Multiple sequence alignment - TraesCS6D01G376900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G376900 chr6D 100.000 7429 0 0 1 7429 459700715 459693287 0.000000e+00 13719.0
1 TraesCS6D01G376900 chr6A 91.294 6800 387 100 3 6733 605382540 605375877 0.000000e+00 9088.0
2 TraesCS6D01G376900 chr6B 92.155 5838 303 80 197 5993 699009986 699004263 0.000000e+00 8100.0
3 TraesCS6D01G376900 chr6B 88.929 560 37 11 6179 6733 699004079 699003540 0.000000e+00 667.0
4 TraesCS6D01G376900 chr1B 79.787 564 74 16 6837 7375 49658982 49659530 2.530000e-99 374.0
5 TraesCS6D01G376900 chr1B 94.000 50 3 0 5356 5405 437592527 437592576 7.990000e-10 76.8
6 TraesCS6D01G376900 chr5B 81.641 463 60 15 6989 7429 609687388 609686929 1.970000e-95 361.0
7 TraesCS6D01G376900 chr7B 80.517 503 69 14 6898 7375 682002004 682002502 7.090000e-95 359.0
8 TraesCS6D01G376900 chr2D 75.809 649 117 21 6777 7404 20750076 20750705 7.290000e-75 292.0
9 TraesCS6D01G376900 chr2D 80.147 272 44 8 2914 3182 370240080 370240344 2.110000e-45 195.0
10 TraesCS6D01G376900 chr5D 80.831 313 34 12 6898 7186 461576491 461576801 9.700000e-54 222.0
11 TraesCS6D01G376900 chr5D 81.915 188 24 7 7189 7375 461586706 461586884 4.640000e-32 150.0
12 TraesCS6D01G376900 chr2A 80.515 272 43 8 2914 3182 501320046 501320310 4.550000e-47 200.0
13 TraesCS6D01G376900 chr2B 80.147 272 43 10 2914 3182 439770271 439770534 7.610000e-45 193.0
14 TraesCS6D01G376900 chr7D 76.316 228 27 8 5209 5435 185830197 185830398 6.140000e-16 97.1
15 TraesCS6D01G376900 chr5A 94.000 50 3 0 5356 5405 59629023 59629072 7.990000e-10 76.8
16 TraesCS6D01G376900 chr4B 93.750 48 3 0 5358 5405 79296289 79296242 1.030000e-08 73.1
17 TraesCS6D01G376900 chr7A 92.000 50 4 0 5356 5405 487704539 487704490 3.720000e-08 71.3
18 TraesCS6D01G376900 chr1A 92.000 50 4 0 5356 5405 509025361 509025312 3.720000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G376900 chr6D 459693287 459700715 7428 True 13719.0 13719 100.000 1 7429 1 chr6D.!!$R1 7428
1 TraesCS6D01G376900 chr6A 605375877 605382540 6663 True 9088.0 9088 91.294 3 6733 1 chr6A.!!$R1 6730
2 TraesCS6D01G376900 chr6B 699003540 699009986 6446 True 4383.5 8100 90.542 197 6733 2 chr6B.!!$R1 6536
3 TraesCS6D01G376900 chr1B 49658982 49659530 548 False 374.0 374 79.787 6837 7375 1 chr1B.!!$F1 538
4 TraesCS6D01G376900 chr2D 20750076 20750705 629 False 292.0 292 75.809 6777 7404 1 chr2D.!!$F1 627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
234 236 0.036010 CTCCAATGACGGAGCAAGGT 60.036 55.000 0.00 0.00 45.95 3.50 F
1257 1297 0.106894 TCTGCTCCTCGATCGCTAGA 59.893 55.000 11.09 5.83 0.00 2.43 F
1433 1488 0.470341 GGGACTGGGAGTTAGGATGC 59.530 60.000 0.00 0.00 0.00 3.91 F
1998 2056 0.745845 ATGGGACGTCAATGCTCTGC 60.746 55.000 18.91 0.00 0.00 4.26 F
2495 2555 1.004440 GAGCTGTCGTTGGGCTTCT 60.004 57.895 0.00 0.00 36.37 2.85 F
3784 3850 0.174617 TTCACTCATGCGCGATGGTA 59.825 50.000 12.10 0.00 32.26 3.25 F
4257 4323 1.719600 GAGCTGTTCCTACTGTGCAG 58.280 55.000 0.00 0.00 0.00 4.41 F
5628 5698 1.765314 GAGCATGAGGTATGTCCCACT 59.235 52.381 0.00 0.00 39.08 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1998 2056 0.109723 TTCCCCAAACCTCCAAGACG 59.890 55.000 0.00 0.0 0.00 4.18 R
2469 2529 1.148310 CAACGACAGCTCCGATTGTT 58.852 50.000 11.50 0.0 0.00 2.83 R
2505 2565 1.662629 CAGTAATGGCAAGCGTGAGAG 59.337 52.381 2.99 0.0 0.00 3.20 R
3696 3762 0.744414 CAATGTCCCAGCACCTACCG 60.744 60.000 0.00 0.0 0.00 4.02 R
4063 4129 0.453793 CACGCTTCCAACAACCAACA 59.546 50.000 0.00 0.0 0.00 3.33 R
5729 5802 0.320771 CCTGACCTTTGACCTGACGG 60.321 60.000 0.00 0.0 0.00 4.79 R
5817 5890 0.468226 ACCTGAGTGCGGACTTTTGA 59.532 50.000 12.08 0.0 30.16 2.69 R
7082 7228 0.101399 CAGCGACAGAGGCGTTAGAT 59.899 55.000 0.00 0.0 35.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 6.534793 ACATTTTGAATTTCATATCCAACGGC 59.465 34.615 0.00 0.00 0.00 5.68
43 45 0.685097 TCATATCCAACGGCTAGGCC 59.315 55.000 11.22 0.00 46.75 5.19
64 66 3.051327 CGAGCATGATAAGTGAGAGCAG 58.949 50.000 0.00 0.00 0.00 4.24
67 69 2.871022 GCATGATAAGTGAGAGCAGTGG 59.129 50.000 0.00 0.00 0.00 4.00
78 80 4.408821 GCAGTGGTGATCCCGGCA 62.409 66.667 0.00 0.00 35.15 5.69
79 81 2.591753 CAGTGGTGATCCCGGCAT 59.408 61.111 0.00 0.00 35.15 4.40
80 82 1.077501 CAGTGGTGATCCCGGCATT 60.078 57.895 0.00 0.00 35.15 3.56
81 83 1.077501 AGTGGTGATCCCGGCATTG 60.078 57.895 0.00 0.00 35.15 2.82
82 84 2.120909 GTGGTGATCCCGGCATTGG 61.121 63.158 0.00 0.00 35.15 3.16
92 94 3.777910 GGCATTGGGGCAAGCCAG 61.778 66.667 13.87 0.00 46.26 4.85
93 95 3.777910 GCATTGGGGCAAGCCAGG 61.778 66.667 13.87 0.00 37.98 4.45
94 96 3.078836 CATTGGGGCAAGCCAGGG 61.079 66.667 13.87 0.00 37.98 4.45
122 124 0.809385 TCGGATCTCCAACGACAGAC 59.191 55.000 0.00 0.00 35.14 3.51
123 125 0.523546 CGGATCTCCAACGACAGACG 60.524 60.000 0.00 0.00 41.36 4.18
128 130 2.432628 CCAACGACAGACGAGGGC 60.433 66.667 0.00 0.00 45.77 5.19
131 133 0.670546 CAACGACAGACGAGGGCAAT 60.671 55.000 0.00 0.00 45.77 3.56
150 152 3.714798 CAATCCCCTTACCTACTAGCCAA 59.285 47.826 0.00 0.00 0.00 4.52
151 153 2.755686 TCCCCTTACCTACTAGCCAAC 58.244 52.381 0.00 0.00 0.00 3.77
153 155 2.841881 CCCCTTACCTACTAGCCAACAA 59.158 50.000 0.00 0.00 0.00 2.83
154 156 3.370209 CCCCTTACCTACTAGCCAACAAC 60.370 52.174 0.00 0.00 0.00 3.32
155 157 3.262405 CCCTTACCTACTAGCCAACAACA 59.738 47.826 0.00 0.00 0.00 3.33
156 158 4.080526 CCCTTACCTACTAGCCAACAACAT 60.081 45.833 0.00 0.00 0.00 2.71
157 159 4.876107 CCTTACCTACTAGCCAACAACATG 59.124 45.833 0.00 0.00 0.00 3.21
158 160 2.711542 ACCTACTAGCCAACAACATGC 58.288 47.619 0.00 0.00 0.00 4.06
166 168 1.799917 GCCAACAACATGCCATCATCG 60.800 52.381 0.00 0.00 0.00 3.84
172 174 0.757512 ACATGCCATCATCGAGCTCT 59.242 50.000 12.85 0.00 0.00 4.09
177 179 0.383590 CCATCATCGAGCTCTGTCGT 59.616 55.000 12.85 0.00 40.93 4.34
178 180 1.604278 CCATCATCGAGCTCTGTCGTA 59.396 52.381 12.85 0.00 40.93 3.43
179 181 2.227626 CCATCATCGAGCTCTGTCGTAT 59.772 50.000 12.85 0.00 40.93 3.06
180 182 3.304996 CCATCATCGAGCTCTGTCGTATT 60.305 47.826 12.85 0.00 40.93 1.89
185 187 3.499048 TCGAGCTCTGTCGTATTTTGTC 58.501 45.455 12.85 0.00 40.93 3.18
190 192 2.587956 TCTGTCGTATTTTGTCGGTCG 58.412 47.619 0.00 0.00 0.00 4.79
191 193 1.058695 CTGTCGTATTTTGTCGGTCGC 59.941 52.381 0.00 0.00 0.00 5.19
221 223 2.308866 ACTTCCATTTCGGGTCTCCAAT 59.691 45.455 0.00 0.00 34.36 3.16
223 225 1.912731 TCCATTTCGGGTCTCCAATGA 59.087 47.619 0.00 0.00 31.62 2.57
225 227 1.665679 CATTTCGGGTCTCCAATGACG 59.334 52.381 0.00 0.00 37.81 4.35
227 229 0.901114 TTCGGGTCTCCAATGACGGA 60.901 55.000 0.00 0.00 37.81 4.69
234 236 0.036010 CTCCAATGACGGAGCAAGGT 60.036 55.000 0.00 0.00 45.95 3.50
236 238 0.321564 CCAATGACGGAGCAAGGTGA 60.322 55.000 0.00 0.00 0.00 4.02
250 255 1.540617 GGTGACCCCCTTACCCAGT 60.541 63.158 0.00 0.00 0.00 4.00
301 306 3.691342 CTCCGTTGGTCGCCCTGA 61.691 66.667 0.00 0.00 38.35 3.86
309 314 3.119637 CGTTGGTCGCCCTGATAAATTTT 60.120 43.478 0.00 0.00 0.00 1.82
315 320 5.163561 GGTCGCCCTGATAAATTTTCATTCA 60.164 40.000 0.00 0.00 0.00 2.57
321 326 7.935210 GCCCTGATAAATTTTCATTCATGGATT 59.065 33.333 0.00 0.00 0.00 3.01
345 355 1.064621 CTGCGCGGGATGAAATTGG 59.935 57.895 8.83 0.00 0.00 3.16
346 356 2.340453 CTGCGCGGGATGAAATTGGG 62.340 60.000 8.83 0.00 0.00 4.12
349 359 1.727467 GCGGGATGAAATTGGGTCG 59.273 57.895 0.00 0.00 0.00 4.79
355 365 3.081804 GGATGAAATTGGGTCGTGAACT 58.918 45.455 0.00 0.00 0.00 3.01
361 371 7.931578 TGAAATTGGGTCGTGAACTAATATT 57.068 32.000 0.00 0.00 0.00 1.28
363 373 9.621629 TGAAATTGGGTCGTGAACTAATATTAT 57.378 29.630 0.00 0.00 0.00 1.28
366 376 9.621629 AATTGGGTCGTGAACTAATATTATCAA 57.378 29.630 0.00 0.00 0.00 2.57
368 378 8.657074 TGGGTCGTGAACTAATATTATCAAAG 57.343 34.615 0.00 0.00 0.00 2.77
369 379 8.479689 TGGGTCGTGAACTAATATTATCAAAGA 58.520 33.333 0.00 0.00 0.00 2.52
406 422 1.207593 GTGGCAAGTCACATCACGC 59.792 57.895 0.00 0.00 37.57 5.34
420 436 2.286365 TCACGCCCTGAAAAGGAATT 57.714 45.000 0.00 0.00 0.00 2.17
423 439 3.005367 TCACGCCCTGAAAAGGAATTTTC 59.995 43.478 6.53 6.53 40.39 2.29
424 440 3.005791 CACGCCCTGAAAAGGAATTTTCT 59.994 43.478 13.00 0.00 40.56 2.52
425 441 3.255888 ACGCCCTGAAAAGGAATTTTCTC 59.744 43.478 13.00 2.21 40.56 2.87
496 520 1.875963 CGCCTAGTTGCAACCCAAG 59.124 57.895 25.62 19.07 33.21 3.61
525 549 2.034066 CGCCCATCACACCAACCT 59.966 61.111 0.00 0.00 0.00 3.50
526 550 1.298340 CGCCCATCACACCAACCTA 59.702 57.895 0.00 0.00 0.00 3.08
871 900 8.926710 CCTCGCTCAAAGATCGTTTATTTATAT 58.073 33.333 0.00 0.00 0.00 0.86
874 903 9.676899 CGCTCAAAGATCGTTTATTTATATAGC 57.323 33.333 0.00 0.00 0.00 2.97
1188 1224 4.516195 GAGTTCTCCGCCTCCGCC 62.516 72.222 0.00 0.00 0.00 6.13
1255 1295 0.179043 ACTCTGCTCCTCGATCGCTA 60.179 55.000 11.09 0.00 0.00 4.26
1257 1297 0.106894 TCTGCTCCTCGATCGCTAGA 59.893 55.000 11.09 5.83 0.00 2.43
1259 1299 2.028020 TCTGCTCCTCGATCGCTAGATA 60.028 50.000 11.09 0.00 37.19 1.98
1261 1301 2.289756 TGCTCCTCGATCGCTAGATACT 60.290 50.000 11.09 0.00 37.19 2.12
1262 1302 2.095213 GCTCCTCGATCGCTAGATACTG 59.905 54.545 11.09 0.00 37.19 2.74
1263 1303 2.077627 TCCTCGATCGCTAGATACTGC 58.922 52.381 11.09 0.00 37.19 4.40
1265 1305 2.095213 CCTCGATCGCTAGATACTGCTC 59.905 54.545 11.09 0.00 37.19 4.26
1266 1306 3.000041 CTCGATCGCTAGATACTGCTCT 59.000 50.000 11.09 0.00 37.19 4.09
1267 1307 3.403968 TCGATCGCTAGATACTGCTCTT 58.596 45.455 11.09 0.00 37.19 2.85
1268 1308 3.187432 TCGATCGCTAGATACTGCTCTTG 59.813 47.826 11.09 0.00 37.19 3.02
1270 1310 2.302260 TCGCTAGATACTGCTCTTGCT 58.698 47.619 0.00 0.00 40.43 3.91
1271 1311 2.033927 TCGCTAGATACTGCTCTTGCTG 59.966 50.000 0.00 0.00 40.43 4.41
1277 1327 3.260380 AGATACTGCTCTTGCTGTCAACT 59.740 43.478 3.97 1.39 46.06 3.16
1282 1332 0.882042 CTCTTGCTGTCAACTGCGGT 60.882 55.000 0.00 0.00 42.71 5.68
1294 1344 1.154150 CTGCGGTGCTTGCTTTAGC 60.154 57.895 0.00 0.00 41.59 3.09
1295 1345 2.179267 GCGGTGCTTGCTTTAGCC 59.821 61.111 0.00 0.00 40.49 3.93
1298 1348 1.586541 GGTGCTTGCTTTAGCCCAC 59.413 57.895 0.00 4.38 40.49 4.61
1299 1349 1.210155 GTGCTTGCTTTAGCCCACG 59.790 57.895 0.00 0.00 40.49 4.94
1345 1400 1.893808 CATGGCTGGTGGCGGATAC 60.894 63.158 0.00 0.00 42.94 2.24
1370 1425 2.027192 TCAGTAAGACAGGGACATTGCC 60.027 50.000 0.00 0.00 0.00 4.52
1377 1432 1.545582 ACAGGGACATTGCCGATTTTG 59.454 47.619 0.00 0.00 30.73 2.44
1415 1470 3.128764 TCGTACACAGAGATAGCAACAGG 59.871 47.826 0.00 0.00 0.00 4.00
1417 1472 2.540383 ACACAGAGATAGCAACAGGGA 58.460 47.619 0.00 0.00 0.00 4.20
1418 1473 2.234908 ACACAGAGATAGCAACAGGGAC 59.765 50.000 0.00 0.00 0.00 4.46
1419 1474 2.499289 CACAGAGATAGCAACAGGGACT 59.501 50.000 0.00 0.00 43.88 3.85
1432 1487 2.182516 AGGGACTGGGAGTTAGGATG 57.817 55.000 0.00 0.00 37.18 3.51
1433 1488 0.470341 GGGACTGGGAGTTAGGATGC 59.530 60.000 0.00 0.00 0.00 3.91
1434 1489 1.204146 GGACTGGGAGTTAGGATGCA 58.796 55.000 0.00 0.00 0.00 3.96
1435 1490 1.771255 GGACTGGGAGTTAGGATGCAT 59.229 52.381 0.00 0.00 0.00 3.96
1436 1491 2.173569 GGACTGGGAGTTAGGATGCATT 59.826 50.000 0.00 0.00 0.00 3.56
1437 1492 3.372025 GGACTGGGAGTTAGGATGCATTT 60.372 47.826 0.00 0.00 0.00 2.32
1460 1515 5.633830 TTCATCTTGATTTCAGTGCTTCC 57.366 39.130 0.00 0.00 0.00 3.46
1486 1542 0.944311 TTCTTGCTGCGTTCGGTCTC 60.944 55.000 0.00 0.00 0.00 3.36
1519 1575 4.579869 TGCCTTAAAGTTGTGATCTCTCC 58.420 43.478 0.00 0.00 0.00 3.71
1669 1725 4.021925 GACGTCAGCAAGGGCCCT 62.022 66.667 22.28 22.28 42.56 5.19
1700 1756 2.628657 AGTGTAGGTGTCTTCTGGTGAC 59.371 50.000 0.00 0.00 35.21 3.67
1718 1775 2.948979 TGACGGCTGTTGACTGAATTTT 59.051 40.909 0.00 0.00 0.00 1.82
1907 1965 2.791383 CTCACCTATTCTGAGCTCCG 57.209 55.000 12.15 4.74 0.00 4.63
1938 1996 5.476599 GGTTTGCCAGGTAATGATGCATATA 59.523 40.000 0.00 0.00 34.09 0.86
1997 2055 2.477825 CTATGGGACGTCAATGCTCTG 58.522 52.381 18.91 0.00 0.00 3.35
1998 2056 0.745845 ATGGGACGTCAATGCTCTGC 60.746 55.000 18.91 0.00 0.00 4.26
2044 2104 7.201635 GGTGCTGAATCTGAATTTGTTGTTTTT 60.202 33.333 0.00 0.00 0.00 1.94
2108 2168 4.047125 AAGGGGGATGCCGTGGTG 62.047 66.667 0.00 0.00 0.00 4.17
2153 2213 2.202824 CCCATTGCCATGCTTGCG 60.203 61.111 0.00 0.00 0.00 4.85
2182 2242 3.499737 CGGTGCTGTCCATTCGGC 61.500 66.667 0.00 0.00 39.84 5.54
2243 2303 3.190535 GGTCCTGTTTGCGTTTATGATGT 59.809 43.478 0.00 0.00 0.00 3.06
2469 2529 4.645136 AGGATCGACTTCTGTACTGCATAA 59.355 41.667 0.00 0.00 0.00 1.90
2475 2535 6.310467 TCGACTTCTGTACTGCATAAACAATC 59.690 38.462 0.00 0.00 0.00 2.67
2476 2536 6.408858 ACTTCTGTACTGCATAAACAATCG 57.591 37.500 0.00 0.00 0.00 3.34
2484 2544 2.677836 TGCATAAACAATCGGAGCTGTC 59.322 45.455 0.00 0.00 0.00 3.51
2495 2555 1.004440 GAGCTGTCGTTGGGCTTCT 60.004 57.895 0.00 0.00 36.37 2.85
2524 2584 1.276421 ACTCTCACGCTTGCCATTACT 59.724 47.619 0.00 0.00 0.00 2.24
2528 2588 1.378514 ACGCTTGCCATTACTGGGG 60.379 57.895 0.73 0.00 43.36 4.96
2534 2594 3.450817 GCTTGCCATTACTGGGGTTAATT 59.549 43.478 0.73 0.00 43.36 1.40
2539 2599 5.175127 GCCATTACTGGGGTTAATTTTGTG 58.825 41.667 0.73 0.00 43.36 3.33
2540 2600 5.279758 GCCATTACTGGGGTTAATTTTGTGT 60.280 40.000 0.73 0.00 43.36 3.72
2541 2601 6.742926 GCCATTACTGGGGTTAATTTTGTGTT 60.743 38.462 0.73 0.00 43.36 3.32
2582 2645 7.379059 TCAGATCCATATATTGTCAGTGGTT 57.621 36.000 0.00 0.00 0.00 3.67
2599 2662 3.941483 GTGGTTGACAATGGGATCAGTAG 59.059 47.826 0.00 0.00 0.00 2.57
2614 2677 7.785028 TGGGATCAGTAGTTATGATGACTTACT 59.215 37.037 0.00 0.00 37.52 2.24
2615 2678 9.298250 GGGATCAGTAGTTATGATGACTTACTA 57.702 37.037 0.00 0.00 37.52 1.82
2652 2715 8.589338 AGATCCATATATAACTGAACACTGTCC 58.411 37.037 0.00 0.00 0.00 4.02
2671 2734 8.501580 CACTGTCCAATATATAGTTTGCTGATG 58.498 37.037 0.00 0.00 0.00 3.07
2672 2735 7.173907 ACTGTCCAATATATAGTTTGCTGATGC 59.826 37.037 0.00 0.00 40.20 3.91
2681 2744 4.959596 AGTTTGCTGATGCTGACTAATG 57.040 40.909 0.00 0.00 40.48 1.90
2820 2883 3.068590 CCCTTCAACAGCAACTTGTCAAT 59.931 43.478 0.00 0.00 0.00 2.57
2848 2911 6.840527 TCCAATATGCATCCTGTATTTCAGA 58.159 36.000 0.19 0.00 46.27 3.27
2874 2937 2.103771 GCCTGCATCCTCAGATAACAGA 59.896 50.000 0.00 0.00 37.76 3.41
2912 2975 9.492730 AACCATTATTCCTTGGACATATCTTTT 57.507 29.630 0.00 0.00 36.79 2.27
3252 3315 8.625786 TTGTTTGGGGAACTACTAATAGAAAC 57.374 34.615 0.00 0.00 39.08 2.78
3258 3321 6.351966 GGGGAACTACTAATAGAAACTGCTGT 60.352 42.308 0.00 0.00 32.23 4.40
3282 3345 7.039363 TGTTTTTCCCTTATACCTTCCATTGTG 60.039 37.037 0.00 0.00 0.00 3.33
3480 3543 9.541143 GAATGGAAGAAAATTCAGTGGTTTTAA 57.459 29.630 7.01 0.00 33.77 1.52
3513 3576 5.049680 GGTTGTCATTATGTTTGACGTGTCT 60.050 40.000 0.00 0.00 45.14 3.41
3681 3747 6.790232 TGAATCATGTACATGTAGACTCCA 57.210 37.500 30.03 17.76 39.72 3.86
3696 3762 1.282157 ACTCCAAACTACCCTGATGCC 59.718 52.381 0.00 0.00 0.00 4.40
3700 3766 1.208535 CAAACTACCCTGATGCCGGTA 59.791 52.381 1.90 0.00 33.36 4.02
3784 3850 0.174617 TTCACTCATGCGCGATGGTA 59.825 50.000 12.10 0.00 32.26 3.25
4063 4129 4.442706 AGTGAACACGAATTGAACTGTCT 58.557 39.130 0.00 0.00 36.20 3.41
4233 4299 6.387465 TCGTATGACTTAACAACCAGAAGAG 58.613 40.000 0.00 0.00 0.00 2.85
4246 4312 2.415357 CCAGAAGAGTCTCGAGCTGTTC 60.415 54.545 25.39 25.39 36.76 3.18
4257 4323 1.719600 GAGCTGTTCCTACTGTGCAG 58.280 55.000 0.00 0.00 0.00 4.41
4262 4328 3.062763 CTGTTCCTACTGTGCAGAACTG 58.937 50.000 13.42 10.03 39.45 3.16
4332 4398 8.083828 AGCTATTAACTATCGGATTCCATGAT 57.916 34.615 3.09 1.16 0.00 2.45
4333 4399 9.201989 AGCTATTAACTATCGGATTCCATGATA 57.798 33.333 3.09 2.29 0.00 2.15
4334 4400 9.988815 GCTATTAACTATCGGATTCCATGATAT 57.011 33.333 3.09 0.00 0.00 1.63
4341 4407 8.786898 ACTATCGGATTCCATGATATGTTTTTG 58.213 33.333 3.09 0.00 0.00 2.44
4464 4531 8.328014 TGGCTGTAATATGATTTGGATAGCATA 58.672 33.333 0.00 0.00 0.00 3.14
4652 4720 3.973305 TGCATGGAGGTACATGGATAAGA 59.027 43.478 4.33 0.00 46.40 2.10
4654 4722 5.181748 GCATGGAGGTACATGGATAAGATC 58.818 45.833 4.33 0.00 46.40 2.75
4656 4724 6.745190 GCATGGAGGTACATGGATAAGATCAA 60.745 42.308 4.33 0.00 46.40 2.57
4657 4725 6.425210 TGGAGGTACATGGATAAGATCAAG 57.575 41.667 0.00 0.00 0.00 3.02
4658 4726 5.905331 TGGAGGTACATGGATAAGATCAAGT 59.095 40.000 0.00 0.00 0.00 3.16
4661 4729 7.200434 AGGTACATGGATAAGATCAAGTGTT 57.800 36.000 0.00 0.00 0.00 3.32
4662 4730 8.319057 AGGTACATGGATAAGATCAAGTGTTA 57.681 34.615 0.00 0.00 0.00 2.41
4767 4836 3.065462 GGGATTCAAAGTGCCCCAA 57.935 52.632 0.00 0.00 37.04 4.12
4839 4908 5.107298 CCTCTTAAAAGCTGACACTTCTTCG 60.107 44.000 0.00 0.00 0.00 3.79
4953 5023 4.344865 TGGCCTCAGAAACCGGGC 62.345 66.667 6.32 0.00 43.42 6.13
5031 5101 6.140303 ACAGACATATGACCATGCATTTTC 57.860 37.500 10.38 0.00 0.00 2.29
5037 5107 7.934457 ACATATGACCATGCATTTTCTCTAAC 58.066 34.615 10.38 0.00 0.00 2.34
5042 5112 5.564550 ACCATGCATTTTCTCTAACACTCT 58.435 37.500 0.00 0.00 0.00 3.24
5045 5115 6.805271 CCATGCATTTTCTCTAACACTCTTTG 59.195 38.462 0.00 0.00 0.00 2.77
5055 5125 9.944376 TTCTCTAACACTCTTTGCTATTTGTAT 57.056 29.630 0.00 0.00 0.00 2.29
5187 5257 5.182760 TGGAGATCATGACAGATATGAGACG 59.817 44.000 0.00 0.00 37.91 4.18
5267 5337 6.783708 ACTTGTTGAAGTATTTCCACCAAA 57.216 33.333 0.57 0.00 40.85 3.28
5268 5338 6.569780 ACTTGTTGAAGTATTTCCACCAAAC 58.430 36.000 0.57 0.00 40.85 2.93
5269 5339 6.153680 ACTTGTTGAAGTATTTCCACCAAACA 59.846 34.615 0.57 0.00 40.85 2.83
5270 5340 6.723298 TGTTGAAGTATTTCCACCAAACAT 57.277 33.333 0.57 0.00 30.08 2.71
5272 5342 6.097554 TGTTGAAGTATTTCCACCAAACATGT 59.902 34.615 0.00 0.00 30.08 3.21
5273 5343 6.723298 TGAAGTATTTCCACCAAACATGTT 57.277 33.333 4.92 4.92 32.09 2.71
5286 5356 6.151648 CACCAAACATGTTATGAGATCCAAGT 59.848 38.462 12.39 1.51 0.00 3.16
5288 5358 5.824904 AACATGTTATGAGATCCAAGTGC 57.175 39.130 9.97 0.00 0.00 4.40
5300 5370 5.776744 AGATCCAAGTGCATTTCAGTTTTC 58.223 37.500 0.00 0.00 36.23 2.29
5308 5378 4.089923 GTGCATTTCAGTTTTCCGCAATAC 59.910 41.667 0.00 0.00 0.00 1.89
5311 5381 3.552604 TTCAGTTTTCCGCAATACAGC 57.447 42.857 0.00 0.00 0.00 4.40
5313 5383 3.932822 TCAGTTTTCCGCAATACAGCTA 58.067 40.909 0.00 0.00 0.00 3.32
5314 5384 3.682858 TCAGTTTTCCGCAATACAGCTAC 59.317 43.478 0.00 0.00 0.00 3.58
5315 5385 3.684788 CAGTTTTCCGCAATACAGCTACT 59.315 43.478 0.00 0.00 0.00 2.57
5316 5386 4.154195 CAGTTTTCCGCAATACAGCTACTT 59.846 41.667 0.00 0.00 0.00 2.24
5317 5387 4.392138 AGTTTTCCGCAATACAGCTACTTC 59.608 41.667 0.00 0.00 0.00 3.01
5318 5388 3.887621 TTCCGCAATACAGCTACTTCT 57.112 42.857 0.00 0.00 0.00 2.85
5319 5389 3.438297 TCCGCAATACAGCTACTTCTC 57.562 47.619 0.00 0.00 0.00 2.87
5320 5390 3.024547 TCCGCAATACAGCTACTTCTCT 58.975 45.455 0.00 0.00 0.00 3.10
5322 5392 4.081642 TCCGCAATACAGCTACTTCTCTTT 60.082 41.667 0.00 0.00 0.00 2.52
5323 5393 4.268884 CCGCAATACAGCTACTTCTCTTTC 59.731 45.833 0.00 0.00 0.00 2.62
5324 5394 5.105752 CGCAATACAGCTACTTCTCTTTCT 58.894 41.667 0.00 0.00 0.00 2.52
5325 5395 5.231147 CGCAATACAGCTACTTCTCTTTCTC 59.769 44.000 0.00 0.00 0.00 2.87
5326 5396 6.337356 GCAATACAGCTACTTCTCTTTCTCT 58.663 40.000 0.00 0.00 0.00 3.10
5327 5397 7.484975 GCAATACAGCTACTTCTCTTTCTCTA 58.515 38.462 0.00 0.00 0.00 2.43
5333 5403 7.014808 ACAGCTACTTCTCTTTCTCTAAACAGT 59.985 37.037 0.00 0.00 0.00 3.55
5334 5404 7.870445 CAGCTACTTCTCTTTCTCTAAACAGTT 59.130 37.037 0.00 0.00 0.00 3.16
5335 5405 8.425703 AGCTACTTCTCTTTCTCTAAACAGTTT 58.574 33.333 3.49 3.49 0.00 2.66
5470 5540 9.555727 TTTGCTAGAGTTTAAGTTCAGTATGTT 57.444 29.630 0.00 0.00 37.40 2.71
5471 5541 9.555727 TTGCTAGAGTTTAAGTTCAGTATGTTT 57.444 29.630 0.00 0.00 37.40 2.83
5520 5590 7.310664 ACTGAGTTATCTTGCACATTTGAATG 58.689 34.615 2.29 2.29 42.10 2.67
5622 5692 2.305635 TGGTGTTGAGCATGAGGTATGT 59.694 45.455 0.00 0.00 39.08 2.29
5628 5698 1.765314 GAGCATGAGGTATGTCCCACT 59.235 52.381 0.00 0.00 39.08 4.00
5636 5706 5.030147 TGAGGTATGTCCCACTGATACTTT 58.970 41.667 0.00 0.00 36.75 2.66
5642 5712 9.036980 GGTATGTCCCACTGATACTTTATCTAT 57.963 37.037 0.00 0.00 36.17 1.98
5646 5716 7.451877 TGTCCCACTGATACTTTATCTATCCTC 59.548 40.741 0.00 0.00 36.17 3.71
5652 5722 6.875469 TGATACTTTATCTATCCTCCCCTGT 58.125 40.000 0.00 0.00 36.17 4.00
5656 5726 6.316513 ACTTTATCTATCCTCCCCTGTACTC 58.683 44.000 0.00 0.00 0.00 2.59
5667 5740 4.431378 TCCCCTGTACTCCTGTATTTTCA 58.569 43.478 0.00 0.00 0.00 2.69
5678 5751 6.548622 ACTCCTGTATTTTCAATCCCATCATG 59.451 38.462 0.00 0.00 0.00 3.07
5685 5758 9.337396 GTATTTTCAATCCCATCATGTACAGTA 57.663 33.333 0.33 0.00 0.00 2.74
5689 5762 6.348498 TCAATCCCATCATGTACAGTACTTG 58.652 40.000 17.00 17.00 35.75 3.16
5817 5890 6.096987 TGAAGAACTACGAAAGAGCCTCATAT 59.903 38.462 0.00 0.00 0.00 1.78
5891 5964 4.501071 TCCATTCTAAAGCGAGTTACACC 58.499 43.478 0.00 0.00 0.00 4.16
5926 6005 0.942410 TCTGCCTTTACGTGTGCGAC 60.942 55.000 0.00 0.00 42.00 5.19
5995 6074 5.440610 ACAAAGTGAGTTCTGACCAATTCT 58.559 37.500 0.00 0.00 0.00 2.40
5997 6076 6.483640 ACAAAGTGAGTTCTGACCAATTCTAC 59.516 38.462 0.00 0.00 0.00 2.59
6000 6079 6.773638 AGTGAGTTCTGACCAATTCTACAAT 58.226 36.000 0.00 0.00 0.00 2.71
6001 6080 6.876257 AGTGAGTTCTGACCAATTCTACAATC 59.124 38.462 0.00 0.00 0.00 2.67
6022 6129 5.023533 TCACCACTTCACCAGCTATTATC 57.976 43.478 0.00 0.00 0.00 1.75
6041 6148 0.888619 CACGAGGCCTGTAGTTCAGA 59.111 55.000 12.00 0.00 46.27 3.27
6042 6149 1.272490 CACGAGGCCTGTAGTTCAGAA 59.728 52.381 12.00 0.00 46.27 3.02
6043 6150 1.968493 ACGAGGCCTGTAGTTCAGAAA 59.032 47.619 12.00 0.00 46.27 2.52
6091 6202 2.093075 AGTCAGATGAACATGCTCCAGG 60.093 50.000 0.00 0.00 0.00 4.45
6144 6259 6.810182 AGACATAGCAAAGAATCAAAACATGC 59.190 34.615 0.00 0.00 0.00 4.06
6145 6260 6.457355 ACATAGCAAAGAATCAAAACATGCA 58.543 32.000 0.00 0.00 34.89 3.96
6146 6261 6.588756 ACATAGCAAAGAATCAAAACATGCAG 59.411 34.615 0.00 0.00 34.89 4.41
6147 6262 4.312443 AGCAAAGAATCAAAACATGCAGG 58.688 39.130 0.00 0.00 34.89 4.85
6148 6263 3.120442 GCAAAGAATCAAAACATGCAGGC 60.120 43.478 0.00 0.00 32.80 4.85
6149 6264 4.059511 CAAAGAATCAAAACATGCAGGCA 58.940 39.130 0.00 0.00 0.00 4.75
6150 6265 4.339872 AAGAATCAAAACATGCAGGCAA 57.660 36.364 0.00 0.00 0.00 4.52
6151 6266 4.339872 AGAATCAAAACATGCAGGCAAA 57.660 36.364 0.00 0.00 0.00 3.68
6152 6267 4.901868 AGAATCAAAACATGCAGGCAAAT 58.098 34.783 0.00 0.00 0.00 2.32
6153 6268 4.933400 AGAATCAAAACATGCAGGCAAATC 59.067 37.500 0.00 0.00 0.00 2.17
6154 6269 3.042871 TCAAAACATGCAGGCAAATCC 57.957 42.857 0.00 0.00 0.00 3.01
6155 6270 2.367894 TCAAAACATGCAGGCAAATCCA 59.632 40.909 0.00 0.00 37.29 3.41
6156 6271 2.739913 CAAAACATGCAGGCAAATCCAG 59.260 45.455 0.00 0.00 37.29 3.86
6157 6272 1.927487 AACATGCAGGCAAATCCAGA 58.073 45.000 0.00 0.00 37.29 3.86
6158 6273 1.471119 ACATGCAGGCAAATCCAGAG 58.529 50.000 0.00 0.00 37.29 3.35
6159 6274 1.272313 ACATGCAGGCAAATCCAGAGT 60.272 47.619 0.00 0.00 37.29 3.24
6160 6275 1.822990 CATGCAGGCAAATCCAGAGTT 59.177 47.619 0.00 0.00 37.29 3.01
6161 6276 2.877097 TGCAGGCAAATCCAGAGTTA 57.123 45.000 0.00 0.00 37.29 2.24
6162 6277 3.153369 TGCAGGCAAATCCAGAGTTAA 57.847 42.857 0.00 0.00 37.29 2.01
6163 6278 3.495331 TGCAGGCAAATCCAGAGTTAAA 58.505 40.909 0.00 0.00 37.29 1.52
6164 6279 3.894427 TGCAGGCAAATCCAGAGTTAAAA 59.106 39.130 0.00 0.00 37.29 1.52
6165 6280 4.343526 TGCAGGCAAATCCAGAGTTAAAAA 59.656 37.500 0.00 0.00 37.29 1.94
6199 6314 3.261643 TCAACTGAGCTCCTTCAATGCTA 59.738 43.478 12.15 0.00 37.16 3.49
6201 6316 4.070630 ACTGAGCTCCTTCAATGCTATC 57.929 45.455 12.15 0.00 37.16 2.08
6204 6319 3.453717 TGAGCTCCTTCAATGCTATCTGT 59.546 43.478 12.15 0.00 37.16 3.41
6218 6333 3.064545 GCTATCTGTTGCCTGTCATTCAC 59.935 47.826 0.00 0.00 0.00 3.18
6219 6334 2.636647 TCTGTTGCCTGTCATTCACA 57.363 45.000 0.00 0.00 0.00 3.58
6220 6335 3.144657 TCTGTTGCCTGTCATTCACAT 57.855 42.857 0.00 0.00 33.23 3.21
6410 6526 1.154016 CGTCGTCGACCAGCTGATT 60.154 57.895 17.39 0.32 39.71 2.57
6438 6554 6.540189 GCTCAAAGATTGCTAGGATGTAAAGA 59.460 38.462 0.00 0.00 0.00 2.52
6440 6556 8.862325 TCAAAGATTGCTAGGATGTAAAGAAA 57.138 30.769 0.00 0.00 0.00 2.52
6491 6608 2.649531 TGTGGTTGGTAGAAGGTTGG 57.350 50.000 0.00 0.00 0.00 3.77
6504 6621 6.489022 GGTAGAAGGTTGGTTTTAGTGTTCAT 59.511 38.462 0.00 0.00 0.00 2.57
6513 6630 5.070685 GGTTTTAGTGTTCATTGGTCTCCT 58.929 41.667 0.00 0.00 0.00 3.69
6521 6638 8.250143 AGTGTTCATTGGTCTCCTTTTTAATT 57.750 30.769 0.00 0.00 0.00 1.40
6522 6639 8.143835 AGTGTTCATTGGTCTCCTTTTTAATTG 58.856 33.333 0.00 0.00 0.00 2.32
6548 6665 3.922171 ATTTTCTCCTGAGGCTAGTGG 57.078 47.619 0.00 0.00 0.00 4.00
6558 6676 0.612174 AGGCTAGTGGACTGAAGCGA 60.612 55.000 0.00 0.00 35.79 4.93
6583 6701 7.690256 AGGTGTAATGTAATGTTCTCTCCTTT 58.310 34.615 0.00 0.00 0.00 3.11
6587 6705 8.783093 TGTAATGTAATGTTCTCTCCTTTTGTG 58.217 33.333 0.00 0.00 0.00 3.33
6588 6706 5.689383 TGTAATGTTCTCTCCTTTTGTGC 57.311 39.130 0.00 0.00 0.00 4.57
6610 6728 6.033513 GTGCTTCACTTTTGTAAACTTGTGTC 59.966 38.462 0.00 0.00 0.00 3.67
6629 6747 5.163652 TGTGTCTCACATATCCGTAGAGTTG 60.164 44.000 0.00 0.00 39.62 3.16
6663 6782 4.602995 TGATTGGCCGAATAAAAATACGC 58.397 39.130 0.00 0.00 0.00 4.42
6688 6807 7.523052 GCCAATAAAGGAAATGTCAACTGTGTA 60.523 37.037 0.00 0.00 0.00 2.90
6692 6811 7.581213 AAAGGAAATGTCAACTGTGTAATGA 57.419 32.000 0.00 0.00 0.00 2.57
6735 6854 8.504812 ACAAATATTGTTTTGTCAAGGCTTTT 57.495 26.923 0.00 0.00 44.39 2.27
6736 6855 8.955388 ACAAATATTGTTTTGTCAAGGCTTTTT 58.045 25.926 0.00 0.00 44.39 1.94
6760 6879 5.854431 TTGAACTTTTGTTTTGTCAAGGC 57.146 34.783 0.00 0.00 43.66 4.35
6761 6880 5.146010 TGAACTTTTGTTTTGTCAAGGCT 57.854 34.783 0.00 0.00 43.66 4.58
6762 6881 4.928615 TGAACTTTTGTTTTGTCAAGGCTG 59.071 37.500 0.00 0.00 43.66 4.85
6763 6882 3.860641 ACTTTTGTTTTGTCAAGGCTGG 58.139 40.909 0.00 0.00 0.00 4.85
6764 6883 3.260632 ACTTTTGTTTTGTCAAGGCTGGT 59.739 39.130 0.00 0.00 0.00 4.00
6765 6884 3.518634 TTTGTTTTGTCAAGGCTGGTC 57.481 42.857 0.00 0.00 0.00 4.02
6766 6885 2.435372 TGTTTTGTCAAGGCTGGTCT 57.565 45.000 0.00 0.00 0.00 3.85
6767 6886 3.569194 TGTTTTGTCAAGGCTGGTCTA 57.431 42.857 0.00 0.00 0.00 2.59
6768 6887 3.892284 TGTTTTGTCAAGGCTGGTCTAA 58.108 40.909 0.00 0.00 0.00 2.10
6769 6888 4.274147 TGTTTTGTCAAGGCTGGTCTAAA 58.726 39.130 0.00 0.00 0.00 1.85
6770 6889 4.338118 TGTTTTGTCAAGGCTGGTCTAAAG 59.662 41.667 0.00 0.00 0.00 1.85
6771 6890 4.431416 TTTGTCAAGGCTGGTCTAAAGA 57.569 40.909 0.00 0.00 0.00 2.52
6772 6891 4.431416 TTGTCAAGGCTGGTCTAAAGAA 57.569 40.909 0.00 0.00 0.00 2.52
6773 6892 4.431416 TGTCAAGGCTGGTCTAAAGAAA 57.569 40.909 0.00 0.00 0.00 2.52
6774 6893 4.787551 TGTCAAGGCTGGTCTAAAGAAAA 58.212 39.130 0.00 0.00 0.00 2.29
6775 6894 5.197451 TGTCAAGGCTGGTCTAAAGAAAAA 58.803 37.500 0.00 0.00 0.00 1.94
6791 6910 0.249398 AAAAGGCGAGTGATAGGCGT 59.751 50.000 0.00 0.00 38.03 5.68
6794 6913 2.353607 GCGAGTGATAGGCGTCGG 60.354 66.667 0.00 0.00 32.99 4.79
6796 6915 1.779025 GCGAGTGATAGGCGTCGGTA 61.779 60.000 0.00 0.00 32.99 4.02
6821 6940 2.202427 CGAAATTTCGGCCGGTGC 60.202 61.111 28.73 6.12 46.30 5.01
6822 6941 2.686816 CGAAATTTCGGCCGGTGCT 61.687 57.895 28.73 6.32 46.30 4.40
6823 6942 1.154035 GAAATTTCGGCCGGTGCTG 60.154 57.895 27.83 0.00 45.75 4.41
6835 6958 0.172578 CGGTGCTGACGTAGGATTCA 59.827 55.000 0.00 0.00 0.00 2.57
6867 6990 2.241281 TCCACGATACCTTCTTCCCA 57.759 50.000 0.00 0.00 0.00 4.37
6883 7006 1.071699 TCCCAAACTGCTTCGCTAGTT 59.928 47.619 0.00 0.00 38.70 2.24
6924 7047 1.097547 CATGACGCCTGTTCATCCCC 61.098 60.000 0.00 0.00 0.00 4.81
6928 7051 2.825836 GCCTGTTCATCCCCAGCG 60.826 66.667 0.00 0.00 0.00 5.18
6943 7066 4.899239 GCGCCCCGTGATCTCCTG 62.899 72.222 0.00 0.00 0.00 3.86
6948 7071 1.065928 CCCGTGATCTCCTGTACGC 59.934 63.158 0.00 0.00 35.39 4.42
6959 7082 4.082523 TGTACGCCAGCCAGCTCC 62.083 66.667 0.00 0.00 0.00 4.70
6982 7127 4.529219 CGTCCATGCCGCTGCCTA 62.529 66.667 0.00 0.00 36.33 3.93
6985 7130 4.488136 CCATGCCGCTGCCTACCA 62.488 66.667 0.00 0.00 36.33 3.25
6987 7132 3.402681 ATGCCGCTGCCTACCACT 61.403 61.111 0.00 0.00 36.33 4.00
6994 7139 2.203922 TGCCTACCACTGCCCTCA 60.204 61.111 0.00 0.00 0.00 3.86
7006 7151 4.096003 CCCTCATCGCCGGTGGTT 62.096 66.667 16.49 0.00 0.00 3.67
7069 7215 1.269448 CCATTGTAGCAAAACACCGCT 59.731 47.619 0.00 0.00 42.34 5.52
7082 7228 0.038251 CACCGCTGTCTAGAAGCACA 60.038 55.000 19.91 5.15 40.86 4.57
7083 7229 0.898320 ACCGCTGTCTAGAAGCACAT 59.102 50.000 19.91 7.66 40.86 3.21
7090 7236 3.770666 TGTCTAGAAGCACATCTAACGC 58.229 45.455 0.00 0.00 31.76 4.84
7124 7270 0.385751 ACCTATCTGCCGTCGTCATG 59.614 55.000 0.00 0.00 0.00 3.07
7147 7294 2.046023 CCATCGGCAGACTGGCAA 60.046 61.111 26.64 11.23 43.94 4.52
7153 7300 4.030452 GCAGACTGGCAACACCGC 62.030 66.667 4.26 0.00 46.17 5.68
7186 7333 1.404717 CCACATCTCTCAAGGTCACCG 60.405 57.143 0.00 0.00 0.00 4.94
7190 7337 0.596577 TCTCTCAAGGTCACCGTTCG 59.403 55.000 0.00 0.00 0.00 3.95
7194 7341 0.250124 TCAAGGTCACCGTTCGCATT 60.250 50.000 0.00 0.00 0.00 3.56
7258 7405 0.464013 TTTCTCCACGCCGGTTGAAA 60.464 50.000 1.90 2.71 36.61 2.69
7336 7496 4.657075 TCGAAGGTTATTTTGAGAACGC 57.343 40.909 0.00 0.00 0.00 4.84
7341 7501 2.908626 GGTTATTTTGAGAACGCTTGCG 59.091 45.455 13.70 13.70 0.00 4.85
7375 7535 1.971695 CAGGGCCCGGTTGAAACTC 60.972 63.158 18.44 0.00 0.00 3.01
7377 7537 1.228459 GGGCCCGGTTGAAACTCTT 60.228 57.895 5.69 0.00 0.00 2.85
7379 7539 1.037493 GGCCCGGTTGAAACTCTTTT 58.963 50.000 0.00 0.00 0.00 2.27
7380 7540 1.411246 GGCCCGGTTGAAACTCTTTTT 59.589 47.619 0.00 0.00 0.00 1.94
7423 7583 6.969828 TTTTTCGTAATGGTTGCAACTTTT 57.030 29.167 27.64 21.75 0.00 2.27
7424 7584 6.969828 TTTTCGTAATGGTTGCAACTTTTT 57.030 29.167 27.64 19.58 0.00 1.94
7425 7585 6.576551 TTTCGTAATGGTTGCAACTTTTTC 57.423 33.333 27.64 17.09 0.00 2.29
7426 7586 5.250235 TCGTAATGGTTGCAACTTTTTCA 57.750 34.783 27.64 17.34 0.00 2.69
7427 7587 5.277825 TCGTAATGGTTGCAACTTTTTCAG 58.722 37.500 27.64 14.35 0.00 3.02
7428 7588 5.040635 CGTAATGGTTGCAACTTTTTCAGT 58.959 37.500 27.64 17.93 37.30 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.498239 TGAAATTCAAAATGTGCCATTGAAAGA 59.502 29.630 4.51 0.00 43.79 2.52
1 2 7.640852 TGAAATTCAAAATGTGCCATTGAAAG 58.359 30.769 4.51 0.00 43.79 2.62
37 38 2.297315 TCACTTATCATGCTCGGCCTAG 59.703 50.000 0.00 0.00 0.00 3.02
43 45 3.051327 CTGCTCTCACTTATCATGCTCG 58.949 50.000 0.00 0.00 0.00 5.03
64 66 2.120909 CCAATGCCGGGATCACCAC 61.121 63.158 9.66 0.00 40.22 4.16
99 101 2.278857 CGTTGGAGATCCGAGGCG 60.279 66.667 0.00 0.00 39.43 5.52
100 102 1.227002 GTCGTTGGAGATCCGAGGC 60.227 63.158 4.24 0.00 39.43 4.70
101 103 0.101399 CTGTCGTTGGAGATCCGAGG 59.899 60.000 2.87 2.87 39.43 4.63
102 104 1.095600 TCTGTCGTTGGAGATCCGAG 58.904 55.000 0.00 0.00 39.43 4.63
103 105 0.809385 GTCTGTCGTTGGAGATCCGA 59.191 55.000 0.00 0.00 39.43 4.55
128 130 3.314693 TGGCTAGTAGGTAAGGGGATTG 58.685 50.000 0.00 0.00 0.00 2.67
131 133 2.044769 TGTTGGCTAGTAGGTAAGGGGA 59.955 50.000 0.00 0.00 0.00 4.81
144 146 2.212812 TGATGGCATGTTGTTGGCTA 57.787 45.000 3.81 0.00 42.34 3.93
145 147 1.479323 GATGATGGCATGTTGTTGGCT 59.521 47.619 3.81 0.00 42.34 4.75
150 152 1.019673 GCTCGATGATGGCATGTTGT 58.980 50.000 3.81 0.00 34.11 3.32
151 153 1.263484 GAGCTCGATGATGGCATGTTG 59.737 52.381 3.81 0.00 34.11 3.33
153 155 0.757512 AGAGCTCGATGATGGCATGT 59.242 50.000 3.81 0.00 34.11 3.21
154 156 1.149148 CAGAGCTCGATGATGGCATG 58.851 55.000 3.81 0.00 34.11 4.06
155 157 0.757512 ACAGAGCTCGATGATGGCAT 59.242 50.000 8.37 0.00 37.47 4.40
156 158 0.103755 GACAGAGCTCGATGATGGCA 59.896 55.000 8.37 0.00 0.00 4.92
157 159 0.938637 CGACAGAGCTCGATGATGGC 60.939 60.000 8.37 1.41 35.58 4.40
158 160 0.383590 ACGACAGAGCTCGATGATGG 59.616 55.000 8.37 0.00 37.11 3.51
166 168 2.599082 CCGACAAAATACGACAGAGCTC 59.401 50.000 5.27 5.27 0.00 4.09
172 174 1.062258 GCGACCGACAAAATACGACA 58.938 50.000 0.00 0.00 0.00 4.35
190 192 3.002348 CCGAAATGGAAGTTTATCTCGGC 59.998 47.826 3.76 0.00 42.00 5.54
191 193 3.560068 CCCGAAATGGAAGTTTATCTCGG 59.440 47.826 8.19 8.19 42.00 4.63
193 195 5.429130 AGACCCGAAATGGAAGTTTATCTC 58.571 41.667 0.00 0.00 42.00 2.75
221 223 2.741092 GGTCACCTTGCTCCGTCA 59.259 61.111 0.00 0.00 0.00 4.35
223 225 3.637273 GGGGTCACCTTGCTCCGT 61.637 66.667 0.00 0.00 36.80 4.69
225 227 2.936032 AGGGGGTCACCTTGCTCC 60.936 66.667 0.00 0.00 37.69 4.70
231 233 1.229853 CTGGGTAAGGGGGTCACCT 60.230 63.158 0.00 0.00 44.56 4.00
232 234 1.540617 ACTGGGTAAGGGGGTCACC 60.541 63.158 0.00 0.00 39.11 4.02
234 236 0.838987 GTCACTGGGTAAGGGGGTCA 60.839 60.000 0.00 0.00 0.00 4.02
236 238 1.540617 GGTCACTGGGTAAGGGGGT 60.541 63.158 0.00 0.00 0.00 4.95
262 267 3.816367 GAGCCTGGGATGCTACGCC 62.816 68.421 0.00 0.00 39.69 5.68
263 268 2.280457 GAGCCTGGGATGCTACGC 60.280 66.667 0.00 0.00 39.69 4.42
264 269 2.423446 GGAGCCTGGGATGCTACG 59.577 66.667 0.00 0.00 39.69 3.51
265 270 2.423446 CGGAGCCTGGGATGCTAC 59.577 66.667 0.00 0.00 39.69 3.58
299 304 7.652909 GGCGAATCCATGAATGAAAATTTATCA 59.347 33.333 0.00 0.00 34.01 2.15
301 306 7.499292 TGGCGAATCCATGAATGAAAATTTAT 58.501 30.769 0.00 0.00 40.72 1.40
330 335 1.727467 GACCCAATTTCATCCCGCG 59.273 57.895 0.00 0.00 0.00 6.46
331 336 1.029947 ACGACCCAATTTCATCCCGC 61.030 55.000 0.00 0.00 0.00 6.13
332 337 0.732571 CACGACCCAATTTCATCCCG 59.267 55.000 0.00 0.00 0.00 5.14
334 344 3.081804 AGTTCACGACCCAATTTCATCC 58.918 45.455 0.00 0.00 0.00 3.51
337 347 7.931578 AATATTAGTTCACGACCCAATTTCA 57.068 32.000 0.00 0.00 0.00 2.69
339 349 9.621629 TGATAATATTAGTTCACGACCCAATTT 57.378 29.630 1.02 0.00 0.00 1.82
340 350 9.621629 TTGATAATATTAGTTCACGACCCAATT 57.378 29.630 1.02 0.00 0.00 2.32
363 373 8.195436 ACCGAATAATAGTCGATTCTTCTTTGA 58.805 33.333 11.87 0.00 41.02 2.69
364 374 8.269424 CACCGAATAATAGTCGATTCTTCTTTG 58.731 37.037 11.87 0.00 41.02 2.77
366 376 6.924060 CCACCGAATAATAGTCGATTCTTCTT 59.076 38.462 11.87 0.00 41.02 2.52
368 378 5.118817 GCCACCGAATAATAGTCGATTCTTC 59.881 44.000 11.87 0.00 41.02 2.87
369 379 4.989168 GCCACCGAATAATAGTCGATTCTT 59.011 41.667 11.87 0.00 41.02 2.52
371 381 4.304110 TGCCACCGAATAATAGTCGATTC 58.696 43.478 11.87 0.00 41.02 2.52
372 382 4.330944 TGCCACCGAATAATAGTCGATT 57.669 40.909 11.87 0.00 41.02 3.34
373 383 4.202223 ACTTGCCACCGAATAATAGTCGAT 60.202 41.667 11.87 0.00 41.02 3.59
374 384 3.131577 ACTTGCCACCGAATAATAGTCGA 59.868 43.478 11.87 0.00 41.02 4.20
375 385 3.454375 ACTTGCCACCGAATAATAGTCG 58.546 45.455 2.90 2.90 38.24 4.18
378 388 4.188462 TGTGACTTGCCACCGAATAATAG 58.812 43.478 0.00 0.00 36.26 1.73
379 389 4.209307 TGTGACTTGCCACCGAATAATA 57.791 40.909 0.00 0.00 36.26 0.98
420 436 5.850557 TTGATTCAGCAACAAAGGAGAAA 57.149 34.783 0.00 0.00 0.00 2.52
423 439 5.166398 GGAATTGATTCAGCAACAAAGGAG 58.834 41.667 6.11 0.00 38.53 3.69
424 440 4.588106 TGGAATTGATTCAGCAACAAAGGA 59.412 37.500 6.11 0.00 38.53 3.36
425 441 4.885413 TGGAATTGATTCAGCAACAAAGG 58.115 39.130 6.11 0.00 38.53 3.11
427 443 6.036953 GTGTTTGGAATTGATTCAGCAACAAA 59.963 34.615 12.37 7.86 38.53 2.83
429 445 5.049167 GTGTTTGGAATTGATTCAGCAACA 58.951 37.500 6.11 7.83 38.53 3.33
525 549 3.896133 GCGGGGCGAGATCGTGTA 61.896 66.667 3.94 0.00 42.22 2.90
764 793 0.393267 CTTCTCCGACTCCTCCGACT 60.393 60.000 0.00 0.00 0.00 4.18
766 795 1.077644 CCTTCTCCGACTCCTCCGA 60.078 63.158 0.00 0.00 0.00 4.55
957 987 2.683933 GACGGGGAGGCAGAGGAA 60.684 66.667 0.00 0.00 0.00 3.36
1158 1194 3.894547 GAACTCGGCGCTGGGGAAA 62.895 63.158 22.56 0.00 0.00 3.13
1188 1224 2.038975 TTGGGGGAGGAGACGAGG 59.961 66.667 0.00 0.00 0.00 4.63
1255 1295 3.260380 AGTTGACAGCAAGAGCAGTATCT 59.740 43.478 0.00 0.00 40.89 1.98
1257 1297 3.332919 CAGTTGACAGCAAGAGCAGTAT 58.667 45.455 0.00 0.00 40.89 2.12
1259 1299 1.590932 CAGTTGACAGCAAGAGCAGT 58.409 50.000 0.00 0.00 43.74 4.40
1261 1301 1.501337 CGCAGTTGACAGCAAGAGCA 61.501 55.000 0.00 0.00 45.49 4.26
1262 1302 1.206072 CGCAGTTGACAGCAAGAGC 59.794 57.895 0.00 0.00 42.56 4.09
1263 1303 0.882042 ACCGCAGTTGACAGCAAGAG 60.882 55.000 0.00 0.00 34.01 2.85
1265 1305 1.280746 CACCGCAGTTGACAGCAAG 59.719 57.895 0.00 0.00 34.01 4.01
1266 1306 2.833533 GCACCGCAGTTGACAGCAA 61.834 57.895 0.00 0.00 0.00 3.91
1267 1307 3.279116 GCACCGCAGTTGACAGCA 61.279 61.111 0.00 0.00 0.00 4.41
1268 1308 2.546494 AAGCACCGCAGTTGACAGC 61.546 57.895 0.00 0.00 0.00 4.40
1270 1310 2.833533 GCAAGCACCGCAGTTGACA 61.834 57.895 0.00 0.00 0.00 3.58
1271 1311 2.050985 GCAAGCACCGCAGTTGAC 60.051 61.111 0.00 0.00 0.00 3.18
1277 1327 2.625823 GGCTAAAGCAAGCACCGCA 61.626 57.895 4.07 0.00 44.64 5.69
1282 1332 0.536233 TTCGTGGGCTAAAGCAAGCA 60.536 50.000 4.07 0.00 44.64 3.91
1294 1344 1.001974 TCAGGACAAGACATTCGTGGG 59.998 52.381 0.00 0.00 30.01 4.61
1295 1345 2.455674 TCAGGACAAGACATTCGTGG 57.544 50.000 0.00 0.00 30.01 4.94
1298 1348 4.436332 TCATGATCAGGACAAGACATTCG 58.564 43.478 5.84 0.00 0.00 3.34
1299 1349 6.053650 TGATCATGATCAGGACAAGACATTC 58.946 40.000 30.27 4.38 42.42 2.67
1345 1400 4.543590 ATGTCCCTGTCTTACTGACTTG 57.456 45.455 0.00 0.00 45.54 3.16
1370 1425 3.985279 TCTGTCGGTAGAACACAAAATCG 59.015 43.478 0.00 0.00 0.00 3.34
1415 1470 1.204146 TGCATCCTAACTCCCAGTCC 58.796 55.000 0.00 0.00 0.00 3.85
1417 1472 4.322057 AAAATGCATCCTAACTCCCAGT 57.678 40.909 0.00 0.00 0.00 4.00
1418 1473 4.706476 TGAAAAATGCATCCTAACTCCCAG 59.294 41.667 0.00 0.00 0.00 4.45
1419 1474 4.671831 TGAAAAATGCATCCTAACTCCCA 58.328 39.130 0.00 0.00 0.00 4.37
1422 1477 7.765307 TCAAGATGAAAAATGCATCCTAACTC 58.235 34.615 0.00 0.00 42.36 3.01
1423 1478 7.707624 TCAAGATGAAAAATGCATCCTAACT 57.292 32.000 0.00 0.00 42.36 2.24
1425 1480 9.590451 GAAATCAAGATGAAAAATGCATCCTAA 57.410 29.630 0.00 0.00 42.36 2.69
1426 1481 8.751242 TGAAATCAAGATGAAAAATGCATCCTA 58.249 29.630 0.00 0.00 42.36 2.94
1427 1482 7.617225 TGAAATCAAGATGAAAAATGCATCCT 58.383 30.769 0.00 0.00 42.36 3.24
1428 1483 7.548075 ACTGAAATCAAGATGAAAAATGCATCC 59.452 33.333 0.00 0.00 42.36 3.51
1429 1484 8.380644 CACTGAAATCAAGATGAAAAATGCATC 58.619 33.333 0.00 0.00 41.85 3.91
1430 1485 7.148474 GCACTGAAATCAAGATGAAAAATGCAT 60.148 33.333 0.00 0.00 0.00 3.96
1431 1486 6.146510 GCACTGAAATCAAGATGAAAAATGCA 59.853 34.615 0.00 0.00 0.00 3.96
1432 1487 6.367969 AGCACTGAAATCAAGATGAAAAATGC 59.632 34.615 0.00 0.00 0.00 3.56
1433 1488 7.884816 AGCACTGAAATCAAGATGAAAAATG 57.115 32.000 0.00 0.00 0.00 2.32
1434 1489 7.601508 GGAAGCACTGAAATCAAGATGAAAAAT 59.398 33.333 0.00 0.00 0.00 1.82
1435 1490 6.925165 GGAAGCACTGAAATCAAGATGAAAAA 59.075 34.615 0.00 0.00 0.00 1.94
1436 1491 6.266103 AGGAAGCACTGAAATCAAGATGAAAA 59.734 34.615 0.00 0.00 0.00 2.29
1437 1492 5.771666 AGGAAGCACTGAAATCAAGATGAAA 59.228 36.000 0.00 0.00 0.00 2.69
1460 1515 2.654987 GAACGCAGCAAGAAAGGAAAG 58.345 47.619 0.00 0.00 0.00 2.62
1486 1542 6.309494 CACAACTTTAAGGCATCACAATCATG 59.691 38.462 0.00 0.00 0.00 3.07
1519 1575 2.030412 TACTGCGCCACACACCAG 59.970 61.111 4.18 0.00 0.00 4.00
1700 1756 3.058293 TGCTAAAATTCAGTCAACAGCCG 60.058 43.478 0.00 0.00 0.00 5.52
1718 1775 4.890158 TTCACAGTCTCCAGAAATGCTA 57.110 40.909 0.00 0.00 0.00 3.49
1907 1965 0.696501 TACCTGGCAAACCTTCTCCC 59.303 55.000 0.00 0.00 36.63 4.30
1938 1996 8.906867 CCATTCACAAAACAATCAGATATAGGT 58.093 33.333 0.00 0.00 0.00 3.08
1978 2036 1.473257 GCAGAGCATTGACGTCCCATA 60.473 52.381 14.12 0.00 0.00 2.74
1997 2055 1.971695 CCCCAAACCTCCAAGACGC 60.972 63.158 0.00 0.00 0.00 5.19
1998 2056 0.109723 TTCCCCAAACCTCCAAGACG 59.890 55.000 0.00 0.00 0.00 4.18
2044 2104 2.862541 TGGCAAGCTAGAAGAAAGCAA 58.137 42.857 0.00 0.00 42.62 3.91
2053 2113 6.490040 ACTTTTCAAGTAATTGGCAAGCTAGA 59.510 34.615 5.96 0.00 40.69 2.43
2106 2166 2.608261 GCAGCATCGGTAGGTAGATCAC 60.608 54.545 0.00 0.00 0.00 3.06
2108 2168 1.889829 AGCAGCATCGGTAGGTAGATC 59.110 52.381 0.00 0.00 0.00 2.75
2115 2175 4.746361 CTCCAGCAGCATCGGTAG 57.254 61.111 0.00 0.00 0.00 3.18
2153 2213 4.204891 GCACCGATACGCGCACAC 62.205 66.667 5.73 0.00 39.11 3.82
2243 2303 1.203288 AGGGAAATTTGGGGTGCATCA 60.203 47.619 0.00 0.00 0.00 3.07
2469 2529 1.148310 CAACGACAGCTCCGATTGTT 58.852 50.000 11.50 0.00 0.00 2.83
2475 2535 3.883744 AAGCCCAACGACAGCTCCG 62.884 63.158 3.71 3.71 35.30 4.63
2476 2536 2.032681 AAGCCCAACGACAGCTCC 59.967 61.111 0.00 0.00 35.30 4.70
2484 2544 2.192861 TTGCCACAGAAGCCCAACG 61.193 57.895 0.00 0.00 0.00 4.10
2495 2555 1.887242 GCGTGAGAGTGTTGCCACA 60.887 57.895 0.00 0.00 44.39 4.17
2505 2565 1.662629 CAGTAATGGCAAGCGTGAGAG 59.337 52.381 2.99 0.00 0.00 3.20
2506 2566 1.675714 CCAGTAATGGCAAGCGTGAGA 60.676 52.381 2.99 0.00 0.00 3.27
2524 2584 5.046591 TCACAACAACACAAAATTAACCCCA 60.047 36.000 0.00 0.00 0.00 4.96
2534 2594 7.872993 TGAACCTAATTTTCACAACAACACAAA 59.127 29.630 0.00 0.00 0.00 2.83
2539 2599 7.595130 GGATCTGAACCTAATTTTCACAACAAC 59.405 37.037 0.00 0.00 0.00 3.32
2540 2600 7.286546 TGGATCTGAACCTAATTTTCACAACAA 59.713 33.333 5.52 0.00 0.00 2.83
2541 2601 6.775142 TGGATCTGAACCTAATTTTCACAACA 59.225 34.615 5.52 0.00 0.00 3.33
2582 2645 6.806668 TCATAACTACTGATCCCATTGTCA 57.193 37.500 0.00 0.00 0.00 3.58
2645 2708 8.501580 CATCAGCAAACTATATATTGGACAGTG 58.498 37.037 0.00 0.00 0.00 3.66
2646 2709 7.173907 GCATCAGCAAACTATATATTGGACAGT 59.826 37.037 0.00 0.00 41.58 3.55
2652 2715 8.320396 AGTCAGCATCAGCAAACTATATATTG 57.680 34.615 0.00 0.00 45.49 1.90
2658 2721 6.259608 GTCATTAGTCAGCATCAGCAAACTAT 59.740 38.462 0.00 0.00 45.49 2.12
2660 2723 4.394300 GTCATTAGTCAGCATCAGCAAACT 59.606 41.667 0.00 0.00 45.49 2.66
2671 2734 4.092091 GCACAACAGTAGTCATTAGTCAGC 59.908 45.833 0.00 0.00 0.00 4.26
2672 2735 5.347093 CAGCACAACAGTAGTCATTAGTCAG 59.653 44.000 0.00 0.00 0.00 3.51
2679 2742 2.037641 TGCTCAGCACAACAGTAGTCAT 59.962 45.455 0.00 0.00 31.71 3.06
2681 2744 2.064762 CTGCTCAGCACAACAGTAGTC 58.935 52.381 0.00 0.00 33.79 2.59
2820 2883 9.585369 TGAAATACAGGATGCATATTGGAAATA 57.415 29.630 0.00 0.00 42.53 1.40
2893 2956 8.506083 ACATCCTAAAAGATATGTCCAAGGAAT 58.494 33.333 0.00 0.00 35.63 3.01
2912 2975 5.640147 AGGAAAATTGGTCACAACATCCTA 58.360 37.500 8.07 0.00 41.07 2.94
3252 3315 5.125578 GGAAGGTATAAGGGAAAAACAGCAG 59.874 44.000 0.00 0.00 0.00 4.24
3258 3321 7.013834 ACACAATGGAAGGTATAAGGGAAAAA 58.986 34.615 0.00 0.00 0.00 1.94
3411 3474 7.814107 GCTGTCATGATTTCACAAAATCCTAAA 59.186 33.333 0.00 0.00 46.84 1.85
3419 3482 5.771153 TTGAGCTGTCATGATTTCACAAA 57.229 34.783 0.00 0.00 30.85 2.83
3427 3490 6.153851 TCAAATTTGGATTGAGCTGTCATGAT 59.846 34.615 17.90 0.00 33.15 2.45
3429 3492 5.716094 TCAAATTTGGATTGAGCTGTCATG 58.284 37.500 17.90 0.00 33.15 3.07
3433 3496 5.988310 TCATCAAATTTGGATTGAGCTGT 57.012 34.783 17.90 0.00 39.92 4.40
3480 3543 4.403734 ACATAATGACAACCCCGAAAACT 58.596 39.130 0.00 0.00 0.00 2.66
3513 3576 9.474920 GGATTGTTATGAATTGTCAGACAAAAA 57.525 29.630 19.92 8.94 41.96 1.94
3606 3672 6.371595 AATCAAGCCCCACAAAAATTATCA 57.628 33.333 0.00 0.00 0.00 2.15
3649 3715 7.643569 ACATGTACATGATTCAAAGGCATAA 57.356 32.000 36.36 0.00 41.20 1.90
3656 3722 7.619965 TGGAGTCTACATGTACATGATTCAAA 58.380 34.615 36.36 15.66 41.20 2.69
3681 3747 1.485066 CTACCGGCATCAGGGTAGTTT 59.515 52.381 0.00 0.00 46.92 2.66
3696 3762 0.744414 CAATGTCCCAGCACCTACCG 60.744 60.000 0.00 0.00 0.00 4.02
3700 3766 1.075482 CCACAATGTCCCAGCACCT 59.925 57.895 0.00 0.00 0.00 4.00
3784 3850 8.523915 TTAAAGAACATCATGCATACCTCATT 57.476 30.769 0.00 0.00 0.00 2.57
4001 4067 6.072508 GGCAAATGTTGAGATCTAGTGAACAA 60.073 38.462 0.00 0.00 30.75 2.83
4063 4129 0.453793 CACGCTTCCAACAACCAACA 59.546 50.000 0.00 0.00 0.00 3.33
4233 4299 1.813786 ACAGTAGGAACAGCTCGAGAC 59.186 52.381 18.75 7.74 0.00 3.36
4246 4312 4.521130 TCTAACAGTTCTGCACAGTAGG 57.479 45.455 0.00 0.00 0.00 3.18
4303 4369 7.732025 TGGAATCCGATAGTTAATAGCTCAAA 58.268 34.615 0.00 0.00 0.00 2.69
4341 4407 2.248487 CTCGCTGTAGTTGTTCCGTAC 58.752 52.381 0.00 0.00 0.00 3.67
4398 4465 8.035394 TCAGTGTTTCATATTTGTAGTCTCCTC 58.965 37.037 0.00 0.00 0.00 3.71
4657 4725 9.543783 CCCTGGATAGTATTACTCTTTTAACAC 57.456 37.037 0.00 0.00 0.00 3.32
4658 4726 9.496710 TCCCTGGATAGTATTACTCTTTTAACA 57.503 33.333 0.00 0.00 0.00 2.41
4661 4729 8.921205 GTGTCCCTGGATAGTATTACTCTTTTA 58.079 37.037 0.00 0.00 0.00 1.52
4662 4730 7.624077 AGTGTCCCTGGATAGTATTACTCTTTT 59.376 37.037 0.00 0.00 0.00 2.27
4767 4836 3.521126 AGTCTGCCACCAAGTATCTGATT 59.479 43.478 0.00 0.00 0.00 2.57
4839 4908 8.776376 TTTATCTCCCATGAAAAAGAAATTGC 57.224 30.769 0.00 0.00 0.00 3.56
4953 5023 4.986659 CCAAAGAAAGGAAATGTTGCAGAG 59.013 41.667 0.00 0.00 0.00 3.35
5013 5083 7.859377 GTGTTAGAGAAAATGCATGGTCATATG 59.141 37.037 0.00 0.00 0.00 1.78
5014 5084 7.776969 AGTGTTAGAGAAAATGCATGGTCATAT 59.223 33.333 0.00 0.00 0.00 1.78
5015 5085 7.112122 AGTGTTAGAGAAAATGCATGGTCATA 58.888 34.615 0.00 0.00 0.00 2.15
5016 5086 5.948162 AGTGTTAGAGAAAATGCATGGTCAT 59.052 36.000 0.00 0.00 0.00 3.06
5017 5087 5.316167 AGTGTTAGAGAAAATGCATGGTCA 58.684 37.500 0.00 0.00 0.00 4.02
5019 5089 5.564550 AGAGTGTTAGAGAAAATGCATGGT 58.435 37.500 0.00 0.00 0.00 3.55
5031 5101 8.607459 CCATACAAATAGCAAAGAGTGTTAGAG 58.393 37.037 0.00 0.00 0.00 2.43
5037 5107 8.511321 TGTAAACCATACAAATAGCAAAGAGTG 58.489 33.333 0.00 0.00 0.00 3.51
5042 5112 6.623986 CGGCTGTAAACCATACAAATAGCAAA 60.624 38.462 0.00 0.00 0.00 3.68
5045 5115 4.261031 CCGGCTGTAAACCATACAAATAGC 60.261 45.833 0.00 0.00 0.00 2.97
5055 5125 1.202830 ACAATGACCGGCTGTAAACCA 60.203 47.619 0.00 0.00 0.00 3.67
5220 5290 1.174078 TGCTGCAACCATCACCAGTG 61.174 55.000 0.00 0.00 0.00 3.66
5253 5323 7.888021 TCTCATAACATGTTTGGTGGAAATACT 59.112 33.333 17.78 0.00 0.00 2.12
5254 5324 8.050778 TCTCATAACATGTTTGGTGGAAATAC 57.949 34.615 17.78 0.00 0.00 1.89
5263 5333 6.558009 CACTTGGATCTCATAACATGTTTGG 58.442 40.000 17.78 9.50 0.00 3.28
5267 5337 4.847198 TGCACTTGGATCTCATAACATGT 58.153 39.130 0.00 0.00 0.00 3.21
5268 5338 6.387041 AATGCACTTGGATCTCATAACATG 57.613 37.500 0.00 0.00 0.00 3.21
5269 5339 6.604396 TGAAATGCACTTGGATCTCATAACAT 59.396 34.615 0.00 0.00 0.00 2.71
5270 5340 5.945191 TGAAATGCACTTGGATCTCATAACA 59.055 36.000 0.00 0.00 0.00 2.41
5272 5342 6.182627 ACTGAAATGCACTTGGATCTCATAA 58.817 36.000 0.00 0.00 0.00 1.90
5273 5343 5.748402 ACTGAAATGCACTTGGATCTCATA 58.252 37.500 0.00 0.00 0.00 2.15
5286 5356 2.879002 TTGCGGAAAACTGAAATGCA 57.121 40.000 0.00 0.00 0.00 3.96
5288 5358 4.324402 GCTGTATTGCGGAAAACTGAAATG 59.676 41.667 0.00 0.00 0.00 2.32
5300 5370 3.444703 AGAGAAGTAGCTGTATTGCGG 57.555 47.619 0.00 0.00 38.13 5.69
5308 5378 7.375053 ACTGTTTAGAGAAAGAGAAGTAGCTG 58.625 38.462 0.00 0.00 38.01 4.24
5313 5383 8.204836 TGCTAAACTGTTTAGAGAAAGAGAAGT 58.795 33.333 33.32 0.72 44.19 3.01
5314 5384 8.594881 TGCTAAACTGTTTAGAGAAAGAGAAG 57.405 34.615 33.32 13.53 44.19 2.85
5315 5385 8.958119 TTGCTAAACTGTTTAGAGAAAGAGAA 57.042 30.769 33.32 14.78 44.19 2.87
5316 5386 8.958119 TTTGCTAAACTGTTTAGAGAAAGAGA 57.042 30.769 33.32 13.83 44.19 3.10
5343 5413 8.597167 CATCCTTGTCCCTGAGATAAACATATA 58.403 37.037 0.00 0.00 0.00 0.86
5348 5418 4.080299 ACCATCCTTGTCCCTGAGATAAAC 60.080 45.833 0.00 0.00 0.00 2.01
5351 5421 3.421394 ACCATCCTTGTCCCTGAGATA 57.579 47.619 0.00 0.00 0.00 1.98
5354 5424 2.092914 GGTAACCATCCTTGTCCCTGAG 60.093 54.545 0.00 0.00 0.00 3.35
5365 5435 2.238898 AGTAAGCCAGTGGTAACCATCC 59.761 50.000 11.74 0.00 35.28 3.51
5470 5540 9.672086 GTTGTAGTATAACAATTTGCAACAGAA 57.328 29.630 0.00 0.00 41.18 3.02
5471 5541 9.062524 AGTTGTAGTATAACAATTTGCAACAGA 57.937 29.630 11.77 0.00 41.18 3.41
5489 5559 5.853936 TGTGCAAGATAACTCAGTTGTAGT 58.146 37.500 0.00 0.00 0.00 2.73
5520 5590 1.670811 CCAATTCGATGCCCACTACAC 59.329 52.381 0.00 0.00 0.00 2.90
5622 5692 6.954684 GGAGGATAGATAAAGTATCAGTGGGA 59.045 42.308 0.00 0.00 37.65 4.37
5628 5698 6.875469 ACAGGGGAGGATAGATAAAGTATCA 58.125 40.000 0.00 0.00 37.65 2.15
5636 5706 4.292571 CAGGAGTACAGGGGAGGATAGATA 59.707 50.000 0.00 0.00 0.00 1.98
5642 5712 1.690010 TACAGGAGTACAGGGGAGGA 58.310 55.000 0.00 0.00 0.00 3.71
5646 5716 4.837093 TGAAAATACAGGAGTACAGGGG 57.163 45.455 0.00 0.00 31.96 4.79
5652 5722 7.206789 TGATGGGATTGAAAATACAGGAGTA 57.793 36.000 0.00 0.00 34.10 2.59
5656 5726 6.720112 ACATGATGGGATTGAAAATACAGG 57.280 37.500 0.00 0.00 0.00 4.00
5667 5740 6.313519 ACAAGTACTGTACATGATGGGATT 57.686 37.500 24.84 4.28 36.10 3.01
5685 5758 8.565896 TTGAAGCAGATAATATGACAACAAGT 57.434 30.769 0.00 0.00 0.00 3.16
5729 5802 0.320771 CCTGACCTTTGACCTGACGG 60.321 60.000 0.00 0.00 0.00 4.79
5731 5804 1.056660 TCCCTGACCTTTGACCTGAC 58.943 55.000 0.00 0.00 0.00 3.51
5817 5890 0.468226 ACCTGAGTGCGGACTTTTGA 59.532 50.000 12.08 0.00 30.16 2.69
5909 5982 1.957186 GGTCGCACACGTAAAGGCA 60.957 57.895 0.00 0.00 41.18 4.75
5918 5991 1.017177 TTAAGCATCGGGTCGCACAC 61.017 55.000 0.00 0.00 0.00 3.82
5926 6005 7.479980 TGAATAGACAAATTTTAAGCATCGGG 58.520 34.615 0.00 0.00 0.00 5.14
5995 6074 2.371841 AGCTGGTGAAGTGGTGATTGTA 59.628 45.455 0.00 0.00 0.00 2.41
5997 6076 1.901591 AGCTGGTGAAGTGGTGATTG 58.098 50.000 0.00 0.00 0.00 2.67
6000 6079 4.469586 TGATAATAGCTGGTGAAGTGGTGA 59.530 41.667 0.00 0.00 0.00 4.02
6001 6080 4.572389 GTGATAATAGCTGGTGAAGTGGTG 59.428 45.833 0.00 0.00 0.00 4.17
6022 6129 0.888619 TCTGAACTACAGGCCTCGTG 59.111 55.000 0.00 0.00 45.76 4.35
6067 6177 5.363562 TGGAGCATGTTCATCTGACTAAT 57.636 39.130 11.93 0.00 0.00 1.73
6068 6178 4.383444 CCTGGAGCATGTTCATCTGACTAA 60.383 45.833 11.93 0.00 0.00 2.24
6069 6179 3.133542 CCTGGAGCATGTTCATCTGACTA 59.866 47.826 11.93 0.00 0.00 2.59
6070 6180 2.093075 CCTGGAGCATGTTCATCTGACT 60.093 50.000 11.93 0.00 0.00 3.41
6071 6181 2.286872 CCTGGAGCATGTTCATCTGAC 58.713 52.381 11.93 0.00 0.00 3.51
6072 6182 1.407851 GCCTGGAGCATGTTCATCTGA 60.408 52.381 11.93 0.00 42.97 3.27
6091 6202 3.303395 GCCAACATAAGATTGACGCTAGC 60.303 47.826 4.06 4.06 0.00 3.42
6135 6250 2.739913 CTGGATTTGCCTGCATGTTTTG 59.260 45.455 0.00 0.00 37.63 2.44
6164 6279 6.151817 GGAGCTCAGTTGATAAGGATGTTTTT 59.848 38.462 17.19 0.00 0.00 1.94
6165 6280 5.649831 GGAGCTCAGTTGATAAGGATGTTTT 59.350 40.000 17.19 0.00 0.00 2.43
6166 6281 5.045286 AGGAGCTCAGTTGATAAGGATGTTT 60.045 40.000 17.19 0.00 0.00 2.83
6167 6282 4.472833 AGGAGCTCAGTTGATAAGGATGTT 59.527 41.667 17.19 0.00 0.00 2.71
6168 6283 4.036518 AGGAGCTCAGTTGATAAGGATGT 58.963 43.478 17.19 0.00 0.00 3.06
6169 6284 4.686191 AGGAGCTCAGTTGATAAGGATG 57.314 45.455 17.19 0.00 0.00 3.51
6170 6285 4.718774 TGAAGGAGCTCAGTTGATAAGGAT 59.281 41.667 17.19 0.00 0.00 3.24
6171 6286 4.096681 TGAAGGAGCTCAGTTGATAAGGA 58.903 43.478 17.19 0.00 0.00 3.36
6172 6287 4.478206 TGAAGGAGCTCAGTTGATAAGG 57.522 45.455 17.19 0.00 0.00 2.69
6173 6288 5.220815 GCATTGAAGGAGCTCAGTTGATAAG 60.221 44.000 17.19 0.00 0.00 1.73
6174 6289 4.637534 GCATTGAAGGAGCTCAGTTGATAA 59.362 41.667 17.19 1.47 0.00 1.75
6175 6290 4.080695 AGCATTGAAGGAGCTCAGTTGATA 60.081 41.667 17.19 0.00 32.05 2.15
6176 6291 3.015327 GCATTGAAGGAGCTCAGTTGAT 58.985 45.455 17.19 0.62 0.00 2.57
6177 6292 2.039480 AGCATTGAAGGAGCTCAGTTGA 59.961 45.455 17.19 0.00 32.05 3.18
6199 6314 3.144657 TGTGAATGACAGGCAACAGAT 57.855 42.857 0.00 0.00 41.41 2.90
6201 6316 2.555325 ACATGTGAATGACAGGCAACAG 59.445 45.455 0.00 0.00 40.14 3.16
6204 6319 4.669206 AAAACATGTGAATGACAGGCAA 57.331 36.364 0.00 0.00 40.14 4.52
6230 6346 1.443407 CCCGATCTAGCACACAGGG 59.557 63.158 0.00 0.00 0.00 4.45
6235 6351 0.546122 AAATGCCCCGATCTAGCACA 59.454 50.000 3.64 0.00 39.77 4.57
6240 6356 0.819259 GCTGCAAATGCCCCGATCTA 60.819 55.000 2.46 0.00 41.18 1.98
6341 6457 1.592400 GCTCATCCAGCTGCTTTGCA 61.592 55.000 8.66 0.00 45.83 4.08
6356 6472 1.226974 GCTTATGTCGCCGAGCTCA 60.227 57.895 15.40 0.00 32.54 4.26
6410 6526 1.066215 TCCTAGCAATCTTTGAGCGCA 60.066 47.619 11.47 0.00 0.00 6.09
6491 6608 6.635030 AAGGAGACCAATGAACACTAAAAC 57.365 37.500 0.00 0.00 0.00 2.43
6504 6621 4.651503 TGCACCAATTAAAAAGGAGACCAA 59.348 37.500 0.00 0.00 0.00 3.67
6513 6630 7.989741 TCAGGAGAAAATTGCACCAATTAAAAA 59.010 29.630 3.86 0.00 42.32 1.94
6521 6638 2.517959 CCTCAGGAGAAAATTGCACCA 58.482 47.619 0.00 0.00 0.00 4.17
6522 6639 1.203287 GCCTCAGGAGAAAATTGCACC 59.797 52.381 0.00 0.00 0.00 5.01
6548 6665 2.960819 ACATTACACCTCGCTTCAGTC 58.039 47.619 0.00 0.00 0.00 3.51
6558 6676 6.875972 AGGAGAGAACATTACATTACACCT 57.124 37.500 0.00 0.00 0.00 4.00
6583 6701 6.364706 CACAAGTTTACAAAAGTGAAGCACAA 59.635 34.615 0.00 0.00 36.74 3.33
6587 6705 6.322491 AGACACAAGTTTACAAAAGTGAAGC 58.678 36.000 0.00 0.00 0.00 3.86
6588 6706 7.481798 GTGAGACACAAGTTTACAAAAGTGAAG 59.518 37.037 0.00 0.00 34.08 3.02
6610 6728 3.243101 ACGCAACTCTACGGATATGTGAG 60.243 47.826 0.00 0.00 0.00 3.51
6629 6747 2.731217 GGCCAATCAATACATTCACGC 58.269 47.619 0.00 0.00 0.00 5.34
6663 6782 6.748132 ACACAGTTGACATTTCCTTTATTGG 58.252 36.000 0.00 0.00 0.00 3.16
6735 6854 7.012799 AGCCTTGACAAAACAAAAGTTCAAAAA 59.987 29.630 0.00 0.00 0.00 1.94
6736 6855 6.484977 AGCCTTGACAAAACAAAAGTTCAAAA 59.515 30.769 0.00 0.00 0.00 2.44
6737 6856 5.994668 AGCCTTGACAAAACAAAAGTTCAAA 59.005 32.000 0.00 0.00 0.00 2.69
6738 6857 5.407995 CAGCCTTGACAAAACAAAAGTTCAA 59.592 36.000 0.00 0.00 0.00 2.69
6739 6858 4.928615 CAGCCTTGACAAAACAAAAGTTCA 59.071 37.500 0.00 0.00 0.00 3.18
6740 6859 4.329801 CCAGCCTTGACAAAACAAAAGTTC 59.670 41.667 0.00 0.00 0.00 3.01
6741 6860 4.252878 CCAGCCTTGACAAAACAAAAGTT 58.747 39.130 0.00 0.00 0.00 2.66
6742 6861 3.260632 ACCAGCCTTGACAAAACAAAAGT 59.739 39.130 0.00 0.00 0.00 2.66
6743 6862 3.860641 ACCAGCCTTGACAAAACAAAAG 58.139 40.909 0.00 0.00 0.00 2.27
6744 6863 3.513515 AGACCAGCCTTGACAAAACAAAA 59.486 39.130 0.00 0.00 0.00 2.44
6745 6864 3.096092 AGACCAGCCTTGACAAAACAAA 58.904 40.909 0.00 0.00 0.00 2.83
6746 6865 2.733956 AGACCAGCCTTGACAAAACAA 58.266 42.857 0.00 0.00 0.00 2.83
6747 6866 2.435372 AGACCAGCCTTGACAAAACA 57.565 45.000 0.00 0.00 0.00 2.83
6748 6867 4.578928 TCTTTAGACCAGCCTTGACAAAAC 59.421 41.667 0.00 0.00 0.00 2.43
6749 6868 4.787551 TCTTTAGACCAGCCTTGACAAAA 58.212 39.130 0.00 0.00 0.00 2.44
6750 6869 4.431416 TCTTTAGACCAGCCTTGACAAA 57.569 40.909 0.00 0.00 0.00 2.83
6751 6870 4.431416 TTCTTTAGACCAGCCTTGACAA 57.569 40.909 0.00 0.00 0.00 3.18
6752 6871 4.431416 TTTCTTTAGACCAGCCTTGACA 57.569 40.909 0.00 0.00 0.00 3.58
6753 6872 5.278512 CCTTTTTCTTTAGACCAGCCTTGAC 60.279 44.000 0.00 0.00 0.00 3.18
6754 6873 4.827284 CCTTTTTCTTTAGACCAGCCTTGA 59.173 41.667 0.00 0.00 0.00 3.02
6755 6874 4.559502 GCCTTTTTCTTTAGACCAGCCTTG 60.560 45.833 0.00 0.00 0.00 3.61
6756 6875 3.574396 GCCTTTTTCTTTAGACCAGCCTT 59.426 43.478 0.00 0.00 0.00 4.35
6757 6876 3.157881 GCCTTTTTCTTTAGACCAGCCT 58.842 45.455 0.00 0.00 0.00 4.58
6758 6877 2.095212 CGCCTTTTTCTTTAGACCAGCC 60.095 50.000 0.00 0.00 0.00 4.85
6759 6878 2.812011 TCGCCTTTTTCTTTAGACCAGC 59.188 45.455 0.00 0.00 0.00 4.85
6760 6879 4.065789 ACTCGCCTTTTTCTTTAGACCAG 58.934 43.478 0.00 0.00 0.00 4.00
6761 6880 3.813166 CACTCGCCTTTTTCTTTAGACCA 59.187 43.478 0.00 0.00 0.00 4.02
6762 6881 4.062991 TCACTCGCCTTTTTCTTTAGACC 58.937 43.478 0.00 0.00 0.00 3.85
6763 6882 5.864628 ATCACTCGCCTTTTTCTTTAGAC 57.135 39.130 0.00 0.00 0.00 2.59
6764 6883 6.106673 CCTATCACTCGCCTTTTTCTTTAGA 58.893 40.000 0.00 0.00 0.00 2.10
6765 6884 5.220681 GCCTATCACTCGCCTTTTTCTTTAG 60.221 44.000 0.00 0.00 0.00 1.85
6766 6885 4.634443 GCCTATCACTCGCCTTTTTCTTTA 59.366 41.667 0.00 0.00 0.00 1.85
6767 6886 3.440522 GCCTATCACTCGCCTTTTTCTTT 59.559 43.478 0.00 0.00 0.00 2.52
6768 6887 3.010420 GCCTATCACTCGCCTTTTTCTT 58.990 45.455 0.00 0.00 0.00 2.52
6769 6888 2.633488 GCCTATCACTCGCCTTTTTCT 58.367 47.619 0.00 0.00 0.00 2.52
6770 6889 1.327764 CGCCTATCACTCGCCTTTTTC 59.672 52.381 0.00 0.00 0.00 2.29
6771 6890 1.338769 ACGCCTATCACTCGCCTTTTT 60.339 47.619 0.00 0.00 0.00 1.94
6772 6891 0.249398 ACGCCTATCACTCGCCTTTT 59.751 50.000 0.00 0.00 0.00 2.27
6773 6892 0.179108 GACGCCTATCACTCGCCTTT 60.179 55.000 0.00 0.00 0.00 3.11
6774 6893 1.437986 GACGCCTATCACTCGCCTT 59.562 57.895 0.00 0.00 0.00 4.35
6775 6894 2.835705 CGACGCCTATCACTCGCCT 61.836 63.158 0.00 0.00 0.00 5.52
6794 6913 1.061411 GAAATTTCGGCCGGCGTAC 59.939 57.895 27.83 5.60 0.00 3.67
6796 6915 3.795342 CGAAATTTCGGCCGGCGT 61.795 61.111 28.73 8.41 46.30 5.68
6820 6939 2.211353 GGAGTGAATCCTACGTCAGC 57.789 55.000 0.00 0.00 45.64 4.26
6835 6958 4.281182 GGTATCGTGGATCTGTTATGGAGT 59.719 45.833 0.00 0.00 0.00 3.85
6847 6970 2.759355 TGGGAAGAAGGTATCGTGGAT 58.241 47.619 0.00 0.00 0.00 3.41
6848 6971 2.241281 TGGGAAGAAGGTATCGTGGA 57.759 50.000 0.00 0.00 0.00 4.02
6909 7032 2.671070 CTGGGGATGAACAGGCGT 59.329 61.111 0.00 0.00 0.00 5.68
6924 7047 4.899239 GGAGATCACGGGGCGCTG 62.899 72.222 7.64 8.27 0.00 5.18
6928 7051 1.442148 GTACAGGAGATCACGGGGC 59.558 63.158 0.00 0.00 0.00 5.80
6942 7065 4.082523 GGAGCTGGCTGGCGTACA 62.083 66.667 0.00 0.00 37.29 2.90
6943 7066 4.840005 GGGAGCTGGCTGGCGTAC 62.840 72.222 0.00 0.00 37.29 3.67
6971 7094 4.393155 CAGTGGTAGGCAGCGGCA 62.393 66.667 11.88 0.00 43.71 5.69
6977 7100 1.616327 ATGAGGGCAGTGGTAGGCA 60.616 57.895 0.00 0.00 0.00 4.75
6981 7126 2.731571 GGCGATGAGGGCAGTGGTA 61.732 63.158 0.00 0.00 0.00 3.25
6982 7127 4.101448 GGCGATGAGGGCAGTGGT 62.101 66.667 0.00 0.00 0.00 4.16
7044 7190 1.000827 TGTTTTGCTACAATGGCCACG 60.001 47.619 8.16 4.64 0.00 4.94
7069 7215 3.428999 GGCGTTAGATGTGCTTCTAGACA 60.429 47.826 0.00 0.00 30.20 3.41
7082 7228 0.101399 CAGCGACAGAGGCGTTAGAT 59.899 55.000 0.00 0.00 35.00 1.98
7083 7229 1.506718 CAGCGACAGAGGCGTTAGA 59.493 57.895 0.00 0.00 35.00 2.10
7135 7282 3.357079 CGGTGTTGCCAGTCTGCC 61.357 66.667 0.00 0.00 36.97 4.85
7165 7312 1.677217 GGTGACCTTGAGAGATGTGGC 60.677 57.143 0.00 0.00 0.00 5.01
7190 7337 4.557605 CATGGGCGCCGACAATGC 62.558 66.667 22.54 4.79 0.00 3.56
7205 7352 4.202151 GGTGTGAGAAAAAGCTTCAACCAT 60.202 41.667 0.00 0.00 0.00 3.55
7265 7412 1.892474 GGGCAAAGCTACAACCAATGA 59.108 47.619 0.00 0.00 0.00 2.57
7268 7415 0.187361 AGGGGCAAAGCTACAACCAA 59.813 50.000 0.00 0.00 0.00 3.67
7269 7416 1.068948 TAGGGGCAAAGCTACAACCA 58.931 50.000 0.00 0.00 0.00 3.67
7274 7421 2.427095 CAACCAATAGGGGCAAAGCTAC 59.573 50.000 0.00 0.00 42.91 3.58
7275 7422 2.310349 TCAACCAATAGGGGCAAAGCTA 59.690 45.455 0.00 0.00 42.91 3.32
7282 7429 1.852633 AAGCTTCAACCAATAGGGGC 58.147 50.000 0.00 0.00 42.91 5.80
7312 7472 6.072673 AGCGTTCTCAAAATAACCTTCGATTT 60.073 34.615 0.00 0.00 0.00 2.17
7321 7481 3.598246 GTCGCAAGCGTTCTCAAAATAAC 59.402 43.478 14.57 0.00 40.74 1.89
7327 7487 1.295792 AAAGTCGCAAGCGTTCTCAA 58.704 45.000 14.57 0.00 40.74 3.02
7360 7520 1.037493 AAAAGAGTTTCAACCGGGCC 58.963 50.000 6.32 0.00 0.00 5.80
7404 7564 5.163602 ACTGAAAAAGTTGCAACCATTACGA 60.164 36.000 25.62 4.43 34.57 3.43
7405 7565 5.040635 ACTGAAAAAGTTGCAACCATTACG 58.959 37.500 25.62 11.52 34.57 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.