Multiple sequence alignment - TraesCS6D01G361500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G361500 chr6D 100.000 3994 0 0 1 3994 452500200 452496207 0.000000e+00 7376.0
1 TraesCS6D01G361500 chr6D 89.947 1711 131 21 1302 3001 452569775 452571455 0.000000e+00 2169.0
2 TraesCS6D01G361500 chr6D 98.026 152 3 0 1117 1268 452569542 452569693 8.510000e-67 265.0
3 TraesCS6D01G361500 chr6D 100.000 38 0 0 3555 3592 452496529 452496492 1.990000e-08 71.3
4 TraesCS6D01G361500 chr6D 100.000 38 0 0 3672 3709 452496646 452496609 1.990000e-08 71.3
5 TraesCS6D01G361500 chr6B 91.935 2641 141 27 549 3135 687185984 687183362 0.000000e+00 3631.0
6 TraesCS6D01G361500 chr6B 92.110 507 31 4 2641 3139 687243087 687243592 0.000000e+00 706.0
7 TraesCS6D01G361500 chr6B 83.850 613 67 18 2930 3520 687253439 687254041 4.510000e-154 555.0
8 TraesCS6D01G361500 chr6B 89.700 233 19 2 23 253 687186526 687186297 3.900000e-75 292.0
9 TraesCS6D01G361500 chr6B 97.059 34 1 0 3912 3945 687181715 687181682 1.550000e-04 58.4
10 TraesCS6D01G361500 chr6A 91.897 2530 150 30 627 3143 598167162 598164675 0.000000e+00 3485.0
11 TraesCS6D01G361500 chr6A 91.499 447 27 4 1 440 598167767 598167325 4.420000e-169 604.0
12 TraesCS6D01G361500 chr6A 86.620 142 8 6 498 629 598167326 598167186 3.220000e-31 147.0
13 TraesCS6D01G361500 chr3A 79.725 291 57 2 1829 2118 690897215 690897504 4.040000e-50 209.0
14 TraesCS6D01G361500 chr3A 100.000 32 0 0 457 488 670654326 670654357 4.310000e-05 60.2
15 TraesCS6D01G361500 chr1A 78.498 293 55 7 1829 2118 109416290 109416003 6.820000e-43 185.0
16 TraesCS6D01G361500 chr5B 75.897 195 43 3 2687 2879 278012986 278012794 3.290000e-16 97.1
17 TraesCS6D01G361500 chr5D 75.385 195 44 3 2687 2879 244625312 244625120 1.530000e-14 91.6
18 TraesCS6D01G361500 chr5D 95.349 43 2 0 457 499 19721101 19721059 7.160000e-08 69.4
19 TraesCS6D01G361500 chr7A 95.455 44 2 0 457 500 617921141 617921184 1.990000e-08 71.3
20 TraesCS6D01G361500 chr7A 95.455 44 2 0 457 500 724188400 724188357 1.990000e-08 71.3
21 TraesCS6D01G361500 chr7A 100.000 32 0 0 457 488 701197755 701197786 4.310000e-05 60.2
22 TraesCS6D01G361500 chr1B 95.455 44 2 0 457 500 668233372 668233329 1.990000e-08 71.3
23 TraesCS6D01G361500 chr1D 95.349 43 2 0 457 499 47714949 47714907 7.160000e-08 69.4
24 TraesCS6D01G361500 chr1D 97.500 40 1 0 457 496 307235485 307235524 7.160000e-08 69.4
25 TraesCS6D01G361500 chr4A 90.909 44 4 0 457 500 192737245 192737288 4.310000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G361500 chr6D 452496207 452500200 3993 True 2506.200000 7376 100.000000 1 3994 3 chr6D.!!$R1 3993
1 TraesCS6D01G361500 chr6D 452569542 452571455 1913 False 1217.000000 2169 93.986500 1117 3001 2 chr6D.!!$F1 1884
2 TraesCS6D01G361500 chr6B 687181682 687186526 4844 True 1327.133333 3631 92.898000 23 3945 3 chr6B.!!$R1 3922
3 TraesCS6D01G361500 chr6B 687243087 687243592 505 False 706.000000 706 92.110000 2641 3139 1 chr6B.!!$F1 498
4 TraesCS6D01G361500 chr6B 687253439 687254041 602 False 555.000000 555 83.850000 2930 3520 1 chr6B.!!$F2 590
5 TraesCS6D01G361500 chr6A 598164675 598167767 3092 True 1412.000000 3485 90.005333 1 3143 3 chr6A.!!$R1 3142

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
51 53 0.382636 CAAAACAAGACGACGCGGTC 60.383 55.0 12.47 9.46 37.19 4.79 F
1805 2013 0.037303 AGTTGCTGACCCTGTGGATG 59.963 55.0 0.00 0.00 34.81 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1814 2022 0.034477 CTTCCGCCACCCCTACAAAT 60.034 55.0 0.00 0.0 0.00 2.32 R
3533 4143 0.033228 GAGTCGGCCTCCTCATCATG 59.967 60.0 12.32 0.0 33.79 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 8.023128 ACTTGATCGAATTATGACCAAAACAAG 58.977 33.333 0.00 0.00 35.93 3.16
46 47 4.718858 TTATGACCAAAACAAGACGACG 57.281 40.909 0.00 0.00 0.00 5.12
51 53 0.382636 CAAAACAAGACGACGCGGTC 60.383 55.000 12.47 9.46 37.19 4.79
117 121 1.926511 CTGAGCCGTGTTTCCCATGC 61.927 60.000 0.00 0.00 0.00 4.06
257 285 2.007608 GGTAATTGCTGAAGTCGGACC 58.992 52.381 4.14 0.00 0.00 4.46
340 401 5.778161 TCAACACATACATAGAGCAAACG 57.222 39.130 0.00 0.00 0.00 3.60
347 408 2.139917 ACATAGAGCAAACGCGTGAAA 58.860 42.857 14.98 0.00 0.00 2.69
361 424 8.589629 CAAACGCGTGAAACTATAGTAAACTAT 58.410 33.333 14.98 7.72 41.65 2.12
430 493 2.866762 GGACGTAATCTCTTGGACATGC 59.133 50.000 0.00 0.00 0.00 4.06
437 500 5.543507 AATCTCTTGGACATGCTACTAGG 57.456 43.478 0.00 0.00 0.00 3.02
440 503 4.888239 TCTCTTGGACATGCTACTAGGTAC 59.112 45.833 0.00 0.00 0.00 3.34
441 504 4.868268 TCTTGGACATGCTACTAGGTACT 58.132 43.478 0.00 0.00 46.37 2.73
442 505 4.888239 TCTTGGACATGCTACTAGGTACTC 59.112 45.833 0.00 0.00 41.75 2.59
443 506 3.563223 TGGACATGCTACTAGGTACTCC 58.437 50.000 0.00 0.00 41.75 3.85
445 508 4.216708 GGACATGCTACTAGGTACTCCTT 58.783 47.826 0.00 0.00 42.12 3.36
446 509 4.650131 GGACATGCTACTAGGTACTCCTTT 59.350 45.833 0.00 0.00 42.12 3.11
447 510 5.128991 GGACATGCTACTAGGTACTCCTTTT 59.871 44.000 0.00 0.00 42.12 2.27
448 511 5.978814 ACATGCTACTAGGTACTCCTTTTG 58.021 41.667 0.00 0.00 42.12 2.44
449 512 5.484290 ACATGCTACTAGGTACTCCTTTTGT 59.516 40.000 0.00 0.00 42.12 2.83
450 513 5.656213 TGCTACTAGGTACTCCTTTTGTC 57.344 43.478 0.00 0.00 42.12 3.18
451 514 4.465305 TGCTACTAGGTACTCCTTTTGTCC 59.535 45.833 0.00 0.00 42.12 4.02
452 515 4.439837 GCTACTAGGTACTCCTTTTGTCCG 60.440 50.000 0.00 0.00 42.12 4.79
453 516 3.771216 ACTAGGTACTCCTTTTGTCCGA 58.229 45.455 0.00 0.00 42.12 4.55
454 517 4.154942 ACTAGGTACTCCTTTTGTCCGAA 58.845 43.478 0.00 0.00 42.12 4.30
455 518 4.590222 ACTAGGTACTCCTTTTGTCCGAAA 59.410 41.667 0.00 0.00 42.12 3.46
456 519 4.426736 AGGTACTCCTTTTGTCCGAAAA 57.573 40.909 0.00 0.00 42.12 2.29
457 520 4.981812 AGGTACTCCTTTTGTCCGAAAAT 58.018 39.130 0.00 0.00 42.12 1.82
458 521 6.117975 AGGTACTCCTTTTGTCCGAAAATA 57.882 37.500 0.00 0.00 42.12 1.40
459 522 5.936372 AGGTACTCCTTTTGTCCGAAAATAC 59.064 40.000 0.00 0.00 42.12 1.89
460 523 5.702209 GGTACTCCTTTTGTCCGAAAATACA 59.298 40.000 0.00 0.00 0.00 2.29
461 524 6.373495 GGTACTCCTTTTGTCCGAAAATACAT 59.627 38.462 0.00 0.00 0.00 2.29
462 525 6.496338 ACTCCTTTTGTCCGAAAATACATC 57.504 37.500 0.00 0.00 0.00 3.06
463 526 5.414765 ACTCCTTTTGTCCGAAAATACATCC 59.585 40.000 0.00 0.00 0.00 3.51
464 527 5.317808 TCCTTTTGTCCGAAAATACATCCA 58.682 37.500 0.00 0.00 0.00 3.41
465 528 5.949354 TCCTTTTGTCCGAAAATACATCCAT 59.051 36.000 0.00 0.00 0.00 3.41
466 529 6.435904 TCCTTTTGTCCGAAAATACATCCATT 59.564 34.615 0.00 0.00 0.00 3.16
467 530 7.039363 TCCTTTTGTCCGAAAATACATCCATTT 60.039 33.333 0.00 0.00 0.00 2.32
468 531 8.247562 CCTTTTGTCCGAAAATACATCCATTTA 58.752 33.333 0.00 0.00 0.00 1.40
469 532 9.632807 CTTTTGTCCGAAAATACATCCATTTAA 57.367 29.630 0.00 0.00 0.00 1.52
470 533 9.632807 TTTTGTCCGAAAATACATCCATTTAAG 57.367 29.630 0.00 0.00 0.00 1.85
471 534 7.328277 TGTCCGAAAATACATCCATTTAAGG 57.672 36.000 0.00 0.00 0.00 2.69
472 535 6.320164 TGTCCGAAAATACATCCATTTAAGGG 59.680 38.462 0.00 0.00 31.11 3.95
473 536 6.544564 GTCCGAAAATACATCCATTTAAGGGA 59.455 38.462 0.00 0.00 39.14 4.20
474 537 6.544564 TCCGAAAATACATCCATTTAAGGGAC 59.455 38.462 0.00 0.00 37.23 4.46
475 538 6.320164 CCGAAAATACATCCATTTAAGGGACA 59.680 38.462 0.00 0.00 37.23 4.02
476 539 7.147983 CCGAAAATACATCCATTTAAGGGACAA 60.148 37.037 0.00 0.00 37.23 3.18
477 540 7.915397 CGAAAATACATCCATTTAAGGGACAAG 59.085 37.037 0.00 0.00 37.23 3.16
478 541 8.664669 AAAATACATCCATTTAAGGGACAAGT 57.335 30.769 0.00 3.19 37.23 3.16
479 542 8.664669 AAATACATCCATTTAAGGGACAAGTT 57.335 30.769 0.00 0.00 37.23 2.66
480 543 8.664669 AATACATCCATTTAAGGGACAAGTTT 57.335 30.769 0.00 0.00 37.23 2.66
481 544 6.994421 ACATCCATTTAAGGGACAAGTTTT 57.006 33.333 0.00 0.00 37.23 2.43
482 545 7.373617 ACATCCATTTAAGGGACAAGTTTTT 57.626 32.000 0.00 0.00 37.23 1.94
523 586 6.573664 TTGGATTGAGTTGTGAACTTATGG 57.426 37.500 0.00 0.00 43.03 2.74
543 616 2.473984 GGTGTGTACTCAGTACGTTTGC 59.526 50.000 10.46 0.00 41.41 3.68
560 643 2.772077 TGCTTTATGCGGTCAACCTA 57.228 45.000 0.00 0.00 46.63 3.08
561 644 3.275617 TGCTTTATGCGGTCAACCTAT 57.724 42.857 0.00 0.00 46.63 2.57
562 645 4.409718 TGCTTTATGCGGTCAACCTATA 57.590 40.909 0.00 0.00 46.63 1.31
616 699 7.152645 ACACATCGTTGAGTAATTGAGTTAGT 58.847 34.615 0.00 0.00 0.00 2.24
851 970 1.794701 CTGTAATAGCGCATGCACGAT 59.205 47.619 19.57 7.03 46.23 3.73
860 979 0.795085 GCATGCACGATCCATCTAGC 59.205 55.000 14.21 0.00 0.00 3.42
873 992 1.409064 CATCTAGCGTCTACCTGCCAA 59.591 52.381 0.00 0.00 0.00 4.52
1060 1193 0.528470 CTTCTTCTTCGCCGTCCTCT 59.472 55.000 0.00 0.00 0.00 3.69
1152 1285 0.038618 ATCTGTGCAACGACACGCTA 60.039 50.000 0.00 0.00 43.74 4.26
1273 1406 4.951715 TCACAATCCACTGGTACGTATACT 59.048 41.667 0.00 0.00 0.00 2.12
1330 1523 9.936759 TTCTTCTTCTTCTTCTTCCTTAATCTC 57.063 33.333 0.00 0.00 0.00 2.75
1335 1528 5.127356 TCTTCTTCTTCCTTAATCTCCGTCC 59.873 44.000 0.00 0.00 0.00 4.79
1556 1763 4.530857 GTCATCCGCCCCAGGTCG 62.531 72.222 0.00 0.00 0.00 4.79
1765 1973 1.546961 ACTCCTCCGATCGACTTGTT 58.453 50.000 18.66 0.00 0.00 2.83
1766 1974 1.473278 ACTCCTCCGATCGACTTGTTC 59.527 52.381 18.66 0.00 0.00 3.18
1771 1979 0.708370 CCGATCGACTTGTTCACACG 59.292 55.000 18.66 0.00 0.00 4.49
1802 2010 0.604780 CTGAGTTGCTGACCCTGTGG 60.605 60.000 0.00 0.00 37.80 4.17
1805 2013 0.037303 AGTTGCTGACCCTGTGGATG 59.963 55.000 0.00 0.00 34.81 3.51
1807 2015 1.782201 TTGCTGACCCTGTGGATGCT 61.782 55.000 0.00 0.00 34.81 3.79
1808 2016 1.451028 GCTGACCCTGTGGATGCTC 60.451 63.158 0.00 0.00 34.81 4.26
1809 2017 1.908340 GCTGACCCTGTGGATGCTCT 61.908 60.000 0.00 0.00 34.81 4.09
1810 2018 0.107800 CTGACCCTGTGGATGCTCTG 60.108 60.000 0.00 0.00 34.81 3.35
1812 2020 0.326264 GACCCTGTGGATGCTCTGTT 59.674 55.000 0.00 0.00 34.81 3.16
1813 2021 1.555075 GACCCTGTGGATGCTCTGTTA 59.445 52.381 0.00 0.00 34.81 2.41
1814 2022 1.985159 ACCCTGTGGATGCTCTGTTAA 59.015 47.619 0.00 0.00 34.81 2.01
1994 2202 4.338539 ACCACAGACGTCGTCGCC 62.339 66.667 19.11 0.00 41.18 5.54
2030 2238 1.423721 CCATCGACGTGCTCATGGTG 61.424 60.000 0.00 0.00 32.49 4.17
2137 2345 1.194781 AGAGGGGTGGTGCAGTACAG 61.195 60.000 0.00 0.00 0.00 2.74
2149 2357 1.886222 GCAGTACAGCAACATCCCCAA 60.886 52.381 5.23 0.00 0.00 4.12
2150 2358 2.086869 CAGTACAGCAACATCCCCAAG 58.913 52.381 0.00 0.00 0.00 3.61
2429 2643 2.284405 TCCTTCCACCTCCCGGAC 60.284 66.667 0.73 0.00 30.29 4.79
2481 2695 4.090057 GCAAGCTCAACGGCGGTC 62.090 66.667 13.24 0.00 37.29 4.79
3081 3661 7.072177 TCTTTCTTGGCACGAAATAATGTAG 57.928 36.000 17.98 6.35 30.75 2.74
3100 3683 5.211973 TGTAGTAGATGATTCTTCCCTGCT 58.788 41.667 0.00 0.00 33.17 4.24
3121 3704 5.880341 GCTTTTCAGCGGAGTATTGTATTT 58.120 37.500 0.00 0.00 35.91 1.40
3173 3758 8.870075 ATATCAAGAAGATACCAATTAAGCCC 57.130 34.615 0.00 0.00 41.81 5.19
3196 3781 1.130749 CATCTCTGCAGCAACAAGAGC 59.869 52.381 9.47 0.00 0.00 4.09
3202 3787 1.070601 TGCAGCAACAAGAGCTAGTCA 59.929 47.619 0.00 0.00 41.14 3.41
3203 3788 2.146342 GCAGCAACAAGAGCTAGTCAA 58.854 47.619 0.00 0.00 41.14 3.18
3204 3789 2.096019 GCAGCAACAAGAGCTAGTCAAC 60.096 50.000 0.00 0.00 41.14 3.18
3205 3790 3.133691 CAGCAACAAGAGCTAGTCAACA 58.866 45.455 0.00 0.00 41.14 3.33
3206 3791 3.059325 CAGCAACAAGAGCTAGTCAACAC 60.059 47.826 0.00 0.00 41.14 3.32
3207 3792 2.872245 GCAACAAGAGCTAGTCAACACA 59.128 45.455 0.00 0.00 0.00 3.72
3208 3793 3.499918 GCAACAAGAGCTAGTCAACACAT 59.500 43.478 0.00 0.00 0.00 3.21
3209 3794 4.377841 GCAACAAGAGCTAGTCAACACATC 60.378 45.833 0.00 0.00 0.00 3.06
3210 3795 3.931578 ACAAGAGCTAGTCAACACATCC 58.068 45.455 0.00 0.00 0.00 3.51
3224 3809 2.097036 CACATCCAGAATGCACACCAT 58.903 47.619 0.00 0.00 39.12 3.55
3228 3813 3.090210 TCCAGAATGCACACCATCAAT 57.910 42.857 0.00 0.00 31.43 2.57
3250 3851 1.164411 CTGTTATCCACGCCAAGCAA 58.836 50.000 0.00 0.00 0.00 3.91
3253 3854 1.135689 GTTATCCACGCCAAGCAACAG 60.136 52.381 0.00 0.00 0.00 3.16
3282 3883 4.346730 ACATCCATTGACAACACATGGAT 58.653 39.130 13.15 13.15 44.71 3.41
3286 3887 3.191162 CCATTGACAACACATGGATTCGT 59.809 43.478 0.00 0.00 37.11 3.85
3289 3890 3.066380 TGACAACACATGGATTCGTGAG 58.934 45.455 0.00 0.00 36.91 3.51
3306 3907 4.024048 TCGTGAGAATGGTTCTTCAAAAGC 60.024 41.667 0.00 0.00 40.87 3.51
3313 3914 2.167487 TGGTTCTTCAAAAGCAACACCC 59.833 45.455 0.00 0.00 33.96 4.61
3314 3915 2.167487 GGTTCTTCAAAAGCAACACCCA 59.833 45.455 0.00 0.00 0.00 4.51
3315 3916 3.186909 GTTCTTCAAAAGCAACACCCAC 58.813 45.455 0.00 0.00 0.00 4.61
3316 3917 2.733956 TCTTCAAAAGCAACACCCACT 58.266 42.857 0.00 0.00 0.00 4.00
3317 3918 3.892284 TCTTCAAAAGCAACACCCACTA 58.108 40.909 0.00 0.00 0.00 2.74
3360 3961 8.797350 TTAGTCTTTAGTGGTATAAAAAGGGC 57.203 34.615 0.00 0.00 31.37 5.19
3362 3963 7.235804 AGTCTTTAGTGGTATAAAAAGGGCAA 58.764 34.615 0.00 0.00 31.37 4.52
3363 3964 7.893833 AGTCTTTAGTGGTATAAAAAGGGCAAT 59.106 33.333 0.00 0.00 31.37 3.56
3364 3965 9.181061 GTCTTTAGTGGTATAAAAAGGGCAATA 57.819 33.333 0.00 0.00 31.37 1.90
3365 3966 9.930158 TCTTTAGTGGTATAAAAAGGGCAATAT 57.070 29.630 0.00 0.00 31.37 1.28
3374 3975 9.825109 GTATAAAAAGGGCAATATAAAAAGGCA 57.175 29.630 0.00 0.00 0.00 4.75
3383 3984 7.990314 GGGCAATATAAAAAGGCAAATAAAGGA 59.010 33.333 0.00 0.00 0.00 3.36
3395 3996 7.053498 AGGCAAATAAAGGAAAACACACAAAT 58.947 30.769 0.00 0.00 0.00 2.32
3405 4006 5.807011 GGAAAACACACAAATCCATAGCATC 59.193 40.000 0.00 0.00 0.00 3.91
3408 4009 6.534475 AACACACAAATCCATAGCATCATT 57.466 33.333 0.00 0.00 0.00 2.57
3430 4031 8.582437 TCATTAGTATACTTAACCATCTTCCCG 58.418 37.037 11.40 0.00 0.00 5.14
3431 4032 5.803237 AGTATACTTAACCATCTTCCCGG 57.197 43.478 0.00 0.00 0.00 5.73
3432 4033 5.214293 AGTATACTTAACCATCTTCCCGGT 58.786 41.667 0.00 0.00 36.98 5.28
3433 4034 6.376248 AGTATACTTAACCATCTTCCCGGTA 58.624 40.000 0.00 0.00 33.17 4.02
3441 4051 2.279741 CATCTTCCCGGTACACATGTG 58.720 52.381 24.25 24.25 0.00 3.21
3495 4105 3.376540 GCACTCCTATCAACGAGATGTC 58.623 50.000 0.00 0.00 37.57 3.06
3525 4135 4.510340 TCGTAAAAGACAGGAAAAGACAGC 59.490 41.667 0.00 0.00 0.00 4.40
3527 4137 5.333416 CGTAAAAGACAGGAAAAGACAGCTC 60.333 44.000 0.00 0.00 0.00 4.09
3528 4138 4.429854 AAAGACAGGAAAAGACAGCTCT 57.570 40.909 0.00 0.00 0.00 4.09
3529 4139 4.429854 AAGACAGGAAAAGACAGCTCTT 57.570 40.909 0.00 0.00 38.49 2.85
3530 4140 4.429854 AGACAGGAAAAGACAGCTCTTT 57.570 40.909 0.00 0.00 46.89 2.52
3531 4141 4.384940 AGACAGGAAAAGACAGCTCTTTC 58.615 43.478 1.78 1.09 44.59 2.62
3532 4142 3.134458 ACAGGAAAAGACAGCTCTTTCG 58.866 45.455 1.78 0.00 44.59 3.46
3533 4143 2.096019 CAGGAAAAGACAGCTCTTTCGC 60.096 50.000 1.78 0.00 44.59 4.70
3534 4144 1.873591 GGAAAAGACAGCTCTTTCGCA 59.126 47.619 1.78 0.00 44.59 5.10
3535 4145 2.485814 GGAAAAGACAGCTCTTTCGCAT 59.514 45.455 1.78 0.00 44.59 4.73
3536 4146 3.486584 GAAAAGACAGCTCTTTCGCATG 58.513 45.455 1.78 0.00 44.59 4.06
3538 4148 2.687700 AGACAGCTCTTTCGCATGAT 57.312 45.000 0.00 0.00 0.00 2.45
3539 4149 2.277969 AGACAGCTCTTTCGCATGATG 58.722 47.619 0.00 0.00 0.00 3.07
3540 4150 2.093816 AGACAGCTCTTTCGCATGATGA 60.094 45.455 0.00 0.00 0.00 2.92
3542 4152 1.598132 CAGCTCTTTCGCATGATGAGG 59.402 52.381 0.00 0.00 0.00 3.86
3543 4153 1.483827 AGCTCTTTCGCATGATGAGGA 59.516 47.619 0.00 0.00 0.00 3.71
3544 4154 1.865970 GCTCTTTCGCATGATGAGGAG 59.134 52.381 0.00 6.51 0.00 3.69
3545 4155 2.481854 CTCTTTCGCATGATGAGGAGG 58.518 52.381 0.00 0.00 0.00 4.30
3546 4156 0.942962 CTTTCGCATGATGAGGAGGC 59.057 55.000 0.00 0.00 0.00 4.70
3548 4158 2.649245 TTCGCATGATGAGGAGGCCG 62.649 60.000 0.00 0.00 0.00 6.13
3551 4161 2.037620 GCATGATGAGGAGGCCGACT 62.038 60.000 0.00 0.00 0.00 4.18
3552 4162 0.033228 CATGATGAGGAGGCCGACTC 59.967 60.000 19.21 19.21 45.84 3.36
3553 4163 0.105760 ATGATGAGGAGGCCGACTCT 60.106 55.000 24.10 13.50 45.83 3.24
3554 4164 0.324738 TGATGAGGAGGCCGACTCTT 60.325 55.000 24.10 19.60 45.83 2.85
3555 4165 0.827368 GATGAGGAGGCCGACTCTTT 59.173 55.000 24.10 14.92 45.83 2.52
3556 4166 0.827368 ATGAGGAGGCCGACTCTTTC 59.173 55.000 24.10 4.53 45.83 2.62
3557 4167 0.251832 TGAGGAGGCCGACTCTTTCT 60.252 55.000 24.10 0.00 45.83 2.52
3559 4169 0.040499 AGGAGGCCGACTCTTTCTCT 59.960 55.000 0.06 0.00 45.83 3.10
3560 4170 0.458260 GGAGGCCGACTCTTTCTCTC 59.542 60.000 0.06 0.00 45.83 3.20
3561 4171 1.470051 GAGGCCGACTCTTTCTCTCT 58.530 55.000 0.00 0.00 43.14 3.10
3562 4172 1.822371 GAGGCCGACTCTTTCTCTCTT 59.178 52.381 0.00 0.00 43.14 2.85
3563 4173 1.822371 AGGCCGACTCTTTCTCTCTTC 59.178 52.381 0.00 0.00 0.00 2.87
3564 4174 1.546476 GGCCGACTCTTTCTCTCTTCA 59.454 52.381 0.00 0.00 0.00 3.02
3565 4175 2.601804 GCCGACTCTTTCTCTCTTCAC 58.398 52.381 0.00 0.00 0.00 3.18
3566 4176 2.029828 GCCGACTCTTTCTCTCTTCACA 60.030 50.000 0.00 0.00 0.00 3.58
3568 4178 3.570559 CGACTCTTTCTCTCTTCACACC 58.429 50.000 0.00 0.00 0.00 4.16
3570 4180 4.321601 CGACTCTTTCTCTCTTCACACCAT 60.322 45.833 0.00 0.00 0.00 3.55
3571 4181 5.546526 GACTCTTTCTCTCTTCACACCATT 58.453 41.667 0.00 0.00 0.00 3.16
3572 4182 5.934781 ACTCTTTCTCTCTTCACACCATTT 58.065 37.500 0.00 0.00 0.00 2.32
3575 4185 6.122277 TCTTTCTCTCTTCACACCATTTGTT 58.878 36.000 0.00 0.00 35.67 2.83
3577 4187 4.780815 TCTCTCTTCACACCATTTGTTGT 58.219 39.130 0.00 0.00 35.67 3.32
3578 4188 5.924356 TCTCTCTTCACACCATTTGTTGTA 58.076 37.500 0.00 0.00 35.67 2.41
3580 4190 4.819630 TCTCTTCACACCATTTGTTGTACC 59.180 41.667 0.00 0.00 35.67 3.34
3581 4191 4.787551 TCTTCACACCATTTGTTGTACCT 58.212 39.130 0.00 0.00 35.67 3.08
3582 4192 5.197451 TCTTCACACCATTTGTTGTACCTT 58.803 37.500 0.00 0.00 35.67 3.50
3584 4194 6.485313 TCTTCACACCATTTGTTGTACCTTAG 59.515 38.462 0.00 0.00 35.67 2.18
3585 4195 5.931294 TCACACCATTTGTTGTACCTTAGA 58.069 37.500 0.00 0.00 35.67 2.10
3586 4196 6.358178 TCACACCATTTGTTGTACCTTAGAA 58.642 36.000 0.00 0.00 35.67 2.10
3588 4198 7.012894 TCACACCATTTGTTGTACCTTAGAAAG 59.987 37.037 0.00 0.00 35.67 2.62
3589 4199 6.149633 CACCATTTGTTGTACCTTAGAAAGC 58.850 40.000 0.00 0.00 0.00 3.51
3590 4200 6.016276 CACCATTTGTTGTACCTTAGAAAGCT 60.016 38.462 0.00 0.00 0.00 3.74
3591 4201 6.549736 ACCATTTGTTGTACCTTAGAAAGCTT 59.450 34.615 0.00 0.00 0.00 3.74
3595 4205 5.676552 TGTTGTACCTTAGAAAGCTTGTGA 58.323 37.500 0.00 0.00 0.00 3.58
3597 4207 6.426937 TGTTGTACCTTAGAAAGCTTGTGATC 59.573 38.462 0.00 0.00 0.00 2.92
3598 4208 6.360370 TGTACCTTAGAAAGCTTGTGATCT 57.640 37.500 0.00 1.05 0.00 2.75
3599 4209 6.769512 TGTACCTTAGAAAGCTTGTGATCTT 58.230 36.000 0.00 0.00 0.00 2.40
3600 4210 7.224297 TGTACCTTAGAAAGCTTGTGATCTTT 58.776 34.615 0.00 0.00 35.44 2.52
3601 4211 6.809630 ACCTTAGAAAGCTTGTGATCTTTC 57.190 37.500 0.00 6.61 45.07 2.62
3605 4215 4.693538 GAAAGCTTGTGATCTTTCTCCC 57.306 45.455 0.00 0.00 42.78 4.30
3606 4216 4.331108 GAAAGCTTGTGATCTTTCTCCCT 58.669 43.478 0.00 0.00 42.78 4.20
3607 4217 5.491982 GAAAGCTTGTGATCTTTCTCCCTA 58.508 41.667 0.00 0.00 42.78 3.53
3608 4218 5.505181 AAGCTTGTGATCTTTCTCCCTAA 57.495 39.130 0.00 0.00 0.00 2.69
3609 4219 5.505181 AGCTTGTGATCTTTCTCCCTAAA 57.495 39.130 0.00 0.00 0.00 1.85
3610 4220 5.495640 AGCTTGTGATCTTTCTCCCTAAAG 58.504 41.667 0.00 0.00 37.73 1.85
3611 4221 4.095632 GCTTGTGATCTTTCTCCCTAAAGC 59.904 45.833 0.00 0.00 36.58 3.51
3612 4222 4.222124 TGTGATCTTTCTCCCTAAAGCC 57.778 45.455 0.00 0.00 36.58 4.35
3613 4223 3.846588 TGTGATCTTTCTCCCTAAAGCCT 59.153 43.478 0.00 0.00 36.58 4.58
3614 4224 4.080863 TGTGATCTTTCTCCCTAAAGCCTC 60.081 45.833 0.00 0.00 36.58 4.70
3616 4226 4.785376 TGATCTTTCTCCCTAAAGCCTCTT 59.215 41.667 0.00 0.00 36.58 2.85
3617 4227 5.251700 TGATCTTTCTCCCTAAAGCCTCTTT 59.748 40.000 0.00 0.00 36.58 2.52
3619 4229 5.953571 TCTTTCTCCCTAAAGCCTCTTTTT 58.046 37.500 0.00 0.00 36.58 1.94
3644 4254 5.431420 TGCGAATCAAGTTAGAAAAAGCA 57.569 34.783 0.00 0.00 0.00 3.91
3645 4255 5.826586 TGCGAATCAAGTTAGAAAAAGCAA 58.173 33.333 0.00 0.00 0.00 3.91
3646 4256 5.914635 TGCGAATCAAGTTAGAAAAAGCAAG 59.085 36.000 0.00 0.00 0.00 4.01
3647 4257 6.142817 GCGAATCAAGTTAGAAAAAGCAAGA 58.857 36.000 0.00 0.00 0.00 3.02
3648 4258 6.636850 GCGAATCAAGTTAGAAAAAGCAAGAA 59.363 34.615 0.00 0.00 0.00 2.52
3649 4259 7.149063 GCGAATCAAGTTAGAAAAAGCAAGAAG 60.149 37.037 0.00 0.00 0.00 2.85
3651 4261 9.392021 GAATCAAGTTAGAAAAAGCAAGAAGAG 57.608 33.333 0.00 0.00 0.00 2.85
3652 4262 8.682936 ATCAAGTTAGAAAAAGCAAGAAGAGA 57.317 30.769 0.00 0.00 0.00 3.10
3653 4263 7.920738 TCAAGTTAGAAAAAGCAAGAAGAGAC 58.079 34.615 0.00 0.00 0.00 3.36
3656 4266 6.261158 AGTTAGAAAAAGCAAGAAGAGACACC 59.739 38.462 0.00 0.00 0.00 4.16
3657 4267 4.786425 AGAAAAAGCAAGAAGAGACACCT 58.214 39.130 0.00 0.00 0.00 4.00
3658 4268 5.930135 AGAAAAAGCAAGAAGAGACACCTA 58.070 37.500 0.00 0.00 0.00 3.08
3659 4269 5.994668 AGAAAAAGCAAGAAGAGACACCTAG 59.005 40.000 0.00 0.00 0.00 3.02
3660 4270 3.326836 AAGCAAGAAGAGACACCTAGC 57.673 47.619 0.00 0.00 0.00 3.42
3661 4271 1.552792 AGCAAGAAGAGACACCTAGCC 59.447 52.381 0.00 0.00 0.00 3.93
3662 4272 1.276421 GCAAGAAGAGACACCTAGCCA 59.724 52.381 0.00 0.00 0.00 4.75
3663 4273 2.289694 GCAAGAAGAGACACCTAGCCAA 60.290 50.000 0.00 0.00 0.00 4.52
3665 4275 4.389374 CAAGAAGAGACACCTAGCCAAAA 58.611 43.478 0.00 0.00 0.00 2.44
3666 4276 4.278975 AGAAGAGACACCTAGCCAAAAG 57.721 45.455 0.00 0.00 0.00 2.27
3667 4277 3.008485 AGAAGAGACACCTAGCCAAAAGG 59.992 47.826 0.00 0.00 40.20 3.11
3668 4278 1.003696 AGAGACACCTAGCCAAAAGGC 59.996 52.381 0.00 0.00 37.67 4.35
3669 4279 0.771127 AGACACCTAGCCAAAAGGCA 59.229 50.000 9.42 0.00 37.67 4.75
3670 4280 1.144913 AGACACCTAGCCAAAAGGCAA 59.855 47.619 9.42 0.00 37.67 4.52
3672 4282 2.562738 GACACCTAGCCAAAAGGCAATT 59.437 45.455 9.42 0.00 37.67 2.32
3673 4283 2.562738 ACACCTAGCCAAAAGGCAATTC 59.437 45.455 9.42 0.00 37.67 2.17
3675 4285 3.092301 ACCTAGCCAAAAGGCAATTCTC 58.908 45.455 9.42 0.00 37.67 2.87
3676 4286 3.245407 ACCTAGCCAAAAGGCAATTCTCT 60.245 43.478 9.42 0.00 37.67 3.10
3678 4288 3.166560 AGCCAAAAGGCAATTCTCTCT 57.833 42.857 9.42 0.00 37.35 3.10
3680 4290 3.509184 AGCCAAAAGGCAATTCTCTCTTC 59.491 43.478 9.42 0.00 37.35 2.87
3681 4291 3.256631 GCCAAAAGGCAATTCTCTCTTCA 59.743 43.478 0.84 0.00 34.62 3.02
3682 4292 4.802999 CCAAAAGGCAATTCTCTCTTCAC 58.197 43.478 0.00 0.00 0.00 3.18
3687 4297 3.009916 AGGCAATTCTCTCTTCACACCAT 59.990 43.478 0.00 0.00 0.00 3.55
3688 4298 3.760684 GGCAATTCTCTCTTCACACCATT 59.239 43.478 0.00 0.00 0.00 3.16
3689 4299 4.219288 GGCAATTCTCTCTTCACACCATTT 59.781 41.667 0.00 0.00 0.00 2.32
3690 4300 5.159209 GCAATTCTCTCTTCACACCATTTG 58.841 41.667 0.00 0.00 0.00 2.32
3691 4301 5.278660 GCAATTCTCTCTTCACACCATTTGT 60.279 40.000 0.00 0.00 39.97 2.83
3692 4302 6.736794 GCAATTCTCTCTTCACACCATTTGTT 60.737 38.462 0.00 0.00 35.67 2.83
3694 4304 4.780815 TCTCTCTTCACACCATTTGTTGT 58.219 39.130 0.00 0.00 35.67 3.32
3696 4306 5.758296 TCTCTCTTCACACCATTTGTTGTAC 59.242 40.000 0.00 0.00 35.67 2.90
3698 4308 4.787551 TCTTCACACCATTTGTTGTACCT 58.212 39.130 0.00 0.00 35.67 3.08
3700 4310 6.358178 TCTTCACACCATTTGTTGTACCTTA 58.642 36.000 0.00 0.00 35.67 2.69
3701 4311 6.485313 TCTTCACACCATTTGTTGTACCTTAG 59.515 38.462 0.00 0.00 35.67 2.18
3702 4312 5.931294 TCACACCATTTGTTGTACCTTAGA 58.069 37.500 0.00 0.00 35.67 2.10
3703 4313 6.358178 TCACACCATTTGTTGTACCTTAGAA 58.642 36.000 0.00 0.00 35.67 2.10
3704 4314 6.829298 TCACACCATTTGTTGTACCTTAGAAA 59.171 34.615 0.00 0.00 35.67 2.52
3706 4316 6.149633 CACCATTTGTTGTACCTTAGAAAGC 58.850 40.000 0.00 0.00 0.00 3.51
3707 4317 6.016276 CACCATTTGTTGTACCTTAGAAAGCT 60.016 38.462 0.00 0.00 0.00 3.74
3715 4583 6.861065 TGTACCTTAGAAAGCTTTCAAGTG 57.139 37.500 34.39 26.14 39.61 3.16
3718 4586 4.036852 ACCTTAGAAAGCTTTCAAGTGTGC 59.963 41.667 34.39 11.42 39.61 4.57
3720 4588 5.450412 CCTTAGAAAGCTTTCAAGTGTGCAA 60.450 40.000 34.39 16.28 39.61 4.08
3723 4591 5.422145 AGAAAGCTTTCAAGTGTGCAAATT 58.578 33.333 34.39 11.61 39.61 1.82
3725 4593 7.041107 AGAAAGCTTTCAAGTGTGCAAATTAA 58.959 30.769 34.39 0.00 39.61 1.40
3726 4594 7.548780 AGAAAGCTTTCAAGTGTGCAAATTAAA 59.451 29.630 34.39 0.00 39.61 1.52
3748 4616 9.528018 TTAAATTTGTTCTGGAAAGTTGATGTC 57.472 29.630 0.00 0.00 0.00 3.06
3749 4617 6.713762 ATTTGTTCTGGAAAGTTGATGTCA 57.286 33.333 0.00 0.00 0.00 3.58
3750 4618 5.499139 TTGTTCTGGAAAGTTGATGTCAC 57.501 39.130 0.00 0.00 0.00 3.67
3752 4620 4.137543 GTTCTGGAAAGTTGATGTCACCT 58.862 43.478 0.00 0.00 0.00 4.00
3753 4621 4.008074 TCTGGAAAGTTGATGTCACCTC 57.992 45.455 0.00 0.00 0.00 3.85
3755 4623 4.136796 CTGGAAAGTTGATGTCACCTCAA 58.863 43.478 0.00 0.00 0.00 3.02
3756 4624 4.136796 TGGAAAGTTGATGTCACCTCAAG 58.863 43.478 0.00 0.00 33.49 3.02
3757 4625 4.141505 TGGAAAGTTGATGTCACCTCAAGA 60.142 41.667 0.00 0.00 33.49 3.02
3758 4626 5.006386 GGAAAGTTGATGTCACCTCAAGAT 58.994 41.667 0.00 0.00 33.49 2.40
3759 4627 5.123027 GGAAAGTTGATGTCACCTCAAGATC 59.877 44.000 0.00 0.00 33.49 2.75
3761 4629 6.611613 AAGTTGATGTCACCTCAAGATCTA 57.388 37.500 0.00 0.00 33.49 1.98
3762 4630 5.971763 AGTTGATGTCACCTCAAGATCTAC 58.028 41.667 0.00 0.00 33.49 2.59
3767 5248 7.119387 TGATGTCACCTCAAGATCTACTTCTA 58.881 38.462 0.00 0.00 36.61 2.10
3775 5256 8.962679 ACCTCAAGATCTACTTCTAGTTAAGTG 58.037 37.037 0.00 0.00 39.95 3.16
3784 5265 5.735766 ACTTCTAGTTAAGTGATCTTGGGC 58.264 41.667 0.00 0.00 38.28 5.36
3785 5266 5.248477 ACTTCTAGTTAAGTGATCTTGGGCA 59.752 40.000 0.00 0.00 38.28 5.36
3786 5267 5.957771 TCTAGTTAAGTGATCTTGGGCAT 57.042 39.130 0.00 0.00 35.36 4.40
3787 5268 6.313519 TCTAGTTAAGTGATCTTGGGCATT 57.686 37.500 0.00 0.00 35.36 3.56
3788 5269 6.349300 TCTAGTTAAGTGATCTTGGGCATTC 58.651 40.000 0.00 0.00 35.36 2.67
3789 5270 4.922206 AGTTAAGTGATCTTGGGCATTCA 58.078 39.130 0.00 0.00 35.36 2.57
3790 5271 4.702131 AGTTAAGTGATCTTGGGCATTCAC 59.298 41.667 0.00 0.00 38.97 3.18
3792 5273 4.574674 AAGTGATCTTGGGCATTCACTA 57.425 40.909 4.98 0.00 45.98 2.74
3793 5274 4.148128 AGTGATCTTGGGCATTCACTAG 57.852 45.455 2.77 0.00 45.14 2.57
3794 5275 3.776969 AGTGATCTTGGGCATTCACTAGA 59.223 43.478 0.00 0.00 45.14 2.43
3796 5277 2.672961 TCTTGGGCATTCACTAGACG 57.327 50.000 0.00 0.00 0.00 4.18
3797 5278 1.899814 TCTTGGGCATTCACTAGACGT 59.100 47.619 0.00 0.00 0.00 4.34
3798 5279 2.002586 CTTGGGCATTCACTAGACGTG 58.997 52.381 0.00 0.00 45.18 4.49
3799 5280 0.249120 TGGGCATTCACTAGACGTGG 59.751 55.000 0.00 0.00 43.94 4.94
3800 5281 1.090052 GGGCATTCACTAGACGTGGC 61.090 60.000 0.00 2.10 43.94 5.01
3801 5282 0.108138 GGCATTCACTAGACGTGGCT 60.108 55.000 0.00 0.00 43.94 4.75
3803 5284 2.224066 GGCATTCACTAGACGTGGCTAT 60.224 50.000 0.00 0.00 43.94 2.97
3804 5285 3.053455 GCATTCACTAGACGTGGCTATC 58.947 50.000 0.00 0.00 43.94 2.08
3805 5286 3.300857 CATTCACTAGACGTGGCTATCG 58.699 50.000 0.00 0.00 43.94 2.92
3806 5287 1.306148 TCACTAGACGTGGCTATCGG 58.694 55.000 0.00 0.00 43.94 4.18
3807 5288 1.134310 TCACTAGACGTGGCTATCGGA 60.134 52.381 0.00 0.00 43.94 4.55
3808 5289 1.264557 CACTAGACGTGGCTATCGGAG 59.735 57.143 0.00 0.00 40.02 4.63
3809 5290 1.140452 ACTAGACGTGGCTATCGGAGA 59.860 52.381 0.00 0.00 45.75 3.71
3810 5291 2.219458 CTAGACGTGGCTATCGGAGAA 58.781 52.381 0.00 0.00 43.58 2.87
3811 5292 1.025812 AGACGTGGCTATCGGAGAAG 58.974 55.000 0.00 0.00 43.58 2.85
3812 5293 1.022735 GACGTGGCTATCGGAGAAGA 58.977 55.000 0.00 0.00 43.58 2.87
3813 5294 1.404391 GACGTGGCTATCGGAGAAGAA 59.596 52.381 0.00 0.00 43.58 2.52
3814 5295 1.405821 ACGTGGCTATCGGAGAAGAAG 59.594 52.381 0.00 0.00 43.58 2.85
3815 5296 1.676529 CGTGGCTATCGGAGAAGAAGA 59.323 52.381 0.00 0.00 43.58 2.87
3816 5297 2.287308 CGTGGCTATCGGAGAAGAAGAG 60.287 54.545 0.00 0.00 43.58 2.85
3817 5298 2.952978 GTGGCTATCGGAGAAGAAGAGA 59.047 50.000 0.00 0.00 43.58 3.10
3818 5299 3.004315 GTGGCTATCGGAGAAGAAGAGAG 59.996 52.174 0.00 0.00 43.58 3.20
3819 5300 3.117851 TGGCTATCGGAGAAGAAGAGAGA 60.118 47.826 0.00 0.00 43.58 3.10
3820 5301 3.252458 GGCTATCGGAGAAGAAGAGAGAC 59.748 52.174 0.00 0.00 43.58 3.36
3821 5302 4.134563 GCTATCGGAGAAGAAGAGAGACT 58.865 47.826 0.00 0.00 43.58 3.24
3822 5303 4.213482 GCTATCGGAGAAGAAGAGAGACTC 59.787 50.000 0.00 0.00 43.58 3.36
3823 5304 2.623535 TCGGAGAAGAAGAGAGACTCG 58.376 52.381 0.00 0.00 35.36 4.18
3824 5305 1.668751 CGGAGAAGAAGAGAGACTCGG 59.331 57.143 0.00 0.00 35.36 4.63
3825 5306 2.718563 GGAGAAGAAGAGAGACTCGGT 58.281 52.381 0.00 0.00 35.36 4.69
3826 5307 2.422127 GGAGAAGAAGAGAGACTCGGTG 59.578 54.545 0.00 0.00 35.36 4.94
3827 5308 3.078837 GAGAAGAAGAGAGACTCGGTGT 58.921 50.000 0.00 0.00 35.36 4.16
3828 5309 3.078837 AGAAGAAGAGAGACTCGGTGTC 58.921 50.000 2.07 2.07 45.67 3.67
3835 5316 2.737376 GACTCGGTGTCGTTGGGC 60.737 66.667 0.00 0.00 35.81 5.36
3836 5317 3.509137 GACTCGGTGTCGTTGGGCA 62.509 63.158 0.00 0.00 35.81 5.36
3837 5318 2.047274 CTCGGTGTCGTTGGGCAT 60.047 61.111 0.00 0.00 37.69 4.40
3838 5319 1.216977 CTCGGTGTCGTTGGGCATA 59.783 57.895 0.00 0.00 37.69 3.14
3839 5320 0.179084 CTCGGTGTCGTTGGGCATAT 60.179 55.000 0.00 0.00 37.69 1.78
3840 5321 0.179094 TCGGTGTCGTTGGGCATATC 60.179 55.000 0.00 0.00 37.69 1.63
3841 5322 0.179084 CGGTGTCGTTGGGCATATCT 60.179 55.000 0.00 0.00 0.00 1.98
3842 5323 1.742411 CGGTGTCGTTGGGCATATCTT 60.742 52.381 0.00 0.00 0.00 2.40
3843 5324 2.365582 GGTGTCGTTGGGCATATCTTT 58.634 47.619 0.00 0.00 0.00 2.52
3844 5325 2.097466 GGTGTCGTTGGGCATATCTTTG 59.903 50.000 0.00 0.00 0.00 2.77
3845 5326 2.747446 GTGTCGTTGGGCATATCTTTGT 59.253 45.455 0.00 0.00 0.00 2.83
3846 5327 2.746904 TGTCGTTGGGCATATCTTTGTG 59.253 45.455 0.00 0.00 0.00 3.33
3847 5328 2.747446 GTCGTTGGGCATATCTTTGTGT 59.253 45.455 0.00 0.00 0.00 3.72
3848 5329 3.190535 GTCGTTGGGCATATCTTTGTGTT 59.809 43.478 0.00 0.00 0.00 3.32
3849 5330 3.438781 TCGTTGGGCATATCTTTGTGTTC 59.561 43.478 0.00 0.00 0.00 3.18
3850 5331 3.427503 CGTTGGGCATATCTTTGTGTTCC 60.428 47.826 0.00 0.00 0.00 3.62
3851 5332 3.448093 TGGGCATATCTTTGTGTTCCA 57.552 42.857 0.00 0.00 0.00 3.53
3852 5333 3.088532 TGGGCATATCTTTGTGTTCCAC 58.911 45.455 0.00 0.00 34.56 4.02
3853 5334 3.245229 TGGGCATATCTTTGTGTTCCACT 60.245 43.478 0.00 0.00 35.11 4.00
3854 5335 3.378427 GGGCATATCTTTGTGTTCCACTC 59.622 47.826 0.00 0.00 35.11 3.51
3855 5336 3.063997 GGCATATCTTTGTGTTCCACTCG 59.936 47.826 0.00 0.00 35.11 4.18
3856 5337 3.684788 GCATATCTTTGTGTTCCACTCGT 59.315 43.478 0.00 0.00 35.11 4.18
3857 5338 4.201724 GCATATCTTTGTGTTCCACTCGTC 60.202 45.833 0.00 0.00 35.11 4.20
3858 5339 3.753294 ATCTTTGTGTTCCACTCGTCT 57.247 42.857 0.00 0.00 35.11 4.18
3859 5340 3.093717 TCTTTGTGTTCCACTCGTCTC 57.906 47.619 0.00 0.00 35.11 3.36
3860 5341 2.693591 TCTTTGTGTTCCACTCGTCTCT 59.306 45.455 0.00 0.00 35.11 3.10
3861 5342 2.795175 TTGTGTTCCACTCGTCTCTC 57.205 50.000 0.00 0.00 35.11 3.20
3862 5343 0.959553 TGTGTTCCACTCGTCTCTCC 59.040 55.000 0.00 0.00 35.11 3.71
3863 5344 0.959553 GTGTTCCACTCGTCTCTCCA 59.040 55.000 0.00 0.00 0.00 3.86
3864 5345 1.340248 GTGTTCCACTCGTCTCTCCAA 59.660 52.381 0.00 0.00 0.00 3.53
3865 5346 1.340248 TGTTCCACTCGTCTCTCCAAC 59.660 52.381 0.00 0.00 0.00 3.77
3866 5347 1.340248 GTTCCACTCGTCTCTCCAACA 59.660 52.381 0.00 0.00 0.00 3.33
3867 5348 1.699730 TCCACTCGTCTCTCCAACAA 58.300 50.000 0.00 0.00 0.00 2.83
3868 5349 2.036387 TCCACTCGTCTCTCCAACAAA 58.964 47.619 0.00 0.00 0.00 2.83
3869 5350 2.135933 CCACTCGTCTCTCCAACAAAC 58.864 52.381 0.00 0.00 0.00 2.93
3870 5351 2.483013 CCACTCGTCTCTCCAACAAACA 60.483 50.000 0.00 0.00 0.00 2.83
3871 5352 3.393800 CACTCGTCTCTCCAACAAACAT 58.606 45.455 0.00 0.00 0.00 2.71
3872 5353 3.185188 CACTCGTCTCTCCAACAAACATG 59.815 47.826 0.00 0.00 0.00 3.21
3873 5354 3.069586 ACTCGTCTCTCCAACAAACATGA 59.930 43.478 0.00 0.00 0.00 3.07
3874 5355 4.058124 CTCGTCTCTCCAACAAACATGAA 58.942 43.478 0.00 0.00 0.00 2.57
3875 5356 4.641396 TCGTCTCTCCAACAAACATGAAT 58.359 39.130 0.00 0.00 0.00 2.57
3876 5357 4.452114 TCGTCTCTCCAACAAACATGAATG 59.548 41.667 0.00 0.00 0.00 2.67
3877 5358 4.214119 CGTCTCTCCAACAAACATGAATGT 59.786 41.667 0.00 0.40 44.20 2.71
3889 5370 4.510038 ACATGAATGTTCAGCCAAGAAC 57.490 40.909 0.00 7.20 46.22 3.01
3908 5389 5.617252 AGAACATTTTCTTACGGAACCTCA 58.383 37.500 0.00 0.00 39.17 3.86
3909 5390 5.701290 AGAACATTTTCTTACGGAACCTCAG 59.299 40.000 0.00 0.00 39.17 3.35
3910 5391 3.751698 ACATTTTCTTACGGAACCTCAGC 59.248 43.478 0.00 0.00 33.13 4.26
3945 5426 4.333649 TGCTCCTGCGATTTCATTAAGAAG 59.666 41.667 0.00 0.00 43.34 2.85
3946 5427 4.572389 GCTCCTGCGATTTCATTAAGAAGA 59.428 41.667 0.00 0.00 37.57 2.87
3947 5428 5.065218 GCTCCTGCGATTTCATTAAGAAGAA 59.935 40.000 0.00 0.00 37.57 2.52
3948 5429 6.668541 TCCTGCGATTTCATTAAGAAGAAG 57.331 37.500 0.00 0.00 37.57 2.85
3949 5430 6.406370 TCCTGCGATTTCATTAAGAAGAAGA 58.594 36.000 0.00 0.00 37.57 2.87
3950 5431 6.536582 TCCTGCGATTTCATTAAGAAGAAGAG 59.463 38.462 0.00 0.00 37.57 2.85
3951 5432 6.536582 CCTGCGATTTCATTAAGAAGAAGAGA 59.463 38.462 0.00 0.00 37.57 3.10
3952 5433 7.254387 CCTGCGATTTCATTAAGAAGAAGAGAG 60.254 40.741 0.00 0.00 37.57 3.20
3953 5434 7.099764 TGCGATTTCATTAAGAAGAAGAGAGT 58.900 34.615 0.00 0.00 37.57 3.24
3954 5435 7.276658 TGCGATTTCATTAAGAAGAAGAGAGTC 59.723 37.037 0.00 0.00 37.57 3.36
3955 5436 7.514435 GCGATTTCATTAAGAAGAAGAGAGTCG 60.514 40.741 0.00 0.00 37.57 4.18
3956 5437 7.043722 CGATTTCATTAAGAAGAAGAGAGTCGG 60.044 40.741 0.00 0.00 37.57 4.79
3957 5438 5.000012 TCATTAAGAAGAAGAGAGTCGGC 58.000 43.478 0.00 0.00 0.00 5.54
3958 5439 3.870633 TTAAGAAGAAGAGAGTCGGCC 57.129 47.619 0.00 0.00 0.00 6.13
3959 5440 0.899019 AAGAAGAAGAGAGTCGGCCC 59.101 55.000 0.00 0.00 0.00 5.80
3960 5441 0.973496 AGAAGAAGAGAGTCGGCCCC 60.973 60.000 0.00 0.00 0.00 5.80
3961 5442 1.229209 AAGAAGAGAGTCGGCCCCA 60.229 57.895 0.00 0.00 0.00 4.96
3962 5443 0.836400 AAGAAGAGAGTCGGCCCCAA 60.836 55.000 0.00 0.00 0.00 4.12
3963 5444 0.618968 AGAAGAGAGTCGGCCCCAAT 60.619 55.000 0.00 0.00 0.00 3.16
3964 5445 0.253327 GAAGAGAGTCGGCCCCAATT 59.747 55.000 0.00 0.00 0.00 2.32
3965 5446 0.698818 AAGAGAGTCGGCCCCAATTT 59.301 50.000 0.00 0.00 0.00 1.82
3966 5447 1.580059 AGAGAGTCGGCCCCAATTTA 58.420 50.000 0.00 0.00 0.00 1.40
3967 5448 2.127708 AGAGAGTCGGCCCCAATTTAT 58.872 47.619 0.00 0.00 0.00 1.40
3968 5449 3.314693 AGAGAGTCGGCCCCAATTTATA 58.685 45.455 0.00 0.00 0.00 0.98
3969 5450 3.714798 AGAGAGTCGGCCCCAATTTATAA 59.285 43.478 0.00 0.00 0.00 0.98
3970 5451 4.065789 GAGAGTCGGCCCCAATTTATAAG 58.934 47.826 0.00 0.00 0.00 1.73
3971 5452 3.146847 GAGTCGGCCCCAATTTATAAGG 58.853 50.000 0.00 0.00 0.00 2.69
3972 5453 2.781174 AGTCGGCCCCAATTTATAAGGA 59.219 45.455 0.00 0.00 0.00 3.36
3973 5454 3.203487 AGTCGGCCCCAATTTATAAGGAA 59.797 43.478 0.00 0.00 0.00 3.36
3974 5455 3.955551 GTCGGCCCCAATTTATAAGGAAA 59.044 43.478 0.00 0.00 0.00 3.13
3975 5456 4.403113 GTCGGCCCCAATTTATAAGGAAAA 59.597 41.667 0.00 0.00 0.00 2.29
3976 5457 4.403113 TCGGCCCCAATTTATAAGGAAAAC 59.597 41.667 0.00 0.00 0.00 2.43
3977 5458 4.404394 CGGCCCCAATTTATAAGGAAAACT 59.596 41.667 0.00 0.00 0.00 2.66
3978 5459 5.595133 CGGCCCCAATTTATAAGGAAAACTA 59.405 40.000 0.00 0.00 0.00 2.24
3979 5460 6.238925 CGGCCCCAATTTATAAGGAAAACTAG 60.239 42.308 0.00 0.00 0.00 2.57
3980 5461 6.041637 GGCCCCAATTTATAAGGAAAACTAGG 59.958 42.308 0.00 0.00 0.00 3.02
3981 5462 6.837048 GCCCCAATTTATAAGGAAAACTAGGA 59.163 38.462 0.00 0.00 0.00 2.94
3982 5463 7.201884 GCCCCAATTTATAAGGAAAACTAGGAC 60.202 40.741 0.00 0.00 0.00 3.85
3983 5464 7.837187 CCCCAATTTATAAGGAAAACTAGGACA 59.163 37.037 0.00 0.00 0.00 4.02
3984 5465 9.250246 CCCAATTTATAAGGAAAACTAGGACAA 57.750 33.333 0.00 0.00 0.00 3.18
3991 5472 6.844097 AAGGAAAACTAGGACAACAAAACA 57.156 33.333 0.00 0.00 0.00 2.83
3992 5473 6.203808 AGGAAAACTAGGACAACAAAACAC 57.796 37.500 0.00 0.00 0.00 3.32
3993 5474 5.712917 AGGAAAACTAGGACAACAAAACACA 59.287 36.000 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.759782 AGTATATATCTTGCCATGACCGC 58.240 43.478 0.00 0.00 0.00 5.68
51 53 8.037166 TGCAGACTAAGTATATATCTTGCCATG 58.963 37.037 0.00 0.00 0.00 3.66
89 93 3.678056 AACACGGCTCAGTTCAAGATA 57.322 42.857 0.00 0.00 0.00 1.98
90 94 2.550830 AACACGGCTCAGTTCAAGAT 57.449 45.000 0.00 0.00 0.00 2.40
95 99 0.534203 TGGGAAACACGGCTCAGTTC 60.534 55.000 0.00 0.00 0.00 3.01
117 121 5.296283 TGATGCATTTTCACAACTTTTTGGG 59.704 36.000 0.00 0.00 37.49 4.12
222 226 5.762218 AGCAATTACCATGCAGATCTCTTAC 59.238 40.000 0.00 0.00 46.22 2.34
257 285 1.869767 GGCAGCCGATCATAAGACTTG 59.130 52.381 0.00 0.00 0.00 3.16
303 360 2.849942 TGTTGATCACTCACCAACAGG 58.150 47.619 0.00 0.00 43.34 4.00
337 398 7.970061 TGATAGTTTACTATAGTTTCACGCGTT 59.030 33.333 10.22 0.00 39.14 4.84
392 455 1.531365 CCAAGGGTCAAAGCAGGCA 60.531 57.895 0.00 0.00 0.00 4.75
437 500 6.790285 TGTATTTTCGGACAAAAGGAGTAC 57.210 37.500 0.00 0.00 0.00 2.73
440 503 5.414454 TGGATGTATTTTCGGACAAAAGGAG 59.586 40.000 0.00 0.00 0.00 3.69
441 504 5.317808 TGGATGTATTTTCGGACAAAAGGA 58.682 37.500 0.00 0.00 0.00 3.36
442 505 5.637006 TGGATGTATTTTCGGACAAAAGG 57.363 39.130 0.00 0.00 0.00 3.11
443 506 9.632807 TTAAATGGATGTATTTTCGGACAAAAG 57.367 29.630 0.00 0.00 32.79 2.27
444 507 9.632807 CTTAAATGGATGTATTTTCGGACAAAA 57.367 29.630 0.00 0.00 32.79 2.44
445 508 8.247562 CCTTAAATGGATGTATTTTCGGACAAA 58.752 33.333 0.00 0.00 32.79 2.83
446 509 7.147983 CCCTTAAATGGATGTATTTTCGGACAA 60.148 37.037 0.00 0.00 32.79 3.18
447 510 6.320164 CCCTTAAATGGATGTATTTTCGGACA 59.680 38.462 0.00 0.00 32.79 4.02
448 511 6.544564 TCCCTTAAATGGATGTATTTTCGGAC 59.455 38.462 0.00 0.00 32.79 4.79
449 512 6.544564 GTCCCTTAAATGGATGTATTTTCGGA 59.455 38.462 0.00 0.00 33.65 4.55
450 513 6.320164 TGTCCCTTAAATGGATGTATTTTCGG 59.680 38.462 0.00 0.00 33.65 4.30
451 514 7.328277 TGTCCCTTAAATGGATGTATTTTCG 57.672 36.000 0.00 0.00 33.65 3.46
452 515 8.749354 ACTTGTCCCTTAAATGGATGTATTTTC 58.251 33.333 0.00 0.00 33.65 2.29
453 516 8.664669 ACTTGTCCCTTAAATGGATGTATTTT 57.335 30.769 0.00 0.00 33.65 1.82
454 517 8.664669 AACTTGTCCCTTAAATGGATGTATTT 57.335 30.769 0.00 0.00 33.65 1.40
455 518 8.664669 AAACTTGTCCCTTAAATGGATGTATT 57.335 30.769 0.00 0.00 33.65 1.89
456 519 8.664669 AAAACTTGTCCCTTAAATGGATGTAT 57.335 30.769 0.00 0.00 33.65 2.29
457 520 8.485578 AAAAACTTGTCCCTTAAATGGATGTA 57.514 30.769 0.00 0.00 33.65 2.29
458 521 6.994421 AAAACTTGTCCCTTAAATGGATGT 57.006 33.333 0.00 0.00 33.65 3.06
479 542 5.362430 CCAAATAATCCCTCCATCCGAAAAA 59.638 40.000 0.00 0.00 0.00 1.94
480 543 4.892934 CCAAATAATCCCTCCATCCGAAAA 59.107 41.667 0.00 0.00 0.00 2.29
481 544 4.167113 TCCAAATAATCCCTCCATCCGAAA 59.833 41.667 0.00 0.00 0.00 3.46
482 545 3.719479 TCCAAATAATCCCTCCATCCGAA 59.281 43.478 0.00 0.00 0.00 4.30
483 546 3.322862 TCCAAATAATCCCTCCATCCGA 58.677 45.455 0.00 0.00 0.00 4.55
484 547 3.788227 TCCAAATAATCCCTCCATCCG 57.212 47.619 0.00 0.00 0.00 4.18
485 548 5.644188 TCAATCCAAATAATCCCTCCATCC 58.356 41.667 0.00 0.00 0.00 3.51
486 549 6.310149 ACTCAATCCAAATAATCCCTCCATC 58.690 40.000 0.00 0.00 0.00 3.51
487 550 6.285329 ACTCAATCCAAATAATCCCTCCAT 57.715 37.500 0.00 0.00 0.00 3.41
488 551 5.732331 ACTCAATCCAAATAATCCCTCCA 57.268 39.130 0.00 0.00 0.00 3.86
489 552 5.893824 ACAACTCAATCCAAATAATCCCTCC 59.106 40.000 0.00 0.00 0.00 4.30
490 553 6.603201 TCACAACTCAATCCAAATAATCCCTC 59.397 38.462 0.00 0.00 0.00 4.30
491 554 6.493166 TCACAACTCAATCCAAATAATCCCT 58.507 36.000 0.00 0.00 0.00 4.20
492 555 6.773976 TCACAACTCAATCCAAATAATCCC 57.226 37.500 0.00 0.00 0.00 3.85
493 556 7.830739 AGTTCACAACTCAATCCAAATAATCC 58.169 34.615 0.00 0.00 37.02 3.01
520 583 4.304110 CAAACGTACTGAGTACACACCAT 58.696 43.478 21.34 0.04 38.77 3.55
523 586 3.378339 AGCAAACGTACTGAGTACACAC 58.622 45.455 21.34 6.81 38.77 3.82
543 616 6.281405 AGACTTATAGGTTGACCGCATAAAG 58.719 40.000 9.84 6.85 42.08 1.85
560 643 3.036026 CGCACACGCAGAGACTTAT 57.964 52.632 0.00 0.00 38.40 1.73
561 644 4.552278 CGCACACGCAGAGACTTA 57.448 55.556 0.00 0.00 38.40 2.24
579 662 0.498511 CGATGTGTACGCTATGCACG 59.501 55.000 8.10 0.00 46.24 5.34
772 891 1.280421 GGTCAGAGGCAGATTCCTGTT 59.720 52.381 0.00 0.00 42.35 3.16
851 970 1.319541 GCAGGTAGACGCTAGATGGA 58.680 55.000 0.00 0.00 0.00 3.41
860 979 1.091771 CAGGCATTGGCAGGTAGACG 61.092 60.000 13.20 0.00 43.71 4.18
887 1006 9.661954 CCCTACACCAAGGTCATATATATAGAT 57.338 37.037 0.00 0.00 34.56 1.98
888 1007 8.630091 ACCCTACACCAAGGTCATATATATAGA 58.370 37.037 0.00 0.00 34.56 1.98
889 1008 8.840200 ACCCTACACCAAGGTCATATATATAG 57.160 38.462 0.00 0.00 34.56 1.31
958 1091 0.398318 GTTGCTCCACCACCTTCTCT 59.602 55.000 0.00 0.00 0.00 3.10
994 1127 3.357021 GCATGATCTTACACATGTTGCG 58.643 45.455 0.00 0.00 43.67 4.85
1089 1222 2.279918 AACGTGTGCTCGACCACC 60.280 61.111 8.35 0.00 34.85 4.61
1092 1225 1.947642 AACGAACGTGTGCTCGACC 60.948 57.895 13.83 0.00 38.43 4.79
1152 1285 2.420043 CCGTTCACCACCGTCACT 59.580 61.111 0.00 0.00 0.00 3.41
1200 1333 2.203596 ACGACGGTGTCCCCTTCT 60.204 61.111 0.00 0.00 29.24 2.85
1273 1406 2.491291 ATGCATGCATGGTACGCAA 58.509 47.368 31.74 0.21 43.84 4.85
1330 1523 2.101770 GCGTTAGAGGACGGACGG 59.898 66.667 0.00 0.00 42.98 4.79
1335 1528 1.516386 ATGCACGCGTTAGAGGACG 60.516 57.895 10.22 0.00 45.40 4.79
1556 1763 2.588439 GGAAACGGGTAGGAGCCC 59.412 66.667 0.00 0.00 45.21 5.19
1560 1767 1.681076 GCTTGGGAAACGGGTAGGA 59.319 57.895 0.00 0.00 0.00 2.94
1735 1942 2.457598 TCGGAGGAGTATCAAACAGCT 58.542 47.619 0.00 0.00 36.25 4.24
1737 1944 3.315470 TCGATCGGAGGAGTATCAAACAG 59.685 47.826 16.41 0.00 36.25 3.16
1771 1979 1.333258 GCAACTCAGCACGTTCTTCAC 60.333 52.381 0.00 0.00 0.00 3.18
1782 1990 1.072159 ACAGGGTCAGCAACTCAGC 59.928 57.895 0.00 0.00 0.00 4.26
1802 2010 5.066505 CACCCCTACAAATTAACAGAGCATC 59.933 44.000 0.00 0.00 0.00 3.91
1805 2013 3.694566 CCACCCCTACAAATTAACAGAGC 59.305 47.826 0.00 0.00 0.00 4.09
1807 2015 3.692690 GCCACCCCTACAAATTAACAGA 58.307 45.455 0.00 0.00 0.00 3.41
1808 2016 2.422127 CGCCACCCCTACAAATTAACAG 59.578 50.000 0.00 0.00 0.00 3.16
1809 2017 2.438411 CGCCACCCCTACAAATTAACA 58.562 47.619 0.00 0.00 0.00 2.41
1810 2018 1.746787 CCGCCACCCCTACAAATTAAC 59.253 52.381 0.00 0.00 0.00 2.01
1812 2020 1.287217 TCCGCCACCCCTACAAATTA 58.713 50.000 0.00 0.00 0.00 1.40
1813 2021 0.406361 TTCCGCCACCCCTACAAATT 59.594 50.000 0.00 0.00 0.00 1.82
1814 2022 0.034477 CTTCCGCCACCCCTACAAAT 60.034 55.000 0.00 0.00 0.00 2.32
2137 2345 3.590824 CGTCCTTGGGGATGTTGC 58.409 61.111 0.00 0.00 44.33 4.17
2157 2365 5.063880 AGGCGATTTCTCTGTACAGTTTTT 58.936 37.500 21.99 5.42 0.00 1.94
2165 2373 3.491619 GCATGAGAGGCGATTTCTCTGTA 60.492 47.826 0.00 0.00 41.23 2.74
2291 2505 4.498520 AGATGCTCGTCCACGCGG 62.499 66.667 12.47 0.00 39.60 6.46
2305 2519 1.965754 GCCCAGCGTGAGGAAGAGAT 61.966 60.000 0.00 0.00 0.00 2.75
2861 3075 1.827789 GTGGCAGTGCAGGAACCAA 60.828 57.895 18.61 0.00 30.82 3.67
3062 3642 7.438160 TCATCTACTACATTATTTCGTGCCAAG 59.562 37.037 0.00 0.00 0.00 3.61
3081 3661 5.882557 TGAAAAGCAGGGAAGAATCATCTAC 59.117 40.000 0.00 0.00 33.77 2.59
3100 3683 6.653320 ACTCAAATACAATACTCCGCTGAAAA 59.347 34.615 0.00 0.00 0.00 2.29
3169 3754 4.172512 CTGCAGAGATGCCGGGCT 62.173 66.667 21.46 5.57 0.00 5.19
3173 3758 1.579964 TTGTTGCTGCAGAGATGCCG 61.580 55.000 20.43 0.00 0.00 5.69
3188 3773 4.202357 TGGATGTGTTGACTAGCTCTTGTT 60.202 41.667 0.00 0.00 0.00 2.83
3196 3781 4.093998 GTGCATTCTGGATGTGTTGACTAG 59.906 45.833 0.00 0.00 38.07 2.57
3202 3787 1.888512 GGTGTGCATTCTGGATGTGTT 59.111 47.619 0.00 0.00 38.07 3.32
3203 3788 1.202915 TGGTGTGCATTCTGGATGTGT 60.203 47.619 0.00 0.00 38.07 3.72
3204 3789 1.536940 TGGTGTGCATTCTGGATGTG 58.463 50.000 0.00 0.00 38.07 3.21
3205 3790 2.291089 TGATGGTGTGCATTCTGGATGT 60.291 45.455 0.00 0.00 38.07 3.06
3206 3791 2.371306 TGATGGTGTGCATTCTGGATG 58.629 47.619 0.00 0.00 38.85 3.51
3207 3792 2.812836 TGATGGTGTGCATTCTGGAT 57.187 45.000 0.00 0.00 0.00 3.41
3208 3793 2.583024 TTGATGGTGTGCATTCTGGA 57.417 45.000 0.00 0.00 0.00 3.86
3209 3794 3.880047 AATTGATGGTGTGCATTCTGG 57.120 42.857 0.00 0.00 0.00 3.86
3210 3795 5.106038 ACAGTAATTGATGGTGTGCATTCTG 60.106 40.000 0.00 0.00 0.00 3.02
3224 3809 4.209307 TGGCGTGGATAACAGTAATTGA 57.791 40.909 0.00 0.00 0.00 2.57
3228 3813 2.289756 TGCTTGGCGTGGATAACAGTAA 60.290 45.455 0.00 0.00 0.00 2.24
3260 3861 3.765381 TCCATGTGTTGTCAATGGATGT 58.235 40.909 2.10 0.00 36.58 3.06
3265 3866 4.083377 TCACGAATCCATGTGTTGTCAATG 60.083 41.667 0.00 0.00 37.38 2.82
3274 3875 3.273434 ACCATTCTCACGAATCCATGTG 58.727 45.455 0.00 0.00 37.77 3.21
3282 3883 5.505654 GCTTTTGAAGAACCATTCTCACGAA 60.506 40.000 0.00 0.00 39.61 3.85
3286 3887 5.126869 TGTTGCTTTTGAAGAACCATTCTCA 59.873 36.000 0.00 0.00 39.61 3.27
3289 3890 4.507756 GGTGTTGCTTTTGAAGAACCATTC 59.492 41.667 0.00 0.00 0.00 2.67
3299 3900 3.243704 GCAATAGTGGGTGTTGCTTTTGA 60.244 43.478 2.36 0.00 46.81 2.69
3313 3914 4.145876 ACACAATGTCAACGCAATAGTG 57.854 40.909 0.00 0.00 0.00 2.74
3314 3915 4.829064 AACACAATGTCAACGCAATAGT 57.171 36.364 0.00 0.00 0.00 2.12
3315 3916 6.370593 ACTAAACACAATGTCAACGCAATAG 58.629 36.000 0.00 0.00 0.00 1.73
3316 3917 6.203915 AGACTAAACACAATGTCAACGCAATA 59.796 34.615 0.00 0.00 32.41 1.90
3317 3918 5.008613 AGACTAAACACAATGTCAACGCAAT 59.991 36.000 0.00 0.00 32.41 3.56
3322 3923 7.855904 CCACTAAAGACTAAACACAATGTCAAC 59.144 37.037 0.00 0.00 32.41 3.18
3356 3957 7.992608 CCTTTATTTGCCTTTTTATATTGCCCT 59.007 33.333 0.00 0.00 0.00 5.19
3364 3965 9.620259 TGTGTTTTCCTTTATTTGCCTTTTTAT 57.380 25.926 0.00 0.00 0.00 1.40
3365 3966 8.884726 GTGTGTTTTCCTTTATTTGCCTTTTTA 58.115 29.630 0.00 0.00 0.00 1.52
3366 3967 7.391833 TGTGTGTTTTCCTTTATTTGCCTTTTT 59.608 29.630 0.00 0.00 0.00 1.94
3383 3984 6.343716 TGATGCTATGGATTTGTGTGTTTT 57.656 33.333 0.00 0.00 0.00 2.43
3405 4006 7.817962 CCGGGAAGATGGTTAAGTATACTAATG 59.182 40.741 5.65 0.00 0.00 1.90
3408 4009 6.376248 ACCGGGAAGATGGTTAAGTATACTA 58.624 40.000 6.32 0.00 33.81 1.82
3426 4027 2.642154 AAAACACATGTGTACCGGGA 57.358 45.000 30.75 0.00 44.13 5.14
3427 4028 3.754323 ACATAAAACACATGTGTACCGGG 59.246 43.478 30.75 21.30 44.13 5.73
3428 4029 4.717991 CACATAAAACACATGTGTACCGG 58.282 43.478 30.75 20.34 45.32 5.28
3441 4051 2.754552 TCAGCATGAGGGCACATAAAAC 59.245 45.455 0.00 0.00 42.56 2.43
3496 4106 6.594159 TCTTTTCCTGTCTTTTACGATCCATC 59.406 38.462 0.00 0.00 0.00 3.51
3501 4111 5.179555 GCTGTCTTTTCCTGTCTTTTACGAT 59.820 40.000 0.00 0.00 0.00 3.73
3502 4112 4.510340 GCTGTCTTTTCCTGTCTTTTACGA 59.490 41.667 0.00 0.00 0.00 3.43
3503 4113 4.511826 AGCTGTCTTTTCCTGTCTTTTACG 59.488 41.667 0.00 0.00 0.00 3.18
3506 4116 4.786425 AGAGCTGTCTTTTCCTGTCTTTT 58.214 39.130 0.00 0.00 0.00 2.27
3525 4135 2.481854 CCTCCTCATCATGCGAAAGAG 58.518 52.381 0.00 0.00 0.00 2.85
3527 4137 0.942962 GCCTCCTCATCATGCGAAAG 59.057 55.000 0.00 0.00 0.00 2.62
3528 4138 0.464373 GGCCTCCTCATCATGCGAAA 60.464 55.000 0.00 0.00 0.00 3.46
3529 4139 1.146930 GGCCTCCTCATCATGCGAA 59.853 57.895 0.00 0.00 0.00 4.70
3530 4140 2.824546 GGCCTCCTCATCATGCGA 59.175 61.111 0.00 0.00 0.00 5.10
3531 4141 2.664185 CGGCCTCCTCATCATGCG 60.664 66.667 0.00 0.00 0.00 4.73
3532 4142 1.596477 GTCGGCCTCCTCATCATGC 60.596 63.158 0.00 0.00 0.00 4.06
3533 4143 0.033228 GAGTCGGCCTCCTCATCATG 59.967 60.000 12.32 0.00 33.79 3.07
3534 4144 0.105760 AGAGTCGGCCTCCTCATCAT 60.106 55.000 17.74 0.00 41.47 2.45
3535 4145 0.324738 AAGAGTCGGCCTCCTCATCA 60.325 55.000 17.74 0.00 41.47 3.07
3536 4146 0.827368 AAAGAGTCGGCCTCCTCATC 59.173 55.000 17.74 1.20 41.47 2.92
3538 4148 0.251832 AGAAAGAGTCGGCCTCCTCA 60.252 55.000 17.74 0.00 41.47 3.86
3539 4149 0.458260 GAGAAAGAGTCGGCCTCCTC 59.542 60.000 0.00 5.74 41.47 3.71
3540 4150 0.040499 AGAGAAAGAGTCGGCCTCCT 59.960 55.000 0.00 0.00 41.47 3.69
3542 4152 1.470051 AGAGAGAAAGAGTCGGCCTC 58.530 55.000 0.00 0.00 40.80 4.70
3543 4153 1.822371 GAAGAGAGAAAGAGTCGGCCT 59.178 52.381 0.00 0.00 0.00 5.19
3544 4154 1.546476 TGAAGAGAGAAAGAGTCGGCC 59.454 52.381 0.00 0.00 0.00 6.13
3545 4155 2.029828 TGTGAAGAGAGAAAGAGTCGGC 60.030 50.000 0.00 0.00 0.00 5.54
3546 4156 3.570559 GTGTGAAGAGAGAAAGAGTCGG 58.429 50.000 0.00 0.00 0.00 4.79
3548 4158 4.592485 TGGTGTGAAGAGAGAAAGAGTC 57.408 45.455 0.00 0.00 0.00 3.36
3551 4161 5.684704 ACAAATGGTGTGAAGAGAGAAAGA 58.315 37.500 0.00 0.00 39.72 2.52
3552 4162 6.183360 ACAACAAATGGTGTGAAGAGAGAAAG 60.183 38.462 2.74 0.00 45.59 2.62
3553 4163 5.652014 ACAACAAATGGTGTGAAGAGAGAAA 59.348 36.000 2.74 0.00 45.59 2.52
3554 4164 5.192927 ACAACAAATGGTGTGAAGAGAGAA 58.807 37.500 2.74 0.00 45.59 2.87
3555 4165 4.780815 ACAACAAATGGTGTGAAGAGAGA 58.219 39.130 2.74 0.00 45.59 3.10
3556 4166 5.049405 GGTACAACAAATGGTGTGAAGAGAG 60.049 44.000 14.15 0.00 46.89 3.20
3557 4167 4.819630 GGTACAACAAATGGTGTGAAGAGA 59.180 41.667 14.15 0.00 46.89 3.10
3559 4169 4.787551 AGGTACAACAAATGGTGTGAAGA 58.212 39.130 14.15 0.00 46.89 2.87
3560 4170 5.514274 AAGGTACAACAAATGGTGTGAAG 57.486 39.130 14.15 0.00 46.89 3.02
3561 4171 6.358178 TCTAAGGTACAACAAATGGTGTGAA 58.642 36.000 14.15 0.00 46.89 3.18
3562 4172 5.931294 TCTAAGGTACAACAAATGGTGTGA 58.069 37.500 14.15 0.00 46.89 3.58
3563 4173 6.627395 TTCTAAGGTACAACAAATGGTGTG 57.373 37.500 14.15 0.00 46.89 3.82
3565 4175 6.016276 AGCTTTCTAAGGTACAACAAATGGTG 60.016 38.462 0.00 0.00 37.49 4.17
3566 4176 6.068670 AGCTTTCTAAGGTACAACAAATGGT 58.931 36.000 0.00 0.00 37.49 3.55
3568 4178 7.379529 CACAAGCTTTCTAAGGTACAACAAATG 59.620 37.037 0.00 0.00 38.49 2.32
3570 4180 6.600032 TCACAAGCTTTCTAAGGTACAACAAA 59.400 34.615 0.00 0.00 38.49 2.83
3571 4181 6.116806 TCACAAGCTTTCTAAGGTACAACAA 58.883 36.000 0.00 0.00 38.49 2.83
3572 4182 5.676552 TCACAAGCTTTCTAAGGTACAACA 58.323 37.500 0.00 0.00 38.49 3.33
3575 4185 6.360370 AGATCACAAGCTTTCTAAGGTACA 57.640 37.500 0.00 0.00 38.49 2.90
3585 4195 4.379302 AGGGAGAAAGATCACAAGCTTT 57.621 40.909 0.00 0.00 43.54 3.51
3586 4196 5.505181 TTAGGGAGAAAGATCACAAGCTT 57.495 39.130 0.00 0.00 30.83 3.74
3588 4198 4.095632 GCTTTAGGGAGAAAGATCACAAGC 59.904 45.833 0.00 0.00 38.48 4.01
3589 4199 4.637977 GGCTTTAGGGAGAAAGATCACAAG 59.362 45.833 0.00 0.00 38.48 3.16
3590 4200 4.289672 AGGCTTTAGGGAGAAAGATCACAA 59.710 41.667 0.00 0.00 38.48 3.33
3591 4201 3.846588 AGGCTTTAGGGAGAAAGATCACA 59.153 43.478 0.00 0.00 38.48 3.58
3595 4205 5.787846 AAAGAGGCTTTAGGGAGAAAGAT 57.212 39.130 0.17 0.00 38.48 2.40
3619 4229 6.754209 TGCTTTTTCTAACTTGATTCGCAAAA 59.246 30.769 0.00 0.00 35.74 2.44
3621 4231 5.826586 TGCTTTTTCTAACTTGATTCGCAA 58.173 33.333 0.00 0.00 34.73 4.85
3623 4233 6.142817 TCTTGCTTTTTCTAACTTGATTCGC 58.857 36.000 0.00 0.00 0.00 4.70
3624 4234 8.070171 TCTTCTTGCTTTTTCTAACTTGATTCG 58.930 33.333 0.00 0.00 0.00 3.34
3625 4235 9.392021 CTCTTCTTGCTTTTTCTAACTTGATTC 57.608 33.333 0.00 0.00 0.00 2.52
3626 4236 9.125026 TCTCTTCTTGCTTTTTCTAACTTGATT 57.875 29.630 0.00 0.00 0.00 2.57
3627 4237 8.563732 GTCTCTTCTTGCTTTTTCTAACTTGAT 58.436 33.333 0.00 0.00 0.00 2.57
3628 4238 7.552687 TGTCTCTTCTTGCTTTTTCTAACTTGA 59.447 33.333 0.00 0.00 0.00 3.02
3629 4239 7.641802 GTGTCTCTTCTTGCTTTTTCTAACTTG 59.358 37.037 0.00 0.00 0.00 3.16
3630 4240 7.201741 GGTGTCTCTTCTTGCTTTTTCTAACTT 60.202 37.037 0.00 0.00 0.00 2.66
3632 4242 6.261158 AGGTGTCTCTTCTTGCTTTTTCTAAC 59.739 38.462 0.00 0.00 0.00 2.34
3633 4243 6.357367 AGGTGTCTCTTCTTGCTTTTTCTAA 58.643 36.000 0.00 0.00 0.00 2.10
3635 4245 4.786425 AGGTGTCTCTTCTTGCTTTTTCT 58.214 39.130 0.00 0.00 0.00 2.52
3636 4246 5.334491 GCTAGGTGTCTCTTCTTGCTTTTTC 60.334 44.000 0.00 0.00 0.00 2.29
3641 4251 1.552792 GGCTAGGTGTCTCTTCTTGCT 59.447 52.381 0.00 0.00 31.78 3.91
3642 4252 1.276421 TGGCTAGGTGTCTCTTCTTGC 59.724 52.381 0.00 0.00 0.00 4.01
3644 4254 4.505742 CCTTTTGGCTAGGTGTCTCTTCTT 60.506 45.833 0.00 0.00 0.00 2.52
3645 4255 3.008485 CCTTTTGGCTAGGTGTCTCTTCT 59.992 47.826 0.00 0.00 0.00 2.85
3646 4256 3.339141 CCTTTTGGCTAGGTGTCTCTTC 58.661 50.000 0.00 0.00 0.00 2.87
3647 4257 3.425162 CCTTTTGGCTAGGTGTCTCTT 57.575 47.619 0.00 0.00 0.00 2.85
3660 4270 4.279169 TGTGAAGAGAGAATTGCCTTTTGG 59.721 41.667 0.00 0.00 44.18 3.28
3661 4271 5.218139 GTGTGAAGAGAGAATTGCCTTTTG 58.782 41.667 0.00 0.00 0.00 2.44
3662 4272 4.279420 GGTGTGAAGAGAGAATTGCCTTTT 59.721 41.667 0.00 0.00 0.00 2.27
3663 4273 3.823304 GGTGTGAAGAGAGAATTGCCTTT 59.177 43.478 0.00 0.00 0.00 3.11
3665 4275 2.373169 TGGTGTGAAGAGAGAATTGCCT 59.627 45.455 0.00 0.00 0.00 4.75
3666 4276 2.783135 TGGTGTGAAGAGAGAATTGCC 58.217 47.619 0.00 0.00 0.00 4.52
3667 4277 5.159209 CAAATGGTGTGAAGAGAGAATTGC 58.841 41.667 0.00 0.00 0.00 3.56
3668 4278 6.323203 ACAAATGGTGTGAAGAGAGAATTG 57.677 37.500 0.00 0.00 39.72 2.32
3669 4279 6.322201 ACAACAAATGGTGTGAAGAGAGAATT 59.678 34.615 2.74 0.00 45.59 2.17
3670 4280 5.829924 ACAACAAATGGTGTGAAGAGAGAAT 59.170 36.000 2.74 0.00 45.59 2.40
3672 4282 4.780815 ACAACAAATGGTGTGAAGAGAGA 58.219 39.130 2.74 0.00 45.59 3.10
3673 4283 5.049405 GGTACAACAAATGGTGTGAAGAGAG 60.049 44.000 14.15 0.00 46.89 3.20
3675 4285 4.821805 AGGTACAACAAATGGTGTGAAGAG 59.178 41.667 14.15 0.00 46.89 2.85
3676 4286 4.787551 AGGTACAACAAATGGTGTGAAGA 58.212 39.130 14.15 0.00 46.89 2.87
3678 4288 6.358178 TCTAAGGTACAACAAATGGTGTGAA 58.642 36.000 14.15 0.00 46.89 3.18
3680 4290 6.627395 TTCTAAGGTACAACAAATGGTGTG 57.373 37.500 14.15 0.00 46.89 3.82
3682 4292 6.016276 AGCTTTCTAAGGTACAACAAATGGTG 60.016 38.462 0.00 0.00 37.49 4.17
3687 4297 7.633193 TGAAAGCTTTCTAAGGTACAACAAA 57.367 32.000 33.03 10.65 38.49 2.83
3688 4298 7.338449 ACTTGAAAGCTTTCTAAGGTACAACAA 59.662 33.333 31.82 19.93 38.49 2.83
3689 4299 6.826741 ACTTGAAAGCTTTCTAAGGTACAACA 59.173 34.615 31.82 15.77 38.49 3.33
3690 4300 7.132863 CACTTGAAAGCTTTCTAAGGTACAAC 58.867 38.462 31.82 14.00 38.49 3.32
3691 4301 6.826741 ACACTTGAAAGCTTTCTAAGGTACAA 59.173 34.615 31.82 21.24 38.49 2.41
3692 4302 6.260050 CACACTTGAAAGCTTTCTAAGGTACA 59.740 38.462 31.82 17.19 38.49 2.90
3694 4304 5.238650 GCACACTTGAAAGCTTTCTAAGGTA 59.761 40.000 31.82 17.81 38.49 3.08
3696 4306 4.036734 TGCACACTTGAAAGCTTTCTAAGG 59.963 41.667 31.82 26.31 38.02 2.69
3698 4308 5.574891 TTGCACACTTGAAAGCTTTCTAA 57.425 34.783 33.03 24.38 38.02 2.10
3700 4310 4.454728 TTTGCACACTTGAAAGCTTTCT 57.545 36.364 33.03 15.75 38.02 2.52
3701 4311 5.723492 AATTTGCACACTTGAAAGCTTTC 57.277 34.783 28.61 28.61 37.69 2.62
3702 4312 7.608308 TTTAATTTGCACACTTGAAAGCTTT 57.392 28.000 12.53 12.53 0.00 3.51
3703 4313 7.790823 ATTTAATTTGCACACTTGAAAGCTT 57.209 28.000 0.00 0.00 0.00 3.74
3704 4314 7.790823 AATTTAATTTGCACACTTGAAAGCT 57.209 28.000 0.00 0.00 0.00 3.74
3723 4591 8.690884 TGACATCAACTTTCCAGAACAAATTTA 58.309 29.630 0.00 0.00 0.00 1.40
3725 4593 6.980397 GTGACATCAACTTTCCAGAACAAATT 59.020 34.615 0.00 0.00 0.00 1.82
3726 4594 6.461509 GGTGACATCAACTTTCCAGAACAAAT 60.462 38.462 0.00 0.00 0.00 2.32
3733 4601 3.743521 TGAGGTGACATCAACTTTCCAG 58.256 45.455 0.00 0.00 45.35 3.86
3734 4602 3.855255 TGAGGTGACATCAACTTTCCA 57.145 42.857 0.00 0.00 45.35 3.53
3736 4604 5.936956 AGATCTTGAGGTGACATCAACTTTC 59.063 40.000 8.76 6.32 45.35 2.62
3737 4605 5.874093 AGATCTTGAGGTGACATCAACTTT 58.126 37.500 8.76 0.00 45.35 2.66
3738 4606 5.495926 AGATCTTGAGGTGACATCAACTT 57.504 39.130 8.76 0.00 45.35 2.66
3739 4607 7.578571 GAAGTAGATCTTGAGGTGACATCAACT 60.579 40.741 8.76 7.59 40.74 3.16
3740 4608 5.971763 AGTAGATCTTGAGGTGACATCAAC 58.028 41.667 8.76 0.00 33.28 3.18
3741 4609 6.438741 AGAAGTAGATCTTGAGGTGACATCAA 59.561 38.462 12.35 12.35 36.40 2.57
3742 4610 5.954752 AGAAGTAGATCTTGAGGTGACATCA 59.045 40.000 0.00 0.00 36.40 3.07
3743 4611 6.463995 AGAAGTAGATCTTGAGGTGACATC 57.536 41.667 0.00 0.00 36.40 3.06
3744 4612 7.122715 ACTAGAAGTAGATCTTGAGGTGACAT 58.877 38.462 0.00 0.00 36.40 3.06
3745 4613 6.486056 ACTAGAAGTAGATCTTGAGGTGACA 58.514 40.000 0.00 0.00 36.40 3.58
3746 4614 7.399245 AACTAGAAGTAGATCTTGAGGTGAC 57.601 40.000 0.00 0.00 36.40 3.67
3748 4616 8.962679 ACTTAACTAGAAGTAGATCTTGAGGTG 58.037 37.037 0.00 0.00 37.90 4.00
3749 4617 8.962679 CACTTAACTAGAAGTAGATCTTGAGGT 58.037 37.037 0.00 0.00 37.57 3.85
3750 4618 9.179909 TCACTTAACTAGAAGTAGATCTTGAGG 57.820 37.037 0.00 0.00 37.57 3.86
3756 4624 9.959749 CCAAGATCACTTAACTAGAAGTAGATC 57.040 37.037 17.57 17.57 40.15 2.75
3757 4625 8.919145 CCCAAGATCACTTAACTAGAAGTAGAT 58.081 37.037 0.00 3.37 37.57 1.98
3758 4626 7.147880 GCCCAAGATCACTTAACTAGAAGTAGA 60.148 40.741 0.00 0.00 37.57 2.59
3759 4627 6.981559 GCCCAAGATCACTTAACTAGAAGTAG 59.018 42.308 0.00 0.00 37.57 2.57
3761 4629 5.248477 TGCCCAAGATCACTTAACTAGAAGT 59.752 40.000 0.00 0.00 40.35 3.01
3762 4630 5.734720 TGCCCAAGATCACTTAACTAGAAG 58.265 41.667 0.00 0.00 34.70 2.85
3767 5248 4.702131 GTGAATGCCCAAGATCACTTAACT 59.298 41.667 0.00 0.00 39.21 2.24
3775 5256 3.126831 CGTCTAGTGAATGCCCAAGATC 58.873 50.000 0.00 0.00 0.00 2.75
3778 5259 2.386661 ACGTCTAGTGAATGCCCAAG 57.613 50.000 0.00 0.00 0.00 3.61
3789 5270 1.140452 TCTCCGATAGCCACGTCTAGT 59.860 52.381 0.00 0.00 0.00 2.57
3790 5271 1.880271 TCTCCGATAGCCACGTCTAG 58.120 55.000 0.00 0.00 0.00 2.43
3792 5273 1.025812 CTTCTCCGATAGCCACGTCT 58.974 55.000 0.00 0.00 0.00 4.18
3793 5274 1.022735 TCTTCTCCGATAGCCACGTC 58.977 55.000 0.00 0.00 0.00 4.34
3794 5275 1.405821 CTTCTTCTCCGATAGCCACGT 59.594 52.381 0.00 0.00 0.00 4.49
3796 5277 2.952978 TCTCTTCTTCTCCGATAGCCAC 59.047 50.000 0.00 0.00 0.00 5.01
3797 5278 3.117851 TCTCTCTTCTTCTCCGATAGCCA 60.118 47.826 0.00 0.00 0.00 4.75
3798 5279 3.252458 GTCTCTCTTCTTCTCCGATAGCC 59.748 52.174 0.00 0.00 0.00 3.93
3799 5280 4.134563 AGTCTCTCTTCTTCTCCGATAGC 58.865 47.826 0.00 0.00 0.00 2.97
3800 5281 4.447724 CGAGTCTCTCTTCTTCTCCGATAG 59.552 50.000 0.00 0.00 0.00 2.08
3801 5282 4.373527 CGAGTCTCTCTTCTTCTCCGATA 58.626 47.826 0.00 0.00 0.00 2.92
3803 5284 2.623535 CGAGTCTCTCTTCTTCTCCGA 58.376 52.381 0.00 0.00 0.00 4.55
3804 5285 1.668751 CCGAGTCTCTCTTCTTCTCCG 59.331 57.143 0.00 0.00 0.00 4.63
3805 5286 2.422127 CACCGAGTCTCTCTTCTTCTCC 59.578 54.545 0.00 0.00 0.00 3.71
3806 5287 3.078837 ACACCGAGTCTCTCTTCTTCTC 58.921 50.000 0.00 0.00 0.00 2.87
3807 5288 3.078837 GACACCGAGTCTCTCTTCTTCT 58.921 50.000 0.00 0.00 44.09 2.85
3808 5289 2.159626 CGACACCGAGTCTCTCTTCTTC 60.160 54.545 0.00 0.00 45.32 2.87
3809 5290 1.807742 CGACACCGAGTCTCTCTTCTT 59.192 52.381 0.00 0.00 45.32 2.52
3810 5291 1.270947 ACGACACCGAGTCTCTCTTCT 60.271 52.381 0.00 0.00 45.32 2.85
3811 5292 1.158434 ACGACACCGAGTCTCTCTTC 58.842 55.000 0.00 0.00 45.32 2.87
3812 5293 1.267261 CAACGACACCGAGTCTCTCTT 59.733 52.381 0.00 0.00 45.32 2.85
3813 5294 0.875728 CAACGACACCGAGTCTCTCT 59.124 55.000 0.00 0.00 45.32 3.10
3814 5295 0.109689 CCAACGACACCGAGTCTCTC 60.110 60.000 0.00 0.00 45.32 3.20
3815 5296 1.524863 CCCAACGACACCGAGTCTCT 61.525 60.000 0.00 0.00 45.32 3.10
3816 5297 1.080705 CCCAACGACACCGAGTCTC 60.081 63.158 0.00 0.00 45.32 3.36
3817 5298 3.048602 CCCAACGACACCGAGTCT 58.951 61.111 0.00 0.00 45.32 3.24
3818 5299 2.737376 GCCCAACGACACCGAGTC 60.737 66.667 0.00 0.00 44.02 3.36
3819 5300 1.537814 TATGCCCAACGACACCGAGT 61.538 55.000 0.00 0.00 39.50 4.18
3820 5301 0.179084 ATATGCCCAACGACACCGAG 60.179 55.000 0.00 0.00 39.50 4.63
3821 5302 0.179094 GATATGCCCAACGACACCGA 60.179 55.000 0.00 0.00 39.50 4.69
3822 5303 0.179084 AGATATGCCCAACGACACCG 60.179 55.000 0.00 0.00 42.50 4.94
3823 5304 2.038387 AAGATATGCCCAACGACACC 57.962 50.000 0.00 0.00 0.00 4.16
3824 5305 2.747446 ACAAAGATATGCCCAACGACAC 59.253 45.455 0.00 0.00 0.00 3.67
3825 5306 2.746904 CACAAAGATATGCCCAACGACA 59.253 45.455 0.00 0.00 0.00 4.35
3826 5307 2.747446 ACACAAAGATATGCCCAACGAC 59.253 45.455 0.00 0.00 0.00 4.34
3827 5308 3.066291 ACACAAAGATATGCCCAACGA 57.934 42.857 0.00 0.00 0.00 3.85
3828 5309 3.427503 GGAACACAAAGATATGCCCAACG 60.428 47.826 0.00 0.00 0.00 4.10
3829 5310 3.509575 TGGAACACAAAGATATGCCCAAC 59.490 43.478 0.00 0.00 0.00 3.77
3830 5311 3.772387 TGGAACACAAAGATATGCCCAA 58.228 40.909 0.00 0.00 0.00 4.12
3831 5312 3.448093 TGGAACACAAAGATATGCCCA 57.552 42.857 0.00 0.00 0.00 5.36
3845 5326 1.340248 GTTGGAGAGACGAGTGGAACA 59.660 52.381 0.00 0.00 41.43 3.18
3846 5327 1.340248 TGTTGGAGAGACGAGTGGAAC 59.660 52.381 0.00 0.00 0.00 3.62
3847 5328 1.699730 TGTTGGAGAGACGAGTGGAA 58.300 50.000 0.00 0.00 0.00 3.53
3848 5329 1.699730 TTGTTGGAGAGACGAGTGGA 58.300 50.000 0.00 0.00 0.00 4.02
3849 5330 2.135933 GTTTGTTGGAGAGACGAGTGG 58.864 52.381 0.00 0.00 0.00 4.00
3850 5331 2.821546 TGTTTGTTGGAGAGACGAGTG 58.178 47.619 0.00 0.00 0.00 3.51
3851 5332 3.069586 TCATGTTTGTTGGAGAGACGAGT 59.930 43.478 0.00 0.00 0.00 4.18
3852 5333 3.653344 TCATGTTTGTTGGAGAGACGAG 58.347 45.455 0.00 0.00 0.00 4.18
3853 5334 3.744238 TCATGTTTGTTGGAGAGACGA 57.256 42.857 0.00 0.00 0.00 4.20
3854 5335 4.214119 ACATTCATGTTTGTTGGAGAGACG 59.786 41.667 0.00 0.00 37.90 4.18
3855 5336 5.695851 ACATTCATGTTTGTTGGAGAGAC 57.304 39.130 0.00 0.00 37.90 3.36
3868 5349 4.510038 GTTCTTGGCTGAACATTCATGT 57.490 40.909 15.36 0.00 44.00 3.21
3885 5366 5.617252 TGAGGTTCCGTAAGAAAATGTTCT 58.383 37.500 0.00 0.00 46.47 3.01
3886 5367 5.617087 GCTGAGGTTCCGTAAGAAAATGTTC 60.617 44.000 0.00 0.00 43.02 3.18
3887 5368 4.215613 GCTGAGGTTCCGTAAGAAAATGTT 59.784 41.667 0.00 0.00 43.02 2.71
3888 5369 3.751698 GCTGAGGTTCCGTAAGAAAATGT 59.248 43.478 0.00 0.00 43.02 2.71
3889 5370 3.751175 TGCTGAGGTTCCGTAAGAAAATG 59.249 43.478 0.00 0.00 43.02 2.32
3890 5371 4.003648 CTGCTGAGGTTCCGTAAGAAAAT 58.996 43.478 0.00 0.00 43.02 1.82
3891 5372 3.070446 TCTGCTGAGGTTCCGTAAGAAAA 59.930 43.478 0.00 0.00 43.02 2.29
3892 5373 2.631062 TCTGCTGAGGTTCCGTAAGAAA 59.369 45.455 0.00 0.00 43.02 2.52
3893 5374 2.231478 CTCTGCTGAGGTTCCGTAAGAA 59.769 50.000 12.54 0.00 36.59 2.52
3894 5375 1.819288 CTCTGCTGAGGTTCCGTAAGA 59.181 52.381 12.54 0.00 36.59 2.10
3895 5376 2.285827 CTCTGCTGAGGTTCCGTAAG 57.714 55.000 12.54 0.00 36.70 2.34
3905 5386 3.007920 ACCCTGCCCTCTGCTGAG 61.008 66.667 13.35 13.35 41.11 3.35
3906 5387 3.324930 CACCCTGCCCTCTGCTGA 61.325 66.667 0.00 0.00 41.11 4.26
3909 5390 4.792804 GAGCACCCTGCCCTCTGC 62.793 72.222 0.00 0.00 46.52 4.26
3910 5391 4.106925 GGAGCACCCTGCCCTCTG 62.107 72.222 0.00 0.00 46.52 3.35
3945 5426 0.253327 AATTGGGGCCGACTCTCTTC 59.747 55.000 0.00 0.00 0.00 2.87
3946 5427 0.698818 AAATTGGGGCCGACTCTCTT 59.301 50.000 0.00 0.00 0.00 2.85
3947 5428 1.580059 TAAATTGGGGCCGACTCTCT 58.420 50.000 0.00 0.00 0.00 3.10
3948 5429 2.640316 ATAAATTGGGGCCGACTCTC 57.360 50.000 0.00 0.00 0.00 3.20
3949 5430 3.181443 CCTTATAAATTGGGGCCGACTCT 60.181 47.826 0.00 0.00 0.00 3.24
3950 5431 3.146847 CCTTATAAATTGGGGCCGACTC 58.853 50.000 0.00 0.00 0.00 3.36
3951 5432 2.781174 TCCTTATAAATTGGGGCCGACT 59.219 45.455 0.00 0.00 0.00 4.18
3952 5433 3.217681 TCCTTATAAATTGGGGCCGAC 57.782 47.619 0.00 0.00 0.00 4.79
3953 5434 3.955524 TTCCTTATAAATTGGGGCCGA 57.044 42.857 0.00 0.00 0.00 5.54
3954 5435 4.404394 AGTTTTCCTTATAAATTGGGGCCG 59.596 41.667 0.00 0.00 0.00 6.13
3955 5436 5.950544 AGTTTTCCTTATAAATTGGGGCC 57.049 39.130 0.00 0.00 0.00 5.80
3956 5437 6.837048 TCCTAGTTTTCCTTATAAATTGGGGC 59.163 38.462 0.00 0.00 0.00 5.80
3957 5438 7.837187 TGTCCTAGTTTTCCTTATAAATTGGGG 59.163 37.037 0.00 0.00 0.00 4.96
3958 5439 8.817092 TGTCCTAGTTTTCCTTATAAATTGGG 57.183 34.615 0.00 0.00 0.00 4.12
3965 5446 9.629878 TGTTTTGTTGTCCTAGTTTTCCTTATA 57.370 29.630 0.00 0.00 0.00 0.98
3966 5447 8.410912 GTGTTTTGTTGTCCTAGTTTTCCTTAT 58.589 33.333 0.00 0.00 0.00 1.73
3967 5448 7.393796 TGTGTTTTGTTGTCCTAGTTTTCCTTA 59.606 33.333 0.00 0.00 0.00 2.69
3968 5449 6.209788 TGTGTTTTGTTGTCCTAGTTTTCCTT 59.790 34.615 0.00 0.00 0.00 3.36
3969 5450 5.712917 TGTGTTTTGTTGTCCTAGTTTTCCT 59.287 36.000 0.00 0.00 0.00 3.36
3970 5451 5.956642 TGTGTTTTGTTGTCCTAGTTTTCC 58.043 37.500 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.