Multiple sequence alignment - TraesCS6D01G377900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G377900 chr6D 100.000 6764 0 0 1 6764 460566642 460573405 0.000000e+00 12491.0
1 TraesCS6D01G377900 chr6D 82.883 2220 268 67 1912 4092 462318099 462320245 0.000000e+00 1892.0
2 TraesCS6D01G377900 chr6D 81.171 871 114 32 4933 5765 462321226 462322084 0.000000e+00 654.0
3 TraesCS6D01G377900 chr6D 76.607 731 101 46 1106 1792 462317239 462317943 8.400000e-89 339.0
4 TraesCS6D01G377900 chr6D 74.783 345 60 25 304 634 470969996 470970327 5.510000e-26 130.0
5 TraesCS6D01G377900 chr6D 92.453 53 3 1 6713 6764 368780397 368780345 2.620000e-09 75.0
6 TraesCS6D01G377900 chr6D 93.182 44 2 1 1847 1890 460568456 460568498 5.660000e-06 63.9
7 TraesCS6D01G377900 chr6D 93.182 44 2 1 1815 1857 460568488 460568531 5.660000e-06 63.9
8 TraesCS6D01G377900 chr6A 95.420 4869 152 33 1847 6706 606762257 606767063 0.000000e+00 7690.0
9 TraesCS6D01G377900 chr6A 82.719 2170 285 51 1912 4063 609138664 609140761 0.000000e+00 1847.0
10 TraesCS6D01G377900 chr6A 94.219 1159 46 12 707 1856 606761152 606762298 0.000000e+00 1749.0
11 TraesCS6D01G377900 chr6A 77.530 761 93 50 1086 1792 609137476 609138212 2.960000e-103 387.0
12 TraesCS6D01G377900 chr6A 78.632 585 93 19 4953 5512 609141594 609142171 6.450000e-95 359.0
13 TraesCS6D01G377900 chr6A 82.667 75 11 1 3 75 12430396 12430322 1.570000e-06 65.8
14 TraesCS6D01G377900 chr6B 96.079 2015 66 12 4755 6764 701659303 701661309 0.000000e+00 3271.0
15 TraesCS6D01G377900 chr6B 91.711 2268 126 34 1847 4100 701656000 701658219 0.000000e+00 3090.0
16 TraesCS6D01G377900 chr6B 92.094 1189 56 20 691 1850 701654856 701656035 0.000000e+00 1640.0
17 TraesCS6D01G377900 chr6B 81.469 2083 272 72 2053 4092 704789688 704791699 0.000000e+00 1604.0
18 TraesCS6D01G377900 chr6B 80.390 872 122 33 4933 5765 704792672 704793533 9.640000e-173 617.0
19 TraesCS6D01G377900 chr6B 94.708 359 17 2 4194 4551 701658759 701659116 2.130000e-154 556.0
20 TraesCS6D01G377900 chr6B 83.461 393 34 23 1413 1792 704788947 704789321 3.020000e-88 337.0
21 TraesCS6D01G377900 chr6B 93.923 181 10 1 4523 4702 701659119 701659299 8.640000e-69 272.0
22 TraesCS6D01G377900 chr6B 87.861 173 13 5 1886 2053 704789465 704789634 5.350000e-46 196.0
23 TraesCS6D01G377900 chr6B 92.593 54 2 2 6713 6764 123502278 123502331 7.270000e-10 76.8
24 TraesCS6D01G377900 chr3D 89.394 330 30 5 309 635 410546473 410546146 1.760000e-110 411.0
25 TraesCS6D01G377900 chr3D 93.506 77 5 0 4102 4178 365521019 365520943 1.540000e-21 115.0
26 TraesCS6D01G377900 chr3B 90.987 233 19 2 405 635 202916689 202916921 5.090000e-81 313.0
27 TraesCS6D01G377900 chr3B 81.944 144 20 6 1484 1625 755474808 755474669 4.290000e-22 117.0
28 TraesCS6D01G377900 chr3B 92.105 76 5 1 146 220 46762791 46762866 9.280000e-19 106.0
29 TraesCS6D01G377900 chr3B 88.462 78 8 1 145 221 21384042 21383965 7.220000e-15 93.5
30 TraesCS6D01G377900 chr3A 78.308 461 54 23 1693 2145 700820091 700819669 8.710000e-64 255.0
31 TraesCS6D01G377900 chr3A 88.158 152 17 1 1482 1632 700820343 700820192 5.390000e-41 180.0
32 TraesCS6D01G377900 chr3A 90.476 63 3 2 6705 6764 746904769 746904707 5.620000e-11 80.5
33 TraesCS6D01G377900 chr3A 89.655 58 4 2 6709 6764 651513175 651513232 9.410000e-09 73.1
34 TraesCS6D01G377900 chr3A 85.135 74 7 3 1 73 691704277 691704347 9.410000e-09 73.1
35 TraesCS6D01G377900 chr3A 93.478 46 1 1 1 46 173888798 173888755 4.380000e-07 67.6
36 TraesCS6D01G377900 chrUn 79.646 339 42 22 309 635 30102597 30102920 1.140000e-52 219.0
37 TraesCS6D01G377900 chrUn 80.000 255 30 16 389 634 316821737 316821979 1.170000e-37 169.0
38 TraesCS6D01G377900 chrUn 80.000 255 30 16 389 634 382594877 382594635 1.170000e-37 169.0
39 TraesCS6D01G377900 chrUn 95.775 71 3 0 4100 4170 86734338 86734268 1.540000e-21 115.0
40 TraesCS6D01G377900 chr1D 78.593 327 46 9 333 635 86431343 86431017 1.920000e-45 195.0
41 TraesCS6D01G377900 chr1D 96.226 53 1 1 6713 6764 81529 81477 1.210000e-12 86.1
42 TraesCS6D01G377900 chr1D 81.081 74 12 2 1 73 469818375 469818447 2.630000e-04 58.4
43 TraesCS6D01G377900 chr1B 80.000 255 30 16 389 634 560334782 560335024 1.170000e-37 169.0
44 TraesCS6D01G377900 chr5A 74.398 332 67 13 309 635 378724475 378724793 7.120000e-25 126.0
45 TraesCS6D01G377900 chr4A 94.872 78 4 0 4101 4178 614112478 614112401 9.210000e-24 122.0
46 TraesCS6D01G377900 chr2B 92.941 85 3 2 4102 4183 690788083 690787999 3.310000e-23 121.0
47 TraesCS6D01G377900 chr2B 92.500 80 6 0 4099 4178 722081372 722081451 1.540000e-21 115.0
48 TraesCS6D01G377900 chr2B 91.566 83 6 1 4097 4178 608226719 608226801 5.540000e-21 113.0
49 TraesCS6D01G377900 chr2B 94.340 53 2 1 6713 6764 225436404 225436352 5.620000e-11 80.5
50 TraesCS6D01G377900 chr5D 93.506 77 5 0 4102 4178 240087706 240087630 1.540000e-21 115.0
51 TraesCS6D01G377900 chr1A 89.773 88 6 2 4091 4178 283855509 283855593 7.170000e-20 110.0
52 TraesCS6D01G377900 chr1A 90.000 60 5 1 147 205 516614670 516614611 7.270000e-10 76.8
53 TraesCS6D01G377900 chr1A 83.544 79 10 3 3 79 33857246 33857323 3.380000e-08 71.3
54 TraesCS6D01G377900 chr2D 94.231 52 2 1 6713 6763 80729808 80729757 2.020000e-10 78.7
55 TraesCS6D01G377900 chr2D 89.796 49 1 3 2 46 423376685 423376637 7.330000e-05 60.2
56 TraesCS6D01G377900 chr4D 88.889 63 5 2 6701 6762 101653202 101653263 7.270000e-10 76.8
57 TraesCS6D01G377900 chr2A 83.099 71 12 0 3 73 632429987 632429917 1.570000e-06 65.8
58 TraesCS6D01G377900 chr2A 89.796 49 1 3 2 46 686293492 686293444 7.330000e-05 60.2
59 TraesCS6D01G377900 chr7D 89.796 49 1 3 2 46 561698173 561698221 7.330000e-05 60.2
60 TraesCS6D01G377900 chr7D 94.118 34 2 0 380 413 98632703 98632670 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G377900 chr6D 460566642 460573405 6763 False 12491.000000 12491 100.000000 1 6764 1 chr6D.!!$F1 6763
1 TraesCS6D01G377900 chr6D 462317239 462322084 4845 False 961.666667 1892 80.220333 1106 5765 3 chr6D.!!$F4 4659
2 TraesCS6D01G377900 chr6A 606761152 606767063 5911 False 4719.500000 7690 94.819500 707 6706 2 chr6A.!!$F1 5999
3 TraesCS6D01G377900 chr6A 609137476 609142171 4695 False 864.333333 1847 79.627000 1086 5512 3 chr6A.!!$F2 4426
4 TraesCS6D01G377900 chr6B 701654856 701661309 6453 False 1765.800000 3271 93.703000 691 6764 5 chr6B.!!$F2 6073
5 TraesCS6D01G377900 chr6B 704788947 704793533 4586 False 688.500000 1604 83.295250 1413 5765 4 chr6B.!!$F3 4352
6 TraesCS6D01G377900 chr3A 700819669 700820343 674 True 217.500000 255 83.233000 1482 2145 2 chr3A.!!$R3 663

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
421 422 0.034574 AGCAAGAACACCACACCACA 60.035 50.000 0.00 0.0 0.00 4.17 F
448 449 0.036952 AAGTCCACTGACAGCCATCG 60.037 55.000 1.25 0.0 44.33 3.84 F
605 606 0.116342 TAGAGGAGGTGGCAAGTGGA 59.884 55.000 0.00 0.0 0.00 4.02 F
607 608 0.393537 GAGGAGGTGGCAAGTGGATG 60.394 60.000 0.00 0.0 0.00 3.51 F
616 617 0.610232 GCAAGTGGATGGCAGGACTT 60.610 55.000 0.00 0.0 0.00 3.01 F
677 678 0.689623 AAGGAAGCCTCTCCTGTGTG 59.310 55.000 0.56 0.0 45.59 3.82 F
2186 2786 0.320374 TCGGAAATGCTTCAGACCGT 59.680 50.000 0.00 0.0 40.93 4.83 F
3442 4068 1.063616 GTTTTAATTCGCCGCTCCCTC 59.936 52.381 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1289 1338 0.257616 TAAGGGATTTGCCGGGGAAG 59.742 55.000 2.18 0.0 37.63 3.46 R
1922 2456 1.077716 GATACCCTGCACCCACCAC 60.078 63.158 0.00 0.0 0.00 4.16 R
1953 2489 1.327303 GTGCCCATCACAAACTCCAA 58.673 50.000 0.00 0.0 44.98 3.53 R
2051 2648 2.760634 TTGATTGCGAGTAGGAAGCA 57.239 45.000 0.00 0.0 44.61 3.91 R
2072 2672 6.872920 AGAAAGGAAGCAATACACACAAAAA 58.127 32.000 0.00 0.0 0.00 1.94 R
3442 4068 2.692557 CTCCCCTAGCATATCATCCTCG 59.307 54.545 0.00 0.0 0.00 4.63 R
3966 4606 2.097304 TGGATTGAAAACATCCGCATCG 59.903 45.455 0.00 0.0 43.04 3.84 R
6051 7577 1.270839 GCCTTAGCCACTCAACAGACA 60.271 52.381 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.500558 TGTGTTGTGTTGTCATGTTGG 57.499 42.857 0.00 0.00 0.00 3.77
22 23 2.822561 TGTGTTGTGTTGTCATGTTGGT 59.177 40.909 0.00 0.00 0.00 3.67
23 24 3.256879 TGTGTTGTGTTGTCATGTTGGTT 59.743 39.130 0.00 0.00 0.00 3.67
25 26 3.256879 TGTTGTGTTGTCATGTTGGTTGT 59.743 39.130 0.00 0.00 0.00 3.32
26 27 4.459337 TGTTGTGTTGTCATGTTGGTTGTA 59.541 37.500 0.00 0.00 0.00 2.41
27 28 5.048013 TGTTGTGTTGTCATGTTGGTTGTAA 60.048 36.000 0.00 0.00 0.00 2.41
28 29 5.242069 TGTGTTGTCATGTTGGTTGTAAG 57.758 39.130 0.00 0.00 0.00 2.34
29 30 4.097135 TGTGTTGTCATGTTGGTTGTAAGG 59.903 41.667 0.00 0.00 0.00 2.69
30 31 3.634448 TGTTGTCATGTTGGTTGTAAGGG 59.366 43.478 0.00 0.00 0.00 3.95
31 32 2.235016 TGTCATGTTGGTTGTAAGGGC 58.765 47.619 0.00 0.00 0.00 5.19
32 33 2.158534 TGTCATGTTGGTTGTAAGGGCT 60.159 45.455 0.00 0.00 0.00 5.19
33 34 2.890945 GTCATGTTGGTTGTAAGGGCTT 59.109 45.455 0.00 0.00 0.00 4.35
34 35 3.057526 GTCATGTTGGTTGTAAGGGCTTC 60.058 47.826 0.00 0.00 0.00 3.86
35 36 2.738587 TGTTGGTTGTAAGGGCTTCA 57.261 45.000 0.00 0.00 0.00 3.02
36 37 3.237268 TGTTGGTTGTAAGGGCTTCAT 57.763 42.857 0.00 0.00 0.00 2.57
37 38 3.571590 TGTTGGTTGTAAGGGCTTCATT 58.428 40.909 0.00 0.00 0.00 2.57
38 39 4.730966 TGTTGGTTGTAAGGGCTTCATTA 58.269 39.130 0.00 0.00 0.00 1.90
39 40 5.141182 TGTTGGTTGTAAGGGCTTCATTAA 58.859 37.500 0.00 0.00 0.00 1.40
40 41 5.777732 TGTTGGTTGTAAGGGCTTCATTAAT 59.222 36.000 0.00 0.00 0.00 1.40
41 42 6.268847 TGTTGGTTGTAAGGGCTTCATTAATT 59.731 34.615 0.00 0.00 0.00 1.40
42 43 6.926630 TGGTTGTAAGGGCTTCATTAATTT 57.073 33.333 0.00 0.00 0.00 1.82
43 44 8.308207 GTTGGTTGTAAGGGCTTCATTAATTTA 58.692 33.333 0.00 0.00 0.00 1.40
44 45 8.423906 TGGTTGTAAGGGCTTCATTAATTTAA 57.576 30.769 0.00 0.00 0.00 1.52
45 46 8.871125 TGGTTGTAAGGGCTTCATTAATTTAAA 58.129 29.630 0.00 0.00 0.00 1.52
46 47 9.713713 GGTTGTAAGGGCTTCATTAATTTAAAA 57.286 29.630 0.00 0.00 0.00 1.52
52 53 9.875691 AAGGGCTTCATTAATTTAAAATCAGAC 57.124 29.630 0.00 0.00 0.00 3.51
53 54 9.034800 AGGGCTTCATTAATTTAAAATCAGACA 57.965 29.630 0.00 0.00 0.00 3.41
54 55 9.087424 GGGCTTCATTAATTTAAAATCAGACAC 57.913 33.333 0.00 0.00 0.00 3.67
55 56 9.638239 GGCTTCATTAATTTAAAATCAGACACA 57.362 29.630 0.00 0.00 0.00 3.72
66 67 9.528018 TTTAAAATCAGACACAAACCTCATTTC 57.472 29.630 0.00 0.00 0.00 2.17
67 68 6.966534 AAATCAGACACAAACCTCATTTCT 57.033 33.333 0.00 0.00 0.00 2.52
68 69 8.463930 AAAATCAGACACAAACCTCATTTCTA 57.536 30.769 0.00 0.00 0.00 2.10
69 70 8.463930 AAATCAGACACAAACCTCATTTCTAA 57.536 30.769 0.00 0.00 0.00 2.10
70 71 8.463930 AATCAGACACAAACCTCATTTCTAAA 57.536 30.769 0.00 0.00 0.00 1.85
71 72 7.873719 TCAGACACAAACCTCATTTCTAAAA 57.126 32.000 0.00 0.00 0.00 1.52
72 73 8.287439 TCAGACACAAACCTCATTTCTAAAAA 57.713 30.769 0.00 0.00 0.00 1.94
93 94 6.399639 AAAAAGTTCCGGATGTAACACATT 57.600 33.333 4.15 0.00 39.27 2.71
94 95 6.399639 AAAAGTTCCGGATGTAACACATTT 57.600 33.333 4.15 1.69 39.27 2.32
95 96 6.399639 AAAGTTCCGGATGTAACACATTTT 57.600 33.333 4.15 0.00 39.27 1.82
96 97 6.399639 AAGTTCCGGATGTAACACATTTTT 57.600 33.333 4.15 0.00 39.27 1.94
97 98 5.768317 AGTTCCGGATGTAACACATTTTTG 58.232 37.500 4.15 0.00 39.27 2.44
98 99 5.533154 AGTTCCGGATGTAACACATTTTTGA 59.467 36.000 4.15 0.00 39.27 2.69
99 100 6.039941 AGTTCCGGATGTAACACATTTTTGAA 59.960 34.615 4.15 0.00 39.27 2.69
100 101 6.582677 TCCGGATGTAACACATTTTTGAAT 57.417 33.333 0.00 0.00 39.27 2.57
101 102 6.616947 TCCGGATGTAACACATTTTTGAATC 58.383 36.000 0.00 0.00 39.27 2.52
102 103 6.432783 TCCGGATGTAACACATTTTTGAATCT 59.567 34.615 0.00 0.00 39.27 2.40
103 104 7.040062 TCCGGATGTAACACATTTTTGAATCTT 60.040 33.333 0.00 0.00 39.27 2.40
104 105 7.273381 CCGGATGTAACACATTTTTGAATCTTC 59.727 37.037 0.00 0.00 39.27 2.87
105 106 7.807433 CGGATGTAACACATTTTTGAATCTTCA 59.193 33.333 0.00 0.00 39.27 3.02
106 107 9.132521 GGATGTAACACATTTTTGAATCTTCAG 57.867 33.333 0.00 0.00 39.27 3.02
107 108 9.132521 GATGTAACACATTTTTGAATCTTCAGG 57.867 33.333 0.00 0.00 39.27 3.86
108 109 8.231692 TGTAACACATTTTTGAATCTTCAGGA 57.768 30.769 0.00 0.00 38.61 3.86
109 110 8.859090 TGTAACACATTTTTGAATCTTCAGGAT 58.141 29.630 0.00 0.00 38.61 3.24
112 113 8.059798 ACACATTTTTGAATCTTCAGGATAGG 57.940 34.615 0.00 0.00 38.61 2.57
113 114 7.890127 ACACATTTTTGAATCTTCAGGATAGGA 59.110 33.333 0.00 0.00 38.61 2.94
114 115 8.404000 CACATTTTTGAATCTTCAGGATAGGAG 58.596 37.037 0.00 0.00 38.61 3.69
115 116 7.559170 ACATTTTTGAATCTTCAGGATAGGAGG 59.441 37.037 0.00 0.00 38.61 4.30
116 117 5.636903 TTTGAATCTTCAGGATAGGAGGG 57.363 43.478 0.00 0.00 38.61 4.30
117 118 4.559576 TGAATCTTCAGGATAGGAGGGA 57.440 45.455 0.00 0.00 33.71 4.20
118 119 4.487804 TGAATCTTCAGGATAGGAGGGAG 58.512 47.826 0.00 0.00 33.71 4.30
119 120 4.078336 TGAATCTTCAGGATAGGAGGGAGT 60.078 45.833 0.00 0.00 33.71 3.85
120 121 5.136220 TGAATCTTCAGGATAGGAGGGAGTA 59.864 44.000 0.00 0.00 33.71 2.59
121 122 5.894715 ATCTTCAGGATAGGAGGGAGTAT 57.105 43.478 0.00 0.00 32.04 2.12
122 123 5.688220 TCTTCAGGATAGGAGGGAGTATT 57.312 43.478 0.00 0.00 0.00 1.89
123 124 6.798544 TCTTCAGGATAGGAGGGAGTATTA 57.201 41.667 0.00 0.00 0.00 0.98
124 125 7.363759 TCTTCAGGATAGGAGGGAGTATTAT 57.636 40.000 0.00 0.00 0.00 1.28
125 126 7.185565 TCTTCAGGATAGGAGGGAGTATTATG 58.814 42.308 0.00 0.00 0.00 1.90
126 127 6.485388 TCAGGATAGGAGGGAGTATTATGT 57.515 41.667 0.00 0.00 0.00 2.29
127 128 6.875469 TCAGGATAGGAGGGAGTATTATGTT 58.125 40.000 0.00 0.00 0.00 2.71
128 129 7.313731 TCAGGATAGGAGGGAGTATTATGTTT 58.686 38.462 0.00 0.00 0.00 2.83
129 130 7.235606 TCAGGATAGGAGGGAGTATTATGTTTG 59.764 40.741 0.00 0.00 0.00 2.93
130 131 7.235606 CAGGATAGGAGGGAGTATTATGTTTGA 59.764 40.741 0.00 0.00 0.00 2.69
131 132 7.456269 AGGATAGGAGGGAGTATTATGTTTGAG 59.544 40.741 0.00 0.00 0.00 3.02
132 133 5.896073 AGGAGGGAGTATTATGTTTGAGG 57.104 43.478 0.00 0.00 0.00 3.86
133 134 5.289510 AGGAGGGAGTATTATGTTTGAGGT 58.710 41.667 0.00 0.00 0.00 3.85
134 135 5.131142 AGGAGGGAGTATTATGTTTGAGGTG 59.869 44.000 0.00 0.00 0.00 4.00
135 136 5.130477 GGAGGGAGTATTATGTTTGAGGTGA 59.870 44.000 0.00 0.00 0.00 4.02
136 137 6.183361 GGAGGGAGTATTATGTTTGAGGTGAT 60.183 42.308 0.00 0.00 0.00 3.06
137 138 7.213178 AGGGAGTATTATGTTTGAGGTGATT 57.787 36.000 0.00 0.00 0.00 2.57
138 139 7.643123 AGGGAGTATTATGTTTGAGGTGATTT 58.357 34.615 0.00 0.00 0.00 2.17
139 140 8.116026 AGGGAGTATTATGTTTGAGGTGATTTT 58.884 33.333 0.00 0.00 0.00 1.82
140 141 8.190784 GGGAGTATTATGTTTGAGGTGATTTTG 58.809 37.037 0.00 0.00 0.00 2.44
141 142 8.739972 GGAGTATTATGTTTGAGGTGATTTTGT 58.260 33.333 0.00 0.00 0.00 2.83
168 169 5.828299 TTTTTGCGGGAAAATATCGATCT 57.172 34.783 8.25 0.00 33.46 2.75
169 170 6.928979 TTTTTGCGGGAAAATATCGATCTA 57.071 33.333 8.25 0.00 33.46 1.98
170 171 7.504924 TTTTTGCGGGAAAATATCGATCTAT 57.495 32.000 8.25 0.00 33.46 1.98
171 172 7.504924 TTTTGCGGGAAAATATCGATCTATT 57.495 32.000 0.00 0.00 0.00 1.73
172 173 6.721571 TTGCGGGAAAATATCGATCTATTC 57.278 37.500 0.00 4.85 0.00 1.75
173 174 5.789521 TGCGGGAAAATATCGATCTATTCA 58.210 37.500 0.00 0.00 0.00 2.57
174 175 5.637810 TGCGGGAAAATATCGATCTATTCAC 59.362 40.000 0.00 5.21 0.00 3.18
175 176 5.063564 GCGGGAAAATATCGATCTATTCACC 59.936 44.000 0.00 4.74 0.00 4.02
176 177 6.398918 CGGGAAAATATCGATCTATTCACCT 58.601 40.000 0.00 0.00 0.00 4.00
177 178 6.874134 CGGGAAAATATCGATCTATTCACCTT 59.126 38.462 0.00 0.00 0.00 3.50
178 179 7.063544 CGGGAAAATATCGATCTATTCACCTTC 59.936 40.741 0.00 0.00 0.00 3.46
179 180 7.878127 GGGAAAATATCGATCTATTCACCTTCA 59.122 37.037 0.00 0.00 0.00 3.02
180 181 9.273016 GGAAAATATCGATCTATTCACCTTCAA 57.727 33.333 0.00 0.00 0.00 2.69
185 186 7.902387 ATCGATCTATTCACCTTCAATCATG 57.098 36.000 0.00 0.00 0.00 3.07
186 187 6.226052 TCGATCTATTCACCTTCAATCATGG 58.774 40.000 0.00 0.00 0.00 3.66
187 188 6.041979 TCGATCTATTCACCTTCAATCATGGA 59.958 38.462 0.00 0.00 0.00 3.41
188 189 6.707608 CGATCTATTCACCTTCAATCATGGAA 59.292 38.462 0.00 0.00 0.00 3.53
189 190 7.095313 CGATCTATTCACCTTCAATCATGGAAG 60.095 40.741 0.00 0.00 41.08 3.46
190 191 6.962182 TCTATTCACCTTCAATCATGGAAGT 58.038 36.000 0.87 0.00 40.06 3.01
191 192 8.089625 TCTATTCACCTTCAATCATGGAAGTA 57.910 34.615 0.87 0.00 40.06 2.24
192 193 7.987458 TCTATTCACCTTCAATCATGGAAGTAC 59.013 37.037 0.87 0.00 40.06 2.73
193 194 5.497464 TCACCTTCAATCATGGAAGTACA 57.503 39.130 0.87 0.00 40.06 2.90
194 195 5.875224 TCACCTTCAATCATGGAAGTACAA 58.125 37.500 0.87 0.00 40.06 2.41
195 196 5.705441 TCACCTTCAATCATGGAAGTACAAC 59.295 40.000 0.87 0.00 40.06 3.32
196 197 4.695455 ACCTTCAATCATGGAAGTACAACG 59.305 41.667 0.87 0.00 40.06 4.10
197 198 4.935205 CCTTCAATCATGGAAGTACAACGA 59.065 41.667 0.87 0.00 40.06 3.85
198 199 5.411361 CCTTCAATCATGGAAGTACAACGAA 59.589 40.000 0.87 0.00 40.06 3.85
199 200 5.856126 TCAATCATGGAAGTACAACGAAC 57.144 39.130 0.00 0.00 0.00 3.95
200 201 5.301555 TCAATCATGGAAGTACAACGAACA 58.698 37.500 0.00 0.00 0.00 3.18
201 202 5.178623 TCAATCATGGAAGTACAACGAACAC 59.821 40.000 0.00 0.00 0.00 3.32
202 203 4.330944 TCATGGAAGTACAACGAACACT 57.669 40.909 0.00 0.00 0.00 3.55
203 204 5.456548 TCATGGAAGTACAACGAACACTA 57.543 39.130 0.00 0.00 0.00 2.74
204 205 5.466819 TCATGGAAGTACAACGAACACTAG 58.533 41.667 0.00 0.00 0.00 2.57
205 206 5.242171 TCATGGAAGTACAACGAACACTAGA 59.758 40.000 0.00 0.00 0.00 2.43
206 207 5.518848 TGGAAGTACAACGAACACTAGAA 57.481 39.130 0.00 0.00 0.00 2.10
207 208 5.904941 TGGAAGTACAACGAACACTAGAAA 58.095 37.500 0.00 0.00 0.00 2.52
208 209 6.518493 TGGAAGTACAACGAACACTAGAAAT 58.482 36.000 0.00 0.00 0.00 2.17
209 210 7.660112 TGGAAGTACAACGAACACTAGAAATA 58.340 34.615 0.00 0.00 0.00 1.40
210 211 7.596248 TGGAAGTACAACGAACACTAGAAATAC 59.404 37.037 0.00 0.00 0.00 1.89
211 212 7.811713 GGAAGTACAACGAACACTAGAAATACT 59.188 37.037 0.00 0.00 0.00 2.12
212 213 9.831737 GAAGTACAACGAACACTAGAAATACTA 57.168 33.333 0.00 0.00 0.00 1.82
217 218 9.538508 ACAACGAACACTAGAAATACTAAAAGT 57.461 29.630 0.00 0.00 0.00 2.66
290 291 9.693739 TCAAAAATATTAATAGGTGGAAGCTCA 57.306 29.630 1.02 0.00 44.61 4.26
291 292 9.956720 CAAAAATATTAATAGGTGGAAGCTCAG 57.043 33.333 1.02 0.00 44.61 3.35
292 293 9.920946 AAAAATATTAATAGGTGGAAGCTCAGA 57.079 29.630 1.02 0.00 44.61 3.27
293 294 9.920946 AAAATATTAATAGGTGGAAGCTCAGAA 57.079 29.630 1.02 0.00 44.61 3.02
294 295 9.566432 AAATATTAATAGGTGGAAGCTCAGAAG 57.434 33.333 1.02 0.00 44.61 2.85
295 296 6.814954 ATTAATAGGTGGAAGCTCAGAAGA 57.185 37.500 0.00 0.00 44.61 2.87
296 297 6.620877 TTAATAGGTGGAAGCTCAGAAGAA 57.379 37.500 0.00 0.00 44.61 2.52
297 298 5.707066 AATAGGTGGAAGCTCAGAAGAAT 57.293 39.130 0.00 0.00 44.61 2.40
298 299 6.814954 AATAGGTGGAAGCTCAGAAGAATA 57.185 37.500 0.00 0.00 44.61 1.75
299 300 7.385894 AATAGGTGGAAGCTCAGAAGAATAT 57.614 36.000 0.00 0.00 44.61 1.28
300 301 8.497910 AATAGGTGGAAGCTCAGAAGAATATA 57.502 34.615 0.00 0.00 44.61 0.86
301 302 8.677870 ATAGGTGGAAGCTCAGAAGAATATAT 57.322 34.615 0.00 0.00 44.61 0.86
302 303 7.385894 AGGTGGAAGCTCAGAAGAATATATT 57.614 36.000 0.00 0.00 44.61 1.28
303 304 8.497910 AGGTGGAAGCTCAGAAGAATATATTA 57.502 34.615 0.00 0.00 44.61 0.98
304 305 8.938883 AGGTGGAAGCTCAGAAGAATATATTAA 58.061 33.333 0.00 0.00 44.61 1.40
305 306 9.732130 GGTGGAAGCTCAGAAGAATATATTAAT 57.268 33.333 0.00 0.00 0.00 1.40
331 332 4.445452 TTTTTCGAGAGTACGCCTATGT 57.555 40.909 0.00 0.00 0.00 2.29
332 333 3.416119 TTTCGAGAGTACGCCTATGTG 57.584 47.619 0.00 0.00 0.00 3.21
333 334 2.034104 TCGAGAGTACGCCTATGTGT 57.966 50.000 0.00 0.00 39.01 3.72
334 335 3.183793 TCGAGAGTACGCCTATGTGTA 57.816 47.619 0.00 0.00 36.42 2.90
335 336 3.736720 TCGAGAGTACGCCTATGTGTAT 58.263 45.455 0.00 0.00 39.50 2.29
336 337 3.744942 TCGAGAGTACGCCTATGTGTATC 59.255 47.826 0.00 0.00 39.50 2.24
337 338 3.497262 CGAGAGTACGCCTATGTGTATCA 59.503 47.826 0.00 0.00 39.50 2.15
338 339 4.154375 CGAGAGTACGCCTATGTGTATCAT 59.846 45.833 0.00 0.00 39.50 2.45
339 340 5.350640 CGAGAGTACGCCTATGTGTATCATA 59.649 44.000 0.00 0.00 39.50 2.15
366 367 8.606727 CTTTATAGAAAGCGGAATTTGAACTG 57.393 34.615 0.00 0.00 35.92 3.16
367 368 7.681939 TTATAGAAAGCGGAATTTGAACTGT 57.318 32.000 0.00 0.00 0.00 3.55
368 369 8.780846 TTATAGAAAGCGGAATTTGAACTGTA 57.219 30.769 0.00 0.00 0.00 2.74
369 370 7.681939 ATAGAAAGCGGAATTTGAACTGTAA 57.318 32.000 0.00 0.00 0.00 2.41
370 371 6.002062 AGAAAGCGGAATTTGAACTGTAAG 57.998 37.500 0.00 0.00 42.29 2.34
371 372 5.763204 AGAAAGCGGAATTTGAACTGTAAGA 59.237 36.000 0.00 0.00 37.43 2.10
372 373 6.262273 AGAAAGCGGAATTTGAACTGTAAGAA 59.738 34.615 0.00 0.00 37.43 2.52
373 374 5.358298 AGCGGAATTTGAACTGTAAGAAC 57.642 39.130 0.00 0.00 37.43 3.01
374 375 4.819630 AGCGGAATTTGAACTGTAAGAACA 59.180 37.500 0.00 0.00 37.43 3.18
375 376 5.473504 AGCGGAATTTGAACTGTAAGAACAT 59.526 36.000 0.00 0.00 37.43 2.71
376 377 6.016276 AGCGGAATTTGAACTGTAAGAACATT 60.016 34.615 0.00 0.00 37.43 2.71
377 378 7.174253 AGCGGAATTTGAACTGTAAGAACATTA 59.826 33.333 0.00 0.00 37.43 1.90
378 379 7.806014 GCGGAATTTGAACTGTAAGAACATTAA 59.194 33.333 0.00 0.00 37.43 1.40
379 380 9.113876 CGGAATTTGAACTGTAAGAACATTAAC 57.886 33.333 0.00 0.00 37.43 2.01
380 381 9.959749 GGAATTTGAACTGTAAGAACATTAACA 57.040 29.630 0.00 0.00 37.43 2.41
384 385 7.402811 TGAACTGTAAGAACATTAACACTCG 57.597 36.000 0.00 0.00 37.43 4.18
385 386 5.840940 ACTGTAAGAACATTAACACTCGC 57.159 39.130 0.00 0.00 37.43 5.03
386 387 5.539048 ACTGTAAGAACATTAACACTCGCT 58.461 37.500 0.00 0.00 37.43 4.93
387 388 6.684686 ACTGTAAGAACATTAACACTCGCTA 58.315 36.000 0.00 0.00 37.43 4.26
388 389 6.585322 ACTGTAAGAACATTAACACTCGCTAC 59.415 38.462 0.00 0.00 37.43 3.58
389 390 5.570206 TGTAAGAACATTAACACTCGCTACG 59.430 40.000 0.00 0.00 0.00 3.51
390 391 4.430137 AGAACATTAACACTCGCTACGA 57.570 40.909 0.00 0.00 0.00 3.43
391 392 4.801891 AGAACATTAACACTCGCTACGAA 58.198 39.130 0.00 0.00 34.74 3.85
392 393 4.620184 AGAACATTAACACTCGCTACGAAC 59.380 41.667 0.00 0.00 34.74 3.95
393 394 3.904571 ACATTAACACTCGCTACGAACA 58.095 40.909 0.00 0.00 34.74 3.18
394 395 4.300803 ACATTAACACTCGCTACGAACAA 58.699 39.130 0.00 0.00 34.74 2.83
395 396 4.149396 ACATTAACACTCGCTACGAACAAC 59.851 41.667 0.00 0.00 34.74 3.32
397 398 0.308684 ACACTCGCTACGAACAACGA 59.691 50.000 0.00 0.00 45.77 3.85
399 400 1.981668 CTCGCTACGAACAACGAGC 59.018 57.895 0.00 0.00 44.56 5.03
401 402 3.838468 GCTACGAACAACGAGCGT 58.162 55.556 0.00 0.00 45.77 5.07
402 403 3.005823 GCTACGAACAACGAGCGTA 57.994 52.632 0.00 0.00 45.77 4.42
418 419 0.865769 CGTAGCAAGAACACCACACC 59.134 55.000 0.00 0.00 0.00 4.16
419 420 1.808512 CGTAGCAAGAACACCACACCA 60.809 52.381 0.00 0.00 0.00 4.17
420 421 1.602377 GTAGCAAGAACACCACACCAC 59.398 52.381 0.00 0.00 0.00 4.16
421 422 0.034574 AGCAAGAACACCACACCACA 60.035 50.000 0.00 0.00 0.00 4.17
422 423 0.100503 GCAAGAACACCACACCACAC 59.899 55.000 0.00 0.00 0.00 3.82
423 424 0.738389 CAAGAACACCACACCACACC 59.262 55.000 0.00 0.00 0.00 4.16
424 425 0.395173 AAGAACACCACACCACACCC 60.395 55.000 0.00 0.00 0.00 4.61
425 426 2.124487 AACACCACACCACACCCG 60.124 61.111 0.00 0.00 0.00 5.28
426 427 3.707640 AACACCACACCACACCCGG 62.708 63.158 0.00 0.00 0.00 5.73
427 428 4.947147 CACCACACCACACCCGGG 62.947 72.222 22.25 22.25 0.00 5.73
430 431 4.885270 CACACCACACCCGGGCAA 62.885 66.667 24.08 0.00 0.00 4.52
431 432 4.579384 ACACCACACCCGGGCAAG 62.579 66.667 24.08 14.08 0.00 4.01
432 433 4.579384 CACCACACCCGGGCAAGT 62.579 66.667 24.08 14.86 0.00 3.16
433 434 4.265056 ACCACACCCGGGCAAGTC 62.265 66.667 24.08 0.00 0.00 3.01
435 436 4.263572 CACACCCGGGCAAGTCCA 62.264 66.667 24.08 0.00 36.21 4.02
436 437 4.265056 ACACCCGGGCAAGTCCAC 62.265 66.667 24.08 0.00 36.21 4.02
437 438 3.953775 CACCCGGGCAAGTCCACT 61.954 66.667 24.08 0.00 36.21 4.00
438 439 3.953775 ACCCGGGCAAGTCCACTG 61.954 66.667 24.08 0.00 36.21 3.66
439 440 3.636231 CCCGGGCAAGTCCACTGA 61.636 66.667 8.08 0.00 36.21 3.41
440 441 2.358737 CCGGGCAAGTCCACTGAC 60.359 66.667 0.00 0.00 42.09 3.51
441 442 2.425592 CGGGCAAGTCCACTGACA 59.574 61.111 0.00 0.00 44.33 3.58
442 443 1.669115 CGGGCAAGTCCACTGACAG 60.669 63.158 0.00 0.00 44.33 3.51
443 444 1.968540 GGGCAAGTCCACTGACAGC 60.969 63.158 1.25 0.00 44.33 4.40
444 445 3.660621 GCAAGTCCACTGACAGCC 58.339 61.111 1.25 0.00 44.33 4.85
445 446 1.227943 GCAAGTCCACTGACAGCCA 60.228 57.895 1.25 0.00 44.33 4.75
446 447 0.607489 GCAAGTCCACTGACAGCCAT 60.607 55.000 1.25 0.00 44.33 4.40
447 448 1.446907 CAAGTCCACTGACAGCCATC 58.553 55.000 1.25 0.00 44.33 3.51
448 449 0.036952 AAGTCCACTGACAGCCATCG 60.037 55.000 1.25 0.00 44.33 3.84
449 450 0.900182 AGTCCACTGACAGCCATCGA 60.900 55.000 1.25 0.00 44.33 3.59
450 451 0.176680 GTCCACTGACAGCCATCGAT 59.823 55.000 1.25 0.00 41.37 3.59
451 452 0.176449 TCCACTGACAGCCATCGATG 59.824 55.000 18.76 18.76 0.00 3.84
452 453 0.176449 CCACTGACAGCCATCGATGA 59.824 55.000 26.86 4.48 0.00 2.92
453 454 1.284657 CACTGACAGCCATCGATGAC 58.715 55.000 26.86 15.88 0.00 3.06
454 455 0.176680 ACTGACAGCCATCGATGACC 59.823 55.000 26.86 16.18 0.00 4.02
455 456 0.176449 CTGACAGCCATCGATGACCA 59.824 55.000 26.86 14.07 0.00 4.02
456 457 0.612744 TGACAGCCATCGATGACCAA 59.387 50.000 26.86 4.33 0.00 3.67
457 458 1.003003 TGACAGCCATCGATGACCAAA 59.997 47.619 26.86 4.88 0.00 3.28
458 459 1.398390 GACAGCCATCGATGACCAAAC 59.602 52.381 26.86 9.38 0.00 2.93
459 460 1.271325 ACAGCCATCGATGACCAAACA 60.271 47.619 26.86 0.00 0.00 2.83
460 461 1.811965 CAGCCATCGATGACCAAACAA 59.188 47.619 26.86 0.00 0.00 2.83
461 462 2.228582 CAGCCATCGATGACCAAACAAA 59.771 45.455 26.86 0.00 0.00 2.83
462 463 2.890311 AGCCATCGATGACCAAACAAAA 59.110 40.909 26.86 0.00 0.00 2.44
463 464 2.986479 GCCATCGATGACCAAACAAAAC 59.014 45.455 26.86 0.00 0.00 2.43
464 465 3.305335 GCCATCGATGACCAAACAAAACT 60.305 43.478 26.86 0.00 0.00 2.66
465 466 4.083003 GCCATCGATGACCAAACAAAACTA 60.083 41.667 26.86 0.00 0.00 2.24
466 467 5.390613 CCATCGATGACCAAACAAAACTAC 58.609 41.667 26.86 0.00 0.00 2.73
467 468 5.049060 CCATCGATGACCAAACAAAACTACA 60.049 40.000 26.86 0.00 0.00 2.74
468 469 6.434596 CATCGATGACCAAACAAAACTACAA 58.565 36.000 21.02 0.00 0.00 2.41
469 470 6.055231 TCGATGACCAAACAAAACTACAAG 57.945 37.500 0.00 0.00 0.00 3.16
470 471 4.675114 CGATGACCAAACAAAACTACAAGC 59.325 41.667 0.00 0.00 0.00 4.01
471 472 5.587289 GATGACCAAACAAAACTACAAGCA 58.413 37.500 0.00 0.00 0.00 3.91
472 473 5.392767 TGACCAAACAAAACTACAAGCAA 57.607 34.783 0.00 0.00 0.00 3.91
473 474 5.784177 TGACCAAACAAAACTACAAGCAAA 58.216 33.333 0.00 0.00 0.00 3.68
474 475 6.402222 TGACCAAACAAAACTACAAGCAAAT 58.598 32.000 0.00 0.00 0.00 2.32
475 476 7.548097 TGACCAAACAAAACTACAAGCAAATA 58.452 30.769 0.00 0.00 0.00 1.40
476 477 7.704472 TGACCAAACAAAACTACAAGCAAATAG 59.296 33.333 0.00 0.00 0.00 1.73
477 478 7.552459 ACCAAACAAAACTACAAGCAAATAGT 58.448 30.769 0.00 0.00 32.93 2.12
478 479 7.704899 ACCAAACAAAACTACAAGCAAATAGTC 59.295 33.333 0.00 0.00 31.15 2.59
479 480 7.920682 CCAAACAAAACTACAAGCAAATAGTCT 59.079 33.333 0.00 0.00 31.15 3.24
480 481 8.745837 CAAACAAAACTACAAGCAAATAGTCTG 58.254 33.333 0.00 0.00 31.15 3.51
481 482 6.970484 ACAAAACTACAAGCAAATAGTCTGG 58.030 36.000 0.00 0.00 31.15 3.86
482 483 5.629079 AAACTACAAGCAAATAGTCTGGC 57.371 39.130 0.00 0.00 31.15 4.85
483 484 3.610911 ACTACAAGCAAATAGTCTGGCC 58.389 45.455 0.00 0.00 0.00 5.36
484 485 2.887151 ACAAGCAAATAGTCTGGCCT 57.113 45.000 3.32 0.00 0.00 5.19
485 486 4.469945 ACTACAAGCAAATAGTCTGGCCTA 59.530 41.667 3.32 0.00 0.00 3.93
486 487 4.301072 ACAAGCAAATAGTCTGGCCTAA 57.699 40.909 3.32 0.00 0.00 2.69
487 488 4.010349 ACAAGCAAATAGTCTGGCCTAAC 58.990 43.478 3.32 1.49 0.00 2.34
488 489 4.263506 ACAAGCAAATAGTCTGGCCTAACT 60.264 41.667 3.32 10.14 0.00 2.24
489 490 3.878778 AGCAAATAGTCTGGCCTAACTG 58.121 45.455 17.70 5.96 0.00 3.16
490 491 3.519510 AGCAAATAGTCTGGCCTAACTGA 59.480 43.478 17.70 5.64 0.00 3.41
491 492 3.873952 GCAAATAGTCTGGCCTAACTGAG 59.126 47.826 17.70 0.21 0.00 3.35
492 493 4.383118 GCAAATAGTCTGGCCTAACTGAGA 60.383 45.833 17.70 2.69 0.00 3.27
493 494 5.734720 CAAATAGTCTGGCCTAACTGAGAA 58.265 41.667 17.70 1.79 0.00 2.87
494 495 5.346181 AATAGTCTGGCCTAACTGAGAAC 57.654 43.478 17.70 1.76 0.00 3.01
495 496 2.609747 AGTCTGGCCTAACTGAGAACA 58.390 47.619 3.32 0.00 0.00 3.18
496 497 2.972713 AGTCTGGCCTAACTGAGAACAA 59.027 45.455 3.32 0.00 0.00 2.83
497 498 3.067833 GTCTGGCCTAACTGAGAACAAC 58.932 50.000 3.32 0.00 0.00 3.32
498 499 2.703536 TCTGGCCTAACTGAGAACAACA 59.296 45.455 3.32 0.00 0.00 3.33
499 500 2.808543 CTGGCCTAACTGAGAACAACAC 59.191 50.000 3.32 0.00 0.00 3.32
500 501 2.152016 GGCCTAACTGAGAACAACACC 58.848 52.381 0.00 0.00 0.00 4.16
501 502 1.798813 GCCTAACTGAGAACAACACCG 59.201 52.381 0.00 0.00 0.00 4.94
502 503 1.798813 CCTAACTGAGAACAACACCGC 59.201 52.381 0.00 0.00 0.00 5.68
503 504 2.479837 CTAACTGAGAACAACACCGCA 58.520 47.619 0.00 0.00 0.00 5.69
504 505 1.967319 AACTGAGAACAACACCGCAT 58.033 45.000 0.00 0.00 0.00 4.73
505 506 1.512926 ACTGAGAACAACACCGCATC 58.487 50.000 0.00 0.00 0.00 3.91
506 507 1.202639 ACTGAGAACAACACCGCATCA 60.203 47.619 0.00 0.00 0.00 3.07
507 508 1.195448 CTGAGAACAACACCGCATCAC 59.805 52.381 0.00 0.00 0.00 3.06
508 509 0.163788 GAGAACAACACCGCATCACG 59.836 55.000 0.00 0.00 43.15 4.35
536 537 2.047179 GGCACCTCCGAAGACCAC 60.047 66.667 0.00 0.00 0.00 4.16
537 538 2.741092 GCACCTCCGAAGACCACA 59.259 61.111 0.00 0.00 0.00 4.17
538 539 1.070786 GCACCTCCGAAGACCACAA 59.929 57.895 0.00 0.00 0.00 3.33
539 540 1.228657 GCACCTCCGAAGACCACAAC 61.229 60.000 0.00 0.00 0.00 3.32
540 541 0.393077 CACCTCCGAAGACCACAACT 59.607 55.000 0.00 0.00 0.00 3.16
541 542 1.129058 ACCTCCGAAGACCACAACTT 58.871 50.000 0.00 0.00 0.00 2.66
542 543 1.070289 ACCTCCGAAGACCACAACTTC 59.930 52.381 0.00 0.00 39.92 3.01
543 544 1.344763 CCTCCGAAGACCACAACTTCT 59.655 52.381 0.00 0.00 40.78 2.85
544 545 2.610727 CCTCCGAAGACCACAACTTCTC 60.611 54.545 0.00 0.00 40.78 2.87
545 546 1.343465 TCCGAAGACCACAACTTCTCC 59.657 52.381 0.00 0.00 40.78 3.71
546 547 1.344763 CCGAAGACCACAACTTCTCCT 59.655 52.381 0.00 0.00 40.78 3.69
547 548 2.408050 CGAAGACCACAACTTCTCCTG 58.592 52.381 0.00 0.00 40.78 3.86
548 549 2.772287 GAAGACCACAACTTCTCCTGG 58.228 52.381 0.00 0.00 40.10 4.45
549 550 2.103153 AGACCACAACTTCTCCTGGA 57.897 50.000 0.00 0.00 0.00 3.86
550 551 1.694696 AGACCACAACTTCTCCTGGAC 59.305 52.381 0.00 0.00 0.00 4.02
551 552 1.694696 GACCACAACTTCTCCTGGACT 59.305 52.381 0.00 0.00 0.00 3.85
552 553 2.104963 GACCACAACTTCTCCTGGACTT 59.895 50.000 0.00 0.00 0.00 3.01
553 554 2.509964 ACCACAACTTCTCCTGGACTTT 59.490 45.455 0.00 0.00 0.00 2.66
554 555 2.880890 CCACAACTTCTCCTGGACTTTG 59.119 50.000 0.00 0.00 0.00 2.77
555 556 2.291741 CACAACTTCTCCTGGACTTTGC 59.708 50.000 0.00 0.00 0.00 3.68
556 557 2.173569 ACAACTTCTCCTGGACTTTGCT 59.826 45.455 0.00 0.00 0.00 3.91
557 558 2.810852 CAACTTCTCCTGGACTTTGCTC 59.189 50.000 0.00 0.00 0.00 4.26
558 559 1.001406 ACTTCTCCTGGACTTTGCTCG 59.999 52.381 0.00 0.00 0.00 5.03
559 560 1.001406 CTTCTCCTGGACTTTGCTCGT 59.999 52.381 0.00 0.00 0.00 4.18
560 561 0.603569 TCTCCTGGACTTTGCTCGTC 59.396 55.000 0.00 0.00 0.00 4.20
561 562 0.734253 CTCCTGGACTTTGCTCGTCG 60.734 60.000 0.00 0.00 32.24 5.12
562 563 1.176619 TCCTGGACTTTGCTCGTCGA 61.177 55.000 0.00 0.00 32.24 4.20
563 564 1.009389 CCTGGACTTTGCTCGTCGAC 61.009 60.000 5.18 5.18 32.24 4.20
564 565 1.337817 CTGGACTTTGCTCGTCGACG 61.338 60.000 31.30 31.30 41.45 5.12
565 566 2.717809 GGACTTTGCTCGTCGACGC 61.718 63.158 32.19 19.90 39.60 5.19
566 567 2.014554 GACTTTGCTCGTCGACGCA 61.015 57.895 32.19 22.33 39.60 5.24
567 568 2.199467 GACTTTGCTCGTCGACGCAC 62.199 60.000 32.19 24.88 39.60 5.34
568 569 3.000080 CTTTGCTCGTCGACGCACC 62.000 63.158 32.19 21.30 39.60 5.01
569 570 3.776659 TTTGCTCGTCGACGCACCA 62.777 57.895 32.19 23.45 39.60 4.17
570 571 3.567478 TTGCTCGTCGACGCACCAT 62.567 57.895 32.19 0.00 39.60 3.55
571 572 2.101575 GCTCGTCGACGCACCATA 59.898 61.111 32.19 13.67 39.60 2.74
572 573 2.222217 GCTCGTCGACGCACCATAC 61.222 63.158 32.19 12.13 39.60 2.39
573 574 1.135939 CTCGTCGACGCACCATACA 59.864 57.895 32.19 12.14 39.60 2.29
574 575 1.132199 CTCGTCGACGCACCATACAC 61.132 60.000 32.19 0.00 39.60 2.90
575 576 2.156446 CGTCGACGCACCATACACC 61.156 63.158 26.59 0.00 0.00 4.16
576 577 1.808390 GTCGACGCACCATACACCC 60.808 63.158 0.00 0.00 0.00 4.61
577 578 1.980232 TCGACGCACCATACACCCT 60.980 57.895 0.00 0.00 0.00 4.34
578 579 1.079405 CGACGCACCATACACCCTT 60.079 57.895 0.00 0.00 0.00 3.95
579 580 1.358725 CGACGCACCATACACCCTTG 61.359 60.000 0.00 0.00 0.00 3.61
580 581 0.321298 GACGCACCATACACCCTTGT 60.321 55.000 0.00 0.00 40.02 3.16
581 582 0.978151 ACGCACCATACACCCTTGTA 59.022 50.000 0.00 0.00 42.53 2.41
591 592 2.119495 ACACCCTTGTATGCCTAGAGG 58.881 52.381 0.00 0.00 32.60 3.69
592 593 2.292918 ACACCCTTGTATGCCTAGAGGA 60.293 50.000 0.00 0.00 33.02 3.71
593 594 2.366916 CACCCTTGTATGCCTAGAGGAG 59.633 54.545 0.00 0.00 37.39 3.69
594 595 7.931418 TACACCCTTGTATGCCTAGAGGAGG 62.931 52.000 0.00 0.00 41.95 4.30
602 603 2.998493 CCTAGAGGAGGTGGCAAGT 58.002 57.895 0.00 0.00 40.98 3.16
603 604 0.539051 CCTAGAGGAGGTGGCAAGTG 59.461 60.000 0.00 0.00 40.98 3.16
604 605 0.539051 CTAGAGGAGGTGGCAAGTGG 59.461 60.000 0.00 0.00 0.00 4.00
605 606 0.116342 TAGAGGAGGTGGCAAGTGGA 59.884 55.000 0.00 0.00 0.00 4.02
606 607 0.548682 AGAGGAGGTGGCAAGTGGAT 60.549 55.000 0.00 0.00 0.00 3.41
607 608 0.393537 GAGGAGGTGGCAAGTGGATG 60.394 60.000 0.00 0.00 0.00 3.51
608 609 1.379044 GGAGGTGGCAAGTGGATGG 60.379 63.158 0.00 0.00 0.00 3.51
609 610 2.036256 AGGTGGCAAGTGGATGGC 59.964 61.111 0.00 0.00 45.44 4.40
613 614 2.356278 GGCAAGTGGATGGCAGGA 59.644 61.111 0.00 0.00 44.66 3.86
614 615 2.048603 GGCAAGTGGATGGCAGGAC 61.049 63.158 0.00 0.00 44.66 3.85
615 616 1.001641 GCAAGTGGATGGCAGGACT 60.002 57.895 0.00 0.00 0.00 3.85
616 617 0.610232 GCAAGTGGATGGCAGGACTT 60.610 55.000 0.00 0.00 0.00 3.01
617 618 1.171308 CAAGTGGATGGCAGGACTTG 58.829 55.000 16.80 16.80 39.39 3.16
628 629 2.662006 CAGGACTTGCTCAGAATCGA 57.338 50.000 0.00 0.00 0.00 3.59
629 630 2.538437 CAGGACTTGCTCAGAATCGAG 58.462 52.381 0.00 0.00 36.02 4.04
630 631 1.480137 AGGACTTGCTCAGAATCGAGG 59.520 52.381 0.00 0.00 33.36 4.63
631 632 1.478510 GGACTTGCTCAGAATCGAGGA 59.521 52.381 0.00 0.00 33.36 3.71
632 633 2.093973 GGACTTGCTCAGAATCGAGGAA 60.094 50.000 8.19 8.19 40.56 3.36
635 636 3.961480 TTGCTCAGAATCGAGGAAGAA 57.039 42.857 5.36 0.00 38.29 2.52
636 637 4.478206 TTGCTCAGAATCGAGGAAGAAT 57.522 40.909 5.36 0.00 38.29 2.40
637 638 5.598416 TTGCTCAGAATCGAGGAAGAATA 57.402 39.130 5.36 0.00 38.29 1.75
638 639 5.798125 TGCTCAGAATCGAGGAAGAATAT 57.202 39.130 0.00 0.00 33.36 1.28
639 640 6.901081 TGCTCAGAATCGAGGAAGAATATA 57.099 37.500 0.00 0.00 33.36 0.86
640 641 7.290110 TGCTCAGAATCGAGGAAGAATATAA 57.710 36.000 0.00 0.00 33.36 0.98
641 642 7.901029 TGCTCAGAATCGAGGAAGAATATAAT 58.099 34.615 0.00 0.00 33.36 1.28
642 643 9.025041 TGCTCAGAATCGAGGAAGAATATAATA 57.975 33.333 0.00 0.00 33.36 0.98
673 674 4.703379 AATATGAAGGAAGCCTCTCCTG 57.297 45.455 0.56 0.00 45.59 3.86
674 675 1.963985 ATGAAGGAAGCCTCTCCTGT 58.036 50.000 0.56 0.00 45.59 4.00
675 676 0.979665 TGAAGGAAGCCTCTCCTGTG 59.020 55.000 0.56 0.00 45.59 3.66
676 677 0.980423 GAAGGAAGCCTCTCCTGTGT 59.020 55.000 0.56 0.00 45.59 3.72
677 678 0.689623 AAGGAAGCCTCTCCTGTGTG 59.310 55.000 0.56 0.00 45.59 3.82
678 679 1.197430 AGGAAGCCTCTCCTGTGTGG 61.197 60.000 0.00 0.00 44.56 4.17
679 680 1.194781 GGAAGCCTCTCCTGTGTGGA 61.195 60.000 0.00 0.00 43.86 4.02
680 681 0.908198 GAAGCCTCTCCTGTGTGGAT 59.092 55.000 0.00 0.00 45.16 3.41
681 682 1.280421 GAAGCCTCTCCTGTGTGGATT 59.720 52.381 0.00 0.00 45.16 3.01
682 683 1.366319 AGCCTCTCCTGTGTGGATTT 58.634 50.000 0.00 0.00 45.16 2.17
683 684 1.707427 AGCCTCTCCTGTGTGGATTTT 59.293 47.619 0.00 0.00 45.16 1.82
684 685 2.912956 AGCCTCTCCTGTGTGGATTTTA 59.087 45.455 0.00 0.00 45.16 1.52
685 686 3.525199 AGCCTCTCCTGTGTGGATTTTAT 59.475 43.478 0.00 0.00 45.16 1.40
686 687 4.018050 AGCCTCTCCTGTGTGGATTTTATT 60.018 41.667 0.00 0.00 45.16 1.40
687 688 4.336713 GCCTCTCCTGTGTGGATTTTATTC 59.663 45.833 0.00 0.00 45.16 1.75
688 689 5.749462 CCTCTCCTGTGTGGATTTTATTCT 58.251 41.667 0.00 0.00 45.16 2.40
689 690 5.819901 CCTCTCCTGTGTGGATTTTATTCTC 59.180 44.000 0.00 0.00 45.16 2.87
690 691 6.352565 CCTCTCCTGTGTGGATTTTATTCTCT 60.353 42.308 0.00 0.00 45.16 3.10
691 692 6.409704 TCTCCTGTGTGGATTTTATTCTCTG 58.590 40.000 0.00 0.00 45.16 3.35
692 693 6.013379 TCTCCTGTGTGGATTTTATTCTCTGT 60.013 38.462 0.00 0.00 45.16 3.41
693 694 6.173339 TCCTGTGTGGATTTTATTCTCTGTC 58.827 40.000 0.00 0.00 40.56 3.51
694 695 6.013379 TCCTGTGTGGATTTTATTCTCTGTCT 60.013 38.462 0.00 0.00 40.56 3.41
726 727 5.486526 ACATGTTGTGTGGATTTTGTTTGT 58.513 33.333 0.00 0.00 40.28 2.83
731 732 7.251994 TGTTGTGTGGATTTTGTTTGTACTAC 58.748 34.615 0.00 0.00 0.00 2.73
740 741 7.548780 GGATTTTGTTTGTACTACGGTATGGTA 59.451 37.037 0.00 0.00 0.00 3.25
750 751 2.814280 CGGTATGGTAGCGGAGAAAT 57.186 50.000 1.00 0.00 45.08 2.17
1299 1350 2.525629 TCAGTCACTTCCCCGGCA 60.526 61.111 0.00 0.00 0.00 5.69
1611 1709 1.971695 CAACTTCGGGCCCAAGGTC 60.972 63.158 27.37 2.12 0.00 3.85
1650 1768 1.296392 GCCCCCAAAATTGCAGTCC 59.704 57.895 0.00 0.00 0.00 3.85
1652 1770 1.894978 GCCCCCAAAATTGCAGTCCTA 60.895 52.381 0.00 0.00 0.00 2.94
1655 1773 4.285863 CCCCCAAAATTGCAGTCCTATTA 58.714 43.478 0.00 0.00 0.00 0.98
1704 1848 5.593909 TGCACCTTTCTTTTCATCTTCTTCA 59.406 36.000 0.00 0.00 0.00 3.02
1850 2380 5.695851 TGTTTCAGAAGGCTTCAGAAATC 57.304 39.130 35.04 28.89 43.75 2.17
1857 2387 5.811613 CAGAAGGCTTCAGAAATCAGTAGAG 59.188 44.000 27.70 0.00 0.00 2.43
1858 2388 5.719085 AGAAGGCTTCAGAAATCAGTAGAGA 59.281 40.000 27.70 0.00 0.00 3.10
1859 2389 6.212388 AGAAGGCTTCAGAAATCAGTAGAGAA 59.788 38.462 27.70 0.00 0.00 2.87
1860 2390 6.558488 AGGCTTCAGAAATCAGTAGAGAAT 57.442 37.500 0.00 0.00 0.00 2.40
1861 2391 6.956497 AGGCTTCAGAAATCAGTAGAGAATT 58.044 36.000 0.00 0.00 0.00 2.17
1862 2392 6.822676 AGGCTTCAGAAATCAGTAGAGAATTG 59.177 38.462 0.00 0.00 0.00 2.32
1863 2393 6.597280 GGCTTCAGAAATCAGTAGAGAATTGT 59.403 38.462 0.00 0.00 0.00 2.71
1864 2394 7.120432 GGCTTCAGAAATCAGTAGAGAATTGTT 59.880 37.037 0.00 0.00 0.00 2.83
1865 2395 8.510505 GCTTCAGAAATCAGTAGAGAATTGTTT 58.489 33.333 0.00 0.00 0.00 2.83
1867 2397 9.559732 TTCAGAAATCAGTAGAGAATTGTTTCA 57.440 29.630 0.00 0.00 34.08 2.69
1868 2398 9.212641 TCAGAAATCAGTAGAGAATTGTTTCAG 57.787 33.333 0.00 0.00 34.08 3.02
1869 2399 9.212641 CAGAAATCAGTAGAGAATTGTTTCAGA 57.787 33.333 0.00 0.00 34.08 3.27
1870 2400 9.784531 AGAAATCAGTAGAGAATTGTTTCAGAA 57.215 29.630 0.00 0.00 34.08 3.02
1872 2402 8.558973 AATCAGTAGAGAATTGTTTCAGAAGG 57.441 34.615 0.00 0.00 34.08 3.46
1873 2403 5.934625 TCAGTAGAGAATTGTTTCAGAAGGC 59.065 40.000 0.00 0.00 34.08 4.35
1874 2404 5.936956 CAGTAGAGAATTGTTTCAGAAGGCT 59.063 40.000 0.00 0.00 34.08 4.58
1875 2405 6.429385 CAGTAGAGAATTGTTTCAGAAGGCTT 59.571 38.462 0.00 0.00 34.08 4.35
1876 2406 5.956068 AGAGAATTGTTTCAGAAGGCTTC 57.044 39.130 19.53 19.53 34.08 3.86
1877 2407 5.380043 AGAGAATTGTTTCAGAAGGCTTCA 58.620 37.500 27.70 6.60 34.08 3.02
1878 2408 5.472820 AGAGAATTGTTTCAGAAGGCTTCAG 59.527 40.000 27.70 20.52 34.08 3.02
1879 2409 5.380043 AGAATTGTTTCAGAAGGCTTCAGA 58.620 37.500 27.70 22.49 34.08 3.27
1880 2410 5.829924 AGAATTGTTTCAGAAGGCTTCAGAA 59.170 36.000 25.49 25.49 34.02 3.02
1881 2411 6.322201 AGAATTGTTTCAGAAGGCTTCAGAAA 59.678 34.615 31.60 31.60 41.10 2.52
1882 2412 6.661304 ATTGTTTCAGAAGGCTTCAGAAAT 57.339 33.333 35.04 23.74 43.75 2.17
1883 2413 5.695851 TGTTTCAGAAGGCTTCAGAAATC 57.304 39.130 35.04 28.89 43.75 2.17
1884 2414 5.132502 TGTTTCAGAAGGCTTCAGAAATCA 58.867 37.500 35.04 30.31 43.75 2.57
1885 2415 5.240183 TGTTTCAGAAGGCTTCAGAAATCAG 59.760 40.000 35.04 15.00 43.75 2.90
1886 2416 4.630644 TCAGAAGGCTTCAGAAATCAGT 57.369 40.909 27.70 2.01 0.00 3.41
1887 2417 5.745312 TCAGAAGGCTTCAGAAATCAGTA 57.255 39.130 27.70 0.00 0.00 2.74
1888 2418 5.728471 TCAGAAGGCTTCAGAAATCAGTAG 58.272 41.667 27.70 4.31 0.00 2.57
1889 2419 5.481824 TCAGAAGGCTTCAGAAATCAGTAGA 59.518 40.000 27.70 6.29 0.00 2.59
1890 2420 6.014242 TCAGAAGGCTTCAGAAATCAGTAGAA 60.014 38.462 27.70 0.00 0.00 2.10
1891 2421 6.822676 CAGAAGGCTTCAGAAATCAGTAGAAT 59.177 38.462 27.70 0.00 0.00 2.40
1892 2422 6.822676 AGAAGGCTTCAGAAATCAGTAGAATG 59.177 38.462 27.70 0.00 0.00 2.67
1921 2455 7.014518 TGTTTGATTCAGTCCTTGTTTGATCAT 59.985 33.333 0.00 0.00 0.00 2.45
1922 2456 6.505044 TGATTCAGTCCTTGTTTGATCATG 57.495 37.500 0.00 0.00 0.00 3.07
1953 2489 3.810743 GCAGGGTATCCTTGCGGAAATAT 60.811 47.826 7.10 0.00 44.02 1.28
2051 2648 3.192844 CAGCATTGCATCAGAAGGTTCTT 59.807 43.478 11.91 0.00 34.74 2.52
2065 2665 1.337823 GGTTCTTGCTTCCTACTCGCA 60.338 52.381 0.00 0.00 0.00 5.10
2072 2672 3.609853 TGCTTCCTACTCGCAATCAAAT 58.390 40.909 0.00 0.00 0.00 2.32
2090 2690 9.372541 CAATCAAATTTTTGTGTGTATTGCTTC 57.627 29.630 3.18 0.00 39.18 3.86
2110 2710 5.529800 GCTTCCTTTCTAGTGTGGTTTTACA 59.470 40.000 0.00 0.00 0.00 2.41
2186 2786 0.320374 TCGGAAATGCTTCAGACCGT 59.680 50.000 0.00 0.00 40.93 4.83
3442 4068 1.063616 GTTTTAATTCGCCGCTCCCTC 59.936 52.381 0.00 0.00 0.00 4.30
3492 4118 3.088532 TCGGCAAGTAAGCATTTTCCAT 58.911 40.909 0.00 0.00 35.83 3.41
3598 4225 5.766150 TGTCACAAAACCACCTTGATTAG 57.234 39.130 0.00 0.00 0.00 1.73
3599 4226 5.441500 TGTCACAAAACCACCTTGATTAGA 58.558 37.500 0.00 0.00 0.00 2.10
3600 4227 6.068010 TGTCACAAAACCACCTTGATTAGAT 58.932 36.000 0.00 0.00 0.00 1.98
3601 4228 7.227873 TGTCACAAAACCACCTTGATTAGATA 58.772 34.615 0.00 0.00 0.00 1.98
3602 4229 7.174253 TGTCACAAAACCACCTTGATTAGATAC 59.826 37.037 0.00 0.00 0.00 2.24
3603 4230 6.657541 TCACAAAACCACCTTGATTAGATACC 59.342 38.462 0.00 0.00 0.00 2.73
3604 4231 6.659242 CACAAAACCACCTTGATTAGATACCT 59.341 38.462 0.00 0.00 0.00 3.08
3605 4232 7.176690 CACAAAACCACCTTGATTAGATACCTT 59.823 37.037 0.00 0.00 0.00 3.50
3606 4233 7.176690 ACAAAACCACCTTGATTAGATACCTTG 59.823 37.037 0.00 0.00 0.00 3.61
3607 4234 6.388619 AACCACCTTGATTAGATACCTTGT 57.611 37.500 0.00 0.00 0.00 3.16
3608 4235 5.990668 ACCACCTTGATTAGATACCTTGTC 58.009 41.667 0.00 0.00 0.00 3.18
3609 4236 5.487488 ACCACCTTGATTAGATACCTTGTCA 59.513 40.000 0.00 0.00 0.00 3.58
3610 4237 6.012858 ACCACCTTGATTAGATACCTTGTCAA 60.013 38.462 0.00 0.00 0.00 3.18
3611 4238 6.540189 CCACCTTGATTAGATACCTTGTCAAG 59.460 42.308 5.53 5.53 39.61 3.02
3612 4239 7.331026 CACCTTGATTAGATACCTTGTCAAGA 58.669 38.462 14.42 0.00 40.85 3.02
3613 4240 7.824289 CACCTTGATTAGATACCTTGTCAAGAA 59.176 37.037 14.42 2.26 40.85 2.52
3614 4241 8.383175 ACCTTGATTAGATACCTTGTCAAGAAA 58.617 33.333 14.42 1.89 40.85 2.52
3615 4242 9.231297 CCTTGATTAGATACCTTGTCAAGAAAA 57.769 33.333 14.42 0.00 40.85 2.29
3618 4245 7.336931 TGATTAGATACCTTGTCAAGAAAAGGC 59.663 37.037 17.12 3.56 45.82 4.35
3619 4246 5.248380 AGATACCTTGTCAAGAAAAGGCT 57.752 39.130 17.12 6.67 45.82 4.58
3620 4247 6.374417 AGATACCTTGTCAAGAAAAGGCTA 57.626 37.500 17.12 10.14 45.82 3.93
3621 4248 6.410540 AGATACCTTGTCAAGAAAAGGCTAG 58.589 40.000 17.12 0.00 45.82 3.42
3622 4249 3.149981 ACCTTGTCAAGAAAAGGCTAGC 58.850 45.455 17.12 6.04 45.82 3.42
3623 4250 3.181439 ACCTTGTCAAGAAAAGGCTAGCT 60.181 43.478 17.12 0.00 45.82 3.32
3624 4251 3.823304 CCTTGTCAAGAAAAGGCTAGCTT 59.177 43.478 15.72 3.40 36.78 3.74
4111 4753 5.236911 GTCACTCTAGTTAGTACTCCATCCG 59.763 48.000 0.00 0.00 35.78 4.18
4307 5402 3.508793 ACTCCAATGAGCAACAGGAAATG 59.491 43.478 0.00 0.00 42.74 2.32
4385 5480 4.229876 GCAAGAAGCCATCACACTTAAAC 58.770 43.478 0.00 0.00 37.23 2.01
4458 5554 7.609532 CCAGAAAAGATTCTTCCAGTAGACATT 59.390 37.037 0.00 0.00 43.43 2.71
4910 6343 9.440773 CTGTTACATACATGAGCACCATTATAT 57.559 33.333 0.00 0.00 35.85 0.86
4927 6360 9.085645 ACCATTATATCGTTGTGATCCTAGTTA 57.914 33.333 0.00 0.00 38.57 2.24
5060 6545 9.559958 CCTGCTTTAAATTATAACTCACTTGTG 57.440 33.333 0.00 0.00 0.00 3.33
5592 7114 3.927142 CGATTCACACAACTAAGGGACTC 59.073 47.826 0.00 0.00 38.49 3.36
6020 7543 3.722728 AAGGCACTGCTTTTTCTTCAG 57.277 42.857 0.00 0.00 40.86 3.02
6023 7546 3.317430 AGGCACTGCTTTTTCTTCAGAAG 59.683 43.478 3.45 3.45 37.18 2.85
6041 7565 3.453717 AGAAGATGAAGTGCTCATAGGCA 59.546 43.478 0.00 0.00 45.23 4.75
6042 7566 4.102838 AGAAGATGAAGTGCTCATAGGCAT 59.897 41.667 0.00 0.00 45.23 4.40
6051 7577 5.090139 AGTGCTCATAGGCATATAGTCCTT 58.910 41.667 0.00 0.00 44.34 3.36
6064 7590 2.918712 AGTCCTTGTCTGTTGAGTGG 57.081 50.000 0.00 0.00 0.00 4.00
6068 7594 2.703536 TCCTTGTCTGTTGAGTGGCTAA 59.296 45.455 0.00 0.00 0.00 3.09
6477 8004 5.007724 GCTTATTTTTGCGATACAGGCTACT 59.992 40.000 0.00 0.00 0.00 2.57
6540 8070 2.673862 CCGCGGACACACATATTTACAA 59.326 45.455 24.07 0.00 0.00 2.41
6541 8071 3.125487 CCGCGGACACACATATTTACAAA 59.875 43.478 24.07 0.00 0.00 2.83
6574 8104 1.225426 GGCATGGACTCCTGCATCA 59.775 57.895 16.63 0.00 40.18 3.07
6733 8264 2.606378 ACTCCCTCCGTCCCATAATAC 58.394 52.381 0.00 0.00 0.00 1.89
6749 8281 6.021596 CCATAATACAAGAGCGTTTTGACAC 58.978 40.000 5.15 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.822561 ACCAACATGACAACACAACACA 59.177 40.909 0.00 0.00 0.00 3.72
3 4 3.256879 ACAACCAACATGACAACACAACA 59.743 39.130 0.00 0.00 0.00 3.33
4 5 3.843999 ACAACCAACATGACAACACAAC 58.156 40.909 0.00 0.00 0.00 3.32
6 7 4.097135 CCTTACAACCAACATGACAACACA 59.903 41.667 0.00 0.00 0.00 3.72
7 8 4.499019 CCCTTACAACCAACATGACAACAC 60.499 45.833 0.00 0.00 0.00 3.32
8 9 3.634448 CCCTTACAACCAACATGACAACA 59.366 43.478 0.00 0.00 0.00 3.33
9 10 3.552068 GCCCTTACAACCAACATGACAAC 60.552 47.826 0.00 0.00 0.00 3.32
10 11 2.625790 GCCCTTACAACCAACATGACAA 59.374 45.455 0.00 0.00 0.00 3.18
11 12 2.158534 AGCCCTTACAACCAACATGACA 60.159 45.455 0.00 0.00 0.00 3.58
12 13 2.514803 AGCCCTTACAACCAACATGAC 58.485 47.619 0.00 0.00 0.00 3.06
13 14 2.969821 AGCCCTTACAACCAACATGA 57.030 45.000 0.00 0.00 0.00 3.07
15 16 3.237268 TGAAGCCCTTACAACCAACAT 57.763 42.857 0.00 0.00 0.00 2.71
16 17 2.738587 TGAAGCCCTTACAACCAACA 57.261 45.000 0.00 0.00 0.00 3.33
17 18 5.715434 TTAATGAAGCCCTTACAACCAAC 57.285 39.130 0.00 0.00 0.00 3.77
18 19 6.926630 AATTAATGAAGCCCTTACAACCAA 57.073 33.333 0.00 0.00 0.00 3.67
19 20 6.926630 AAATTAATGAAGCCCTTACAACCA 57.073 33.333 0.00 0.00 0.00 3.67
20 21 9.713713 TTTTAAATTAATGAAGCCCTTACAACC 57.286 29.630 0.00 0.00 0.00 3.77
26 27 9.875691 GTCTGATTTTAAATTAATGAAGCCCTT 57.124 29.630 0.00 0.00 0.00 3.95
27 28 9.034800 TGTCTGATTTTAAATTAATGAAGCCCT 57.965 29.630 0.00 0.00 0.00 5.19
28 29 9.087424 GTGTCTGATTTTAAATTAATGAAGCCC 57.913 33.333 0.00 0.00 0.00 5.19
29 30 9.638239 TGTGTCTGATTTTAAATTAATGAAGCC 57.362 29.630 0.00 0.00 0.00 4.35
40 41 9.528018 GAAATGAGGTTTGTGTCTGATTTTAAA 57.472 29.630 0.00 0.00 29.51 1.52
41 42 8.912988 AGAAATGAGGTTTGTGTCTGATTTTAA 58.087 29.630 0.00 0.00 29.51 1.52
42 43 8.463930 AGAAATGAGGTTTGTGTCTGATTTTA 57.536 30.769 0.00 0.00 29.51 1.52
43 44 7.352079 AGAAATGAGGTTTGTGTCTGATTTT 57.648 32.000 0.00 0.00 29.51 1.82
44 45 6.966534 AGAAATGAGGTTTGTGTCTGATTT 57.033 33.333 0.00 0.00 31.42 2.17
45 46 8.463930 TTTAGAAATGAGGTTTGTGTCTGATT 57.536 30.769 0.00 0.00 0.00 2.57
46 47 8.463930 TTTTAGAAATGAGGTTTGTGTCTGAT 57.536 30.769 0.00 0.00 0.00 2.90
47 48 7.873719 TTTTAGAAATGAGGTTTGTGTCTGA 57.126 32.000 0.00 0.00 0.00 3.27
70 71 6.399639 AATGTGTTACATCCGGAACTTTTT 57.600 33.333 9.01 0.00 37.97 1.94
71 72 6.399639 AAATGTGTTACATCCGGAACTTTT 57.600 33.333 9.01 8.90 37.97 2.27
72 73 6.399639 AAAATGTGTTACATCCGGAACTTT 57.600 33.333 9.01 2.39 37.97 2.66
73 74 6.039941 TCAAAAATGTGTTACATCCGGAACTT 59.960 34.615 9.01 0.00 37.97 2.66
74 75 5.533154 TCAAAAATGTGTTACATCCGGAACT 59.467 36.000 9.01 0.00 37.97 3.01
75 76 5.764131 TCAAAAATGTGTTACATCCGGAAC 58.236 37.500 9.01 1.75 37.97 3.62
76 77 6.392625 TTCAAAAATGTGTTACATCCGGAA 57.607 33.333 9.01 0.00 37.97 4.30
77 78 6.432783 AGATTCAAAAATGTGTTACATCCGGA 59.567 34.615 6.61 6.61 37.97 5.14
78 79 6.620678 AGATTCAAAAATGTGTTACATCCGG 58.379 36.000 0.00 0.00 37.97 5.14
79 80 7.807433 TGAAGATTCAAAAATGTGTTACATCCG 59.193 33.333 0.00 0.00 34.11 4.18
80 81 9.132521 CTGAAGATTCAAAAATGTGTTACATCC 57.867 33.333 0.00 0.00 35.70 3.51
81 82 9.132521 CCTGAAGATTCAAAAATGTGTTACATC 57.867 33.333 0.00 0.00 35.70 3.06
82 83 8.859090 TCCTGAAGATTCAAAAATGTGTTACAT 58.141 29.630 0.00 0.00 37.28 2.29
83 84 8.231692 TCCTGAAGATTCAAAAATGTGTTACA 57.768 30.769 0.00 0.00 36.64 2.41
86 87 8.526147 CCTATCCTGAAGATTCAAAAATGTGTT 58.474 33.333 0.00 0.00 36.64 3.32
87 88 7.890127 TCCTATCCTGAAGATTCAAAAATGTGT 59.110 33.333 0.00 0.00 36.64 3.72
88 89 8.284945 TCCTATCCTGAAGATTCAAAAATGTG 57.715 34.615 0.00 0.00 36.64 3.21
89 90 7.559170 CCTCCTATCCTGAAGATTCAAAAATGT 59.441 37.037 0.00 0.00 36.64 2.71
90 91 7.014038 CCCTCCTATCCTGAAGATTCAAAAATG 59.986 40.741 0.00 0.00 36.64 2.32
91 92 7.065504 CCCTCCTATCCTGAAGATTCAAAAAT 58.934 38.462 0.00 0.00 36.64 1.82
92 93 6.217487 TCCCTCCTATCCTGAAGATTCAAAAA 59.783 38.462 0.00 0.00 36.64 1.94
93 94 5.731187 TCCCTCCTATCCTGAAGATTCAAAA 59.269 40.000 0.00 0.00 36.64 2.44
94 95 5.288687 TCCCTCCTATCCTGAAGATTCAAA 58.711 41.667 0.00 0.00 36.64 2.69
95 96 4.895836 TCCCTCCTATCCTGAAGATTCAA 58.104 43.478 0.00 0.00 36.64 2.69
96 97 4.078336 ACTCCCTCCTATCCTGAAGATTCA 60.078 45.833 0.00 0.00 36.33 2.57
97 98 4.488770 ACTCCCTCCTATCCTGAAGATTC 58.511 47.826 0.00 0.00 36.33 2.52
98 99 4.567987 ACTCCCTCCTATCCTGAAGATT 57.432 45.455 0.00 0.00 36.33 2.40
99 100 5.894715 ATACTCCCTCCTATCCTGAAGAT 57.105 43.478 0.00 0.00 39.15 2.40
100 101 5.688220 AATACTCCCTCCTATCCTGAAGA 57.312 43.478 0.00 0.00 0.00 2.87
101 102 6.957020 ACATAATACTCCCTCCTATCCTGAAG 59.043 42.308 0.00 0.00 0.00 3.02
102 103 6.875469 ACATAATACTCCCTCCTATCCTGAA 58.125 40.000 0.00 0.00 0.00 3.02
103 104 6.485388 ACATAATACTCCCTCCTATCCTGA 57.515 41.667 0.00 0.00 0.00 3.86
104 105 7.235606 TCAAACATAATACTCCCTCCTATCCTG 59.764 40.741 0.00 0.00 0.00 3.86
105 106 7.313731 TCAAACATAATACTCCCTCCTATCCT 58.686 38.462 0.00 0.00 0.00 3.24
106 107 7.310734 CCTCAAACATAATACTCCCTCCTATCC 60.311 44.444 0.00 0.00 0.00 2.59
107 108 7.235812 ACCTCAAACATAATACTCCCTCCTATC 59.764 40.741 0.00 0.00 0.00 2.08
108 109 7.016661 CACCTCAAACATAATACTCCCTCCTAT 59.983 40.741 0.00 0.00 0.00 2.57
109 110 6.326583 CACCTCAAACATAATACTCCCTCCTA 59.673 42.308 0.00 0.00 0.00 2.94
110 111 5.131142 CACCTCAAACATAATACTCCCTCCT 59.869 44.000 0.00 0.00 0.00 3.69
111 112 5.130477 TCACCTCAAACATAATACTCCCTCC 59.870 44.000 0.00 0.00 0.00 4.30
112 113 6.235231 TCACCTCAAACATAATACTCCCTC 57.765 41.667 0.00 0.00 0.00 4.30
113 114 6.831664 ATCACCTCAAACATAATACTCCCT 57.168 37.500 0.00 0.00 0.00 4.20
114 115 7.881775 AAATCACCTCAAACATAATACTCCC 57.118 36.000 0.00 0.00 0.00 4.30
115 116 8.739972 ACAAAATCACCTCAAACATAATACTCC 58.260 33.333 0.00 0.00 0.00 3.85
146 147 5.828299 AGATCGATATTTTCCCGCAAAAA 57.172 34.783 0.00 0.00 37.52 1.94
147 148 7.227711 TGAATAGATCGATATTTTCCCGCAAAA 59.772 33.333 16.99 0.00 38.38 2.44
148 149 6.708502 TGAATAGATCGATATTTTCCCGCAAA 59.291 34.615 16.99 0.00 0.00 3.68
149 150 6.147164 GTGAATAGATCGATATTTTCCCGCAA 59.853 38.462 16.99 0.14 0.00 4.85
150 151 5.637810 GTGAATAGATCGATATTTTCCCGCA 59.362 40.000 16.99 0.99 0.00 5.69
151 152 5.063564 GGTGAATAGATCGATATTTTCCCGC 59.936 44.000 16.99 9.49 0.00 6.13
152 153 6.398918 AGGTGAATAGATCGATATTTTCCCG 58.601 40.000 16.99 0.00 0.00 5.14
153 154 7.878127 TGAAGGTGAATAGATCGATATTTTCCC 59.122 37.037 16.99 16.37 0.00 3.97
154 155 8.833231 TGAAGGTGAATAGATCGATATTTTCC 57.167 34.615 16.99 11.53 0.00 3.13
159 160 9.597170 CATGATTGAAGGTGAATAGATCGATAT 57.403 33.333 0.00 0.00 0.00 1.63
160 161 8.037166 CCATGATTGAAGGTGAATAGATCGATA 58.963 37.037 0.00 0.00 0.00 2.92
161 162 6.877855 CCATGATTGAAGGTGAATAGATCGAT 59.122 38.462 0.00 0.00 0.00 3.59
162 163 6.041979 TCCATGATTGAAGGTGAATAGATCGA 59.958 38.462 0.00 0.00 0.00 3.59
163 164 6.226052 TCCATGATTGAAGGTGAATAGATCG 58.774 40.000 0.00 0.00 0.00 3.69
164 165 7.718753 ACTTCCATGATTGAAGGTGAATAGATC 59.281 37.037 10.52 0.00 42.79 2.75
165 166 7.580910 ACTTCCATGATTGAAGGTGAATAGAT 58.419 34.615 10.52 0.00 42.79 1.98
166 167 6.962182 ACTTCCATGATTGAAGGTGAATAGA 58.038 36.000 10.52 0.00 42.79 1.98
167 168 7.770433 TGTACTTCCATGATTGAAGGTGAATAG 59.230 37.037 10.52 0.00 42.79 1.73
168 169 7.629157 TGTACTTCCATGATTGAAGGTGAATA 58.371 34.615 10.52 0.00 42.79 1.75
169 170 6.484288 TGTACTTCCATGATTGAAGGTGAAT 58.516 36.000 10.52 0.00 42.79 2.57
170 171 5.875224 TGTACTTCCATGATTGAAGGTGAA 58.125 37.500 10.52 0.00 42.79 3.18
171 172 5.497464 TGTACTTCCATGATTGAAGGTGA 57.503 39.130 10.52 0.00 42.79 4.02
172 173 5.390885 CGTTGTACTTCCATGATTGAAGGTG 60.391 44.000 10.52 0.00 42.79 4.00
173 174 4.695455 CGTTGTACTTCCATGATTGAAGGT 59.305 41.667 10.52 0.52 42.79 3.50
174 175 4.935205 TCGTTGTACTTCCATGATTGAAGG 59.065 41.667 10.52 0.00 42.79 3.46
175 176 6.073276 TGTTCGTTGTACTTCCATGATTGAAG 60.073 38.462 4.86 4.86 43.82 3.02
176 177 5.760743 TGTTCGTTGTACTTCCATGATTGAA 59.239 36.000 0.00 0.00 0.00 2.69
177 178 5.178623 GTGTTCGTTGTACTTCCATGATTGA 59.821 40.000 0.00 0.00 0.00 2.57
178 179 5.179368 AGTGTTCGTTGTACTTCCATGATTG 59.821 40.000 0.00 0.00 0.00 2.67
179 180 5.305585 AGTGTTCGTTGTACTTCCATGATT 58.694 37.500 0.00 0.00 0.00 2.57
180 181 4.894784 AGTGTTCGTTGTACTTCCATGAT 58.105 39.130 0.00 0.00 0.00 2.45
181 182 4.330944 AGTGTTCGTTGTACTTCCATGA 57.669 40.909 0.00 0.00 0.00 3.07
182 183 5.466819 TCTAGTGTTCGTTGTACTTCCATG 58.533 41.667 0.00 0.00 0.00 3.66
183 184 5.717078 TCTAGTGTTCGTTGTACTTCCAT 57.283 39.130 0.00 0.00 0.00 3.41
184 185 5.518848 TTCTAGTGTTCGTTGTACTTCCA 57.481 39.130 0.00 0.00 0.00 3.53
185 186 7.811713 AGTATTTCTAGTGTTCGTTGTACTTCC 59.188 37.037 0.00 0.00 0.00 3.46
186 187 8.739649 AGTATTTCTAGTGTTCGTTGTACTTC 57.260 34.615 0.00 0.00 0.00 3.01
191 192 9.538508 ACTTTTAGTATTTCTAGTGTTCGTTGT 57.461 29.630 0.00 0.00 0.00 3.32
264 265 9.693739 TGAGCTTCCACCTATTAATATTTTTGA 57.306 29.630 0.00 0.00 0.00 2.69
265 266 9.956720 CTGAGCTTCCACCTATTAATATTTTTG 57.043 33.333 0.00 0.00 0.00 2.44
266 267 9.920946 TCTGAGCTTCCACCTATTAATATTTTT 57.079 29.630 0.00 0.00 0.00 1.94
267 268 9.920946 TTCTGAGCTTCCACCTATTAATATTTT 57.079 29.630 0.00 0.00 0.00 1.82
268 269 9.566432 CTTCTGAGCTTCCACCTATTAATATTT 57.434 33.333 0.00 0.00 0.00 1.40
269 270 8.938883 TCTTCTGAGCTTCCACCTATTAATATT 58.061 33.333 0.00 0.00 0.00 1.28
270 271 8.497910 TCTTCTGAGCTTCCACCTATTAATAT 57.502 34.615 0.00 0.00 0.00 1.28
271 272 7.914427 TCTTCTGAGCTTCCACCTATTAATA 57.086 36.000 0.00 0.00 0.00 0.98
272 273 6.814954 TCTTCTGAGCTTCCACCTATTAAT 57.185 37.500 0.00 0.00 0.00 1.40
273 274 6.620877 TTCTTCTGAGCTTCCACCTATTAA 57.379 37.500 0.00 0.00 0.00 1.40
274 275 6.814954 ATTCTTCTGAGCTTCCACCTATTA 57.185 37.500 0.00 0.00 0.00 0.98
275 276 5.707066 ATTCTTCTGAGCTTCCACCTATT 57.293 39.130 0.00 0.00 0.00 1.73
276 277 8.677870 ATATATTCTTCTGAGCTTCCACCTAT 57.322 34.615 0.00 0.00 0.00 2.57
277 278 8.497910 AATATATTCTTCTGAGCTTCCACCTA 57.502 34.615 0.00 0.00 0.00 3.08
278 279 7.385894 AATATATTCTTCTGAGCTTCCACCT 57.614 36.000 0.00 0.00 0.00 4.00
279 280 9.732130 ATTAATATATTCTTCTGAGCTTCCACC 57.268 33.333 0.00 0.00 0.00 4.61
310 311 4.171005 CACATAGGCGTACTCTCGAAAAA 58.829 43.478 0.00 0.00 0.00 1.94
311 312 3.192001 ACACATAGGCGTACTCTCGAAAA 59.808 43.478 0.00 0.00 0.00 2.29
312 313 2.751259 ACACATAGGCGTACTCTCGAAA 59.249 45.455 0.00 0.00 0.00 3.46
313 314 2.362736 ACACATAGGCGTACTCTCGAA 58.637 47.619 0.00 0.00 0.00 3.71
314 315 2.034104 ACACATAGGCGTACTCTCGA 57.966 50.000 0.00 0.00 0.00 4.04
315 316 3.497262 TGATACACATAGGCGTACTCTCG 59.503 47.826 0.00 0.00 0.00 4.04
316 317 5.630661 ATGATACACATAGGCGTACTCTC 57.369 43.478 0.00 0.00 37.46 3.20
341 342 8.237267 ACAGTTCAAATTCCGCTTTCTATAAAG 58.763 33.333 0.00 0.00 44.21 1.85
342 343 8.106247 ACAGTTCAAATTCCGCTTTCTATAAA 57.894 30.769 0.00 0.00 0.00 1.40
343 344 7.681939 ACAGTTCAAATTCCGCTTTCTATAA 57.318 32.000 0.00 0.00 0.00 0.98
344 345 8.780846 TTACAGTTCAAATTCCGCTTTCTATA 57.219 30.769 0.00 0.00 0.00 1.31
345 346 7.606456 TCTTACAGTTCAAATTCCGCTTTCTAT 59.394 33.333 0.00 0.00 0.00 1.98
346 347 6.932400 TCTTACAGTTCAAATTCCGCTTTCTA 59.068 34.615 0.00 0.00 0.00 2.10
347 348 5.763204 TCTTACAGTTCAAATTCCGCTTTCT 59.237 36.000 0.00 0.00 0.00 2.52
348 349 5.997385 TCTTACAGTTCAAATTCCGCTTTC 58.003 37.500 0.00 0.00 0.00 2.62
349 350 6.183360 TGTTCTTACAGTTCAAATTCCGCTTT 60.183 34.615 0.00 0.00 0.00 3.51
350 351 5.298276 TGTTCTTACAGTTCAAATTCCGCTT 59.702 36.000 0.00 0.00 0.00 4.68
351 352 4.819630 TGTTCTTACAGTTCAAATTCCGCT 59.180 37.500 0.00 0.00 0.00 5.52
352 353 5.103290 TGTTCTTACAGTTCAAATTCCGC 57.897 39.130 0.00 0.00 0.00 5.54
353 354 9.113876 GTTAATGTTCTTACAGTTCAAATTCCG 57.886 33.333 0.00 0.00 37.77 4.30
354 355 9.959749 TGTTAATGTTCTTACAGTTCAAATTCC 57.040 29.630 0.00 0.00 37.77 3.01
358 359 8.332464 CGAGTGTTAATGTTCTTACAGTTCAAA 58.668 33.333 0.00 0.00 37.77 2.69
359 360 7.517734 GCGAGTGTTAATGTTCTTACAGTTCAA 60.518 37.037 0.00 0.00 37.77 2.69
360 361 6.073980 GCGAGTGTTAATGTTCTTACAGTTCA 60.074 38.462 0.00 0.00 37.77 3.18
361 362 6.145696 AGCGAGTGTTAATGTTCTTACAGTTC 59.854 38.462 0.00 0.00 37.77 3.01
362 363 5.989777 AGCGAGTGTTAATGTTCTTACAGTT 59.010 36.000 0.00 0.00 37.77 3.16
363 364 5.539048 AGCGAGTGTTAATGTTCTTACAGT 58.461 37.500 0.00 0.00 37.77 3.55
364 365 6.237227 CGTAGCGAGTGTTAATGTTCTTACAG 60.237 42.308 0.00 0.00 37.77 2.74
365 366 5.570206 CGTAGCGAGTGTTAATGTTCTTACA 59.430 40.000 0.00 0.00 38.95 2.41
366 367 5.796935 TCGTAGCGAGTGTTAATGTTCTTAC 59.203 40.000 0.00 0.00 0.00 2.34
367 368 5.941733 TCGTAGCGAGTGTTAATGTTCTTA 58.058 37.500 0.00 0.00 0.00 2.10
368 369 4.801891 TCGTAGCGAGTGTTAATGTTCTT 58.198 39.130 0.00 0.00 0.00 2.52
369 370 4.430137 TCGTAGCGAGTGTTAATGTTCT 57.570 40.909 0.00 0.00 0.00 3.01
370 371 4.383649 TGTTCGTAGCGAGTGTTAATGTTC 59.616 41.667 0.00 0.00 37.14 3.18
371 372 4.300803 TGTTCGTAGCGAGTGTTAATGTT 58.699 39.130 0.00 0.00 37.14 2.71
372 373 3.904571 TGTTCGTAGCGAGTGTTAATGT 58.095 40.909 0.00 0.00 37.14 2.71
373 374 4.625135 GTTGTTCGTAGCGAGTGTTAATG 58.375 43.478 0.00 0.00 37.14 1.90
374 375 3.362831 CGTTGTTCGTAGCGAGTGTTAAT 59.637 43.478 0.00 0.00 37.14 1.40
375 376 2.720578 CGTTGTTCGTAGCGAGTGTTAA 59.279 45.455 0.00 0.00 37.14 2.01
376 377 2.032117 TCGTTGTTCGTAGCGAGTGTTA 60.032 45.455 0.00 0.00 37.14 2.41
377 378 1.126079 CGTTGTTCGTAGCGAGTGTT 58.874 50.000 0.00 0.00 37.14 3.32
378 379 0.308684 TCGTTGTTCGTAGCGAGTGT 59.691 50.000 0.00 0.00 37.14 3.55
379 380 0.975544 CTCGTTGTTCGTAGCGAGTG 59.024 55.000 12.28 0.00 43.50 3.51
380 381 3.379682 CTCGTTGTTCGTAGCGAGT 57.620 52.632 12.28 0.00 43.50 4.18
382 383 4.141883 GCTCGTTGTTCGTAGCGA 57.858 55.556 0.00 0.00 40.80 4.93
384 385 0.905839 CTACGCTCGTTGTTCGTAGC 59.094 55.000 0.00 0.00 45.61 3.58
386 387 0.238025 TGCTACGCTCGTTGTTCGTA 59.762 50.000 0.00 0.00 40.80 3.43
387 388 0.595567 TTGCTACGCTCGTTGTTCGT 60.596 50.000 0.00 0.00 40.80 3.85
388 389 0.091344 CTTGCTACGCTCGTTGTTCG 59.909 55.000 0.00 0.00 41.41 3.95
389 390 1.415374 TCTTGCTACGCTCGTTGTTC 58.585 50.000 0.00 0.00 0.00 3.18
390 391 1.525619 GTTCTTGCTACGCTCGTTGTT 59.474 47.619 0.00 0.00 0.00 2.83
391 392 1.137513 GTTCTTGCTACGCTCGTTGT 58.862 50.000 0.00 0.00 0.00 3.32
392 393 1.136611 GTGTTCTTGCTACGCTCGTTG 60.137 52.381 0.00 0.00 0.00 4.10
393 394 1.137513 GTGTTCTTGCTACGCTCGTT 58.862 50.000 0.00 0.00 0.00 3.85
394 395 0.666577 GGTGTTCTTGCTACGCTCGT 60.667 55.000 0.00 0.00 0.00 4.18
395 396 0.666274 TGGTGTTCTTGCTACGCTCG 60.666 55.000 0.00 0.00 0.00 5.03
396 397 0.790814 GTGGTGTTCTTGCTACGCTC 59.209 55.000 0.00 0.00 0.00 5.03
397 398 0.105964 TGTGGTGTTCTTGCTACGCT 59.894 50.000 0.00 0.00 0.00 5.07
398 399 0.234884 GTGTGGTGTTCTTGCTACGC 59.765 55.000 0.00 0.00 0.00 4.42
399 400 0.865769 GGTGTGGTGTTCTTGCTACG 59.134 55.000 0.00 0.00 0.00 3.51
400 401 1.602377 GTGGTGTGGTGTTCTTGCTAC 59.398 52.381 0.00 0.00 0.00 3.58
401 402 1.210722 TGTGGTGTGGTGTTCTTGCTA 59.789 47.619 0.00 0.00 0.00 3.49
402 403 0.034574 TGTGGTGTGGTGTTCTTGCT 60.035 50.000 0.00 0.00 0.00 3.91
403 404 0.100503 GTGTGGTGTGGTGTTCTTGC 59.899 55.000 0.00 0.00 0.00 4.01
404 405 0.738389 GGTGTGGTGTGGTGTTCTTG 59.262 55.000 0.00 0.00 0.00 3.02
405 406 0.395173 GGGTGTGGTGTGGTGTTCTT 60.395 55.000 0.00 0.00 0.00 2.52
406 407 1.226262 GGGTGTGGTGTGGTGTTCT 59.774 57.895 0.00 0.00 0.00 3.01
407 408 2.184167 CGGGTGTGGTGTGGTGTTC 61.184 63.158 0.00 0.00 0.00 3.18
408 409 2.124487 CGGGTGTGGTGTGGTGTT 60.124 61.111 0.00 0.00 0.00 3.32
409 410 4.183858 CCGGGTGTGGTGTGGTGT 62.184 66.667 0.00 0.00 0.00 4.16
410 411 4.947147 CCCGGGTGTGGTGTGGTG 62.947 72.222 14.18 0.00 0.00 4.17
413 414 4.885270 TTGCCCGGGTGTGGTGTG 62.885 66.667 24.63 0.00 0.00 3.82
414 415 4.579384 CTTGCCCGGGTGTGGTGT 62.579 66.667 24.63 0.00 0.00 4.16
415 416 4.579384 ACTTGCCCGGGTGTGGTG 62.579 66.667 24.63 9.29 0.00 4.17
416 417 4.265056 GACTTGCCCGGGTGTGGT 62.265 66.667 24.63 15.82 0.00 4.16
418 419 4.263572 TGGACTTGCCCGGGTGTG 62.264 66.667 24.63 14.51 34.97 3.82
419 420 4.265056 GTGGACTTGCCCGGGTGT 62.265 66.667 24.63 18.59 34.97 4.16
420 421 3.953775 AGTGGACTTGCCCGGGTG 61.954 66.667 24.63 15.28 34.97 4.61
421 422 3.953775 CAGTGGACTTGCCCGGGT 61.954 66.667 24.63 0.09 34.97 5.28
422 423 3.636231 TCAGTGGACTTGCCCGGG 61.636 66.667 19.09 19.09 34.97 5.73
423 424 2.358737 GTCAGTGGACTTGCCCGG 60.359 66.667 0.00 0.00 40.99 5.73
424 425 1.669115 CTGTCAGTGGACTTGCCCG 60.669 63.158 0.00 0.00 44.61 6.13
425 426 1.968540 GCTGTCAGTGGACTTGCCC 60.969 63.158 0.93 0.00 44.61 5.36
426 427 3.660621 GCTGTCAGTGGACTTGCC 58.339 61.111 0.93 0.00 44.61 4.52
427 428 0.607489 ATGGCTGTCAGTGGACTTGC 60.607 55.000 0.93 0.00 44.61 4.01
428 429 1.446907 GATGGCTGTCAGTGGACTTG 58.553 55.000 0.93 0.00 44.61 3.16
429 430 0.036952 CGATGGCTGTCAGTGGACTT 60.037 55.000 0.93 0.00 44.61 3.01
430 431 0.900182 TCGATGGCTGTCAGTGGACT 60.900 55.000 0.93 0.00 44.61 3.85
431 432 0.176680 ATCGATGGCTGTCAGTGGAC 59.823 55.000 0.00 0.00 44.57 4.02
432 433 0.176449 CATCGATGGCTGTCAGTGGA 59.824 55.000 17.96 0.00 0.00 4.02
433 434 0.176449 TCATCGATGGCTGTCAGTGG 59.824 55.000 24.61 0.00 0.00 4.00
434 435 1.284657 GTCATCGATGGCTGTCAGTG 58.715 55.000 22.52 0.00 0.00 3.66
435 436 0.176680 GGTCATCGATGGCTGTCAGT 59.823 55.000 27.71 0.00 31.84 3.41
436 437 0.176449 TGGTCATCGATGGCTGTCAG 59.824 55.000 27.71 0.00 31.84 3.51
437 438 0.612744 TTGGTCATCGATGGCTGTCA 59.387 50.000 27.71 15.64 31.84 3.58
438 439 1.398390 GTTTGGTCATCGATGGCTGTC 59.602 52.381 27.71 13.21 31.84 3.51
439 440 1.271325 TGTTTGGTCATCGATGGCTGT 60.271 47.619 27.71 0.00 31.84 4.40
440 441 1.452110 TGTTTGGTCATCGATGGCTG 58.548 50.000 27.71 3.47 31.84 4.85
441 442 2.198827 TTGTTTGGTCATCGATGGCT 57.801 45.000 27.71 0.00 31.84 4.75
442 443 2.986479 GTTTTGTTTGGTCATCGATGGC 59.014 45.455 24.61 23.24 0.00 4.40
443 444 4.503741 AGTTTTGTTTGGTCATCGATGG 57.496 40.909 24.61 7.01 0.00 3.51
444 445 5.996219 TGTAGTTTTGTTTGGTCATCGATG 58.004 37.500 19.61 19.61 0.00 3.84
445 446 6.627395 TTGTAGTTTTGTTTGGTCATCGAT 57.373 33.333 0.00 0.00 0.00 3.59
446 447 5.504994 GCTTGTAGTTTTGTTTGGTCATCGA 60.505 40.000 0.00 0.00 0.00 3.59
447 448 4.675114 GCTTGTAGTTTTGTTTGGTCATCG 59.325 41.667 0.00 0.00 0.00 3.84
448 449 5.587289 TGCTTGTAGTTTTGTTTGGTCATC 58.413 37.500 0.00 0.00 0.00 2.92
449 450 5.590530 TGCTTGTAGTTTTGTTTGGTCAT 57.409 34.783 0.00 0.00 0.00 3.06
450 451 5.392767 TTGCTTGTAGTTTTGTTTGGTCA 57.607 34.783 0.00 0.00 0.00 4.02
451 452 6.902224 ATTTGCTTGTAGTTTTGTTTGGTC 57.098 33.333 0.00 0.00 0.00 4.02
452 453 7.552459 ACTATTTGCTTGTAGTTTTGTTTGGT 58.448 30.769 0.00 0.00 0.00 3.67
453 454 7.920682 AGACTATTTGCTTGTAGTTTTGTTTGG 59.079 33.333 0.00 0.00 31.61 3.28
454 455 8.745837 CAGACTATTTGCTTGTAGTTTTGTTTG 58.254 33.333 0.00 0.00 31.61 2.93
455 456 7.920682 CCAGACTATTTGCTTGTAGTTTTGTTT 59.079 33.333 0.00 0.00 31.61 2.83
456 457 7.425606 CCAGACTATTTGCTTGTAGTTTTGTT 58.574 34.615 0.00 0.00 31.61 2.83
457 458 6.515035 GCCAGACTATTTGCTTGTAGTTTTGT 60.515 38.462 0.00 0.00 31.61 2.83
458 459 5.858581 GCCAGACTATTTGCTTGTAGTTTTG 59.141 40.000 0.00 0.00 31.61 2.44
459 460 5.048013 GGCCAGACTATTTGCTTGTAGTTTT 60.048 40.000 0.00 0.00 31.61 2.43
460 461 4.459337 GGCCAGACTATTTGCTTGTAGTTT 59.541 41.667 0.00 0.00 31.61 2.66
461 462 4.010349 GGCCAGACTATTTGCTTGTAGTT 58.990 43.478 0.00 0.00 31.61 2.24
462 463 3.264450 AGGCCAGACTATTTGCTTGTAGT 59.736 43.478 5.01 0.00 34.02 2.73
463 464 3.878778 AGGCCAGACTATTTGCTTGTAG 58.121 45.455 5.01 0.00 0.00 2.74
464 465 5.045869 AGTTAGGCCAGACTATTTGCTTGTA 60.046 40.000 5.01 0.00 0.00 2.41
465 466 2.887151 AGGCCAGACTATTTGCTTGT 57.113 45.000 5.01 0.00 0.00 3.16
466 467 4.095483 CAGTTAGGCCAGACTATTTGCTTG 59.905 45.833 5.01 0.00 0.00 4.01
467 468 4.019321 TCAGTTAGGCCAGACTATTTGCTT 60.019 41.667 5.01 0.00 0.00 3.91
468 469 3.519510 TCAGTTAGGCCAGACTATTTGCT 59.480 43.478 5.01 0.00 0.00 3.91
469 470 3.873910 TCAGTTAGGCCAGACTATTTGC 58.126 45.455 5.01 0.00 0.00 3.68
470 471 5.344743 TCTCAGTTAGGCCAGACTATTTG 57.655 43.478 5.01 0.00 0.00 2.32
471 472 5.248477 TGTTCTCAGTTAGGCCAGACTATTT 59.752 40.000 5.01 0.00 0.00 1.40
472 473 4.777896 TGTTCTCAGTTAGGCCAGACTATT 59.222 41.667 5.01 0.00 0.00 1.73
473 474 4.353777 TGTTCTCAGTTAGGCCAGACTAT 58.646 43.478 5.01 0.00 0.00 2.12
474 475 3.774734 TGTTCTCAGTTAGGCCAGACTA 58.225 45.455 5.01 0.00 0.00 2.59
475 476 2.609747 TGTTCTCAGTTAGGCCAGACT 58.390 47.619 5.01 5.17 0.00 3.24
476 477 3.067833 GTTGTTCTCAGTTAGGCCAGAC 58.932 50.000 5.01 2.31 0.00 3.51
477 478 2.703536 TGTTGTTCTCAGTTAGGCCAGA 59.296 45.455 5.01 0.00 0.00 3.86
478 479 2.808543 GTGTTGTTCTCAGTTAGGCCAG 59.191 50.000 5.01 0.00 0.00 4.85
479 480 2.486548 GGTGTTGTTCTCAGTTAGGCCA 60.487 50.000 5.01 0.00 0.00 5.36
480 481 2.152016 GGTGTTGTTCTCAGTTAGGCC 58.848 52.381 0.00 0.00 0.00 5.19
481 482 1.798813 CGGTGTTGTTCTCAGTTAGGC 59.201 52.381 0.00 0.00 0.00 3.93
482 483 1.798813 GCGGTGTTGTTCTCAGTTAGG 59.201 52.381 0.00 0.00 0.00 2.69
483 484 2.479837 TGCGGTGTTGTTCTCAGTTAG 58.520 47.619 0.00 0.00 0.00 2.34
484 485 2.605837 TGCGGTGTTGTTCTCAGTTA 57.394 45.000 0.00 0.00 0.00 2.24
485 486 1.873591 GATGCGGTGTTGTTCTCAGTT 59.126 47.619 0.00 0.00 0.00 3.16
486 487 1.202639 TGATGCGGTGTTGTTCTCAGT 60.203 47.619 0.00 0.00 0.00 3.41
487 488 1.195448 GTGATGCGGTGTTGTTCTCAG 59.805 52.381 0.00 0.00 0.00 3.35
488 489 1.225855 GTGATGCGGTGTTGTTCTCA 58.774 50.000 0.00 0.00 0.00 3.27
489 490 0.163788 CGTGATGCGGTGTTGTTCTC 59.836 55.000 0.00 0.00 36.85 2.87
490 491 0.249699 TCGTGATGCGGTGTTGTTCT 60.250 50.000 0.00 0.00 41.72 3.01
491 492 0.110823 GTCGTGATGCGGTGTTGTTC 60.111 55.000 0.00 0.00 41.72 3.18
492 493 1.503818 GGTCGTGATGCGGTGTTGTT 61.504 55.000 0.00 0.00 41.72 2.83
493 494 1.959226 GGTCGTGATGCGGTGTTGT 60.959 57.895 0.00 0.00 41.72 3.32
494 495 1.502990 TTGGTCGTGATGCGGTGTTG 61.503 55.000 0.00 0.00 41.72 3.33
495 496 0.605319 ATTGGTCGTGATGCGGTGTT 60.605 50.000 0.00 0.00 41.72 3.32
496 497 1.003839 ATTGGTCGTGATGCGGTGT 60.004 52.632 0.00 0.00 41.72 4.16
497 498 1.298157 ACATTGGTCGTGATGCGGTG 61.298 55.000 0.00 0.00 41.72 4.94
498 499 1.003839 ACATTGGTCGTGATGCGGT 60.004 52.632 0.00 0.00 41.72 5.68
499 500 1.715585 GACATTGGTCGTGATGCGG 59.284 57.895 0.00 0.00 41.72 5.69
508 509 1.745489 GAGGTGCCCGACATTGGTC 60.745 63.158 0.00 0.00 40.77 4.02
509 510 2.351276 GAGGTGCCCGACATTGGT 59.649 61.111 0.00 0.00 0.00 3.67
510 511 2.438434 GGAGGTGCCCGACATTGG 60.438 66.667 0.00 0.00 0.00 3.16
518 519 3.319198 TGGTCTTCGGAGGTGCCC 61.319 66.667 0.00 0.00 0.00 5.36
519 520 2.047179 GTGGTCTTCGGAGGTGCC 60.047 66.667 0.00 0.00 0.00 5.01
520 521 1.070786 TTGTGGTCTTCGGAGGTGC 59.929 57.895 0.00 0.00 0.00 5.01
521 522 0.393077 AGTTGTGGTCTTCGGAGGTG 59.607 55.000 0.00 0.00 0.00 4.00
522 523 1.070289 GAAGTTGTGGTCTTCGGAGGT 59.930 52.381 0.00 0.00 33.30 3.85
523 524 1.344763 AGAAGTTGTGGTCTTCGGAGG 59.655 52.381 0.00 0.00 43.93 4.30
524 525 2.610727 GGAGAAGTTGTGGTCTTCGGAG 60.611 54.545 0.00 0.00 43.93 4.63
525 526 1.343465 GGAGAAGTTGTGGTCTTCGGA 59.657 52.381 0.00 0.00 43.93 4.55
526 527 1.344763 AGGAGAAGTTGTGGTCTTCGG 59.655 52.381 0.00 0.00 43.93 4.30
527 528 2.408050 CAGGAGAAGTTGTGGTCTTCG 58.592 52.381 0.00 0.00 43.93 3.79
528 529 2.368875 TCCAGGAGAAGTTGTGGTCTTC 59.631 50.000 0.00 0.00 40.83 2.87
529 530 2.104963 GTCCAGGAGAAGTTGTGGTCTT 59.895 50.000 0.00 0.00 0.00 3.01
530 531 1.694696 GTCCAGGAGAAGTTGTGGTCT 59.305 52.381 0.00 0.00 0.00 3.85
531 532 1.694696 AGTCCAGGAGAAGTTGTGGTC 59.305 52.381 0.00 0.00 0.00 4.02
532 533 1.807814 AGTCCAGGAGAAGTTGTGGT 58.192 50.000 0.00 0.00 0.00 4.16
533 534 2.880890 CAAAGTCCAGGAGAAGTTGTGG 59.119 50.000 0.00 0.00 0.00 4.17
534 535 2.291741 GCAAAGTCCAGGAGAAGTTGTG 59.708 50.000 0.00 0.00 0.00 3.33
535 536 2.173569 AGCAAAGTCCAGGAGAAGTTGT 59.826 45.455 0.00 0.00 0.00 3.32
536 537 2.810852 GAGCAAAGTCCAGGAGAAGTTG 59.189 50.000 0.00 0.00 0.00 3.16
537 538 2.548920 CGAGCAAAGTCCAGGAGAAGTT 60.549 50.000 0.00 0.00 0.00 2.66
538 539 1.001406 CGAGCAAAGTCCAGGAGAAGT 59.999 52.381 0.00 0.00 0.00 3.01
539 540 1.001406 ACGAGCAAAGTCCAGGAGAAG 59.999 52.381 0.00 0.00 0.00 2.85
540 541 1.000955 GACGAGCAAAGTCCAGGAGAA 59.999 52.381 0.00 0.00 32.78 2.87
541 542 0.603569 GACGAGCAAAGTCCAGGAGA 59.396 55.000 0.00 0.00 32.78 3.71
542 543 0.734253 CGACGAGCAAAGTCCAGGAG 60.734 60.000 0.00 0.00 35.33 3.69
543 544 1.176619 TCGACGAGCAAAGTCCAGGA 61.177 55.000 0.00 0.00 35.33 3.86
544 545 1.009389 GTCGACGAGCAAAGTCCAGG 61.009 60.000 0.00 0.00 35.33 4.45
545 546 1.337817 CGTCGACGAGCAAAGTCCAG 61.338 60.000 33.35 0.00 43.02 3.86
546 547 1.371267 CGTCGACGAGCAAAGTCCA 60.371 57.895 33.35 0.00 43.02 4.02
547 548 2.717809 GCGTCGACGAGCAAAGTCC 61.718 63.158 39.74 15.89 43.02 3.85
548 549 2.014554 TGCGTCGACGAGCAAAGTC 61.015 57.895 39.74 20.07 40.78 3.01
549 550 2.027024 TGCGTCGACGAGCAAAGT 59.973 55.556 39.74 0.00 40.78 2.66
550 551 2.465920 GTGCGTCGACGAGCAAAG 59.534 61.111 39.74 11.11 45.61 2.77
551 552 3.033764 GGTGCGTCGACGAGCAAA 61.034 61.111 39.74 16.69 45.61 3.68
552 553 2.202703 TATGGTGCGTCGACGAGCAA 62.203 55.000 39.74 24.32 45.61 3.91
553 554 2.692766 TATGGTGCGTCGACGAGCA 61.693 57.895 39.74 33.70 43.02 4.26
554 555 2.101575 TATGGTGCGTCGACGAGC 59.898 61.111 39.74 29.99 43.02 5.03
555 556 1.132199 GTGTATGGTGCGTCGACGAG 61.132 60.000 39.74 14.27 43.02 4.18
556 557 1.154169 GTGTATGGTGCGTCGACGA 60.154 57.895 39.74 22.22 43.02 4.20
557 558 2.156446 GGTGTATGGTGCGTCGACG 61.156 63.158 32.57 32.57 43.27 5.12
558 559 1.808390 GGGTGTATGGTGCGTCGAC 60.808 63.158 5.18 5.18 0.00 4.20
559 560 1.537814 AAGGGTGTATGGTGCGTCGA 61.538 55.000 0.00 0.00 0.00 4.20
560 561 1.079405 AAGGGTGTATGGTGCGTCG 60.079 57.895 0.00 0.00 0.00 5.12
561 562 0.321298 ACAAGGGTGTATGGTGCGTC 60.321 55.000 0.00 0.00 35.72 5.19
562 563 0.978151 TACAAGGGTGTATGGTGCGT 59.022 50.000 0.00 0.00 39.30 5.24
563 564 2.325583 ATACAAGGGTGTATGGTGCG 57.674 50.000 0.00 0.00 46.95 5.34
570 571 3.052414 TCCTCTAGGCATACAAGGGTGTA 60.052 47.826 3.03 0.00 38.70 2.90
571 572 2.119495 CCTCTAGGCATACAAGGGTGT 58.881 52.381 0.00 0.00 42.09 4.16
572 573 2.366916 CTCCTCTAGGCATACAAGGGTG 59.633 54.545 3.03 0.00 34.44 4.61
573 574 2.683768 CTCCTCTAGGCATACAAGGGT 58.316 52.381 3.03 0.00 34.44 4.34
574 575 1.974236 CCTCCTCTAGGCATACAAGGG 59.026 57.143 3.03 0.00 38.97 3.95
585 586 0.539051 CCACTTGCCACCTCCTCTAG 59.461 60.000 0.00 0.00 0.00 2.43
586 587 0.116342 TCCACTTGCCACCTCCTCTA 59.884 55.000 0.00 0.00 0.00 2.43
587 588 0.548682 ATCCACTTGCCACCTCCTCT 60.549 55.000 0.00 0.00 0.00 3.69
588 589 0.393537 CATCCACTTGCCACCTCCTC 60.394 60.000 0.00 0.00 0.00 3.71
589 590 1.687612 CATCCACTTGCCACCTCCT 59.312 57.895 0.00 0.00 0.00 3.69
590 591 1.379044 CCATCCACTTGCCACCTCC 60.379 63.158 0.00 0.00 0.00 4.30
591 592 2.048603 GCCATCCACTTGCCACCTC 61.049 63.158 0.00 0.00 0.00 3.85
592 593 2.036256 GCCATCCACTTGCCACCT 59.964 61.111 0.00 0.00 0.00 4.00
593 594 2.283101 TGCCATCCACTTGCCACC 60.283 61.111 0.00 0.00 0.00 4.61
594 595 2.345760 CCTGCCATCCACTTGCCAC 61.346 63.158 0.00 0.00 0.00 5.01
595 596 2.036098 CCTGCCATCCACTTGCCA 59.964 61.111 0.00 0.00 0.00 4.92
596 597 2.048603 GTCCTGCCATCCACTTGCC 61.049 63.158 0.00 0.00 0.00 4.52
597 598 0.610232 AAGTCCTGCCATCCACTTGC 60.610 55.000 0.00 0.00 0.00 4.01
598 599 1.171308 CAAGTCCTGCCATCCACTTG 58.829 55.000 0.00 0.00 39.74 3.16
599 600 0.610232 GCAAGTCCTGCCATCCACTT 60.610 55.000 0.00 0.00 46.13 3.16
600 601 1.001641 GCAAGTCCTGCCATCCACT 60.002 57.895 0.00 0.00 46.13 4.00
601 602 3.595819 GCAAGTCCTGCCATCCAC 58.404 61.111 0.00 0.00 46.13 4.02
609 610 2.538437 CTCGATTCTGAGCAAGTCCTG 58.462 52.381 0.00 0.00 0.00 3.86
610 611 1.480137 CCTCGATTCTGAGCAAGTCCT 59.520 52.381 0.00 0.00 34.56 3.85
611 612 1.478510 TCCTCGATTCTGAGCAAGTCC 59.521 52.381 0.00 0.00 34.56 3.85
612 613 2.949451 TCCTCGATTCTGAGCAAGTC 57.051 50.000 0.00 0.00 34.56 3.01
613 614 2.828520 TCTTCCTCGATTCTGAGCAAGT 59.171 45.455 8.20 0.00 35.63 3.16
614 615 3.516981 TCTTCCTCGATTCTGAGCAAG 57.483 47.619 0.00 4.02 35.49 4.01
615 616 3.961480 TTCTTCCTCGATTCTGAGCAA 57.039 42.857 0.00 0.00 34.56 3.91
616 617 5.798125 ATATTCTTCCTCGATTCTGAGCA 57.202 39.130 0.00 0.00 34.56 4.26
646 647 9.121806 AGGAGAGGCTTCCTTCATATTATTAAT 57.878 33.333 11.10 0.00 45.35 1.40
647 648 8.378565 CAGGAGAGGCTTCCTTCATATTATTAA 58.621 37.037 13.43 0.00 45.35 1.40
648 649 7.514127 ACAGGAGAGGCTTCCTTCATATTATTA 59.486 37.037 13.43 0.00 45.35 0.98
649 650 6.331307 ACAGGAGAGGCTTCCTTCATATTATT 59.669 38.462 13.43 0.00 45.35 1.40
650 651 5.848921 ACAGGAGAGGCTTCCTTCATATTAT 59.151 40.000 13.43 0.00 45.35 1.28
651 652 5.070981 CACAGGAGAGGCTTCCTTCATATTA 59.929 44.000 13.43 0.00 45.35 0.98
652 653 4.043596 ACAGGAGAGGCTTCCTTCATATT 58.956 43.478 13.43 0.00 45.35 1.28
653 654 3.390639 CACAGGAGAGGCTTCCTTCATAT 59.609 47.826 13.43 0.00 45.35 1.78
654 655 2.768527 CACAGGAGAGGCTTCCTTCATA 59.231 50.000 13.43 0.00 45.35 2.15
655 656 1.558756 CACAGGAGAGGCTTCCTTCAT 59.441 52.381 13.43 3.12 45.35 2.57
656 657 0.979665 CACAGGAGAGGCTTCCTTCA 59.020 55.000 13.43 0.00 45.35 3.02
657 658 0.980423 ACACAGGAGAGGCTTCCTTC 59.020 55.000 13.43 0.00 45.35 3.46
658 659 0.689623 CACACAGGAGAGGCTTCCTT 59.310 55.000 13.43 5.54 45.35 3.36
660 661 1.194781 TCCACACAGGAGAGGCTTCC 61.195 60.000 7.41 7.41 43.07 3.46
661 662 2.366469 TCCACACAGGAGAGGCTTC 58.634 57.895 0.00 0.00 43.07 3.86
662 663 4.648007 TCCACACAGGAGAGGCTT 57.352 55.556 0.00 0.00 43.07 4.35
670 671 6.176183 AGACAGAGAATAAAATCCACACAGG 58.824 40.000 0.00 0.00 39.47 4.00
671 672 7.678947 AAGACAGAGAATAAAATCCACACAG 57.321 36.000 0.00 0.00 0.00 3.66
672 673 8.463930 AAAAGACAGAGAATAAAATCCACACA 57.536 30.769 0.00 0.00 0.00 3.72
726 727 2.368548 TCTCCGCTACCATACCGTAGTA 59.631 50.000 0.00 0.00 38.40 1.82
731 732 2.814280 ATTTCTCCGCTACCATACCG 57.186 50.000 0.00 0.00 0.00 4.02
740 741 2.296471 CCACGGTATCTATTTCTCCGCT 59.704 50.000 0.00 0.00 44.17 5.52
749 750 3.093057 GGCATCTCTCCACGGTATCTAT 58.907 50.000 0.00 0.00 0.00 1.98
750 751 2.108425 AGGCATCTCTCCACGGTATCTA 59.892 50.000 0.00 0.00 0.00 1.98
1289 1338 0.257616 TAAGGGATTTGCCGGGGAAG 59.742 55.000 2.18 0.00 37.63 3.46
1299 1350 1.344763 CGCGGAGAGGATAAGGGATTT 59.655 52.381 0.00 0.00 0.00 2.17
1611 1709 2.145958 ATTCGATGGATGACTCGCTG 57.854 50.000 0.00 0.00 34.94 5.18
1650 1768 5.266733 AGCAACATGGCATGGTTTAATAG 57.733 39.130 29.49 12.64 35.83 1.73
1652 1770 5.674052 TTAGCAACATGGCATGGTTTAAT 57.326 34.783 29.49 12.18 35.83 1.40
1655 1773 3.864243 CATTAGCAACATGGCATGGTTT 58.136 40.909 29.49 16.88 35.83 3.27
1704 1848 3.370104 AGACGATGAGGAAAGACTGGAT 58.630 45.455 0.00 0.00 0.00 3.41
1850 2380 5.936956 AGCCTTCTGAAACAATTCTCTACTG 59.063 40.000 0.00 0.00 36.48 2.74
1857 2387 5.695851 TCTGAAGCCTTCTGAAACAATTC 57.304 39.130 11.14 0.00 35.14 2.17
1858 2388 6.469782 TTTCTGAAGCCTTCTGAAACAATT 57.530 33.333 26.18 0.00 46.07 2.32
1864 2394 4.978099 ACTGATTTCTGAAGCCTTCTGAA 58.022 39.130 19.18 19.18 43.12 3.02
1865 2395 4.630644 ACTGATTTCTGAAGCCTTCTGA 57.369 40.909 9.68 9.68 36.09 3.27
1866 2396 5.728471 TCTACTGATTTCTGAAGCCTTCTG 58.272 41.667 5.96 5.48 0.00 3.02
1867 2397 6.365970 TTCTACTGATTTCTGAAGCCTTCT 57.634 37.500 5.96 0.00 0.00 2.85
1868 2398 6.458070 GCATTCTACTGATTTCTGAAGCCTTC 60.458 42.308 0.00 0.00 0.00 3.46
1869 2399 5.356470 GCATTCTACTGATTTCTGAAGCCTT 59.644 40.000 0.00 0.00 0.00 4.35
1870 2400 4.880696 GCATTCTACTGATTTCTGAAGCCT 59.119 41.667 0.00 0.00 0.00 4.58
1871 2401 4.036144 GGCATTCTACTGATTTCTGAAGCC 59.964 45.833 0.00 0.00 0.00 4.35
1872 2402 4.880696 AGGCATTCTACTGATTTCTGAAGC 59.119 41.667 0.00 0.00 0.00 3.86
1873 2403 5.879223 ACAGGCATTCTACTGATTTCTGAAG 59.121 40.000 0.00 0.00 38.09 3.02
1874 2404 5.809001 ACAGGCATTCTACTGATTTCTGAA 58.191 37.500 0.00 0.00 38.09 3.02
1875 2405 5.426689 ACAGGCATTCTACTGATTTCTGA 57.573 39.130 0.00 0.00 38.09 3.27
1876 2406 6.149973 TCAAACAGGCATTCTACTGATTTCTG 59.850 38.462 0.00 0.00 38.09 3.02
1877 2407 6.240894 TCAAACAGGCATTCTACTGATTTCT 58.759 36.000 0.00 0.00 38.09 2.52
1878 2408 6.500684 TCAAACAGGCATTCTACTGATTTC 57.499 37.500 0.00 0.00 38.09 2.17
1879 2409 7.177216 TGAATCAAACAGGCATTCTACTGATTT 59.823 33.333 0.00 0.00 38.09 2.17
1880 2410 6.660521 TGAATCAAACAGGCATTCTACTGATT 59.339 34.615 0.00 0.00 38.09 2.57
1881 2411 6.182627 TGAATCAAACAGGCATTCTACTGAT 58.817 36.000 0.00 0.00 38.09 2.90
1882 2412 5.559770 TGAATCAAACAGGCATTCTACTGA 58.440 37.500 0.00 0.00 38.09 3.41
1883 2413 5.413833 ACTGAATCAAACAGGCATTCTACTG 59.586 40.000 0.00 0.00 39.38 2.74
1884 2414 5.564550 ACTGAATCAAACAGGCATTCTACT 58.435 37.500 0.00 0.00 39.38 2.57
1885 2415 5.163713 GGACTGAATCAAACAGGCATTCTAC 60.164 44.000 0.00 0.00 44.34 2.59
1886 2416 4.943705 GGACTGAATCAAACAGGCATTCTA 59.056 41.667 0.00 0.00 44.34 2.10
1887 2417 3.760684 GGACTGAATCAAACAGGCATTCT 59.239 43.478 0.00 0.00 44.34 2.40
1888 2418 3.760684 AGGACTGAATCAAACAGGCATTC 59.239 43.478 0.00 0.00 44.34 2.67
1889 2419 3.771216 AGGACTGAATCAAACAGGCATT 58.229 40.909 0.00 0.00 44.34 3.56
1890 2420 3.446442 AGGACTGAATCAAACAGGCAT 57.554 42.857 0.00 0.00 44.34 4.40
1891 2421 2.886523 CAAGGACTGAATCAAACAGGCA 59.113 45.455 0.00 0.00 44.34 4.75
1892 2422 2.887152 ACAAGGACTGAATCAAACAGGC 59.113 45.455 0.00 0.00 42.10 4.85
1921 2455 1.847798 GATACCCTGCACCCACCACA 61.848 60.000 0.00 0.00 0.00 4.17
1922 2456 1.077716 GATACCCTGCACCCACCAC 60.078 63.158 0.00 0.00 0.00 4.16
1953 2489 1.327303 GTGCCCATCACAAACTCCAA 58.673 50.000 0.00 0.00 44.98 3.53
2051 2648 2.760634 TTGATTGCGAGTAGGAAGCA 57.239 45.000 0.00 0.00 44.61 3.91
2065 2665 8.558700 GGAAGCAATACACACAAAAATTTGATT 58.441 29.630 12.54 0.00 40.55 2.57
2072 2672 6.872920 AGAAAGGAAGCAATACACACAAAAA 58.127 32.000 0.00 0.00 0.00 1.94
3442 4068 2.692557 CTCCCCTAGCATATCATCCTCG 59.307 54.545 0.00 0.00 0.00 4.63
3492 4118 9.996554 TTAGTGACTTAACAGATTGAATTCTGA 57.003 29.630 7.05 0.00 44.88 3.27
3598 4225 5.065346 GCTAGCCTTTTCTTGACAAGGTATC 59.935 44.000 15.13 1.14 41.63 2.24
3599 4226 4.944317 GCTAGCCTTTTCTTGACAAGGTAT 59.056 41.667 15.13 8.31 41.63 2.73
3600 4227 4.041691 AGCTAGCCTTTTCTTGACAAGGTA 59.958 41.667 12.13 1.40 41.63 3.08
3601 4228 3.149981 GCTAGCCTTTTCTTGACAAGGT 58.850 45.455 15.13 6.64 41.63 3.50
3602 4229 3.416156 AGCTAGCCTTTTCTTGACAAGG 58.584 45.455 12.13 10.32 42.39 3.61
3603 4230 5.703130 ACTAAGCTAGCCTTTTCTTGACAAG 59.297 40.000 12.13 9.03 34.95 3.16
3604 4231 5.621193 ACTAAGCTAGCCTTTTCTTGACAA 58.379 37.500 12.13 0.00 34.95 3.18
3605 4232 5.228945 ACTAAGCTAGCCTTTTCTTGACA 57.771 39.130 12.13 0.00 34.95 3.58
3606 4233 5.935206 AGAACTAAGCTAGCCTTTTCTTGAC 59.065 40.000 12.13 0.00 30.19 3.18
3607 4234 6.115448 AGAACTAAGCTAGCCTTTTCTTGA 57.885 37.500 12.13 0.00 30.19 3.02
3608 4235 7.100409 AGTAGAACTAAGCTAGCCTTTTCTTG 58.900 38.462 12.13 0.00 34.25 3.02
3609 4236 7.247456 AGTAGAACTAAGCTAGCCTTTTCTT 57.753 36.000 12.13 0.00 34.25 2.52
3610 4237 6.127281 GGAGTAGAACTAAGCTAGCCTTTTCT 60.127 42.308 12.13 15.73 35.70 2.52
3611 4238 6.044046 GGAGTAGAACTAAGCTAGCCTTTTC 58.956 44.000 12.13 9.27 34.95 2.29
3612 4239 5.722441 AGGAGTAGAACTAAGCTAGCCTTTT 59.278 40.000 12.13 1.56 34.95 2.27
3613 4240 5.274015 AGGAGTAGAACTAAGCTAGCCTTT 58.726 41.667 12.13 2.38 34.95 3.11
3614 4241 4.874199 AGGAGTAGAACTAAGCTAGCCTT 58.126 43.478 12.13 7.83 37.57 4.35
3615 4242 4.529716 AGGAGTAGAACTAAGCTAGCCT 57.470 45.455 12.13 0.00 0.00 4.58
3616 4243 5.601583 AAAGGAGTAGAACTAAGCTAGCC 57.398 43.478 12.13 0.00 0.00 3.93
3617 4244 6.399743 ACAAAAGGAGTAGAACTAAGCTAGC 58.600 40.000 6.62 6.62 0.00 3.42
3618 4245 7.832769 AGACAAAAGGAGTAGAACTAAGCTAG 58.167 38.462 0.00 0.00 0.00 3.42
3619 4246 7.778185 AGACAAAAGGAGTAGAACTAAGCTA 57.222 36.000 0.00 0.00 0.00 3.32
3620 4247 6.673839 AGACAAAAGGAGTAGAACTAAGCT 57.326 37.500 0.00 0.00 0.00 3.74
3621 4248 9.438228 AATAAGACAAAAGGAGTAGAACTAAGC 57.562 33.333 0.00 0.00 0.00 3.09
3624 4251 9.720769 CCAAATAAGACAAAAGGAGTAGAACTA 57.279 33.333 0.00 0.00 0.00 2.24
3966 4606 2.097304 TGGATTGAAAACATCCGCATCG 59.903 45.455 0.00 0.00 43.04 3.84
4075 4717 4.806330 ACTAGAGTGACACATGGTTTACG 58.194 43.478 8.59 0.00 0.00 3.18
4307 5402 5.173774 TGCTTTGTTTGATCAGAAGTGTC 57.826 39.130 0.00 0.00 0.00 3.67
4910 6343 4.082408 CAGTGGTAACTAGGATCACAACGA 60.082 45.833 11.59 0.00 33.79 3.85
4927 6360 5.046950 GGATCTCTAAGAGTTTGACAGTGGT 60.047 44.000 0.00 0.00 0.00 4.16
5197 6689 6.918569 CAGCAAAATTCATGAAATGGCAAAAA 59.081 30.769 20.17 0.00 46.73 1.94
5562 7084 1.601903 GTTGTGTGAATCGTTGCTCCA 59.398 47.619 0.00 0.00 0.00 3.86
5859 7381 8.416329 ACCAGAGAATATAACCAATTCAAATGC 58.584 33.333 0.00 0.00 36.09 3.56
5957 7480 5.239525 ACATCTTTGAGCACTTCAGGTAAAC 59.760 40.000 0.00 0.00 37.07 2.01
5998 7521 4.887071 TCTGAAGAAAAAGCAGTGCCTTTA 59.113 37.500 12.58 3.55 34.12 1.85
6020 7543 3.801698 TGCCTATGAGCACTTCATCTTC 58.198 45.455 0.00 0.00 43.03 2.87
6036 7560 5.897250 TCAACAGACAAGGACTATATGCCTA 59.103 40.000 0.00 0.00 33.20 3.93
6041 7565 5.395768 GCCACTCAACAGACAAGGACTATAT 60.396 44.000 0.00 0.00 0.00 0.86
6042 7566 4.081642 GCCACTCAACAGACAAGGACTATA 60.082 45.833 0.00 0.00 0.00 1.31
6051 7577 1.270839 GCCTTAGCCACTCAACAGACA 60.271 52.381 0.00 0.00 0.00 3.41
6064 7590 2.152016 ACGAAGTTCCTTTGCCTTAGC 58.848 47.619 0.00 0.00 37.78 3.09
6140 7666 9.632638 AGTTTTATCACCAAAGATGTATAGCAT 57.367 29.630 0.00 0.00 41.24 3.79
6477 8004 8.630917 GGCAGATCTATAGTCTGTAAAAGTGTA 58.369 37.037 22.41 0.00 43.86 2.90
6540 8070 0.402504 TGCCCGGTACTTGTGGATTT 59.597 50.000 0.00 0.00 0.00 2.17
6541 8071 0.623723 ATGCCCGGTACTTGTGGATT 59.376 50.000 0.00 0.00 0.00 3.01
6574 8104 3.084786 GAGGCCATGCTGAAGTTTTAGT 58.915 45.455 5.01 0.00 0.00 2.24
6733 8264 4.732285 ATGTAGTGTCAAAACGCTCTTG 57.268 40.909 0.00 0.00 42.59 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.