1718 1769 4.452455 GGTCCTATTGATGCAGTTATTCCG 59.548 45.833 0.00 0.00 0.00 4.30
1738 1789 2.667969 CGTCATGTTCATCTTTCGCTGA 59.332 45.455 0.00 0.00 0.00 4.26
1739 1790 3.482598 CGTCATGTTCATCTTTCGCTGAC 60.483 47.826 0.00 0.00 0.00 3.51
1802 1886 4.705023 ACATTGCACCAAATTAGGTAGGTC 59.295 41.667 0.00 0.00 40.77 3.85
1851 1941 2.353269 TCGATGTTGTCCAAACACACAC 59.647 45.455 0.00 0.00 34.35 3.82
1852 1942 2.096657 CGATGTTGTCCAAACACACACA 59.903 45.455 0.00 0.00 34.35 3.72
1853 1943 3.243035 CGATGTTGTCCAAACACACACAT 60.243 43.478 0.00 0.00 34.35 3.21
1854 1944 3.773860 TGTTGTCCAAACACACACATC 57.226 42.857 0.00 0.00 34.35 3.06
1855 1945 2.425312 TGTTGTCCAAACACACACATCC 59.575 45.455 0.00 0.00 34.35 3.51
1856 1946 2.425312 GTTGTCCAAACACACACATCCA 59.575 45.455 0.00 0.00 34.35 3.41
1857 1947 2.296792 TGTCCAAACACACACATCCAG 58.703 47.619 0.00 0.00 0.00 3.86
1858 1948 2.092699 TGTCCAAACACACACATCCAGA 60.093 45.455 0.00 0.00 0.00 3.86
1859 1949 2.549754 GTCCAAACACACACATCCAGAG 59.450 50.000 0.00 0.00 0.00 3.35
1860 1950 2.172505 TCCAAACACACACATCCAGAGT 59.827 45.455 0.00 0.00 0.00 3.24
1861 1951 3.389656 TCCAAACACACACATCCAGAGTA 59.610 43.478 0.00 0.00 0.00 2.59
1862 1952 3.498397 CCAAACACACACATCCAGAGTAC 59.502 47.826 0.00 0.00 0.00 2.73
1863 1953 4.126437 CAAACACACACATCCAGAGTACA 58.874 43.478 0.00 0.00 0.00 2.90
1864 1954 4.415881 AACACACACATCCAGAGTACAA 57.584 40.909 0.00 0.00 0.00 2.41
1875 1965 2.679837 CCAGAGTACAACCACATCATGC 59.320 50.000 0.00 0.00 0.00 4.06
1907 1997 4.521146 CCTCCATTTCTCAACTGCTACAT 58.479 43.478 0.00 0.00 0.00 2.29
1918 2008 1.210478 ACTGCTACATGCCAAGTAGGG 59.790 52.381 8.98 0.00 42.00 3.53
1971 2071 8.828688 TCTGATGTACATGATCATCTCAATTC 57.171 34.615 14.43 0.17 40.46 2.17
2045 2145 2.570302 GAGGAAAGCCCAGTAACACCTA 59.430 50.000 0.00 0.00 37.41 3.08
2046 2146 2.305052 AGGAAAGCCCAGTAACACCTAC 59.695 50.000 0.00 0.00 37.41 3.18
2053 2153 1.820519 CCAGTAACACCTACTACGCCA 59.179 52.381 0.00 0.00 38.92 5.69
2077 2177 2.824041 CCACCAATTCCCGAGGCG 60.824 66.667 0.00 0.00 0.00 5.52
2092 2192 3.386237 GCGTGGAGGAGCCTGACT 61.386 66.667 0.00 0.00 37.63 3.41
2137 2237 1.669760 TTGGTCGCTACCTTTGCCG 60.670 57.895 9.09 0.00 46.91 5.69
2219 2319 2.483877 TGAAGGCTTATTCAACAGCACG 59.516 45.455 0.00 0.00 36.28 5.34
2227 2327 3.594775 CAACAGCACGGCCAGCAA 61.595 61.111 18.34 0.00 0.00 3.91
2242 2343 4.959446 CAAAAGCTGCTGCACTCC 57.041 55.556 18.42 0.00 42.74 3.85
2320 2422 3.648339 AGAGCTTTAACCGACGTGTTA 57.352 42.857 0.00 0.00 0.00 2.41
2337 2439 5.927689 ACGTGTTATTTGTTTCTATCCGTGA 59.072 36.000 0.00 0.00 0.00 4.35
2339 2441 6.540205 GTGTTATTTGTTTCTATCCGTGACC 58.460 40.000 0.00 0.00 0.00 4.02
2345 2447 5.018539 TGTTTCTATCCGTGACCTAATGG 57.981 43.478 0.00 0.00 39.83 3.16
2375 2477 2.032054 TGCTCTCTTTTGCTTCGTTGTG 59.968 45.455 0.00 0.00 0.00 3.33
2400 2603 3.833442 TCGTGATGTTGTGCAGTAGTAG 58.167 45.455 0.00 0.00 0.00 2.57
2409 2612 7.182817 TGTTGTGCAGTAGTAGATAGGAATT 57.817 36.000 0.00 0.00 0.00 2.17
2429 2632 2.821437 TCAGGGGAGAAGTGTAGGAAG 58.179 52.381 0.00 0.00 0.00 3.46
2476 2679 2.050350 CAATGGGCTGGCTGGAGTG 61.050 63.158 0.00 0.00 0.00 3.51
2514 2717 2.257034 GCTGCTCTGTTTTATTGCTGC 58.743 47.619 0.00 0.00 40.22 5.25
2523 2726 4.722194 TGTTTTATTGCTGCGATGAGTTC 58.278 39.130 12.66 0.89 0.00 3.01
2524 2727 4.098416 GTTTTATTGCTGCGATGAGTTCC 58.902 43.478 12.66 0.00 0.00 3.62
2570 3017 5.852282 AAATGCACCTGTCAAACTTAAGT 57.148 34.783 1.12 1.12 0.00 2.24
2571 3018 4.836125 ATGCACCTGTCAAACTTAAGTG 57.164 40.909 9.34 0.00 0.00 3.16
2572 3019 3.879998 TGCACCTGTCAAACTTAAGTGA 58.120 40.909 9.34 0.00 0.00 3.41
2573 3020 3.876914 TGCACCTGTCAAACTTAAGTGAG 59.123 43.478 9.34 5.06 0.00 3.51
2574 3021 3.877508 GCACCTGTCAAACTTAAGTGAGT 59.122 43.478 9.34 0.00 0.00 3.41
2575 3022 4.335594 GCACCTGTCAAACTTAAGTGAGTT 59.664 41.667 9.34 0.00 41.44 3.01
2576 3023 5.730568 GCACCTGTCAAACTTAAGTGAGTTG 60.731 44.000 9.34 10.29 39.68 3.16
2577 3024 4.881850 ACCTGTCAAACTTAAGTGAGTTGG 59.118 41.667 9.34 10.00 39.68 3.77
2578 3025 4.881850 CCTGTCAAACTTAAGTGAGTTGGT 59.118 41.667 9.34 0.00 39.68 3.67
2579 3026 5.007724 CCTGTCAAACTTAAGTGAGTTGGTC 59.992 44.000 9.34 7.91 39.68 4.02
2580 3027 5.492895 TGTCAAACTTAAGTGAGTTGGTCA 58.507 37.500 9.34 10.03 39.68 4.02
2581 3028 5.941058 TGTCAAACTTAAGTGAGTTGGTCAA 59.059 36.000 9.34 0.00 39.68 3.18
2582 3029 6.431543 TGTCAAACTTAAGTGAGTTGGTCAAA 59.568 34.615 9.34 0.00 39.68 2.69
2583 3030 7.040340 TGTCAAACTTAAGTGAGTTGGTCAAAA 60.040 33.333 9.34 0.00 39.68 2.44
2584 3031 7.272731 GTCAAACTTAAGTGAGTTGGTCAAAAC 59.727 37.037 9.34 0.33 39.68 2.43
2585 3032 5.830000 ACTTAAGTGAGTTGGTCAAAACC 57.170 39.130 7.48 0.00 46.66 3.27
2595 3042 2.303163 GGTCAAAACCAACAACCCAC 57.697 50.000 0.00 0.00 45.68 4.61
2596 3043 1.550976 GGTCAAAACCAACAACCCACA 59.449 47.619 0.00 0.00 45.68 4.17
2597 3044 2.418060 GGTCAAAACCAACAACCCACAG 60.418 50.000 0.00 0.00 45.68 3.66
2598 3045 2.232696 GTCAAAACCAACAACCCACAGT 59.767 45.455 0.00 0.00 0.00 3.55
2599 3046 2.900546 TCAAAACCAACAACCCACAGTT 59.099 40.909 0.00 0.00 40.16 3.16
2600 3047 3.325135 TCAAAACCAACAACCCACAGTTT 59.675 39.130 0.00 0.00 36.18 2.66
2601 3048 4.527038 TCAAAACCAACAACCCACAGTTTA 59.473 37.500 0.00 0.00 36.18 2.01
2602 3049 5.011738 TCAAAACCAACAACCCACAGTTTAA 59.988 36.000 0.00 0.00 36.18 1.52
2603 3050 5.685520 AAACCAACAACCCACAGTTTAAT 57.314 34.783 0.00 0.00 36.18 1.40
2604 3051 4.664150 ACCAACAACCCACAGTTTAATG 57.336 40.909 0.00 0.00 36.18 1.90
2605 3052 3.181470 ACCAACAACCCACAGTTTAATGC 60.181 43.478 0.00 0.00 36.18 3.56
2606 3053 3.181471 CCAACAACCCACAGTTTAATGCA 60.181 43.478 0.00 0.00 36.18 3.96
2607 3054 4.050553 CAACAACCCACAGTTTAATGCAG 58.949 43.478 0.00 0.00 36.18 4.41
2608 3055 3.561143 ACAACCCACAGTTTAATGCAGA 58.439 40.909 0.00 0.00 36.18 4.26
2609 3056 4.151883 ACAACCCACAGTTTAATGCAGAT 58.848 39.130 0.00 0.00 36.18 2.90
2610 3057 4.588528 ACAACCCACAGTTTAATGCAGATT 59.411 37.500 0.00 0.00 36.18 2.40
2611 3058 4.789012 ACCCACAGTTTAATGCAGATTG 57.211 40.909 0.00 0.00 0.00 2.67
2612 3059 4.406456 ACCCACAGTTTAATGCAGATTGA 58.594 39.130 0.00 0.00 0.00 2.57
2613 3060 4.218417 ACCCACAGTTTAATGCAGATTGAC 59.782 41.667 0.00 0.00 0.00 3.18
2614 3061 4.218200 CCCACAGTTTAATGCAGATTGACA 59.782 41.667 0.00 0.00 0.00 3.58
2615 3062 5.396484 CCACAGTTTAATGCAGATTGACAG 58.604 41.667 0.00 0.00 0.00 3.51
2616 3063 4.855388 CACAGTTTAATGCAGATTGACAGC 59.145 41.667 0.00 0.00 0.00 4.40
2617 3064 4.763793 ACAGTTTAATGCAGATTGACAGCT 59.236 37.500 0.00 0.00 32.18 4.24
2618 3065 5.093457 CAGTTTAATGCAGATTGACAGCTG 58.907 41.667 13.48 13.48 35.28 4.24
2619 3066 5.005740 AGTTTAATGCAGATTGACAGCTGA 58.994 37.500 23.35 0.00 34.06 4.26
2620 3067 4.952262 TTAATGCAGATTGACAGCTGAC 57.048 40.909 23.35 15.92 34.06 3.51
2621 3068 1.747709 ATGCAGATTGACAGCTGACC 58.252 50.000 23.35 12.23 34.06 4.02
2622 3069 0.689055 TGCAGATTGACAGCTGACCT 59.311 50.000 23.35 4.03 34.06 3.85
2623 3070 1.901833 TGCAGATTGACAGCTGACCTA 59.098 47.619 23.35 9.01 34.06 3.08
2624 3071 2.302733 TGCAGATTGACAGCTGACCTAA 59.697 45.455 23.35 6.04 34.06 2.69
2625 3072 2.675348 GCAGATTGACAGCTGACCTAAC 59.325 50.000 23.35 7.50 34.06 2.34
2626 3073 3.618507 GCAGATTGACAGCTGACCTAACT 60.619 47.826 23.35 9.60 34.06 2.24
2627 3074 4.180057 CAGATTGACAGCTGACCTAACTC 58.820 47.826 23.35 5.96 34.06 3.01
2628 3075 4.081752 CAGATTGACAGCTGACCTAACTCT 60.082 45.833 23.35 9.54 34.06 3.24
2629 3076 3.667497 TTGACAGCTGACCTAACTCTG 57.333 47.619 23.35 0.00 0.00 3.35
2630 3077 2.598565 TGACAGCTGACCTAACTCTGT 58.401 47.619 23.35 0.00 40.31 3.41
2631 3078 2.965831 TGACAGCTGACCTAACTCTGTT 59.034 45.455 23.35 0.00 38.03 3.16
2632 3079 3.243873 TGACAGCTGACCTAACTCTGTTG 60.244 47.826 23.35 0.00 38.03 3.33
2633 3080 2.037772 ACAGCTGACCTAACTCTGTTGG 59.962 50.000 23.35 0.00 34.69 3.77
2634 3081 2.300152 CAGCTGACCTAACTCTGTTGGA 59.700 50.000 8.42 0.00 0.00 3.53
2635 3082 2.972713 AGCTGACCTAACTCTGTTGGAA 59.027 45.455 0.00 0.00 0.00 3.53
2636 3083 3.584848 AGCTGACCTAACTCTGTTGGAAT 59.415 43.478 0.00 0.00 0.00 3.01
2637 3084 4.042187 AGCTGACCTAACTCTGTTGGAATT 59.958 41.667 0.00 0.00 0.00 2.17
2638 3085 5.248477 AGCTGACCTAACTCTGTTGGAATTA 59.752 40.000 0.00 0.00 0.00 1.40
2639 3086 6.069963 AGCTGACCTAACTCTGTTGGAATTAT 60.070 38.462 0.00 0.00 0.00 1.28
2640 3087 7.125811 AGCTGACCTAACTCTGTTGGAATTATA 59.874 37.037 0.00 0.00 0.00 0.98
2641 3088 7.934120 GCTGACCTAACTCTGTTGGAATTATAT 59.066 37.037 0.00 0.00 0.00 0.86
2642 3089 9.482627 CTGACCTAACTCTGTTGGAATTATATC 57.517 37.037 0.00 0.00 0.00 1.63
2643 3090 9.213777 TGACCTAACTCTGTTGGAATTATATCT 57.786 33.333 0.00 0.00 0.00 1.98
2644 3091 9.482627 GACCTAACTCTGTTGGAATTATATCTG 57.517 37.037 0.00 0.00 0.00 2.90
2645 3092 9.213777 ACCTAACTCTGTTGGAATTATATCTGA 57.786 33.333 0.00 0.00 0.00 3.27
2649 3096 8.723942 ACTCTGTTGGAATTATATCTGAACAC 57.276 34.615 0.00 0.00 0.00 3.32
2650 3097 8.543774 ACTCTGTTGGAATTATATCTGAACACT 58.456 33.333 0.00 0.00 0.00 3.55
2678 3125 1.980844 CAATGCGCTGTTAAACTGCAG 59.019 47.619 13.48 13.48 42.26 4.41
2687 3134 3.550820 TGTTAAACTGCAGCAAGGAGAA 58.449 40.909 15.27 0.00 38.04 2.87
2692 3139 1.627329 ACTGCAGCAAGGAGAATGAGA 59.373 47.619 15.27 0.00 38.04 3.27
2695 3142 1.678123 GCAGCAAGGAGAATGAGAGCA 60.678 52.381 0.00 0.00 0.00 4.26
2699 3146 2.419324 GCAAGGAGAATGAGAGCACAAG 59.581 50.000 0.00 0.00 0.00 3.16
2700 3147 3.867600 GCAAGGAGAATGAGAGCACAAGA 60.868 47.826 0.00 0.00 0.00 3.02
2750 3197 5.932303 TGGCAAACTACTGACTTCTATTCAC 59.068 40.000 0.00 0.00 0.00 3.18
2802 3249 6.091713 CCAGATAAAAGCCTGCATTTTCAAAG 59.908 38.462 0.00 0.00 32.38 2.77
2808 3255 5.126396 AGCCTGCATTTTCAAAGTACTTC 57.874 39.130 8.95 0.00 0.00 3.01
2814 3261 7.591426 CCTGCATTTTCAAAGTACTTCTACAAC 59.409 37.037 8.95 0.00 0.00 3.32
2834 3281 6.815089 ACAACTTTGAACCTGCATTTCATTA 58.185 32.000 10.76 3.65 33.03 1.90
2851 3298 5.798125 TCATTACATTGCCTTGTTTCCAA 57.202 34.783 0.00 0.00 0.00 3.53
2854 3301 7.319646 TCATTACATTGCCTTGTTTCCAATAC 58.680 34.615 0.00 0.00 0.00 1.89
2884 3331 9.878599 ATGTTGTTCTTTTCTTTGATAGTAACG 57.121 29.630 0.00 0.00 0.00 3.18
2894 3341 9.831737 TTTCTTTGATAGTAACGTACTACTGAC 57.168 33.333 9.67 5.00 43.46 3.51
2895 3342 8.783833 TCTTTGATAGTAACGTACTACTGACT 57.216 34.615 9.67 0.00 43.46 3.41
2896 3343 9.875691 TCTTTGATAGTAACGTACTACTGACTA 57.124 33.333 9.67 1.01 43.46 2.59
2900 3347 9.473640 TGATAGTAACGTACTACTGACTATCTG 57.526 37.037 19.87 0.00 43.46 2.90
2901 3348 9.689976 GATAGTAACGTACTACTGACTATCTGA 57.310 37.037 9.67 0.00 43.46 3.27
2903 3350 8.422973 AGTAACGTACTACTGACTATCTGAAG 57.577 38.462 0.00 0.00 37.23 3.02
2904 3351 8.040132 AGTAACGTACTACTGACTATCTGAAGT 58.960 37.037 0.00 0.00 37.23 3.01
2905 3352 6.907206 ACGTACTACTGACTATCTGAAGTC 57.093 41.667 10.90 10.90 45.10 3.01
2914 3361 4.429108 GACTATCTGAAGTCAGGTTGAGC 58.571 47.826 9.55 0.00 44.41 4.26
2915 3362 3.834813 ACTATCTGAAGTCAGGTTGAGCA 59.165 43.478 9.55 0.00 43.91 4.26
2916 3363 3.996921 ATCTGAAGTCAGGTTGAGCAT 57.003 42.857 8.42 0.00 43.91 3.79
2917 3364 3.049708 TCTGAAGTCAGGTTGAGCATG 57.950 47.619 8.42 0.00 43.91 4.06
2918 3365 2.634453 TCTGAAGTCAGGTTGAGCATGA 59.366 45.455 8.42 0.00 43.91 3.07
2936 3383 1.919918 GACTCGAGTCAGATTGGCTG 58.080 55.000 34.97 0.00 46.31 4.85
2937 3384 0.108424 ACTCGAGTCAGATTGGCTGC 60.108 55.000 13.58 0.00 44.52 5.25
2938 3385 0.175302 CTCGAGTCAGATTGGCTGCT 59.825 55.000 3.62 0.00 44.52 4.24
2939 3386 0.108472 TCGAGTCAGATTGGCTGCTG 60.108 55.000 0.00 0.00 44.52 4.41
2940 3387 0.390866 CGAGTCAGATTGGCTGCTGT 60.391 55.000 0.00 0.00 44.52 4.40
2941 3388 1.818642 GAGTCAGATTGGCTGCTGTT 58.181 50.000 0.00 0.00 44.52 3.16
2942 3389 1.467734 GAGTCAGATTGGCTGCTGTTG 59.532 52.381 0.00 0.00 44.52 3.33
2943 3390 1.072806 AGTCAGATTGGCTGCTGTTGA 59.927 47.619 0.00 0.00 44.52 3.18
2944 3391 1.881973 GTCAGATTGGCTGCTGTTGAA 59.118 47.619 0.00 0.00 44.52 2.69
2945 3392 2.490903 GTCAGATTGGCTGCTGTTGAAT 59.509 45.455 0.00 0.00 44.52 2.57
2946 3393 2.751259 TCAGATTGGCTGCTGTTGAATC 59.249 45.455 0.00 0.93 44.52 2.52
2947 3394 2.097825 AGATTGGCTGCTGTTGAATCC 58.902 47.619 0.00 0.00 0.00 3.01
2948 3395 0.813184 ATTGGCTGCTGTTGAATCCG 59.187 50.000 0.00 0.00 0.00 4.18
2949 3396 0.537143 TTGGCTGCTGTTGAATCCGT 60.537 50.000 0.00 0.00 0.00 4.69
2950 3397 0.537143 TGGCTGCTGTTGAATCCGTT 60.537 50.000 0.00 0.00 0.00 4.44
2951 3398 0.109597 GGCTGCTGTTGAATCCGTTG 60.110 55.000 0.00 0.00 0.00 4.10
2952 3399 0.874390 GCTGCTGTTGAATCCGTTGA 59.126 50.000 0.00 0.00 0.00 3.18
2953 3400 1.135859 GCTGCTGTTGAATCCGTTGAG 60.136 52.381 0.00 0.00 0.00 3.02
2954 3401 0.874390 TGCTGTTGAATCCGTTGAGC 59.126 50.000 0.00 0.00 0.00 4.26
2955 3402 0.874390 GCTGTTGAATCCGTTGAGCA 59.126 50.000 0.00 0.00 0.00 4.26
2956 3403 1.470098 GCTGTTGAATCCGTTGAGCAT 59.530 47.619 0.00 0.00 0.00 3.79
2957 3404 2.095059 GCTGTTGAATCCGTTGAGCATT 60.095 45.455 0.00 0.00 0.00 3.56
2958 3405 3.751621 CTGTTGAATCCGTTGAGCATTC 58.248 45.455 0.00 0.00 0.00 2.67
2959 3406 2.159430 TGTTGAATCCGTTGAGCATTCG 59.841 45.455 0.00 0.00 30.35 3.34
2960 3407 2.093306 TGAATCCGTTGAGCATTCGT 57.907 45.000 0.00 0.00 30.35 3.85
2961 3408 2.422597 TGAATCCGTTGAGCATTCGTT 58.577 42.857 0.00 0.00 30.35 3.85
2962 3409 2.415168 TGAATCCGTTGAGCATTCGTTC 59.585 45.455 0.00 0.00 30.35 3.95
2963 3410 1.369625 ATCCGTTGAGCATTCGTTCC 58.630 50.000 0.00 0.00 0.00 3.62
2964 3411 1.011968 TCCGTTGAGCATTCGTTCCG 61.012 55.000 0.00 0.00 0.00 4.30
2965 3412 1.419922 CGTTGAGCATTCGTTCCGG 59.580 57.895 0.00 0.00 0.00 5.14
2966 3413 1.289109 CGTTGAGCATTCGTTCCGGT 61.289 55.000 0.00 0.00 0.00 5.28
2967 3414 0.442699 GTTGAGCATTCGTTCCGGTC 59.557 55.000 0.00 0.00 0.00 4.79
2968 3415 0.672401 TTGAGCATTCGTTCCGGTCC 60.672 55.000 0.00 0.00 0.00 4.46
2969 3416 1.218316 GAGCATTCGTTCCGGTCCT 59.782 57.895 0.00 0.00 0.00 3.85
2970 3417 1.079127 AGCATTCGTTCCGGTCCTG 60.079 57.895 0.00 0.00 0.00 3.86
2971 3418 1.375523 GCATTCGTTCCGGTCCTGT 60.376 57.895 0.00 0.00 0.00 4.00
2972 3419 1.359459 GCATTCGTTCCGGTCCTGTC 61.359 60.000 0.00 0.00 0.00 3.51
2973 3420 0.246635 CATTCGTTCCGGTCCTGTCT 59.753 55.000 0.00 0.00 0.00 3.41
2974 3421 1.475280 CATTCGTTCCGGTCCTGTCTA 59.525 52.381 0.00 0.00 0.00 2.59
2975 3422 1.843368 TTCGTTCCGGTCCTGTCTAT 58.157 50.000 0.00 0.00 0.00 1.98
2976 3423 1.100510 TCGTTCCGGTCCTGTCTATG 58.899 55.000 0.00 0.00 0.00 2.23
2977 3424 0.527817 CGTTCCGGTCCTGTCTATGC 60.528 60.000 0.00 0.00 0.00 3.14
2978 3425 0.535335 GTTCCGGTCCTGTCTATGCA 59.465 55.000 0.00 0.00 0.00 3.96
2979 3426 0.824109 TTCCGGTCCTGTCTATGCAG 59.176 55.000 0.00 0.00 36.31 4.41
2980 3427 0.324368 TCCGGTCCTGTCTATGCAGT 60.324 55.000 0.00 0.00 34.84 4.40
2981 3428 0.179100 CCGGTCCTGTCTATGCAGTG 60.179 60.000 0.00 0.00 34.84 3.66
2982 3429 0.532573 CGGTCCTGTCTATGCAGTGT 59.467 55.000 0.00 0.00 34.84 3.55
2983 3430 1.066858 CGGTCCTGTCTATGCAGTGTT 60.067 52.381 0.00 0.00 34.84 3.32
2984 3431 2.622436 GGTCCTGTCTATGCAGTGTTC 58.378 52.381 0.00 0.00 34.84 3.18
2985 3432 2.234908 GGTCCTGTCTATGCAGTGTTCT 59.765 50.000 0.00 0.00 34.84 3.01
2986 3433 3.307059 GGTCCTGTCTATGCAGTGTTCTT 60.307 47.826 0.00 0.00 34.84 2.52
2987 3434 3.929610 GTCCTGTCTATGCAGTGTTCTTC 59.070 47.826 0.00 0.00 34.84 2.87
2988 3435 3.055819 TCCTGTCTATGCAGTGTTCTTCC 60.056 47.826 0.00 0.00 34.84 3.46
2989 3436 3.055530 CCTGTCTATGCAGTGTTCTTCCT 60.056 47.826 0.00 0.00 34.84 3.36
2990 3437 4.564406 CCTGTCTATGCAGTGTTCTTCCTT 60.564 45.833 0.00 0.00 34.84 3.36
2991 3438 4.569943 TGTCTATGCAGTGTTCTTCCTTC 58.430 43.478 0.00 0.00 0.00 3.46
2992 3439 4.040339 TGTCTATGCAGTGTTCTTCCTTCA 59.960 41.667 0.00 0.00 0.00 3.02
2993 3440 5.181748 GTCTATGCAGTGTTCTTCCTTCAT 58.818 41.667 0.00 0.00 0.00 2.57
2994 3441 5.064452 GTCTATGCAGTGTTCTTCCTTCATG 59.936 44.000 0.00 0.00 0.00 3.07
2995 3442 1.881973 TGCAGTGTTCTTCCTTCATGC 59.118 47.619 0.00 0.00 0.00 4.06
2996 3443 1.200948 GCAGTGTTCTTCCTTCATGCC 59.799 52.381 0.00 0.00 0.00 4.40
2997 3444 1.815003 CAGTGTTCTTCCTTCATGCCC 59.185 52.381 0.00 0.00 0.00 5.36
2998 3445 0.804989 GTGTTCTTCCTTCATGCCCG 59.195 55.000 0.00 0.00 0.00 6.13
2999 3446 0.400213 TGTTCTTCCTTCATGCCCGT 59.600 50.000 0.00 0.00 0.00 5.28
3000 3447 1.087501 GTTCTTCCTTCATGCCCGTC 58.912 55.000 0.00 0.00 0.00 4.79
3001 3448 0.984230 TTCTTCCTTCATGCCCGTCT 59.016 50.000 0.00 0.00 0.00 4.18
3002 3449 0.984230 TCTTCCTTCATGCCCGTCTT 59.016 50.000 0.00 0.00 0.00 3.01
3003 3450 1.066143 TCTTCCTTCATGCCCGTCTTC 60.066 52.381 0.00 0.00 0.00 2.87
3004 3451 0.035439 TTCCTTCATGCCCGTCTTCC 60.035 55.000 0.00 0.00 0.00 3.46
3005 3452 1.815421 CCTTCATGCCCGTCTTCCG 60.815 63.158 0.00 0.00 0.00 4.30
3006 3453 2.435938 TTCATGCCCGTCTTCCGC 60.436 61.111 0.00 0.00 34.38 5.54
3007 3454 2.859273 CTTCATGCCCGTCTTCCGCT 62.859 60.000 0.00 0.00 34.38 5.52
3008 3455 3.197790 CATGCCCGTCTTCCGCTG 61.198 66.667 0.00 0.00 34.38 5.18
3009 3456 4.473520 ATGCCCGTCTTCCGCTGG 62.474 66.667 0.00 0.00 34.38 4.85
3012 3459 3.691342 CCCGTCTTCCGCTGGTGA 61.691 66.667 0.00 0.00 34.38 4.02
3013 3460 2.342279 CCGTCTTCCGCTGGTGAA 59.658 61.111 0.00 0.00 34.38 3.18
3014 3461 1.301401 CCGTCTTCCGCTGGTGAAA 60.301 57.895 0.00 0.00 34.38 2.69
3015 3462 1.566018 CCGTCTTCCGCTGGTGAAAC 61.566 60.000 0.00 0.00 34.38 2.78
3016 3463 0.878523 CGTCTTCCGCTGGTGAAACA 60.879 55.000 0.00 0.00 39.98 2.83
3017 3464 1.305201 GTCTTCCGCTGGTGAAACAA 58.695 50.000 0.00 0.00 39.98 2.83
3018 3465 1.880027 GTCTTCCGCTGGTGAAACAAT 59.120 47.619 0.00 0.00 39.98 2.71
3019 3466 3.071479 GTCTTCCGCTGGTGAAACAATA 58.929 45.455 0.00 0.00 39.98 1.90
3020 3467 3.125316 GTCTTCCGCTGGTGAAACAATAG 59.875 47.826 0.00 0.00 39.98 1.73
3021 3468 3.007506 TCTTCCGCTGGTGAAACAATAGA 59.992 43.478 0.00 0.00 39.98 1.98
3022 3469 3.627395 TCCGCTGGTGAAACAATAGAT 57.373 42.857 0.00 0.00 39.98 1.98
3023 3470 3.270027 TCCGCTGGTGAAACAATAGATG 58.730 45.455 0.00 0.00 39.98 2.90
3024 3471 2.223340 CCGCTGGTGAAACAATAGATGC 60.223 50.000 0.00 0.00 39.98 3.91
3025 3472 2.419673 CGCTGGTGAAACAATAGATGCA 59.580 45.455 0.00 0.00 39.98 3.96
3026 3473 3.065786 CGCTGGTGAAACAATAGATGCAT 59.934 43.478 0.00 0.00 39.98 3.96
3027 3474 4.273235 CGCTGGTGAAACAATAGATGCATA 59.727 41.667 0.00 0.00 39.98 3.14
3028 3475 5.559608 CGCTGGTGAAACAATAGATGCATAG 60.560 44.000 0.00 0.00 39.98 2.23
3029 3476 5.278169 GCTGGTGAAACAATAGATGCATAGG 60.278 44.000 0.00 0.00 39.98 2.57
3030 3477 6.000246 TGGTGAAACAATAGATGCATAGGA 58.000 37.500 0.00 0.00 39.98 2.94
3031 3478 5.822519 TGGTGAAACAATAGATGCATAGGAC 59.177 40.000 0.00 0.00 39.98 3.85
3032 3479 5.822519 GGTGAAACAATAGATGCATAGGACA 59.177 40.000 0.00 0.00 39.98 4.02
3033 3480 6.238484 GGTGAAACAATAGATGCATAGGACAC 60.238 42.308 0.00 1.42 39.98 3.67
3034 3481 6.540189 GTGAAACAATAGATGCATAGGACACT 59.460 38.462 0.00 0.00 36.32 3.55
3035 3482 6.539826 TGAAACAATAGATGCATAGGACACTG 59.460 38.462 0.00 0.00 0.00 3.66
3036 3483 5.876651 ACAATAGATGCATAGGACACTGA 57.123 39.130 0.00 0.00 0.00 3.41
3037 3484 6.239217 ACAATAGATGCATAGGACACTGAA 57.761 37.500 0.00 0.00 0.00 3.02
3038 3485 6.835174 ACAATAGATGCATAGGACACTGAAT 58.165 36.000 0.00 0.00 0.00 2.57
3039 3486 6.709397 ACAATAGATGCATAGGACACTGAATG 59.291 38.462 0.00 0.00 0.00 2.67
3041 3488 5.876651 AGATGCATAGGACACTGAATGTA 57.123 39.130 0.00 0.00 43.56 2.29
3042 3489 5.605534 AGATGCATAGGACACTGAATGTAC 58.394 41.667 0.00 0.00 43.56 2.90
3049 3496 3.904571 GGACACTGAATGTACGTACACA 58.095 45.455 29.54 21.74 43.56 3.72
3050 3497 4.491676 GGACACTGAATGTACGTACACAT 58.508 43.478 29.54 21.10 43.56 3.21
3052 3499 5.163992 GGACACTGAATGTACGTACACATTG 60.164 44.000 29.54 25.77 46.53 2.82
3053 3500 4.151689 ACACTGAATGTACGTACACATTGC 59.848 41.667 29.54 14.11 46.53 3.56
3054 3501 3.366724 ACTGAATGTACGTACACATTGCG 59.633 43.478 29.54 17.39 46.53 4.85
3055 3502 2.092995 TGAATGTACGTACACATTGCGC 59.907 45.455 29.54 11.47 46.53 6.09
3056 3503 2.004583 ATGTACGTACACATTGCGCT 57.995 45.000 29.54 9.39 39.30 5.92
3057 3504 1.064582 TGTACGTACACATTGCGCTG 58.935 50.000 24.10 0.99 0.00 5.18
3058 3505 1.336056 TGTACGTACACATTGCGCTGA 60.336 47.619 24.10 0.00 0.00 4.26
3059 3506 1.722464 GTACGTACACATTGCGCTGAA 59.278 47.619 20.67 0.00 0.00 3.02
3060 3507 1.438651 ACGTACACATTGCGCTGAAT 58.561 45.000 9.73 0.00 0.00 2.57
3061 3508 1.804151 ACGTACACATTGCGCTGAATT 59.196 42.857 9.73 0.00 0.00 2.17
3062 3509 2.997303 ACGTACACATTGCGCTGAATTA 59.003 40.909 9.73 0.00 0.00 1.40
3063 3510 3.062099 ACGTACACATTGCGCTGAATTAG 59.938 43.478 9.73 0.00 0.00 1.73
3064 3511 3.544048 CGTACACATTGCGCTGAATTAGG 60.544 47.826 9.73 0.00 0.00 2.69
3065 3512 1.133025 ACACATTGCGCTGAATTAGGC 59.867 47.619 9.73 0.00 0.00 3.93
3066 3513 1.132834 CACATTGCGCTGAATTAGGCA 59.867 47.619 9.73 0.00 32.90 4.75
3067 3514 1.402968 ACATTGCGCTGAATTAGGCAG 59.597 47.619 9.73 0.00 35.17 4.85
3068 3515 1.027357 ATTGCGCTGAATTAGGCAGG 58.973 50.000 9.73 0.00 35.17 4.85
3069 3516 0.322456 TTGCGCTGAATTAGGCAGGT 60.322 50.000 9.73 0.00 35.17 4.00
3070 3517 1.026182 TGCGCTGAATTAGGCAGGTG 61.026 55.000 9.73 0.00 34.00 4.00
3071 3518 1.718757 GCGCTGAATTAGGCAGGTGG 61.719 60.000 0.00 0.00 34.00 4.61
3072 3519 1.097547 CGCTGAATTAGGCAGGTGGG 61.098 60.000 0.00 0.00 34.00 4.61
3073 3520 1.387295 GCTGAATTAGGCAGGTGGGC 61.387 60.000 0.00 0.00 43.80 5.36
3080 3527 4.437587 GGCAGGTGGGCTGCTGAT 62.438 66.667 0.00 0.00 46.16 2.90
3081 3528 3.138798 GCAGGTGGGCTGCTGATG 61.139 66.667 0.00 0.00 43.81 3.07
3082 3529 2.439701 CAGGTGGGCTGCTGATGG 60.440 66.667 0.00 0.00 0.00 3.51
3083 3530 4.437587 AGGTGGGCTGCTGATGGC 62.438 66.667 0.00 0.00 42.22 4.40
3084 3531 4.437587 GGTGGGCTGCTGATGGCT 62.438 66.667 0.00 0.00 42.39 4.75
3085 3532 2.591753 GTGGGCTGCTGATGGCTA 59.408 61.111 0.00 0.00 42.39 3.93
3086 3533 1.821332 GTGGGCTGCTGATGGCTAC 60.821 63.158 0.00 0.00 42.39 3.58
3087 3534 1.997311 TGGGCTGCTGATGGCTACT 60.997 57.895 0.00 0.00 42.39 2.57
3088 3535 1.227793 GGGCTGCTGATGGCTACTC 60.228 63.158 0.00 0.00 42.39 2.59
3089 3536 1.524002 GGCTGCTGATGGCTACTCA 59.476 57.895 0.00 0.00 42.39 3.41
3090 3537 0.108207 GGCTGCTGATGGCTACTCAT 59.892 55.000 0.00 0.00 42.39 2.90
3091 3538 1.476471 GGCTGCTGATGGCTACTCATT 60.476 52.381 0.00 0.00 42.39 2.57
3092 3539 2.295885 GCTGCTGATGGCTACTCATTT 58.704 47.619 0.00 0.00 42.39 2.32
3093 3540 2.290093 GCTGCTGATGGCTACTCATTTC 59.710 50.000 0.00 0.00 42.39 2.17
3094 3541 3.806380 CTGCTGATGGCTACTCATTTCT 58.194 45.455 0.00 0.00 42.39 2.52
3095 3542 4.197750 CTGCTGATGGCTACTCATTTCTT 58.802 43.478 0.00 0.00 42.39 2.52
3096 3543 3.943381 TGCTGATGGCTACTCATTTCTTG 59.057 43.478 0.00 0.00 42.39 3.02
3097 3544 3.944015 GCTGATGGCTACTCATTTCTTGT 59.056 43.478 0.00 0.00 38.06 3.16
3098 3545 5.118990 GCTGATGGCTACTCATTTCTTGTA 58.881 41.667 0.00 0.00 38.06 2.41
3099 3546 5.586243 GCTGATGGCTACTCATTTCTTGTAA 59.414 40.000 0.00 0.00 38.06 2.41
3100 3547 6.261826 GCTGATGGCTACTCATTTCTTGTAAT 59.738 38.462 0.00 0.00 38.06 1.89
3101 3548 7.519649 GCTGATGGCTACTCATTTCTTGTAATC 60.520 40.741 0.00 0.00 38.06 1.75
3102 3549 6.767902 TGATGGCTACTCATTTCTTGTAATCC 59.232 38.462 0.00 0.00 0.00 3.01
3103 3550 6.061022 TGGCTACTCATTTCTTGTAATCCA 57.939 37.500 0.00 0.00 0.00 3.41
3104 3551 6.662755 TGGCTACTCATTTCTTGTAATCCAT 58.337 36.000 0.00 0.00 0.00 3.41
3105 3552 6.543465 TGGCTACTCATTTCTTGTAATCCATG 59.457 38.462 0.00 0.00 0.00 3.66
3106 3553 6.433766 GCTACTCATTTCTTGTAATCCATGC 58.566 40.000 0.00 0.00 0.00 4.06
3107 3554 6.261826 GCTACTCATTTCTTGTAATCCATGCT 59.738 38.462 0.00 0.00 0.00 3.79
3108 3555 6.446781 ACTCATTTCTTGTAATCCATGCTG 57.553 37.500 0.00 0.00 0.00 4.41
3109 3556 5.948162 ACTCATTTCTTGTAATCCATGCTGT 59.052 36.000 0.00 0.00 0.00 4.40
3110 3557 6.435277 ACTCATTTCTTGTAATCCATGCTGTT 59.565 34.615 0.00 0.00 0.00 3.16
3111 3558 7.039504 ACTCATTTCTTGTAATCCATGCTGTTT 60.040 33.333 0.00 0.00 0.00 2.83
3112 3559 7.092079 TCATTTCTTGTAATCCATGCTGTTTG 58.908 34.615 0.00 0.00 0.00 2.93
3113 3560 6.403866 TTTCTTGTAATCCATGCTGTTTGT 57.596 33.333 0.00 0.00 0.00 2.83
3114 3561 5.375417 TCTTGTAATCCATGCTGTTTGTG 57.625 39.130 0.00 0.00 0.00 3.33
3115 3562 3.574284 TGTAATCCATGCTGTTTGTGC 57.426 42.857 0.00 0.00 0.00 4.57
3116 3563 3.156293 TGTAATCCATGCTGTTTGTGCT 58.844 40.909 0.00 0.00 0.00 4.40
3117 3564 4.331108 TGTAATCCATGCTGTTTGTGCTA 58.669 39.130 0.00 0.00 0.00 3.49
3118 3565 4.764308 TGTAATCCATGCTGTTTGTGCTAA 59.236 37.500 0.00 0.00 0.00 3.09
3119 3566 4.870123 AATCCATGCTGTTTGTGCTAAA 57.130 36.364 0.00 0.00 0.00 1.85
3120 3567 4.870123 ATCCATGCTGTTTGTGCTAAAA 57.130 36.364 0.00 0.00 0.00 1.52
3121 3568 3.976169 TCCATGCTGTTTGTGCTAAAAC 58.024 40.909 7.60 7.60 39.90 2.43
3122 3569 2.725723 CCATGCTGTTTGTGCTAAAACG 59.274 45.455 9.33 6.41 41.92 3.60
3123 3570 1.833860 TGCTGTTTGTGCTAAAACGC 58.166 45.000 16.45 16.45 41.92 4.84
3124 3571 1.128513 GCTGTTTGTGCTAAAACGCC 58.871 50.000 14.33 5.34 41.92 5.68
3125 3572 1.766069 CTGTTTGTGCTAAAACGCCC 58.234 50.000 9.33 0.00 41.92 6.13
3126 3573 1.066303 CTGTTTGTGCTAAAACGCCCA 59.934 47.619 9.33 0.00 41.92 5.36
3127 3574 1.202313 TGTTTGTGCTAAAACGCCCAC 60.202 47.619 9.33 0.00 41.92 4.61
3128 3575 1.103803 TTTGTGCTAAAACGCCCACA 58.896 45.000 0.00 0.00 36.51 4.17
3129 3576 0.382515 TTGTGCTAAAACGCCCACAC 59.617 50.000 0.00 0.00 37.87 3.82
3130 3577 1.284715 GTGCTAAAACGCCCACACC 59.715 57.895 0.00 0.00 0.00 4.16
3131 3578 1.899534 TGCTAAAACGCCCACACCC 60.900 57.895 0.00 0.00 0.00 4.61
3132 3579 1.899534 GCTAAAACGCCCACACCCA 60.900 57.895 0.00 0.00 0.00 4.51
3133 3580 1.862602 GCTAAAACGCCCACACCCAG 61.863 60.000 0.00 0.00 0.00 4.45
3134 3581 0.250553 CTAAAACGCCCACACCCAGA 60.251 55.000 0.00 0.00 0.00 3.86
3135 3582 0.535553 TAAAACGCCCACACCCAGAC 60.536 55.000 0.00 0.00 0.00 3.51
3136 3583 2.559922 AAAACGCCCACACCCAGACA 62.560 55.000 0.00 0.00 0.00 3.41
3137 3584 2.958578 AAACGCCCACACCCAGACAG 62.959 60.000 0.00 0.00 0.00 3.51
3138 3585 3.625897 CGCCCACACCCAGACAGA 61.626 66.667 0.00 0.00 0.00 3.41
3139 3586 2.348998 GCCCACACCCAGACAGAG 59.651 66.667 0.00 0.00 0.00 3.35
3140 3587 2.520536 GCCCACACCCAGACAGAGT 61.521 63.158 0.00 0.00 0.00 3.24
3141 3588 1.192146 GCCCACACCCAGACAGAGTA 61.192 60.000 0.00 0.00 0.00 2.59
3142 3589 1.348064 CCCACACCCAGACAGAGTAA 58.652 55.000 0.00 0.00 0.00 2.24
3143 3590 1.002087 CCCACACCCAGACAGAGTAAC 59.998 57.143 0.00 0.00 0.00 2.50
3144 3591 1.691976 CCACACCCAGACAGAGTAACA 59.308 52.381 0.00 0.00 0.00 2.41
3145 3592 2.548067 CCACACCCAGACAGAGTAACAC 60.548 54.545 0.00 0.00 0.00 3.32
3146 3593 1.692519 ACACCCAGACAGAGTAACACC 59.307 52.381 0.00 0.00 0.00 4.16
3147 3594 1.691976 CACCCAGACAGAGTAACACCA 59.308 52.381 0.00 0.00 0.00 4.17
3148 3595 1.692519 ACCCAGACAGAGTAACACCAC 59.307 52.381 0.00 0.00 0.00 4.16
3149 3596 1.691976 CCCAGACAGAGTAACACCACA 59.308 52.381 0.00 0.00 0.00 4.17
3150 3597 2.548067 CCCAGACAGAGTAACACCACAC 60.548 54.545 0.00 0.00 0.00 3.82
3151 3598 2.102420 CCAGACAGAGTAACACCACACA 59.898 50.000 0.00 0.00 0.00 3.72
3152 3599 3.244215 CCAGACAGAGTAACACCACACAT 60.244 47.826 0.00 0.00 0.00 3.21
3153 3600 3.990469 CAGACAGAGTAACACCACACATC 59.010 47.826 0.00 0.00 0.00 3.06
3154 3601 3.641436 AGACAGAGTAACACCACACATCA 59.359 43.478 0.00 0.00 0.00 3.07
3155 3602 4.284490 AGACAGAGTAACACCACACATCAT 59.716 41.667 0.00 0.00 0.00 2.45
3156 3603 4.318332 ACAGAGTAACACCACACATCATG 58.682 43.478 0.00 0.00 0.00 3.07
3157 3604 4.202357 ACAGAGTAACACCACACATCATGT 60.202 41.667 0.00 0.00 44.81 3.21
3158 3605 4.756642 CAGAGTAACACCACACATCATGTT 59.243 41.667 0.00 0.00 40.64 2.71
3159 3606 4.756642 AGAGTAACACCACACATCATGTTG 59.243 41.667 2.12 2.12 40.64 3.33
3160 3607 3.820467 AGTAACACCACACATCATGTTGG 59.180 43.478 14.17 14.17 40.64 3.77
3161 3608 2.363306 ACACCACACATCATGTTGGT 57.637 45.000 15.17 15.17 40.64 3.67
3162 3609 2.229792 ACACCACACATCATGTTGGTC 58.770 47.619 17.09 0.00 40.64 4.02
3163 3610 2.158623 ACACCACACATCATGTTGGTCT 60.159 45.455 17.09 7.52 40.64 3.85
3164 3611 2.227149 CACCACACATCATGTTGGTCTG 59.773 50.000 17.09 7.85 40.64 3.51
3165 3612 2.158623 ACCACACATCATGTTGGTCTGT 60.159 45.455 15.17 1.40 40.64 3.41
3166 3613 3.072330 ACCACACATCATGTTGGTCTGTA 59.928 43.478 15.17 0.00 40.64 2.74
3167 3614 3.436704 CCACACATCATGTTGGTCTGTAC 59.563 47.826 8.58 0.00 40.64 2.90
3168 3615 3.436704 CACACATCATGTTGGTCTGTACC 59.563 47.826 8.58 0.00 42.72 3.34
3169 3616 3.327757 ACACATCATGTTGGTCTGTACCT 59.672 43.478 8.58 0.00 38.98 3.08
3170 3617 3.935203 CACATCATGTTGGTCTGTACCTC 59.065 47.826 8.58 0.00 46.91 3.85
3171 3618 3.055094 ACATCATGTTGGTCTGTACCTCC 60.055 47.826 8.58 0.00 46.91 4.30
3172 3619 2.615391 TCATGTTGGTCTGTACCTCCA 58.385 47.619 0.00 0.00 46.91 3.86
3173 3620 3.181329 TCATGTTGGTCTGTACCTCCAT 58.819 45.455 0.00 0.00 46.91 3.41
3174 3621 3.587061 TCATGTTGGTCTGTACCTCCATT 59.413 43.478 0.00 0.00 46.91 3.16
3175 3622 4.042809 TCATGTTGGTCTGTACCTCCATTT 59.957 41.667 0.00 0.00 46.91 2.32
3176 3623 3.750371 TGTTGGTCTGTACCTCCATTTG 58.250 45.455 0.00 0.00 46.91 2.32
3177 3624 3.137544 TGTTGGTCTGTACCTCCATTTGT 59.862 43.478 0.00 0.00 46.91 2.83
3178 3625 3.695830 TGGTCTGTACCTCCATTTGTC 57.304 47.619 0.00 0.00 46.91 3.18
3179 3626 2.028476 TGGTCTGTACCTCCATTTGTCG 60.028 50.000 0.00 0.00 46.91 4.35
3180 3627 2.232941 GGTCTGTACCTCCATTTGTCGA 59.767 50.000 0.00 0.00 43.08 4.20
3181 3628 3.251571 GTCTGTACCTCCATTTGTCGAC 58.748 50.000 9.11 9.11 0.00 4.20
3182 3629 3.056749 GTCTGTACCTCCATTTGTCGACT 60.057 47.826 17.92 0.00 0.00 4.18
3183 3630 3.056821 TCTGTACCTCCATTTGTCGACTG 60.057 47.826 17.92 6.71 0.00 3.51
3184 3631 2.000447 GTACCTCCATTTGTCGACTGC 59.000 52.381 17.92 0.00 0.00 4.40
3185 3632 0.687354 ACCTCCATTTGTCGACTGCT 59.313 50.000 17.92 0.00 0.00 4.24
3186 3633 1.899814 ACCTCCATTTGTCGACTGCTA 59.100 47.619 17.92 0.00 0.00 3.49
3187 3634 2.271800 CCTCCATTTGTCGACTGCTAC 58.728 52.381 17.92 0.00 0.00 3.58
3188 3635 1.920574 CTCCATTTGTCGACTGCTACG 59.079 52.381 17.92 0.09 0.00 3.51
3189 3636 1.542472 TCCATTTGTCGACTGCTACGA 59.458 47.619 17.92 2.59 37.43 3.43
3190 3637 1.920574 CCATTTGTCGACTGCTACGAG 59.079 52.381 17.92 0.00 40.37 4.18
3191 3638 1.321743 CATTTGTCGACTGCTACGAGC 59.678 52.381 17.92 0.00 42.82 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
162 163 1.892209 ACCCAAAGGCTACAGAAACG 58.108 50.000 0.00 0.00 36.11 3.60
184 185 6.910972 GCGTTTAGGCCTCAGAATAAATTTAC 59.089 38.462 9.68 0.00 0.00 2.01
207 209 8.633075 AATATCACTGTCAATTTTTATTGGCG 57.367 30.769 0.00 0.00 38.88 5.69
222 224 2.808202 GCATCCAGCCGAATATCACTGT 60.808 50.000 0.00 0.00 37.23 3.55
236 238 2.349590 TGAATGACAACGAGCATCCAG 58.650 47.619 0.00 0.00 0.00 3.86
239 241 4.871993 AAGATGAATGACAACGAGCATC 57.128 40.909 0.00 0.00 34.02 3.91
245 247 7.968246 AGATACTTGAAAGATGAATGACAACG 58.032 34.615 0.00 0.00 0.00 4.10
271 273 9.453572 ACAAATATCTCTGCTGTAAATCTTCAA 57.546 29.630 0.00 0.00 0.00 2.69
310 312 1.477553 TTCATTTCATGGAGCCTGGC 58.522 50.000 11.65 11.65 0.00 4.85
322 324 6.272822 AGAGCATAACCCTTGTTTCATTTC 57.727 37.500 0.00 0.00 35.87 2.17
353 355 0.179189 GCATTAGCGTCACCTGTTGC 60.179 55.000 0.00 0.00 0.00 4.17
358 360 5.008019 CAGAATATTTGCATTAGCGTCACCT 59.992 40.000 0.00 0.00 46.23 4.00
406 408 1.965643 AGAAGCTTGCCTGCAATTTGA 59.034 42.857 2.10 0.00 35.20 2.69
464 468 4.143347 CCAACAATTTGAACGCATGCTTAC 60.143 41.667 17.13 7.00 34.24 2.34
468 472 2.402305 TCCAACAATTTGAACGCATGC 58.598 42.857 7.91 7.91 34.24 4.06
469 473 3.899734 TCTCCAACAATTTGAACGCATG 58.100 40.909 2.79 0.00 34.24 4.06
473 477 4.764679 TGGATCTCCAACAATTTGAACG 57.235 40.909 2.79 0.00 44.35 3.95
534 538 7.036996 TCTGCATTAAATTGTGAGTTGTTGA 57.963 32.000 0.00 0.00 0.00 3.18
552 556 1.281287 AGGTCAGCTGTCAATCTGCAT 59.719 47.619 14.67 0.00 42.26 3.96
587 591 8.030692 ACAACAAATTGACCATGTTCAGATATG 58.969 33.333 0.00 0.00 39.30 1.78
607 616 8.594881 TTTTCTTTTCTGCAGTTTAACAACAA 57.405 26.923 14.67 0.00 35.05 2.83
628 637 4.036144 GCCTCTCTCTGTGCCATAATTTTC 59.964 45.833 0.00 0.00 0.00 2.29
634 643 1.342374 TGAGCCTCTCTCTGTGCCATA 60.342 52.381 0.00 0.00 42.38 2.74
635 644 0.616964 TGAGCCTCTCTCTGTGCCAT 60.617 55.000 0.00 0.00 42.38 4.40
636 645 1.228988 TGAGCCTCTCTCTGTGCCA 60.229 57.895 0.00 0.00 42.38 4.92
637 646 1.217779 GTGAGCCTCTCTCTGTGCC 59.782 63.158 0.00 0.00 42.38 5.01
638 647 0.319728 TTGTGAGCCTCTCTCTGTGC 59.680 55.000 0.00 0.00 42.38 4.57
673 683 8.608844 AAGATGAAGAAAAGTGAGTATTTCGT 57.391 30.769 0.00 0.00 39.83 3.85
749 759 9.995003 AAATGCAGGTTTTAAAATTGTAGATGA 57.005 25.926 3.52 0.00 0.00 2.92
764 774 5.778862 AGTAACGCAATAAAATGCAGGTTT 58.221 33.333 0.00 0.00 46.76 3.27
765 775 5.385509 AGTAACGCAATAAAATGCAGGTT 57.614 34.783 0.00 0.00 46.76 3.50
794 842 6.100279 AGTCATGCCCAATCTAACTTCAGATA 59.900 38.462 0.00 0.00 34.08 1.98
804 852 4.716784 AGTAGTTCAGTCATGCCCAATCTA 59.283 41.667 0.00 0.00 0.00 1.98
830 878 6.947733 TGGATGAAAAGAGAGCTTCCAATAAA 59.052 34.615 0.00 0.00 34.24 1.40
846 894 6.957920 TCTTGACATTCTTGTGGATGAAAA 57.042 33.333 0.00 0.00 35.79 2.29
850 898 4.763793 ACCTTCTTGACATTCTTGTGGATG 59.236 41.667 0.00 0.00 35.79 3.51
851 899 4.763793 CACCTTCTTGACATTCTTGTGGAT 59.236 41.667 0.00 0.00 35.79 3.41
852 900 4.136796 CACCTTCTTGACATTCTTGTGGA 58.863 43.478 0.00 0.00 35.79 4.02
879 928 1.681264 AGGTAGCTTTGTTGTGGTTGC 59.319 47.619 0.00 0.00 0.00 4.17
921 971 9.894783 GATCGTAGTATTTTATACAGAGAGCAA 57.105 33.333 0.00 0.00 0.00 3.91
935 985 7.036220 CCAGAAAGAGTGTGATCGTAGTATTT 58.964 38.462 0.00 0.00 0.00 1.40
936 986 6.377429 TCCAGAAAGAGTGTGATCGTAGTATT 59.623 38.462 0.00 0.00 0.00 1.89
944 994 4.249661 GGTTCTCCAGAAAGAGTGTGATC 58.750 47.826 0.00 0.00 35.58 2.92
965 1015 2.386661 AGCCTTGTCGTGATACTTGG 57.613 50.000 0.00 0.00 0.00 3.61
979 1029 6.779860 TCATTTAGACCTTGTCTTAAGCCTT 58.220 36.000 1.58 0.00 40.28 4.35
1119 1169 1.003545 CTTGGACACGTTGCTCTTGTG 60.004 52.381 0.00 0.00 39.47 3.33
1126 1177 0.317020 GCAAGTCTTGGACACGTTGC 60.317 55.000 14.40 7.14 35.36 4.17
1144 1195 2.677836 TGCATGATAACCTTCAGAACGC 59.322 45.455 0.00 0.00 0.00 4.84
1145 1196 3.935203 AGTGCATGATAACCTTCAGAACG 59.065 43.478 0.00 0.00 0.00 3.95
1187 1238 3.763360 TCACCCCGTCGTTAATCTTCTTA 59.237 43.478 0.00 0.00 0.00 2.10
1196 1247 1.619654 TCTCTTTCACCCCGTCGTTA 58.380 50.000 0.00 0.00 0.00 3.18
1254 1305 4.579753 TCAGTCTATCACAGAGAGATGCTG 59.420 45.833 0.00 0.00 32.45 4.41
1306 1357 2.426381 TGCAACAGAAGACATGCACAAA 59.574 40.909 0.00 0.00 43.32 2.83
1310 1361 1.605232 CAGTGCAACAGAAGACATGCA 59.395 47.619 0.00 0.00 45.75 3.96
1338 1389 8.542080 TCATGAAGGCCAAAATTTAGATCATTT 58.458 29.630 5.01 0.00 0.00 2.32
1364 1415 1.923148 CCCTCTCCACCCCTTTGTAAT 59.077 52.381 0.00 0.00 0.00 1.89
1368 1419 2.234296 AGCCCTCTCCACCCCTTTG 61.234 63.158 0.00 0.00 0.00 2.77
1369 1420 2.211279 AGCCCTCTCCACCCCTTT 59.789 61.111 0.00 0.00 0.00 3.11
1389 1440 1.459348 TGCTGTCTCCACCACCAGA 60.459 57.895 0.00 0.00 0.00 3.86
1404 1455 1.107114 CGACCACTATCACCTCTGCT 58.893 55.000 0.00 0.00 0.00 4.24
1452 1503 3.882288 TCTGTGTTAGTTCATGCAGCAAA 59.118 39.130 0.00 0.00 0.00 3.68
1470 1521 5.645497 GGTTTCTATCTTCACATGCTTCTGT 59.355 40.000 0.00 0.00 0.00 3.41
1506 1557 1.014564 CCGCAGTTTCTCCTTCGGAC 61.015 60.000 0.00 0.00 39.23 4.79
1509 1560 0.951040 AAGCCGCAGTTTCTCCTTCG 60.951 55.000 0.00 0.00 0.00 3.79
1531 1582 1.894756 CGCGGTTCTTGGTTTCCCA 60.895 57.895 0.00 0.00 39.65 4.37
1549 1600 4.464597 TGAAAATAATGGTACCTGGCCAAC 59.535 41.667 14.36 1.21 39.72 3.77
1566 1617 6.281405 ACGATCGACTTATTAGCCTGAAAAT 58.719 36.000 24.34 0.00 0.00 1.82
1625 1676 9.782900 TCCTACCACCATTATATCATTAGATCA 57.217 33.333 0.00 0.00 35.67 2.92
1633 1684 9.387397 TCTGTATTTCCTACCACCATTATATCA 57.613 33.333 0.00 0.00 0.00 2.15
1634 1685 9.877178 CTCTGTATTTCCTACCACCATTATATC 57.123 37.037 0.00 0.00 0.00 1.63
1637 1688 6.330250 AGCTCTGTATTTCCTACCACCATTAT 59.670 38.462 0.00 0.00 0.00 1.28
1638 1689 5.665812 AGCTCTGTATTTCCTACCACCATTA 59.334 40.000 0.00 0.00 0.00 1.90
1639 1690 4.475016 AGCTCTGTATTTCCTACCACCATT 59.525 41.667 0.00 0.00 0.00 3.16
1674 1725 2.534939 CGAAACGAATGCTCAACCGATC 60.535 50.000 0.00 0.00 0.00 3.69
1681 1732 0.320374 AGGACCGAAACGAATGCTCA 59.680 50.000 0.00 0.00 0.00 4.26
1694 1745 4.452455 GGAATAACTGCATCAATAGGACCG 59.548 45.833 0.00 0.00 0.00 4.79
1802 1886 0.254178 AATGGGTAGCTCAGCAGGTG 59.746 55.000 0.00 0.00 0.00 4.00
1851 1941 4.206477 TGATGTGGTTGTACTCTGGATG 57.794 45.455 0.00 0.00 0.00 3.51
1852 1942 4.774124 CATGATGTGGTTGTACTCTGGAT 58.226 43.478 0.00 0.00 0.00 3.41
1853 1943 3.619733 GCATGATGTGGTTGTACTCTGGA 60.620 47.826 0.00 0.00 0.00 3.86
1854 1944 2.679837 GCATGATGTGGTTGTACTCTGG 59.320 50.000 0.00 0.00 0.00 3.86
1855 1945 3.603532 AGCATGATGTGGTTGTACTCTG 58.396 45.455 0.00 0.00 34.12 3.35
1856 1946 3.677148 CGAGCATGATGTGGTTGTACTCT 60.677 47.826 0.00 0.00 39.00 3.24
1857 1947 2.604914 CGAGCATGATGTGGTTGTACTC 59.395 50.000 0.00 0.00 39.00 2.59
1858 1948 2.621338 CGAGCATGATGTGGTTGTACT 58.379 47.619 0.00 0.00 39.00 2.73
1861 1951 3.631453 ACGAGCATGATGTGGTTGT 57.369 47.368 0.00 0.00 45.76 3.32
1862 1952 4.345288 CAAATACGAGCATGATGTGGTTG 58.655 43.478 0.00 0.00 43.85 3.77
1863 1953 3.181497 GCAAATACGAGCATGATGTGGTT 60.181 43.478 0.00 0.00 39.00 3.67
1864 1954 2.355756 GCAAATACGAGCATGATGTGGT 59.644 45.455 0.00 0.00 42.28 4.16
1875 1965 4.191544 TGAGAAATGGAGGCAAATACGAG 58.808 43.478 0.00 0.00 0.00 4.18
1907 1997 3.206866 ACCTACTATCTCCCTACTTGGCA 59.793 47.826 0.00 0.00 0.00 4.92
1918 2008 5.317808 TCATAGCTGGTGACCTACTATCTC 58.682 45.833 12.19 0.00 0.00 2.75
2053 2153 2.275380 GGGAATTGGTGGTGCGCTT 61.275 57.895 9.73 0.00 0.00 4.68
2062 2162 2.046314 CACGCCTCGGGAATTGGT 60.046 61.111 0.00 0.00 28.17 3.67
2077 2177 1.294780 CACAGTCAGGCTCCTCCAC 59.705 63.158 0.00 0.00 37.29 4.02
2088 2188 0.471780 TCTCTGGGAAGGCACAGTCA 60.472 55.000 0.00 0.00 45.94 3.41
2092 2192 1.300963 GCATCTCTGGGAAGGCACA 59.699 57.895 0.27 0.00 0.00 4.57
2161 2261 1.866015 TTGTCCCCTCGATGTCAGAT 58.134 50.000 0.00 0.00 0.00 2.90
2227 2327 2.111878 ACGGAGTGCAGCAGCTTT 59.888 55.556 1.76 0.00 42.51 3.51
2242 2343 1.213094 ACAAAGCGAAGGTGACGACG 61.213 55.000 0.00 0.00 39.47 5.12
2277 2379 0.318869 CAGAAAATGCTTGCACGGCA 60.319 50.000 14.62 14.62 44.05 5.69
2278 2380 2.437850 CAGAAAATGCTTGCACGGC 58.562 52.632 0.00 4.11 0.00 5.68
2320 2422 6.542370 CCATTAGGTCACGGATAGAAACAAAT 59.458 38.462 0.00 0.00 0.00 2.32
2337 2439 1.453745 CATGCCCGTGCCATTAGGT 60.454 57.895 0.00 0.00 37.19 3.08
2339 2441 1.789078 GAGCATGCCCGTGCCATTAG 61.789 60.000 15.66 0.00 46.19 1.73
2345 2447 1.589716 AAAAGAGAGCATGCCCGTGC 61.590 55.000 15.66 4.34 45.38 5.34
2375 2477 1.069022 ACTGCACAACATCACGAATGC 60.069 47.619 0.00 0.00 39.12 3.56
2400 2603 4.410555 ACACTTCTCCCCTGAATTCCTATC 59.589 45.833 2.27 0.00 0.00 2.08
2409 2612 2.111972 ACTTCCTACACTTCTCCCCTGA 59.888 50.000 0.00 0.00 0.00 3.86
2448 2651 1.002134 AGCCCATTGACACGAAGGG 60.002 57.895 0.00 0.00 42.55 3.95
2452 2655 2.359850 GCCAGCCCATTGACACGA 60.360 61.111 0.00 0.00 0.00 4.35
2476 2679 0.957888 GCAGCAAAGACTCCCCACTC 60.958 60.000 0.00 0.00 0.00 3.51
2560 3007 6.530181 GGTTTTGACCAACTCACTTAAGTTTG 59.470 38.462 5.07 8.37 37.38 2.93
2574 3021 2.028020 GTGGGTTGTTGGTTTTGACCAA 60.028 45.455 6.91 6.91 46.50 3.67
2575 3022 1.550976 GTGGGTTGTTGGTTTTGACCA 59.449 47.619 0.00 0.00 38.14 4.02
2576 3023 1.550976 TGTGGGTTGTTGGTTTTGACC 59.449 47.619 0.00 0.00 0.00 4.02
2577 3024 2.232696 ACTGTGGGTTGTTGGTTTTGAC 59.767 45.455 0.00 0.00 0.00 3.18
2578 3025 2.530701 ACTGTGGGTTGTTGGTTTTGA 58.469 42.857 0.00 0.00 0.00 2.69
2579 3026 3.326836 AACTGTGGGTTGTTGGTTTTG 57.673 42.857 0.00 0.00 36.70 2.44
2580 3027 5.485209 TTAAACTGTGGGTTGTTGGTTTT 57.515 34.783 0.00 0.00 38.29 2.43
2581 3028 5.423886 CATTAAACTGTGGGTTGTTGGTTT 58.576 37.500 0.00 0.00 38.29 3.27
2582 3029 4.682050 GCATTAAACTGTGGGTTGTTGGTT 60.682 41.667 0.00 0.00 38.29 3.67
2583 3030 3.181470 GCATTAAACTGTGGGTTGTTGGT 60.181 43.478 0.00 0.00 38.29 3.67
2584 3031 3.181471 TGCATTAAACTGTGGGTTGTTGG 60.181 43.478 0.00 0.00 38.29 3.77
2585 3032 4.050553 CTGCATTAAACTGTGGGTTGTTG 58.949 43.478 0.00 0.00 38.29 3.33
2586 3033 3.957497 TCTGCATTAAACTGTGGGTTGTT 59.043 39.130 0.00 0.00 38.29 2.83
2587 3034 3.561143 TCTGCATTAAACTGTGGGTTGT 58.439 40.909 0.00 0.00 38.29 3.32
2588 3035 4.789012 ATCTGCATTAAACTGTGGGTTG 57.211 40.909 0.00 0.00 38.29 3.77
2589 3036 4.832266 TCAATCTGCATTAAACTGTGGGTT 59.168 37.500 0.00 0.00 40.28 4.11
2590 3037 4.218417 GTCAATCTGCATTAAACTGTGGGT 59.782 41.667 0.00 0.00 0.00 4.51
2591 3038 4.218200 TGTCAATCTGCATTAAACTGTGGG 59.782 41.667 0.00 0.00 0.00 4.61
2592 3039 5.375417 TGTCAATCTGCATTAAACTGTGG 57.625 39.130 0.00 0.00 0.00 4.17
2593 3040 4.855388 GCTGTCAATCTGCATTAAACTGTG 59.145 41.667 0.00 0.00 40.09 3.66
2594 3041 4.763793 AGCTGTCAATCTGCATTAAACTGT 59.236 37.500 0.00 0.00 42.26 3.55
2595 3042 5.093457 CAGCTGTCAATCTGCATTAAACTG 58.907 41.667 5.25 0.00 42.26 3.16
2596 3043 5.005740 TCAGCTGTCAATCTGCATTAAACT 58.994 37.500 14.67 0.00 42.26 2.66
2597 3044 5.091431 GTCAGCTGTCAATCTGCATTAAAC 58.909 41.667 14.67 0.00 42.26 2.01
2598 3045 4.156556 GGTCAGCTGTCAATCTGCATTAAA 59.843 41.667 14.67 0.00 42.26 1.52
2599 3046 3.691118 GGTCAGCTGTCAATCTGCATTAA 59.309 43.478 14.67 0.00 42.26 1.40
2600 3047 3.054875 AGGTCAGCTGTCAATCTGCATTA 60.055 43.478 14.67 0.00 42.26 1.90
2601 3048 2.089980 GGTCAGCTGTCAATCTGCATT 58.910 47.619 14.67 0.00 42.26 3.56
2602 3049 1.281287 AGGTCAGCTGTCAATCTGCAT 59.719 47.619 14.67 0.00 42.26 3.96
2603 3050 0.689055 AGGTCAGCTGTCAATCTGCA 59.311 50.000 14.67 0.00 42.26 4.41
2604 3051 2.675348 GTTAGGTCAGCTGTCAATCTGC 59.325 50.000 14.67 0.00 40.54 4.26
2605 3052 4.081752 AGAGTTAGGTCAGCTGTCAATCTG 60.082 45.833 14.67 0.00 0.00 2.90
2606 3053 4.081752 CAGAGTTAGGTCAGCTGTCAATCT 60.082 45.833 14.67 2.44 0.00 2.40
2607 3054 4.180057 CAGAGTTAGGTCAGCTGTCAATC 58.820 47.826 14.67 1.46 0.00 2.67
2608 3055 3.580458 ACAGAGTTAGGTCAGCTGTCAAT 59.420 43.478 14.67 3.42 35.02 2.57
2609 3056 2.965831 ACAGAGTTAGGTCAGCTGTCAA 59.034 45.455 14.67 0.90 35.02 3.18
2610 3057 2.598565 ACAGAGTTAGGTCAGCTGTCA 58.401 47.619 14.67 0.00 35.02 3.58
2611 3058 3.321497 CAACAGAGTTAGGTCAGCTGTC 58.679 50.000 14.67 8.19 38.74 3.51
2612 3059 2.037772 CCAACAGAGTTAGGTCAGCTGT 59.962 50.000 14.67 0.00 41.19 4.40
2613 3060 2.300152 TCCAACAGAGTTAGGTCAGCTG 59.700 50.000 7.63 7.63 0.00 4.24
2614 3061 2.609747 TCCAACAGAGTTAGGTCAGCT 58.390 47.619 0.00 0.00 0.00 4.24
2615 3062 3.402628 TTCCAACAGAGTTAGGTCAGC 57.597 47.619 0.00 0.00 0.00 4.26
2616 3063 9.482627 GATATAATTCCAACAGAGTTAGGTCAG 57.517 37.037 0.00 0.00 31.00 3.51
2617 3064 9.213777 AGATATAATTCCAACAGAGTTAGGTCA 57.786 33.333 0.00 0.00 31.00 4.02
2618 3065 9.482627 CAGATATAATTCCAACAGAGTTAGGTC 57.517 37.037 0.00 0.00 31.00 3.85
2619 3066 9.213777 TCAGATATAATTCCAACAGAGTTAGGT 57.786 33.333 0.00 0.00 31.00 3.08
2623 3070 9.167311 GTGTTCAGATATAATTCCAACAGAGTT 57.833 33.333 0.00 0.00 0.00 3.01
2624 3071 8.543774 AGTGTTCAGATATAATTCCAACAGAGT 58.456 33.333 0.00 0.00 0.00 3.24
2625 3072 8.954950 AGTGTTCAGATATAATTCCAACAGAG 57.045 34.615 0.00 0.00 0.00 3.35
2626 3073 9.383519 GAAGTGTTCAGATATAATTCCAACAGA 57.616 33.333 0.00 0.00 0.00 3.41
2627 3074 9.166173 TGAAGTGTTCAGATATAATTCCAACAG 57.834 33.333 0.00 0.00 34.08 3.16
2628 3075 9.685276 ATGAAGTGTTCAGATATAATTCCAACA 57.315 29.630 0.00 0.00 43.98 3.33
2629 3076 9.941664 CATGAAGTGTTCAGATATAATTCCAAC 57.058 33.333 0.00 0.00 43.98 3.77
2630 3077 9.123902 CCATGAAGTGTTCAGATATAATTCCAA 57.876 33.333 0.00 0.00 43.98 3.53
2631 3078 8.274322 ACCATGAAGTGTTCAGATATAATTCCA 58.726 33.333 0.00 0.00 43.98 3.53
2632 3079 8.682936 ACCATGAAGTGTTCAGATATAATTCC 57.317 34.615 0.00 0.00 43.98 3.01
2633 3080 9.330063 TGACCATGAAGTGTTCAGATATAATTC 57.670 33.333 0.00 0.00 43.98 2.17
2634 3081 9.685276 TTGACCATGAAGTGTTCAGATATAATT 57.315 29.630 0.00 0.00 43.98 1.40
2635 3082 9.857656 ATTGACCATGAAGTGTTCAGATATAAT 57.142 29.630 0.00 0.00 43.98 1.28
2636 3083 9.112725 CATTGACCATGAAGTGTTCAGATATAA 57.887 33.333 0.00 0.00 43.98 0.98
2637 3084 7.227314 GCATTGACCATGAAGTGTTCAGATATA 59.773 37.037 0.00 0.00 43.98 0.86
2638 3085 6.039047 GCATTGACCATGAAGTGTTCAGATAT 59.961 38.462 0.00 0.00 43.98 1.63
2639 3086 5.355071 GCATTGACCATGAAGTGTTCAGATA 59.645 40.000 0.00 0.00 43.98 1.98
2640 3087 4.157289 GCATTGACCATGAAGTGTTCAGAT 59.843 41.667 0.00 0.00 43.98 2.90
2641 3088 3.503363 GCATTGACCATGAAGTGTTCAGA 59.497 43.478 0.00 0.00 43.98 3.27
2642 3089 3.668757 CGCATTGACCATGAAGTGTTCAG 60.669 47.826 0.00 0.00 43.98 3.02
2643 3090 2.226200 CGCATTGACCATGAAGTGTTCA 59.774 45.455 0.00 0.00 45.01 3.18
2644 3091 2.855180 CGCATTGACCATGAAGTGTTC 58.145 47.619 0.00 0.00 34.31 3.18
2645 3092 1.068333 GCGCATTGACCATGAAGTGTT 60.068 47.619 0.30 0.00 34.31 3.32
2646 3093 0.523072 GCGCATTGACCATGAAGTGT 59.477 50.000 0.30 0.00 34.31 3.55
2647 3094 0.806868 AGCGCATTGACCATGAAGTG 59.193 50.000 11.47 0.00 34.31 3.16
2648 3095 0.806868 CAGCGCATTGACCATGAAGT 59.193 50.000 11.47 0.00 34.31 3.01
2649 3096 0.806868 ACAGCGCATTGACCATGAAG 59.193 50.000 11.47 0.00 34.31 3.02
2650 3097 1.246649 AACAGCGCATTGACCATGAA 58.753 45.000 11.47 0.00 34.31 2.57
2678 3125 2.105006 TGTGCTCTCATTCTCCTTGC 57.895 50.000 0.00 0.00 0.00 4.01
2679 3126 3.935315 TCTTGTGCTCTCATTCTCCTTG 58.065 45.455 0.00 0.00 0.00 3.61
2682 3129 4.199432 TCTTCTTGTGCTCTCATTCTCC 57.801 45.455 0.00 0.00 0.00 3.71
2687 3134 3.598299 GAGCTTCTTCTTGTGCTCTCAT 58.402 45.455 6.58 0.00 45.78 2.90
2692 3139 2.926778 AGTGAGCTTCTTCTTGTGCT 57.073 45.000 0.00 0.00 38.59 4.40
2695 3142 3.323403 AGCAGTAGTGAGCTTCTTCTTGT 59.677 43.478 0.42 0.00 38.01 3.16
2725 3172 6.595716 GTGAATAGAAGTCAGTAGTTTGCCAT 59.404 38.462 0.00 0.00 0.00 4.40
2750 3197 8.794308 AACACACAAATTTTCAAAAACAAAGG 57.206 26.923 0.00 0.00 0.00 3.11
2766 3213 5.362430 AGGCTTTTATCTGGAAACACACAAA 59.638 36.000 0.00 0.00 35.60 2.83
2802 3249 5.526111 TGCAGGTTCAAAGTTGTAGAAGTAC 59.474 40.000 0.00 0.00 0.00 2.73
2808 3255 5.830912 TGAAATGCAGGTTCAAAGTTGTAG 58.169 37.500 12.02 0.00 32.13 2.74
2814 3261 7.622672 GCAATGTAATGAAATGCAGGTTCAAAG 60.623 37.037 16.91 6.17 38.44 2.77
2818 3265 4.567959 GGCAATGTAATGAAATGCAGGTTC 59.432 41.667 6.06 6.06 38.73 3.62
2875 3322 9.689976 TCAGATAGTCAGTAGTACGTTACTATC 57.310 37.037 25.89 25.89 42.68 2.08
2878 3325 8.040132 ACTTCAGATAGTCAGTAGTACGTTACT 58.960 37.037 0.00 0.00 42.68 2.24
2879 3326 8.195617 ACTTCAGATAGTCAGTAGTACGTTAC 57.804 38.462 0.00 0.00 0.00 2.50
2880 3327 8.417780 GACTTCAGATAGTCAGTAGTACGTTA 57.582 38.462 0.00 0.00 43.23 3.18
2881 3328 7.306205 GACTTCAGATAGTCAGTAGTACGTT 57.694 40.000 0.00 0.00 43.23 3.99
2882 3329 6.907206 GACTTCAGATAGTCAGTAGTACGT 57.093 41.667 0.00 0.00 43.23 3.57
2892 3339 4.081972 TGCTCAACCTGACTTCAGATAGTC 60.082 45.833 7.87 0.00 46.59 2.59
2893 3340 3.834813 TGCTCAACCTGACTTCAGATAGT 59.165 43.478 7.87 0.00 46.59 2.12
2894 3341 4.462508 TGCTCAACCTGACTTCAGATAG 57.537 45.455 7.87 1.31 46.59 2.08
2895 3342 4.467438 TCATGCTCAACCTGACTTCAGATA 59.533 41.667 7.87 0.00 46.59 1.98
2896 3343 3.262660 TCATGCTCAACCTGACTTCAGAT 59.737 43.478 7.87 0.00 46.59 2.90
2897 3344 2.634453 TCATGCTCAACCTGACTTCAGA 59.366 45.455 7.87 0.00 46.59 3.27
2898 3345 2.740981 GTCATGCTCAACCTGACTTCAG 59.259 50.000 0.00 0.00 43.40 3.02
2899 3346 2.369860 AGTCATGCTCAACCTGACTTCA 59.630 45.455 0.00 0.00 45.49 3.02
2900 3347 3.051081 AGTCATGCTCAACCTGACTTC 57.949 47.619 0.00 0.00 45.49 3.01
2903 3350 1.067565 TCGAGTCATGCTCAACCTGAC 60.068 52.381 14.69 0.00 44.33 3.51
2904 3351 1.203287 CTCGAGTCATGCTCAACCTGA 59.797 52.381 3.62 5.32 44.33 3.86
2905 3352 1.067283 ACTCGAGTCATGCTCAACCTG 60.067 52.381 13.58 2.03 44.33 4.00
2906 3353 1.203523 GACTCGAGTCATGCTCAACCT 59.796 52.381 34.97 1.62 44.33 3.50
2907 3354 1.634702 GACTCGAGTCATGCTCAACC 58.365 55.000 34.97 9.09 44.33 3.77
2917 3364 1.919918 CAGCCAATCTGACTCGAGTC 58.080 55.000 33.76 33.76 45.72 3.36
2918 3365 0.108424 GCAGCCAATCTGACTCGAGT 60.108 55.000 20.18 20.18 45.72 4.18
2919 3366 0.175302 AGCAGCCAATCTGACTCGAG 59.825 55.000 11.84 11.84 45.72 4.04
2920 3367 0.108472 CAGCAGCCAATCTGACTCGA 60.108 55.000 0.00 0.00 45.72 4.04
2921 3368 0.390866 ACAGCAGCCAATCTGACTCG 60.391 55.000 0.00 0.00 45.72 4.18
2922 3369 1.467734 CAACAGCAGCCAATCTGACTC 59.532 52.381 0.00 0.00 45.72 3.36
2923 3370 1.072806 TCAACAGCAGCCAATCTGACT 59.927 47.619 0.00 0.00 45.72 3.41
2924 3371 1.527034 TCAACAGCAGCCAATCTGAC 58.473 50.000 0.00 0.00 45.72 3.51
2925 3372 2.275134 TTCAACAGCAGCCAATCTGA 57.725 45.000 0.00 0.00 45.72 3.27
2926 3373 2.159282 GGATTCAACAGCAGCCAATCTG 60.159 50.000 0.00 0.00 45.62 2.90
2927 3374 2.097825 GGATTCAACAGCAGCCAATCT 58.902 47.619 0.00 0.00 0.00 2.40
2928 3375 1.202222 CGGATTCAACAGCAGCCAATC 60.202 52.381 0.00 0.00 0.00 2.67
2929 3376 0.813184 CGGATTCAACAGCAGCCAAT 59.187 50.000 0.00 0.00 0.00 3.16
2930 3377 0.537143 ACGGATTCAACAGCAGCCAA 60.537 50.000 0.00 0.00 0.00 4.52
2931 3378 0.537143 AACGGATTCAACAGCAGCCA 60.537 50.000 0.00 0.00 0.00 4.75
2932 3379 0.109597 CAACGGATTCAACAGCAGCC 60.110 55.000 0.00 0.00 0.00 4.85
2933 3380 0.874390 TCAACGGATTCAACAGCAGC 59.126 50.000 0.00 0.00 0.00 5.25
2934 3381 1.135859 GCTCAACGGATTCAACAGCAG 60.136 52.381 0.00 0.00 0.00 4.24
2935 3382 0.874390 GCTCAACGGATTCAACAGCA 59.126 50.000 0.00 0.00 0.00 4.41
2936 3383 0.874390 TGCTCAACGGATTCAACAGC 59.126 50.000 0.00 0.00 0.00 4.40
2937 3384 3.751621 GAATGCTCAACGGATTCAACAG 58.248 45.455 2.01 0.00 46.26 3.16
2938 3385 3.829886 GAATGCTCAACGGATTCAACA 57.170 42.857 2.01 0.00 46.26 3.33
2942 3389 2.223044 GGAACGAATGCTCAACGGATTC 60.223 50.000 0.00 0.00 44.32 2.52
2943 3390 1.737793 GGAACGAATGCTCAACGGATT 59.262 47.619 0.00 0.00 36.27 3.01
2944 3391 1.369625 GGAACGAATGCTCAACGGAT 58.630 50.000 0.00 0.00 0.00 4.18
2945 3392 2.835605 GGAACGAATGCTCAACGGA 58.164 52.632 0.00 0.00 0.00 4.69
2958 3405 4.963683 CTGCATAGACAGGACCGGAACG 62.964 59.091 9.46 0.00 42.56 3.95
2959 3406 0.535335 TGCATAGACAGGACCGGAAC 59.465 55.000 9.46 0.00 0.00 3.62
2960 3407 0.824109 CTGCATAGACAGGACCGGAA 59.176 55.000 9.46 0.00 33.85 4.30
2961 3408 0.324368 ACTGCATAGACAGGACCGGA 60.324 55.000 9.46 0.00 42.21 5.14
2962 3409 0.179100 CACTGCATAGACAGGACCGG 60.179 60.000 0.00 0.00 42.21 5.28
2963 3410 0.532573 ACACTGCATAGACAGGACCG 59.467 55.000 0.00 0.00 42.21 4.79
2964 3411 2.234908 AGAACACTGCATAGACAGGACC 59.765 50.000 0.00 0.00 42.21 4.46
2965 3412 3.601443 AGAACACTGCATAGACAGGAC 57.399 47.619 0.00 0.00 42.21 3.85
2966 3413 3.055819 GGAAGAACACTGCATAGACAGGA 60.056 47.826 0.00 0.00 42.21 3.86
2967 3414 3.055530 AGGAAGAACACTGCATAGACAGG 60.056 47.826 0.00 0.00 42.21 4.00
2968 3415 4.199432 AGGAAGAACACTGCATAGACAG 57.801 45.455 0.00 0.00 43.59 3.51
2969 3416 4.040339 TGAAGGAAGAACACTGCATAGACA 59.960 41.667 0.00 0.00 0.00 3.41
2970 3417 4.569943 TGAAGGAAGAACACTGCATAGAC 58.430 43.478 0.00 0.00 0.00 2.59
2971 3418 4.890158 TGAAGGAAGAACACTGCATAGA 57.110 40.909 0.00 0.00 0.00 1.98
2972 3419 4.201891 GCATGAAGGAAGAACACTGCATAG 60.202 45.833 0.00 0.00 31.17 2.23
2973 3420 3.691118 GCATGAAGGAAGAACACTGCATA 59.309 43.478 0.00 0.00 31.17 3.14
2974 3421 2.490903 GCATGAAGGAAGAACACTGCAT 59.509 45.455 0.00 0.00 33.18 3.96
2975 3422 1.881973 GCATGAAGGAAGAACACTGCA 59.118 47.619 0.00 0.00 0.00 4.41
2976 3423 1.200948 GGCATGAAGGAAGAACACTGC 59.799 52.381 0.00 0.00 0.00 4.40
2977 3424 1.815003 GGGCATGAAGGAAGAACACTG 59.185 52.381 0.00 0.00 0.00 3.66
2978 3425 1.611673 CGGGCATGAAGGAAGAACACT 60.612 52.381 0.00 0.00 0.00 3.55
2979 3426 0.804989 CGGGCATGAAGGAAGAACAC 59.195 55.000 0.00 0.00 0.00 3.32
2980 3427 0.400213 ACGGGCATGAAGGAAGAACA 59.600 50.000 0.00 0.00 0.00 3.18
2981 3428 1.087501 GACGGGCATGAAGGAAGAAC 58.912 55.000 0.00 0.00 0.00 3.01
2982 3429 0.984230 AGACGGGCATGAAGGAAGAA 59.016 50.000 0.00 0.00 0.00 2.52
2983 3430 0.984230 AAGACGGGCATGAAGGAAGA 59.016 50.000 0.00 0.00 0.00 2.87
2984 3431 1.373570 GAAGACGGGCATGAAGGAAG 58.626 55.000 0.00 0.00 0.00 3.46
2985 3432 0.035439 GGAAGACGGGCATGAAGGAA 60.035 55.000 0.00 0.00 0.00 3.36
2986 3433 1.602237 GGAAGACGGGCATGAAGGA 59.398 57.895 0.00 0.00 0.00 3.36
2987 3434 1.815421 CGGAAGACGGGCATGAAGG 60.815 63.158 0.00 0.00 39.42 3.46
2988 3435 2.464459 GCGGAAGACGGGCATGAAG 61.464 63.158 0.00 0.00 44.51 3.02
2989 3436 2.435938 GCGGAAGACGGGCATGAA 60.436 61.111 0.00 0.00 44.51 2.57
2990 3437 3.390521 AGCGGAAGACGGGCATGA 61.391 61.111 0.00 0.00 44.51 3.07
2991 3438 3.197790 CAGCGGAAGACGGGCATG 61.198 66.667 0.00 0.00 44.51 4.06
2992 3439 4.473520 CCAGCGGAAGACGGGCAT 62.474 66.667 0.00 0.00 44.51 4.40
2995 3442 2.725203 TTTCACCAGCGGAAGACGGG 62.725 60.000 1.50 0.00 44.51 5.28
2996 3443 1.301401 TTTCACCAGCGGAAGACGG 60.301 57.895 1.50 0.00 44.51 4.79
2998 3445 1.305201 TTGTTTCACCAGCGGAAGAC 58.695 50.000 1.50 0.00 0.00 3.01
2999 3446 2.270352 ATTGTTTCACCAGCGGAAGA 57.730 45.000 1.50 0.00 0.00 2.87
3000 3447 3.334691 TCTATTGTTTCACCAGCGGAAG 58.665 45.455 1.50 0.00 0.00 3.46
3001 3448 3.410631 TCTATTGTTTCACCAGCGGAA 57.589 42.857 1.50 0.00 0.00 4.30
3002 3449 3.270027 CATCTATTGTTTCACCAGCGGA 58.730 45.455 1.50 0.00 0.00 5.54
3003 3450 2.223340 GCATCTATTGTTTCACCAGCGG 60.223 50.000 0.00 0.00 0.00 5.52
3004 3451 2.419673 TGCATCTATTGTTTCACCAGCG 59.580 45.455 0.00 0.00 0.00 5.18
3005 3452 4.644103 ATGCATCTATTGTTTCACCAGC 57.356 40.909 0.00 0.00 0.00 4.85
3006 3453 6.017605 GTCCTATGCATCTATTGTTTCACCAG 60.018 42.308 0.19 0.00 0.00 4.00
3007 3454 5.822519 GTCCTATGCATCTATTGTTTCACCA 59.177 40.000 0.19 0.00 0.00 4.17
3008 3455 5.822519 TGTCCTATGCATCTATTGTTTCACC 59.177 40.000 0.19 0.00 0.00 4.02
3009 3456 6.540189 AGTGTCCTATGCATCTATTGTTTCAC 59.460 38.462 0.19 2.40 0.00 3.18
3010 3457 6.539826 CAGTGTCCTATGCATCTATTGTTTCA 59.460 38.462 0.19 0.00 0.00 2.69
3011 3458 6.763135 TCAGTGTCCTATGCATCTATTGTTTC 59.237 38.462 0.19 0.00 0.00 2.78
3012 3459 6.653020 TCAGTGTCCTATGCATCTATTGTTT 58.347 36.000 0.19 0.00 0.00 2.83
3013 3460 6.239217 TCAGTGTCCTATGCATCTATTGTT 57.761 37.500 0.19 0.00 0.00 2.83
3014 3461 5.876651 TCAGTGTCCTATGCATCTATTGT 57.123 39.130 0.19 0.00 0.00 2.71
3015 3462 6.709397 ACATTCAGTGTCCTATGCATCTATTG 59.291 38.462 0.19 0.00 35.77 1.90
3016 3463 6.835174 ACATTCAGTGTCCTATGCATCTATT 58.165 36.000 0.19 0.00 35.77 1.73
3017 3464 6.430962 ACATTCAGTGTCCTATGCATCTAT 57.569 37.500 0.19 0.00 35.77 1.98
3018 3465 5.876651 ACATTCAGTGTCCTATGCATCTA 57.123 39.130 0.19 0.00 35.77 1.98
3019 3466 4.767578 ACATTCAGTGTCCTATGCATCT 57.232 40.909 0.19 0.00 35.77 2.90
3020 3467 4.445718 CGTACATTCAGTGTCCTATGCATC 59.554 45.833 0.19 0.00 42.29 3.91
3021 3468 4.141937 ACGTACATTCAGTGTCCTATGCAT 60.142 41.667 3.79 3.79 42.29 3.96
3022 3469 3.194755 ACGTACATTCAGTGTCCTATGCA 59.805 43.478 0.00 0.00 42.29 3.96
3023 3470 3.782046 ACGTACATTCAGTGTCCTATGC 58.218 45.455 0.00 0.00 42.29 3.14
3024 3471 5.742453 GTGTACGTACATTCAGTGTCCTATG 59.258 44.000 29.58 0.00 42.29 2.23
3025 3472 5.416639 TGTGTACGTACATTCAGTGTCCTAT 59.583 40.000 29.58 0.00 42.29 2.57
3026 3473 4.761227 TGTGTACGTACATTCAGTGTCCTA 59.239 41.667 29.58 0.49 42.29 2.94
3027 3474 3.570975 TGTGTACGTACATTCAGTGTCCT 59.429 43.478 29.58 0.00 42.29 3.85
3028 3475 3.904571 TGTGTACGTACATTCAGTGTCC 58.095 45.455 29.58 14.61 42.29 4.02
3029 3476 5.667888 GCAATGTGTACGTACATTCAGTGTC 60.668 44.000 30.39 23.39 45.49 3.67
3030 3477 4.151689 GCAATGTGTACGTACATTCAGTGT 59.848 41.667 30.39 15.81 45.49 3.55
3031 3478 4.637968 GCAATGTGTACGTACATTCAGTG 58.362 43.478 28.22 28.22 45.49 3.66
3032 3479 3.366724 CGCAATGTGTACGTACATTCAGT 59.633 43.478 29.58 20.06 45.49 3.41
3033 3480 3.780957 GCGCAATGTGTACGTACATTCAG 60.781 47.826 29.58 20.25 45.49 3.02
3034 3481 2.092995 GCGCAATGTGTACGTACATTCA 59.907 45.455 29.58 23.31 45.49 2.57
3035 3482 2.347452 AGCGCAATGTGTACGTACATTC 59.653 45.455 29.58 18.69 45.49 2.67
3037 3484 1.658596 CAGCGCAATGTGTACGTACAT 59.341 47.619 29.58 14.65 42.82 2.29
3038 3485 1.064582 CAGCGCAATGTGTACGTACA 58.935 50.000 24.10 24.10 34.63 2.90
3039 3486 1.342555 TCAGCGCAATGTGTACGTAC 58.657 50.000 18.90 18.90 0.00 3.67
3040 3487 2.067414 TTCAGCGCAATGTGTACGTA 57.933 45.000 11.47 0.00 0.00 3.57
3041 3488 1.438651 ATTCAGCGCAATGTGTACGT 58.561 45.000 11.47 0.00 0.00 3.57
3042 3489 2.525750 AATTCAGCGCAATGTGTACG 57.474 45.000 11.47 0.00 0.00 3.67
3043 3490 3.788797 GCCTAATTCAGCGCAATGTGTAC 60.789 47.826 11.47 0.00 0.00 2.90
3044 3491 2.354510 GCCTAATTCAGCGCAATGTGTA 59.645 45.455 11.47 0.00 0.00 2.90
3045 3492 1.133025 GCCTAATTCAGCGCAATGTGT 59.867 47.619 11.47 0.00 0.00 3.72
3046 3493 1.132834 TGCCTAATTCAGCGCAATGTG 59.867 47.619 11.47 0.00 30.46 3.21
3047 3494 1.402968 CTGCCTAATTCAGCGCAATGT 59.597 47.619 11.47 0.00 32.33 2.71
3048 3495 1.268896 CCTGCCTAATTCAGCGCAATG 60.269 52.381 11.47 0.00 32.33 2.82
3049 3496 1.027357 CCTGCCTAATTCAGCGCAAT 58.973 50.000 11.47 0.00 32.33 3.56
3050 3497 0.322456 ACCTGCCTAATTCAGCGCAA 60.322 50.000 11.47 0.00 32.33 4.85
3051 3498 1.026182 CACCTGCCTAATTCAGCGCA 61.026 55.000 11.47 0.00 0.00 6.09
3052 3499 1.718757 CCACCTGCCTAATTCAGCGC 61.719 60.000 0.00 0.00 0.00 5.92
3053 3500 1.097547 CCCACCTGCCTAATTCAGCG 61.098 60.000 0.00 0.00 0.00 5.18
3054 3501 1.387295 GCCCACCTGCCTAATTCAGC 61.387 60.000 0.00 0.00 0.00 4.26
3055 3502 0.257039 AGCCCACCTGCCTAATTCAG 59.743 55.000 0.00 0.00 0.00 3.02
3056 3503 0.034186 CAGCCCACCTGCCTAATTCA 60.034 55.000 0.00 0.00 34.21 2.57
3057 3504 2.799176 CAGCCCACCTGCCTAATTC 58.201 57.895 0.00 0.00 34.21 2.17
3065 3512 2.439701 CCATCAGCAGCCCACCTG 60.440 66.667 0.00 0.00 44.67 4.00
3066 3513 4.437587 GCCATCAGCAGCCCACCT 62.438 66.667 0.00 0.00 42.97 4.00
3075 3522 3.944015 ACAAGAAATGAGTAGCCATCAGC 59.056 43.478 0.00 0.00 44.25 4.26
3076 3523 7.041508 GGATTACAAGAAATGAGTAGCCATCAG 60.042 40.741 0.00 0.00 0.00 2.90
3077 3524 6.767902 GGATTACAAGAAATGAGTAGCCATCA 59.232 38.462 0.00 0.00 0.00 3.07
3078 3525 6.767902 TGGATTACAAGAAATGAGTAGCCATC 59.232 38.462 0.00 0.00 0.00 3.51
3079 3526 6.662755 TGGATTACAAGAAATGAGTAGCCAT 58.337 36.000 0.00 0.00 0.00 4.40
3080 3527 6.061022 TGGATTACAAGAAATGAGTAGCCA 57.939 37.500 0.00 0.00 0.00 4.75
3081 3528 6.514048 GCATGGATTACAAGAAATGAGTAGCC 60.514 42.308 0.00 0.00 0.00 3.93
3082 3529 6.261826 AGCATGGATTACAAGAAATGAGTAGC 59.738 38.462 0.00 0.00 0.00 3.58
3083 3530 7.281774 ACAGCATGGATTACAAGAAATGAGTAG 59.718 37.037 0.00 0.00 43.62 2.57
3084 3531 7.112122 ACAGCATGGATTACAAGAAATGAGTA 58.888 34.615 0.00 0.00 43.62 2.59
3085 3532 5.948162 ACAGCATGGATTACAAGAAATGAGT 59.052 36.000 0.00 0.00 43.62 3.41
3086 3533 6.446781 ACAGCATGGATTACAAGAAATGAG 57.553 37.500 0.00 0.00 43.62 2.90
3087 3534 6.839124 AACAGCATGGATTACAAGAAATGA 57.161 33.333 0.00 0.00 43.62 2.57
3088 3535 6.869913 ACAAACAGCATGGATTACAAGAAATG 59.130 34.615 0.00 0.00 43.62 2.32
3089 3536 6.869913 CACAAACAGCATGGATTACAAGAAAT 59.130 34.615 0.00 0.00 43.62 2.17
3090 3537 6.215121 CACAAACAGCATGGATTACAAGAAA 58.785 36.000 0.00 0.00 43.62 2.52
3091 3538 5.771469 CACAAACAGCATGGATTACAAGAA 58.229 37.500 0.00 0.00 43.62 2.52
3092 3539 4.321156 GCACAAACAGCATGGATTACAAGA 60.321 41.667 0.00 0.00 43.62 3.02
3093 3540 3.922240 GCACAAACAGCATGGATTACAAG 59.078 43.478 0.00 0.00 43.62 3.16
3094 3541 3.573538 AGCACAAACAGCATGGATTACAA 59.426 39.130 0.00 0.00 43.62 2.41
3095 3542 3.156293 AGCACAAACAGCATGGATTACA 58.844 40.909 0.00 0.00 43.62 2.41
3096 3543 3.855689 AGCACAAACAGCATGGATTAC 57.144 42.857 0.00 0.00 43.62 1.89
3097 3544 5.973899 TTTAGCACAAACAGCATGGATTA 57.026 34.783 0.00 0.00 43.62 1.75
3098 3545 4.870123 TTTAGCACAAACAGCATGGATT 57.130 36.364 0.00 0.00 43.62 3.01
3099 3546 4.559153 GTTTTAGCACAAACAGCATGGAT 58.441 39.130 6.01 0.00 43.62 3.41
3100 3547 3.549827 CGTTTTAGCACAAACAGCATGGA 60.550 43.478 10.39 0.00 43.62 3.41
3101 3548 2.725723 CGTTTTAGCACAAACAGCATGG 59.274 45.455 10.39 0.00 43.62 3.66
3102 3549 2.153627 GCGTTTTAGCACAAACAGCATG 59.846 45.455 15.72 0.00 36.58 4.06
3103 3550 2.393764 GCGTTTTAGCACAAACAGCAT 58.606 42.857 15.72 0.00 36.58 3.79
3104 3551 1.535015 GGCGTTTTAGCACAAACAGCA 60.535 47.619 19.14 0.00 37.64 4.41
3105 3552 1.128513 GGCGTTTTAGCACAAACAGC 58.871 50.000 10.39 12.35 36.58 4.40
3106 3553 1.766069 GGGCGTTTTAGCACAAACAG 58.234 50.000 10.39 5.41 40.96 3.16
3107 3554 3.949031 GGGCGTTTTAGCACAAACA 57.051 47.368 10.39 0.00 40.96 2.83
3112 3559 1.284715 GGTGTGGGCGTTTTAGCAC 59.715 57.895 0.00 0.00 41.82 4.40
3113 3560 1.899534 GGGTGTGGGCGTTTTAGCA 60.900 57.895 0.00 0.00 39.27 3.49
3114 3561 1.862602 CTGGGTGTGGGCGTTTTAGC 61.863 60.000 0.00 0.00 0.00 3.09
3115 3562 0.250553 TCTGGGTGTGGGCGTTTTAG 60.251 55.000 0.00 0.00 0.00 1.85
3116 3563 0.535553 GTCTGGGTGTGGGCGTTTTA 60.536 55.000 0.00 0.00 0.00 1.52
3117 3564 1.826487 GTCTGGGTGTGGGCGTTTT 60.826 57.895 0.00 0.00 0.00 2.43
3118 3565 2.203294 GTCTGGGTGTGGGCGTTT 60.203 61.111 0.00 0.00 0.00 3.60
3119 3566 3.476031 CTGTCTGGGTGTGGGCGTT 62.476 63.158 0.00 0.00 0.00 4.84
3120 3567 3.941188 CTGTCTGGGTGTGGGCGT 61.941 66.667 0.00 0.00 0.00 5.68
3121 3568 3.596066 CTCTGTCTGGGTGTGGGCG 62.596 68.421 0.00 0.00 0.00 6.13
3122 3569 1.192146 TACTCTGTCTGGGTGTGGGC 61.192 60.000 0.00 0.00 0.00 5.36
3123 3570 1.002087 GTTACTCTGTCTGGGTGTGGG 59.998 57.143 0.00 0.00 0.00 4.61
3124 3571 1.691976 TGTTACTCTGTCTGGGTGTGG 59.308 52.381 0.00 0.00 0.00 4.17
3125 3572 2.548067 GGTGTTACTCTGTCTGGGTGTG 60.548 54.545 0.00 0.00 0.00 3.82
3126 3573 1.692519 GGTGTTACTCTGTCTGGGTGT 59.307 52.381 0.00 0.00 0.00 4.16
3127 3574 1.691976 TGGTGTTACTCTGTCTGGGTG 59.308 52.381 0.00 0.00 0.00 4.61
3128 3575 1.692519 GTGGTGTTACTCTGTCTGGGT 59.307 52.381 0.00 0.00 0.00 4.51
3129 3576 1.691976 TGTGGTGTTACTCTGTCTGGG 59.308 52.381 0.00 0.00 0.00 4.45
3130 3577 2.102420 TGTGTGGTGTTACTCTGTCTGG 59.898 50.000 0.00 0.00 0.00 3.86
3131 3578 3.452755 TGTGTGGTGTTACTCTGTCTG 57.547 47.619 0.00 0.00 0.00 3.51
3132 3579 3.641436 TGATGTGTGGTGTTACTCTGTCT 59.359 43.478 0.00 0.00 0.00 3.41
3133 3580 3.990092 TGATGTGTGGTGTTACTCTGTC 58.010 45.455 0.00 0.00 0.00 3.51
3134 3581 4.202357 ACATGATGTGTGGTGTTACTCTGT 60.202 41.667 0.00 0.00 40.28 3.41
3135 3582 4.318332 ACATGATGTGTGGTGTTACTCTG 58.682 43.478 0.00 0.00 40.28 3.35
3136 3583 4.623932 ACATGATGTGTGGTGTTACTCT 57.376 40.909 0.00 0.00 40.28 3.24
3137 3584 4.083324 CCAACATGATGTGTGGTGTTACTC 60.083 45.833 14.57 0.00 41.14 2.59
3138 3585 3.820467 CCAACATGATGTGTGGTGTTACT 59.180 43.478 14.57 0.00 41.14 2.24
3139 3586 3.568007 ACCAACATGATGTGTGGTGTTAC 59.432 43.478 22.60 0.00 41.14 2.50
3140 3587 3.818210 GACCAACATGATGTGTGGTGTTA 59.182 43.478 25.97 0.00 41.14 2.41
3141 3588 2.622942 GACCAACATGATGTGTGGTGTT 59.377 45.455 25.97 10.67 41.14 3.32
3142 3589 2.158623 AGACCAACATGATGTGTGGTGT 60.159 45.455 25.97 21.67 41.14 4.16
3143 3590 2.227149 CAGACCAACATGATGTGTGGTG 59.773 50.000 25.97 15.03 41.14 4.17
3144 3591 2.158623 ACAGACCAACATGATGTGTGGT 60.159 45.455 23.10 23.10 41.14 4.16
3145 3592 2.507484 ACAGACCAACATGATGTGTGG 58.493 47.619 18.69 18.69 41.14 4.17
3146 3593 3.436704 GGTACAGACCAACATGATGTGTG 59.563 47.826 0.00 4.74 46.12 3.82
3147 3594 3.674997 GGTACAGACCAACATGATGTGT 58.325 45.455 0.00 1.09 46.12 3.72
3160 3607 3.056749 AGTCGACAAATGGAGGTACAGAC 60.057 47.826 19.50 0.00 0.00 3.51
3161 3608 3.056821 CAGTCGACAAATGGAGGTACAGA 60.057 47.826 19.50 0.00 0.00 3.41
3162 3609 3.254060 CAGTCGACAAATGGAGGTACAG 58.746 50.000 19.50 0.00 0.00 2.74
3163 3610 2.611971 GCAGTCGACAAATGGAGGTACA 60.612 50.000 19.50 0.00 0.00 2.90
3164 3611 2.000447 GCAGTCGACAAATGGAGGTAC 59.000 52.381 19.50 0.00 0.00 3.34
3165 3612 1.899814 AGCAGTCGACAAATGGAGGTA 59.100 47.619 19.50 0.00 0.00 3.08
3166 3613 0.687354 AGCAGTCGACAAATGGAGGT 59.313 50.000 19.50 1.11 0.00 3.85
3167 3614 2.271800 GTAGCAGTCGACAAATGGAGG 58.728 52.381 19.50 0.00 0.00 4.30
3168 3615 1.920574 CGTAGCAGTCGACAAATGGAG 59.079 52.381 19.50 0.00 0.00 3.86
3169 3616 1.542472 TCGTAGCAGTCGACAAATGGA 59.458 47.619 19.50 4.78 32.30 3.41
3170 3617 1.920574 CTCGTAGCAGTCGACAAATGG 59.079 52.381 19.50 2.28 33.71 3.16
3171 3618 1.321743 GCTCGTAGCAGTCGACAAATG 59.678 52.381 19.50 8.69 41.89 2.32
3172 3619 1.630148 GCTCGTAGCAGTCGACAAAT 58.370 50.000 19.50 4.97 41.89 2.32
3173 3620 3.102515 GCTCGTAGCAGTCGACAAA 57.897 52.632 19.50 0.00 41.89 2.83
3174 3621 4.861883 GCTCGTAGCAGTCGACAA 57.138 55.556 19.50 0.00 41.89 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.