Multiple sequence alignment - TraesCS6D01G360400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G360400 chr6D 100.000 4458 0 0 1 4458 452101686 452097229 0.000000e+00 8233.0
1 TraesCS6D01G360400 chr6D 91.319 2396 133 34 1545 3902 462413263 462410905 0.000000e+00 3203.0
2 TraesCS6D01G360400 chr6D 98.051 1180 23 0 91 1270 462414828 462413649 0.000000e+00 2052.0
3 TraesCS6D01G360400 chr6D 100.000 94 0 0 1 94 462415822 462415729 1.650000e-39 174.0
4 TraesCS6D01G360400 chr6D 96.154 104 4 0 1305 1408 462413643 462413540 2.130000e-38 171.0
5 TraesCS6D01G360400 chr6D 93.694 111 7 0 4348 4458 462410905 462410795 2.760000e-37 167.0
6 TraesCS6D01G360400 chr6A 92.768 2005 93 18 1825 3796 609167660 609165675 0.000000e+00 2852.0
7 TraesCS6D01G360400 chr6A 84.185 1037 73 43 339 1336 609169220 609168236 0.000000e+00 922.0
8 TraesCS6D01G360400 chr6A 89.908 109 10 1 4350 4458 609165470 609165363 6.010000e-29 139.0
9 TraesCS6D01G360400 chr6A 83.217 143 21 2 1408 1549 609168193 609168053 1.300000e-25 128.0
10 TraesCS6D01G360400 chr6A 90.526 95 7 1 1 93 609170395 609170301 1.680000e-24 124.0
11 TraesCS6D01G360400 chr6A 88.073 109 5 2 3797 3904 609165571 609165470 6.060000e-24 122.0
12 TraesCS6D01G360400 chr6B 92.555 1370 80 10 1402 2761 704881289 704879932 0.000000e+00 1945.0
13 TraesCS6D01G360400 chr6B 85.258 1316 102 38 119 1378 704882740 704881461 0.000000e+00 1271.0
14 TraesCS6D01G360400 chr6B 84.793 434 41 15 3954 4369 704874354 704873928 3.210000e-111 412.0
15 TraesCS6D01G360400 chr6B 79.923 518 67 30 2966 3465 704879791 704879293 3.300000e-91 346.0
16 TraesCS6D01G360400 chr6B 95.556 45 2 0 1364 1408 704881437 704881393 6.190000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G360400 chr6D 452097229 452101686 4457 True 8233.000 8233 100.000000 1 4458 1 chr6D.!!$R1 4457
1 TraesCS6D01G360400 chr6D 462410795 462415822 5027 True 1153.400 3203 95.843600 1 4458 5 chr6D.!!$R2 4457
2 TraesCS6D01G360400 chr6A 609165363 609170395 5032 True 714.500 2852 88.112833 1 4458 6 chr6A.!!$R1 4457
3 TraesCS6D01G360400 chr6B 704879293 704882740 3447 True 908.775 1945 88.323000 119 3465 4 chr6B.!!$R2 3346

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
194 1432 1.583054 ACAACAAAGACGACCTGAGC 58.417 50.000 0.00 0.0 0.00 4.26 F
1362 2686 1.804748 CTTCACCGGTTTTCCTGCTAC 59.195 52.381 2.97 0.0 37.95 3.58 F
2472 4080 1.600636 TGCCAAGCAGGGACTTTCG 60.601 57.895 0.00 0.0 34.60 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1798 3340 0.771127 CCCCAGAGAAAAGGTGGTCA 59.229 55.000 0.00 0.00 0.00 4.02 R
3324 4979 1.527844 GATGATCTGGGCCAGGTGC 60.528 63.158 32.23 21.11 40.16 5.01 R
4205 5972 0.036483 TCCGTCAAAGCAGCTGCATA 60.036 50.000 38.24 18.59 45.16 3.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 1072 2.666526 GCTATAGCAGGGCACGCC 60.667 66.667 20.01 0.00 41.59 5.68
185 1423 3.192633 ACACAAGGACCAACAACAAAGAC 59.807 43.478 0.00 0.00 0.00 3.01
190 1428 2.285977 GACCAACAACAAAGACGACCT 58.714 47.619 0.00 0.00 0.00 3.85
194 1432 1.583054 ACAACAAAGACGACCTGAGC 58.417 50.000 0.00 0.00 0.00 4.26
916 2217 2.166664 CCAGTTCCTCTTCTCTTACCGG 59.833 54.545 0.00 0.00 0.00 5.28
1303 2627 3.460648 GGGATCTTCAGTGTTCCCG 57.539 57.895 7.22 0.00 38.59 5.14
1362 2686 1.804748 CTTCACCGGTTTTCCTGCTAC 59.195 52.381 2.97 0.00 37.95 3.58
1440 2925 8.749841 ACTGAATATAGATTTCATGAGCGTAC 57.250 34.615 0.00 0.00 32.94 3.67
1501 2989 2.054453 GCCCTCCATGAAACCTGGC 61.054 63.158 0.00 0.00 33.56 4.85
1677 3218 4.518249 GGAAGCTTGAATTAGCACCTACT 58.482 43.478 2.10 0.00 43.68 2.57
1705 3246 7.392766 TGTATGGATTTGTGATCCTAGGATT 57.607 36.000 25.25 8.44 38.95 3.01
1720 3261 2.676471 ATTGTTGCCTGTCCCGCC 60.676 61.111 0.00 0.00 0.00 6.13
1732 3274 1.961394 TGTCCCGCCTCTGTGTATATC 59.039 52.381 0.00 0.00 0.00 1.63
1744 3286 5.301555 TCTGTGTATATCTCTCTGTCTCCG 58.698 45.833 0.00 0.00 0.00 4.63
1765 3307 8.253810 TCTCCGGATTATTCATCTGTTGATATC 58.746 37.037 3.57 0.00 36.61 1.63
1798 3340 4.039488 TGAATTGCTCAAAGTTCCAGCATT 59.961 37.500 9.01 4.23 42.65 3.56
1830 3438 5.388599 TTCTCTGGGGTTTCTTCTTTCTT 57.611 39.130 0.00 0.00 0.00 2.52
1838 3446 7.237982 TGGGGTTTCTTCTTTCTTGATGATAA 58.762 34.615 0.00 0.00 0.00 1.75
1916 3524 8.582657 TTTACTTCAGATCTGCTCTTAGTAGT 57.417 34.615 18.36 11.63 33.41 2.73
2202 3810 3.684788 ACCATCGCAGAAGTTGATGTTAC 59.315 43.478 1.34 0.00 43.58 2.50
2472 4080 1.600636 TGCCAAGCAGGGACTTTCG 60.601 57.895 0.00 0.00 34.60 3.46
2514 4122 7.031226 TGCCTTTGAAGACAATTCTATATGC 57.969 36.000 0.00 0.00 35.85 3.14
2519 4127 7.841915 TTGAAGACAATTCTATATGCGTTCA 57.158 32.000 0.00 0.00 0.00 3.18
2521 4129 8.076714 TGAAGACAATTCTATATGCGTTCATC 57.923 34.615 0.00 0.00 34.22 2.92
2543 4151 6.641169 TCGTCTCTAGTATGCATCATCTTT 57.359 37.500 0.19 0.00 0.00 2.52
2761 4371 7.419204 TGTTTACTGTTTTACCACAAGCATAC 58.581 34.615 0.00 0.00 0.00 2.39
2781 4391 9.445878 AGCATACATTATGAAAGATGGTATCTG 57.554 33.333 0.00 0.00 37.79 2.90
2823 4433 8.519492 GCAAATTGTCATGCTAAAGTAAAGAA 57.481 30.769 0.00 0.00 39.46 2.52
2824 4434 8.427774 GCAAATTGTCATGCTAAAGTAAAGAAC 58.572 33.333 0.00 0.00 39.46 3.01
2825 4435 9.462174 CAAATTGTCATGCTAAAGTAAAGAACA 57.538 29.630 0.00 0.00 0.00 3.18
2826 4436 9.683069 AAATTGTCATGCTAAAGTAAAGAACAG 57.317 29.630 0.00 0.00 0.00 3.16
2827 4437 8.621532 ATTGTCATGCTAAAGTAAAGAACAGA 57.378 30.769 0.00 0.00 0.00 3.41
2828 4438 7.658179 TGTCATGCTAAAGTAAAGAACAGAG 57.342 36.000 0.00 0.00 0.00 3.35
2829 4439 7.441836 TGTCATGCTAAAGTAAAGAACAGAGA 58.558 34.615 0.00 0.00 0.00 3.10
2830 4440 8.097038 TGTCATGCTAAAGTAAAGAACAGAGAT 58.903 33.333 0.00 0.00 0.00 2.75
2831 4441 8.386606 GTCATGCTAAAGTAAAGAACAGAGATG 58.613 37.037 0.00 0.00 0.00 2.90
2832 4442 8.314021 TCATGCTAAAGTAAAGAACAGAGATGA 58.686 33.333 0.00 0.00 0.00 2.92
2833 4443 8.939929 CATGCTAAAGTAAAGAACAGAGATGAA 58.060 33.333 0.00 0.00 0.00 2.57
2834 4444 9.678260 ATGCTAAAGTAAAGAACAGAGATGAAT 57.322 29.630 0.00 0.00 0.00 2.57
3385 5041 3.182972 CACACCGGTCACTTTTTACGTAG 59.817 47.826 2.59 0.00 0.00 3.51
3403 5059 6.276832 ACGTAGATGTTAACATGTGTACCT 57.723 37.500 25.42 16.24 36.57 3.08
3566 5222 2.750948 GCCCTTTTCCGGTTCTTTTTC 58.249 47.619 0.00 0.00 0.00 2.29
3570 5226 0.669619 TTTCCGGTTCTTTTTCGGGC 59.330 50.000 0.00 0.00 43.54 6.13
3708 5371 0.319813 GTTTGCCTGTGGATTGTGCC 60.320 55.000 0.00 0.00 0.00 5.01
3719 5382 3.624861 GTGGATTGTGCCTATCTTCTGTG 59.375 47.826 0.00 0.00 0.00 3.66
3867 5634 6.347725 CCTCTTCCGTTTTCATTTACTCTGTG 60.348 42.308 0.00 0.00 0.00 3.66
3904 5671 9.063615 ACCCTAAGTCAAACTTTACAAACTATG 57.936 33.333 0.00 0.00 39.51 2.23
3905 5672 8.512138 CCCTAAGTCAAACTTTACAAACTATGG 58.488 37.037 0.00 0.00 39.51 2.74
3906 5673 8.021396 CCTAAGTCAAACTTTACAAACTATGGC 58.979 37.037 0.00 0.00 39.51 4.40
3907 5674 6.327279 AGTCAAACTTTACAAACTATGGCC 57.673 37.500 0.00 0.00 0.00 5.36
3908 5675 5.830991 AGTCAAACTTTACAAACTATGGCCA 59.169 36.000 8.56 8.56 0.00 5.36
3909 5676 6.322712 AGTCAAACTTTACAAACTATGGCCAA 59.677 34.615 10.96 0.00 0.00 4.52
3910 5677 6.981559 GTCAAACTTTACAAACTATGGCCAAA 59.018 34.615 10.96 0.00 0.00 3.28
3911 5678 7.655732 GTCAAACTTTACAAACTATGGCCAAAT 59.344 33.333 10.96 0.00 0.00 2.32
3912 5679 8.207545 TCAAACTTTACAAACTATGGCCAAATT 58.792 29.630 10.96 0.66 0.00 1.82
3913 5680 8.835439 CAAACTTTACAAACTATGGCCAAATTT 58.165 29.630 10.96 8.06 0.00 1.82
3914 5681 8.972458 AACTTTACAAACTATGGCCAAATTTT 57.028 26.923 10.96 6.24 0.00 1.82
3915 5682 8.376889 ACTTTACAAACTATGGCCAAATTTTG 57.623 30.769 24.29 24.29 0.00 2.44
3916 5683 8.207545 ACTTTACAAACTATGGCCAAATTTTGA 58.792 29.630 29.19 16.99 0.00 2.69
3917 5684 8.600449 TTTACAAACTATGGCCAAATTTTGAG 57.400 30.769 29.19 14.49 0.00 3.02
3918 5685 5.550290 ACAAACTATGGCCAAATTTTGAGG 58.450 37.500 29.19 14.21 0.00 3.86
3919 5686 4.824479 AACTATGGCCAAATTTTGAGGG 57.176 40.909 10.96 0.00 0.00 4.30
3920 5687 3.790126 ACTATGGCCAAATTTTGAGGGT 58.210 40.909 10.96 0.00 0.00 4.34
3921 5688 4.941713 ACTATGGCCAAATTTTGAGGGTA 58.058 39.130 10.96 0.00 0.00 3.69
3922 5689 5.337788 ACTATGGCCAAATTTTGAGGGTAA 58.662 37.500 10.96 0.00 0.00 2.85
3923 5690 4.824479 ATGGCCAAATTTTGAGGGTAAG 57.176 40.909 10.96 0.00 0.00 2.34
3924 5691 2.301583 TGGCCAAATTTTGAGGGTAAGC 59.698 45.455 0.61 3.62 0.00 3.09
3925 5692 2.567169 GGCCAAATTTTGAGGGTAAGCT 59.433 45.455 10.72 0.00 0.00 3.74
3926 5693 3.767131 GGCCAAATTTTGAGGGTAAGCTA 59.233 43.478 10.72 0.00 0.00 3.32
3927 5694 4.381612 GGCCAAATTTTGAGGGTAAGCTAC 60.382 45.833 10.72 0.00 0.00 3.58
3928 5695 4.462834 GCCAAATTTTGAGGGTAAGCTACT 59.537 41.667 10.72 0.00 0.00 2.57
3929 5696 5.650703 GCCAAATTTTGAGGGTAAGCTACTA 59.349 40.000 10.72 0.00 0.00 1.82
3930 5697 6.183360 GCCAAATTTTGAGGGTAAGCTACTAG 60.183 42.308 10.72 0.00 0.00 2.57
3931 5698 7.110155 CCAAATTTTGAGGGTAAGCTACTAGA 58.890 38.462 10.72 0.00 0.00 2.43
3932 5699 7.610305 CCAAATTTTGAGGGTAAGCTACTAGAA 59.390 37.037 10.72 0.00 0.00 2.10
3933 5700 9.010029 CAAATTTTGAGGGTAAGCTACTAGAAA 57.990 33.333 2.88 0.00 0.00 2.52
3934 5701 9.755122 AAATTTTGAGGGTAAGCTACTAGAAAT 57.245 29.630 0.00 0.00 0.00 2.17
3935 5702 8.738645 ATTTTGAGGGTAAGCTACTAGAAATG 57.261 34.615 0.00 0.00 0.00 2.32
3936 5703 5.277857 TGAGGGTAAGCTACTAGAAATGC 57.722 43.478 0.00 0.00 0.00 3.56
3937 5704 4.714802 TGAGGGTAAGCTACTAGAAATGCA 59.285 41.667 0.00 0.00 0.00 3.96
3938 5705 5.024785 AGGGTAAGCTACTAGAAATGCAC 57.975 43.478 0.00 0.00 0.00 4.57
3939 5706 4.717280 AGGGTAAGCTACTAGAAATGCACT 59.283 41.667 0.00 0.00 0.00 4.40
3940 5707 5.051153 GGGTAAGCTACTAGAAATGCACTC 58.949 45.833 0.00 0.00 0.00 3.51
3941 5708 5.051153 GGTAAGCTACTAGAAATGCACTCC 58.949 45.833 0.00 0.00 0.00 3.85
3942 5709 5.163395 GGTAAGCTACTAGAAATGCACTCCT 60.163 44.000 0.00 0.00 0.00 3.69
3943 5710 5.428184 AAGCTACTAGAAATGCACTCCTT 57.572 39.130 0.00 0.00 0.00 3.36
3944 5711 6.546428 AAGCTACTAGAAATGCACTCCTTA 57.454 37.500 0.00 0.00 0.00 2.69
3945 5712 6.546428 AGCTACTAGAAATGCACTCCTTAA 57.454 37.500 0.00 0.00 0.00 1.85
3946 5713 6.342111 AGCTACTAGAAATGCACTCCTTAAC 58.658 40.000 0.00 0.00 0.00 2.01
3947 5714 6.155393 AGCTACTAGAAATGCACTCCTTAACT 59.845 38.462 0.00 0.00 0.00 2.24
3948 5715 7.342284 AGCTACTAGAAATGCACTCCTTAACTA 59.658 37.037 0.00 0.00 0.00 2.24
3949 5716 7.980099 GCTACTAGAAATGCACTCCTTAACTAA 59.020 37.037 0.00 0.00 0.00 2.24
3952 5719 9.819267 ACTAGAAATGCACTCCTTAACTAATAC 57.181 33.333 0.00 0.00 0.00 1.89
3954 5721 8.950208 AGAAATGCACTCCTTAACTAATACTC 57.050 34.615 0.00 0.00 0.00 2.59
3955 5722 8.763601 AGAAATGCACTCCTTAACTAATACTCT 58.236 33.333 0.00 0.00 0.00 3.24
3956 5723 8.723942 AAATGCACTCCTTAACTAATACTCTG 57.276 34.615 0.00 0.00 0.00 3.35
3957 5724 7.661536 ATGCACTCCTTAACTAATACTCTGA 57.338 36.000 0.00 0.00 0.00 3.27
3958 5725 7.476540 TGCACTCCTTAACTAATACTCTGAA 57.523 36.000 0.00 0.00 0.00 3.02
3959 5726 7.321153 TGCACTCCTTAACTAATACTCTGAAC 58.679 38.462 0.00 0.00 0.00 3.18
3960 5727 7.178628 TGCACTCCTTAACTAATACTCTGAACT 59.821 37.037 0.00 0.00 0.00 3.01
3961 5728 7.489757 GCACTCCTTAACTAATACTCTGAACTG 59.510 40.741 0.00 0.00 0.00 3.16
3962 5729 8.740906 CACTCCTTAACTAATACTCTGAACTGA 58.259 37.037 0.00 0.00 0.00 3.41
3963 5730 8.962679 ACTCCTTAACTAATACTCTGAACTGAG 58.037 37.037 7.07 7.07 39.78 3.35
3964 5731 8.294954 TCCTTAACTAATACTCTGAACTGAGG 57.705 38.462 11.99 0.00 38.32 3.86
3965 5732 7.894364 TCCTTAACTAATACTCTGAACTGAGGT 59.106 37.037 11.99 0.00 38.32 3.85
3966 5733 7.976734 CCTTAACTAATACTCTGAACTGAGGTG 59.023 40.741 11.99 2.36 38.32 4.00
3967 5734 5.923733 ACTAATACTCTGAACTGAGGTGG 57.076 43.478 11.99 3.67 38.32 4.61
3968 5735 5.334421 ACTAATACTCTGAACTGAGGTGGT 58.666 41.667 11.99 4.14 38.32 4.16
3969 5736 5.780793 ACTAATACTCTGAACTGAGGTGGTT 59.219 40.000 11.99 0.00 38.32 3.67
3970 5737 2.918712 ACTCTGAACTGAGGTGGTTG 57.081 50.000 11.99 0.00 38.32 3.77
3971 5738 1.202698 ACTCTGAACTGAGGTGGTTGC 60.203 52.381 11.99 0.00 38.32 4.17
3972 5739 0.108585 TCTGAACTGAGGTGGTTGCC 59.891 55.000 0.00 0.00 0.00 4.52
3973 5740 0.109342 CTGAACTGAGGTGGTTGCCT 59.891 55.000 0.00 0.00 42.53 4.75
3980 5747 3.577389 AGGTGGTTGCCTCTAATGC 57.423 52.632 0.00 0.00 32.39 3.56
3981 5748 0.392998 AGGTGGTTGCCTCTAATGCG 60.393 55.000 0.00 0.00 32.39 4.73
3982 5749 0.676782 GGTGGTTGCCTCTAATGCGT 60.677 55.000 0.00 0.00 0.00 5.24
3983 5750 1.165270 GTGGTTGCCTCTAATGCGTT 58.835 50.000 0.00 0.00 0.00 4.84
3984 5751 1.135689 GTGGTTGCCTCTAATGCGTTG 60.136 52.381 0.08 0.00 0.00 4.10
3985 5752 1.271108 TGGTTGCCTCTAATGCGTTGA 60.271 47.619 0.08 0.00 0.00 3.18
3986 5753 2.017049 GGTTGCCTCTAATGCGTTGAT 58.983 47.619 0.08 0.00 0.00 2.57
3987 5754 2.223340 GGTTGCCTCTAATGCGTTGATG 60.223 50.000 0.08 0.00 0.00 3.07
3988 5755 1.016627 TGCCTCTAATGCGTTGATGC 58.983 50.000 0.08 6.45 0.00 3.91
3989 5756 0.308993 GCCTCTAATGCGTTGATGCC 59.691 55.000 0.08 0.00 0.00 4.40
3990 5757 0.947244 CCTCTAATGCGTTGATGCCC 59.053 55.000 0.08 0.00 0.00 5.36
3991 5758 0.583438 CTCTAATGCGTTGATGCCCG 59.417 55.000 0.08 0.00 0.00 6.13
3992 5759 0.107897 TCTAATGCGTTGATGCCCGT 60.108 50.000 0.08 0.00 0.00 5.28
3993 5760 0.732571 CTAATGCGTTGATGCCCGTT 59.267 50.000 0.08 0.00 0.00 4.44
3994 5761 1.132262 CTAATGCGTTGATGCCCGTTT 59.868 47.619 0.08 0.00 0.00 3.60
3995 5762 0.316841 AATGCGTTGATGCCCGTTTT 59.683 45.000 0.00 0.00 0.00 2.43
3996 5763 0.109319 ATGCGTTGATGCCCGTTTTC 60.109 50.000 0.00 0.00 0.00 2.29
3997 5764 1.284408 GCGTTGATGCCCGTTTTCA 59.716 52.632 0.00 0.00 0.00 2.69
3998 5765 0.729140 GCGTTGATGCCCGTTTTCAG 60.729 55.000 0.00 0.00 0.00 3.02
3999 5766 0.109781 CGTTGATGCCCGTTTTCAGG 60.110 55.000 0.00 0.00 0.00 3.86
4005 5772 4.821935 CCCGTTTTCAGGGCTCTT 57.178 55.556 0.00 0.00 42.77 2.85
4006 5773 3.036431 CCCGTTTTCAGGGCTCTTT 57.964 52.632 0.00 0.00 42.77 2.52
4007 5774 1.328279 CCCGTTTTCAGGGCTCTTTT 58.672 50.000 0.00 0.00 42.77 2.27
4008 5775 1.269723 CCCGTTTTCAGGGCTCTTTTC 59.730 52.381 0.00 0.00 42.77 2.29
4009 5776 1.953686 CCGTTTTCAGGGCTCTTTTCA 59.046 47.619 0.00 0.00 0.00 2.69
4010 5777 2.287608 CCGTTTTCAGGGCTCTTTTCAC 60.288 50.000 0.00 0.00 0.00 3.18
4011 5778 2.357637 CGTTTTCAGGGCTCTTTTCACA 59.642 45.455 0.00 0.00 0.00 3.58
4012 5779 3.181491 CGTTTTCAGGGCTCTTTTCACAA 60.181 43.478 0.00 0.00 0.00 3.33
4013 5780 4.676723 CGTTTTCAGGGCTCTTTTCACAAA 60.677 41.667 0.00 0.00 0.00 2.83
4014 5781 5.175127 GTTTTCAGGGCTCTTTTCACAAAA 58.825 37.500 0.00 0.00 0.00 2.44
4015 5782 5.413309 TTTCAGGGCTCTTTTCACAAAAA 57.587 34.783 0.00 0.00 33.42 1.94
4029 5796 7.489574 TTTCACAAAAAGAAACTTTGCAACT 57.510 28.000 0.00 0.00 37.29 3.16
4030 5797 7.489574 TTCACAAAAAGAAACTTTGCAACTT 57.510 28.000 0.00 0.00 37.29 2.66
4031 5798 7.489574 TCACAAAAAGAAACTTTGCAACTTT 57.510 28.000 0.00 2.08 37.29 2.66
4032 5799 8.594881 TCACAAAAAGAAACTTTGCAACTTTA 57.405 26.923 11.15 0.00 37.29 1.85
4033 5800 9.213799 TCACAAAAAGAAACTTTGCAACTTTAT 57.786 25.926 11.15 2.19 37.29 1.40
4034 5801 9.476761 CACAAAAAGAAACTTTGCAACTTTATC 57.523 29.630 11.15 2.35 37.29 1.75
4035 5802 9.213799 ACAAAAAGAAACTTTGCAACTTTATCA 57.786 25.926 11.15 0.00 37.29 2.15
4036 5803 9.476761 CAAAAAGAAACTTTGCAACTTTATCAC 57.523 29.630 11.15 0.00 31.86 3.06
4037 5804 7.770801 AAAGAAACTTTGCAACTTTATCACC 57.229 32.000 9.52 0.00 0.00 4.02
4038 5805 6.463995 AGAAACTTTGCAACTTTATCACCA 57.536 33.333 0.00 0.00 0.00 4.17
4039 5806 7.054491 AGAAACTTTGCAACTTTATCACCAT 57.946 32.000 0.00 0.00 0.00 3.55
4040 5807 7.147976 AGAAACTTTGCAACTTTATCACCATC 58.852 34.615 0.00 0.00 0.00 3.51
4041 5808 6.655078 AACTTTGCAACTTTATCACCATCT 57.345 33.333 0.00 0.00 0.00 2.90
4042 5809 6.655078 ACTTTGCAACTTTATCACCATCTT 57.345 33.333 0.00 0.00 0.00 2.40
4043 5810 6.681777 ACTTTGCAACTTTATCACCATCTTC 58.318 36.000 0.00 0.00 0.00 2.87
4044 5811 4.944962 TGCAACTTTATCACCATCTTCG 57.055 40.909 0.00 0.00 0.00 3.79
4045 5812 4.574892 TGCAACTTTATCACCATCTTCGA 58.425 39.130 0.00 0.00 0.00 3.71
4046 5813 4.631377 TGCAACTTTATCACCATCTTCGAG 59.369 41.667 0.00 0.00 0.00 4.04
4047 5814 4.034510 GCAACTTTATCACCATCTTCGAGG 59.965 45.833 0.00 0.00 0.00 4.63
4048 5815 3.798202 ACTTTATCACCATCTTCGAGGC 58.202 45.455 0.00 0.00 0.00 4.70
4049 5816 2.910688 TTATCACCATCTTCGAGGCC 57.089 50.000 0.00 0.00 0.00 5.19
4050 5817 0.673985 TATCACCATCTTCGAGGCCG 59.326 55.000 0.00 0.00 37.07 6.13
4051 5818 2.650813 ATCACCATCTTCGAGGCCGC 62.651 60.000 0.00 0.00 35.37 6.53
4052 5819 3.077556 ACCATCTTCGAGGCCGCT 61.078 61.111 4.53 0.00 35.37 5.52
4053 5820 2.187946 CCATCTTCGAGGCCGCTT 59.812 61.111 4.53 0.00 35.37 4.68
4054 5821 2.176273 CCATCTTCGAGGCCGCTTG 61.176 63.158 4.53 0.00 35.37 4.01
4055 5822 2.512515 ATCTTCGAGGCCGCTTGC 60.513 61.111 4.53 0.00 40.16 4.01
4066 5833 3.945434 CGCTTGCCATGGCGCTAG 61.945 66.667 30.87 25.94 44.64 3.42
4078 5845 1.638467 GCGCTAGCAAGACGATTGG 59.362 57.895 16.45 0.00 44.35 3.16
4079 5846 1.084370 GCGCTAGCAAGACGATTGGT 61.084 55.000 16.45 12.82 44.35 3.67
4080 5847 1.359848 CGCTAGCAAGACGATTGGTT 58.640 50.000 16.45 0.00 0.00 3.67
4081 5848 1.324736 CGCTAGCAAGACGATTGGTTC 59.675 52.381 16.45 7.00 0.00 3.62
4082 5849 1.666189 GCTAGCAAGACGATTGGTTCC 59.334 52.381 10.63 4.13 0.00 3.62
4083 5850 2.280628 CTAGCAAGACGATTGGTTCCC 58.719 52.381 13.32 0.00 0.00 3.97
4084 5851 0.322546 AGCAAGACGATTGGTTCCCC 60.323 55.000 0.00 0.00 0.00 4.81
4085 5852 1.313091 GCAAGACGATTGGTTCCCCC 61.313 60.000 0.00 0.00 0.00 5.40
4086 5853 0.037590 CAAGACGATTGGTTCCCCCA 59.962 55.000 0.00 0.00 43.27 4.96
4087 5854 0.999712 AAGACGATTGGTTCCCCCAT 59.000 50.000 0.00 0.00 44.74 4.00
4088 5855 1.887797 AGACGATTGGTTCCCCCATA 58.112 50.000 0.00 0.00 44.74 2.74
4089 5856 2.201830 AGACGATTGGTTCCCCCATAA 58.798 47.619 0.00 0.00 44.74 1.90
4090 5857 2.578940 AGACGATTGGTTCCCCCATAAA 59.421 45.455 0.00 0.00 44.74 1.40
4091 5858 2.686405 GACGATTGGTTCCCCCATAAAC 59.314 50.000 0.00 0.00 44.74 2.01
4092 5859 1.673920 CGATTGGTTCCCCCATAAACG 59.326 52.381 0.00 0.00 44.74 3.60
4093 5860 2.681390 CGATTGGTTCCCCCATAAACGA 60.681 50.000 0.00 0.00 44.74 3.85
4094 5861 2.500392 TTGGTTCCCCCATAAACGAG 57.500 50.000 0.00 0.00 44.74 4.18
4095 5862 1.659022 TGGTTCCCCCATAAACGAGA 58.341 50.000 0.00 0.00 38.72 4.04
4096 5863 1.986631 TGGTTCCCCCATAAACGAGAA 59.013 47.619 0.00 0.00 38.72 2.87
4097 5864 2.026636 TGGTTCCCCCATAAACGAGAAG 60.027 50.000 0.00 0.00 38.72 2.85
4098 5865 2.640184 GTTCCCCCATAAACGAGAAGG 58.360 52.381 0.00 0.00 0.00 3.46
4099 5866 0.544697 TCCCCCATAAACGAGAAGGC 59.455 55.000 0.00 0.00 0.00 4.35
4100 5867 0.254747 CCCCCATAAACGAGAAGGCA 59.745 55.000 0.00 0.00 0.00 4.75
4101 5868 1.340600 CCCCCATAAACGAGAAGGCAA 60.341 52.381 0.00 0.00 0.00 4.52
4102 5869 2.654863 CCCCATAAACGAGAAGGCAAT 58.345 47.619 0.00 0.00 0.00 3.56
4103 5870 2.618709 CCCCATAAACGAGAAGGCAATC 59.381 50.000 0.00 0.00 0.00 2.67
4104 5871 3.278574 CCCATAAACGAGAAGGCAATCA 58.721 45.455 0.00 0.00 0.00 2.57
4105 5872 3.885297 CCCATAAACGAGAAGGCAATCAT 59.115 43.478 0.00 0.00 0.00 2.45
4106 5873 4.339247 CCCATAAACGAGAAGGCAATCATT 59.661 41.667 0.00 0.00 0.00 2.57
4107 5874 5.530915 CCCATAAACGAGAAGGCAATCATTA 59.469 40.000 0.00 0.00 0.00 1.90
4108 5875 6.293626 CCCATAAACGAGAAGGCAATCATTAG 60.294 42.308 0.00 0.00 0.00 1.73
4109 5876 6.293626 CCATAAACGAGAAGGCAATCATTAGG 60.294 42.308 0.00 0.00 0.00 2.69
4110 5877 4.487714 AACGAGAAGGCAATCATTAGGA 57.512 40.909 0.00 0.00 0.00 2.94
4111 5878 4.487714 ACGAGAAGGCAATCATTAGGAA 57.512 40.909 0.00 0.00 0.00 3.36
4112 5879 4.843728 ACGAGAAGGCAATCATTAGGAAA 58.156 39.130 0.00 0.00 0.00 3.13
4113 5880 5.440610 ACGAGAAGGCAATCATTAGGAAAT 58.559 37.500 0.00 0.00 0.00 2.17
4114 5881 5.297776 ACGAGAAGGCAATCATTAGGAAATG 59.702 40.000 0.00 0.00 43.32 2.32
4115 5882 5.526506 AGAAGGCAATCATTAGGAAATGC 57.473 39.130 0.50 0.50 41.96 3.56
4116 5883 4.957954 AGAAGGCAATCATTAGGAAATGCA 59.042 37.500 9.47 0.00 41.96 3.96
4117 5884 5.422970 AGAAGGCAATCATTAGGAAATGCAA 59.577 36.000 9.47 0.00 41.96 4.08
4118 5885 5.272283 AGGCAATCATTAGGAAATGCAAG 57.728 39.130 9.47 0.00 41.96 4.01
4119 5886 4.957954 AGGCAATCATTAGGAAATGCAAGA 59.042 37.500 9.47 0.00 41.96 3.02
4120 5887 5.422970 AGGCAATCATTAGGAAATGCAAGAA 59.577 36.000 9.47 0.00 41.96 2.52
4121 5888 5.751990 GGCAATCATTAGGAAATGCAAGAAG 59.248 40.000 9.47 0.00 41.96 2.85
4122 5889 6.335777 GCAATCATTAGGAAATGCAAGAAGT 58.664 36.000 0.00 0.00 41.96 3.01
4123 5890 6.255020 GCAATCATTAGGAAATGCAAGAAGTG 59.745 38.462 0.00 0.00 41.96 3.16
4124 5891 5.902613 TCATTAGGAAATGCAAGAAGTGG 57.097 39.130 0.00 0.00 41.96 4.00
4125 5892 4.706476 TCATTAGGAAATGCAAGAAGTGGG 59.294 41.667 0.00 0.00 41.96 4.61
4126 5893 2.683211 AGGAAATGCAAGAAGTGGGT 57.317 45.000 0.00 0.00 0.00 4.51
4127 5894 2.242043 AGGAAATGCAAGAAGTGGGTG 58.758 47.619 0.00 0.00 0.00 4.61
4128 5895 1.337167 GGAAATGCAAGAAGTGGGTGC 60.337 52.381 0.00 0.00 38.78 5.01
4129 5896 1.615392 GAAATGCAAGAAGTGGGTGCT 59.385 47.619 0.00 0.00 39.09 4.40
4130 5897 1.251251 AATGCAAGAAGTGGGTGCTC 58.749 50.000 0.00 0.00 39.09 4.26
4131 5898 0.403271 ATGCAAGAAGTGGGTGCTCT 59.597 50.000 0.00 0.00 39.09 4.09
4132 5899 1.055849 TGCAAGAAGTGGGTGCTCTA 58.944 50.000 0.00 0.00 39.09 2.43
4133 5900 1.630369 TGCAAGAAGTGGGTGCTCTAT 59.370 47.619 0.00 0.00 39.09 1.98
4134 5901 2.284190 GCAAGAAGTGGGTGCTCTATC 58.716 52.381 0.00 0.00 35.36 2.08
4135 5902 2.093235 GCAAGAAGTGGGTGCTCTATCT 60.093 50.000 0.00 0.00 35.36 1.98
4136 5903 3.620966 GCAAGAAGTGGGTGCTCTATCTT 60.621 47.826 0.00 0.00 35.36 2.40
4137 5904 4.583871 CAAGAAGTGGGTGCTCTATCTTT 58.416 43.478 0.00 0.00 0.00 2.52
4138 5905 4.213564 AGAAGTGGGTGCTCTATCTTTG 57.786 45.455 0.00 0.00 0.00 2.77
4139 5906 3.840666 AGAAGTGGGTGCTCTATCTTTGA 59.159 43.478 0.00 0.00 0.00 2.69
4140 5907 4.472833 AGAAGTGGGTGCTCTATCTTTGAT 59.527 41.667 0.00 0.00 0.00 2.57
4141 5908 4.414337 AGTGGGTGCTCTATCTTTGATC 57.586 45.455 0.00 0.00 0.00 2.92
4142 5909 3.135530 AGTGGGTGCTCTATCTTTGATCC 59.864 47.826 0.00 0.00 0.00 3.36
4143 5910 2.103094 TGGGTGCTCTATCTTTGATCCG 59.897 50.000 0.00 0.00 0.00 4.18
4144 5911 2.365617 GGGTGCTCTATCTTTGATCCGA 59.634 50.000 0.00 0.00 0.00 4.55
4145 5912 3.385577 GGTGCTCTATCTTTGATCCGAC 58.614 50.000 0.00 0.00 0.00 4.79
4146 5913 3.181475 GGTGCTCTATCTTTGATCCGACA 60.181 47.826 0.00 0.00 0.00 4.35
4147 5914 4.502259 GGTGCTCTATCTTTGATCCGACAT 60.502 45.833 0.00 0.00 0.00 3.06
4148 5915 4.683781 GTGCTCTATCTTTGATCCGACATC 59.316 45.833 0.00 0.00 0.00 3.06
4149 5916 4.586421 TGCTCTATCTTTGATCCGACATCT 59.414 41.667 0.00 0.00 0.00 2.90
4150 5917 5.069648 TGCTCTATCTTTGATCCGACATCTT 59.930 40.000 0.00 0.00 0.00 2.40
4151 5918 5.404968 GCTCTATCTTTGATCCGACATCTTG 59.595 44.000 0.00 0.00 0.00 3.02
4152 5919 5.847304 TCTATCTTTGATCCGACATCTTGG 58.153 41.667 0.00 0.00 0.00 3.61
4153 5920 4.760530 ATCTTTGATCCGACATCTTGGA 57.239 40.909 0.00 0.00 38.95 3.53
4154 5921 4.128925 TCTTTGATCCGACATCTTGGAG 57.871 45.455 0.00 0.00 37.76 3.86
4155 5922 2.988010 TTGATCCGACATCTTGGAGG 57.012 50.000 0.00 0.00 37.76 4.30
4156 5923 2.159179 TGATCCGACATCTTGGAGGA 57.841 50.000 0.00 0.00 37.76 3.71
4157 5924 2.034878 TGATCCGACATCTTGGAGGAG 58.965 52.381 0.00 0.00 37.76 3.69
4158 5925 2.311463 GATCCGACATCTTGGAGGAGA 58.689 52.381 0.00 0.00 37.76 3.71
4159 5926 2.231716 TCCGACATCTTGGAGGAGAA 57.768 50.000 0.00 0.00 0.00 2.87
4160 5927 2.103373 TCCGACATCTTGGAGGAGAAG 58.897 52.381 0.00 0.00 0.00 2.85
4161 5928 1.827969 CCGACATCTTGGAGGAGAAGT 59.172 52.381 0.00 0.00 30.90 3.01
4162 5929 2.159170 CCGACATCTTGGAGGAGAAGTC 60.159 54.545 1.39 1.39 39.66 3.01
4163 5930 2.757868 CGACATCTTGGAGGAGAAGTCT 59.242 50.000 8.15 0.00 40.44 3.24
4164 5931 3.194542 CGACATCTTGGAGGAGAAGTCTT 59.805 47.826 8.15 0.00 40.44 3.01
4165 5932 4.322349 CGACATCTTGGAGGAGAAGTCTTT 60.322 45.833 8.15 0.00 40.44 2.52
4166 5933 5.555966 GACATCTTGGAGGAGAAGTCTTTT 58.444 41.667 3.74 0.00 39.83 2.27
4167 5934 6.572509 CGACATCTTGGAGGAGAAGTCTTTTA 60.573 42.308 8.15 0.00 40.44 1.52
4168 5935 6.706295 ACATCTTGGAGGAGAAGTCTTTTAG 58.294 40.000 0.00 0.00 0.00 1.85
4169 5936 5.746990 TCTTGGAGGAGAAGTCTTTTAGG 57.253 43.478 0.00 0.00 0.00 2.69
4170 5937 5.403512 TCTTGGAGGAGAAGTCTTTTAGGA 58.596 41.667 0.00 0.00 0.00 2.94
4171 5938 5.482175 TCTTGGAGGAGAAGTCTTTTAGGAG 59.518 44.000 0.00 0.00 0.00 3.69
4172 5939 3.515901 TGGAGGAGAAGTCTTTTAGGAGC 59.484 47.826 0.00 0.00 0.00 4.70
4173 5940 3.515901 GGAGGAGAAGTCTTTTAGGAGCA 59.484 47.826 0.00 0.00 0.00 4.26
4174 5941 4.020128 GGAGGAGAAGTCTTTTAGGAGCAA 60.020 45.833 0.00 0.00 0.00 3.91
4175 5942 5.513267 GGAGGAGAAGTCTTTTAGGAGCAAA 60.513 44.000 0.00 0.00 0.00 3.68
4176 5943 5.941788 AGGAGAAGTCTTTTAGGAGCAAAA 58.058 37.500 0.00 0.00 0.00 2.44
4177 5944 6.000840 AGGAGAAGTCTTTTAGGAGCAAAAG 58.999 40.000 2.62 2.62 43.73 2.27
4178 5945 5.335269 GGAGAAGTCTTTTAGGAGCAAAAGC 60.335 44.000 3.94 0.00 42.63 3.51
4179 5946 5.133221 AGAAGTCTTTTAGGAGCAAAAGCA 58.867 37.500 3.94 0.00 42.63 3.91
4180 5947 5.594317 AGAAGTCTTTTAGGAGCAAAAGCAA 59.406 36.000 3.94 0.00 42.63 3.91
4181 5948 5.444663 AGTCTTTTAGGAGCAAAAGCAAG 57.555 39.130 3.94 0.00 42.63 4.01
4182 5949 5.133221 AGTCTTTTAGGAGCAAAAGCAAGA 58.867 37.500 3.94 0.00 42.63 3.02
4183 5950 5.594317 AGTCTTTTAGGAGCAAAAGCAAGAA 59.406 36.000 3.94 0.00 42.63 2.52
4184 5951 5.917447 GTCTTTTAGGAGCAAAAGCAAGAAG 59.083 40.000 3.94 0.00 42.63 2.85
4185 5952 5.827797 TCTTTTAGGAGCAAAAGCAAGAAGA 59.172 36.000 3.94 0.00 42.63 2.87
4186 5953 5.695851 TTTAGGAGCAAAAGCAAGAAGAG 57.304 39.130 0.00 0.00 0.00 2.85
4187 5954 3.220674 AGGAGCAAAAGCAAGAAGAGT 57.779 42.857 0.00 0.00 0.00 3.24
4188 5955 2.883386 AGGAGCAAAAGCAAGAAGAGTG 59.117 45.455 0.00 0.00 0.00 3.51
4189 5956 2.030451 GGAGCAAAAGCAAGAAGAGTGG 60.030 50.000 0.00 0.00 0.00 4.00
4190 5957 1.339291 AGCAAAAGCAAGAAGAGTGGC 59.661 47.619 0.00 0.00 0.00 5.01
4191 5958 1.067516 GCAAAAGCAAGAAGAGTGGCA 59.932 47.619 0.00 0.00 0.00 4.92
4192 5959 2.288640 GCAAAAGCAAGAAGAGTGGCAT 60.289 45.455 0.00 0.00 0.00 4.40
4193 5960 3.314553 CAAAAGCAAGAAGAGTGGCATG 58.685 45.455 0.00 0.00 0.00 4.06
4194 5961 2.574006 AAGCAAGAAGAGTGGCATGA 57.426 45.000 0.00 0.00 0.00 3.07
4195 5962 2.803030 AGCAAGAAGAGTGGCATGAT 57.197 45.000 0.00 0.00 0.00 2.45
4196 5963 3.920231 AGCAAGAAGAGTGGCATGATA 57.080 42.857 0.00 0.00 0.00 2.15
4197 5964 3.806380 AGCAAGAAGAGTGGCATGATAG 58.194 45.455 0.00 0.00 0.00 2.08
4198 5965 2.877168 GCAAGAAGAGTGGCATGATAGG 59.123 50.000 0.00 0.00 0.00 2.57
4199 5966 3.432749 GCAAGAAGAGTGGCATGATAGGA 60.433 47.826 0.00 0.00 0.00 2.94
4200 5967 4.774124 CAAGAAGAGTGGCATGATAGGAA 58.226 43.478 0.00 0.00 0.00 3.36
4201 5968 4.686191 AGAAGAGTGGCATGATAGGAAG 57.314 45.455 0.00 0.00 0.00 3.46
4202 5969 3.390639 AGAAGAGTGGCATGATAGGAAGG 59.609 47.826 0.00 0.00 0.00 3.46
4203 5970 1.419387 AGAGTGGCATGATAGGAAGGC 59.581 52.381 0.00 0.00 0.00 4.35
4204 5971 1.141657 GAGTGGCATGATAGGAAGGCA 59.858 52.381 0.00 0.00 0.00 4.75
4205 5972 1.779092 AGTGGCATGATAGGAAGGCAT 59.221 47.619 0.00 0.00 38.82 4.40
4206 5973 2.981784 AGTGGCATGATAGGAAGGCATA 59.018 45.455 0.00 0.00 38.82 3.14
4207 5974 3.590630 AGTGGCATGATAGGAAGGCATAT 59.409 43.478 0.00 0.00 38.82 1.78
4208 5975 3.693085 GTGGCATGATAGGAAGGCATATG 59.307 47.826 0.00 0.00 38.82 1.78
4209 5976 2.686915 GGCATGATAGGAAGGCATATGC 59.313 50.000 19.79 19.79 38.85 3.14
4210 5977 3.349927 GCATGATAGGAAGGCATATGCA 58.650 45.455 28.07 7.82 44.36 3.96
4211 5978 3.377485 GCATGATAGGAAGGCATATGCAG 59.623 47.826 28.07 4.95 44.36 4.41
4212 5979 3.063510 TGATAGGAAGGCATATGCAGC 57.936 47.619 28.07 15.98 44.36 5.25
4213 5980 2.641321 TGATAGGAAGGCATATGCAGCT 59.359 45.455 28.07 14.69 44.36 4.24
4214 5981 2.556144 TAGGAAGGCATATGCAGCTG 57.444 50.000 28.07 10.11 44.36 4.24
4215 5982 0.822532 AGGAAGGCATATGCAGCTGC 60.823 55.000 31.89 31.89 44.36 5.25
4216 5983 0.822532 GGAAGGCATATGCAGCTGCT 60.823 55.000 36.61 24.48 44.36 4.24
4217 5984 1.030457 GAAGGCATATGCAGCTGCTT 58.970 50.000 36.61 31.97 44.36 3.91
4218 5985 1.407979 GAAGGCATATGCAGCTGCTTT 59.592 47.619 36.61 26.11 44.36 3.51
4219 5986 0.744874 AGGCATATGCAGCTGCTTTG 59.255 50.000 36.61 28.90 44.36 2.77
4220 5987 0.742505 GGCATATGCAGCTGCTTTGA 59.257 50.000 36.61 19.33 44.36 2.69
4221 5988 1.535437 GGCATATGCAGCTGCTTTGAC 60.535 52.381 36.61 27.86 44.36 3.18
4222 5989 1.858798 GCATATGCAGCTGCTTTGACG 60.859 52.381 36.61 21.24 42.66 4.35
4223 5990 1.019673 ATATGCAGCTGCTTTGACGG 58.980 50.000 36.61 0.00 42.66 4.79
4224 5991 0.036483 TATGCAGCTGCTTTGACGGA 60.036 50.000 36.61 16.61 42.66 4.69
4225 5992 0.679002 ATGCAGCTGCTTTGACGGAT 60.679 50.000 36.61 18.17 42.66 4.18
4226 5993 1.136147 GCAGCTGCTTTGACGGATG 59.864 57.895 31.33 0.00 38.21 3.51
4227 5994 1.136147 CAGCTGCTTTGACGGATGC 59.864 57.895 0.00 0.00 0.00 3.91
4228 5995 1.302752 AGCTGCTTTGACGGATGCA 60.303 52.632 0.00 0.00 0.00 3.96
4229 5996 1.154150 GCTGCTTTGACGGATGCAC 60.154 57.895 0.00 0.00 0.00 4.57
4230 5997 1.133253 CTGCTTTGACGGATGCACG 59.867 57.895 0.00 0.00 40.31 5.34
4238 6005 3.225272 ACGGATGCACGTCATTTCA 57.775 47.368 0.00 0.00 45.08 2.69
4239 6006 1.078709 ACGGATGCACGTCATTTCAG 58.921 50.000 0.00 0.00 45.08 3.02
4240 6007 1.337728 ACGGATGCACGTCATTTCAGA 60.338 47.619 0.00 0.00 45.08 3.27
4241 6008 1.325640 CGGATGCACGTCATTTCAGAG 59.674 52.381 0.00 0.00 35.05 3.35
4242 6009 2.350522 GGATGCACGTCATTTCAGAGT 58.649 47.619 0.00 0.00 35.05 3.24
4243 6010 2.744202 GGATGCACGTCATTTCAGAGTT 59.256 45.455 0.00 0.00 35.05 3.01
4244 6011 3.425359 GGATGCACGTCATTTCAGAGTTG 60.425 47.826 0.00 0.00 35.05 3.16
4245 6012 2.560504 TGCACGTCATTTCAGAGTTGT 58.439 42.857 0.00 0.00 0.00 3.32
4246 6013 2.543848 TGCACGTCATTTCAGAGTTGTC 59.456 45.455 0.00 0.00 0.00 3.18
4247 6014 2.543848 GCACGTCATTTCAGAGTTGTCA 59.456 45.455 0.00 0.00 0.00 3.58
4248 6015 3.187227 GCACGTCATTTCAGAGTTGTCAT 59.813 43.478 0.00 0.00 0.00 3.06
4249 6016 4.319766 GCACGTCATTTCAGAGTTGTCATT 60.320 41.667 0.00 0.00 0.00 2.57
4250 6017 5.142265 CACGTCATTTCAGAGTTGTCATTG 58.858 41.667 0.00 0.00 0.00 2.82
4251 6018 4.816385 ACGTCATTTCAGAGTTGTCATTGT 59.184 37.500 0.00 0.00 0.00 2.71
4252 6019 5.142265 CGTCATTTCAGAGTTGTCATTGTG 58.858 41.667 0.00 0.00 0.00 3.33
4253 6020 5.277490 CGTCATTTCAGAGTTGTCATTGTGT 60.277 40.000 0.00 0.00 0.00 3.72
4254 6021 6.498304 GTCATTTCAGAGTTGTCATTGTGTT 58.502 36.000 0.00 0.00 0.00 3.32
4255 6022 6.974622 GTCATTTCAGAGTTGTCATTGTGTTT 59.025 34.615 0.00 0.00 0.00 2.83
4256 6023 7.489113 GTCATTTCAGAGTTGTCATTGTGTTTT 59.511 33.333 0.00 0.00 0.00 2.43
4257 6024 8.034215 TCATTTCAGAGTTGTCATTGTGTTTTT 58.966 29.630 0.00 0.00 0.00 1.94
4258 6025 7.579589 TTTCAGAGTTGTCATTGTGTTTTTG 57.420 32.000 0.00 0.00 0.00 2.44
4259 6026 6.266168 TCAGAGTTGTCATTGTGTTTTTGT 57.734 33.333 0.00 0.00 0.00 2.83
4260 6027 6.686630 TCAGAGTTGTCATTGTGTTTTTGTT 58.313 32.000 0.00 0.00 0.00 2.83
4261 6028 6.585702 TCAGAGTTGTCATTGTGTTTTTGTTG 59.414 34.615 0.00 0.00 0.00 3.33
4262 6029 5.868801 AGAGTTGTCATTGTGTTTTTGTTGG 59.131 36.000 0.00 0.00 0.00 3.77
4263 6030 4.934602 AGTTGTCATTGTGTTTTTGTTGGG 59.065 37.500 0.00 0.00 0.00 4.12
4264 6031 4.543590 TGTCATTGTGTTTTTGTTGGGT 57.456 36.364 0.00 0.00 0.00 4.51
4265 6032 5.661056 TGTCATTGTGTTTTTGTTGGGTA 57.339 34.783 0.00 0.00 0.00 3.69
4266 6033 5.411781 TGTCATTGTGTTTTTGTTGGGTAC 58.588 37.500 0.00 0.00 0.00 3.34
4286 6053 3.692257 CCTTTGTGAGGTCAGTGATCT 57.308 47.619 5.33 5.33 40.95 2.75
4287 6054 4.808414 CCTTTGTGAGGTCAGTGATCTA 57.192 45.455 5.72 0.00 40.95 1.98
4288 6055 5.350504 CCTTTGTGAGGTCAGTGATCTAT 57.649 43.478 5.72 0.00 40.95 1.98
4289 6056 5.114780 CCTTTGTGAGGTCAGTGATCTATG 58.885 45.833 5.72 0.00 40.95 2.23
4290 6057 5.337894 CCTTTGTGAGGTCAGTGATCTATGT 60.338 44.000 5.72 0.00 40.95 2.29
4291 6058 4.725790 TGTGAGGTCAGTGATCTATGTG 57.274 45.455 5.72 0.00 0.00 3.21
4292 6059 3.118992 TGTGAGGTCAGTGATCTATGTGC 60.119 47.826 5.72 0.00 0.00 4.57
4293 6060 2.432146 TGAGGTCAGTGATCTATGTGCC 59.568 50.000 5.72 0.00 0.00 5.01
4294 6061 2.432146 GAGGTCAGTGATCTATGTGCCA 59.568 50.000 5.72 0.00 0.00 4.92
4295 6062 2.433604 AGGTCAGTGATCTATGTGCCAG 59.566 50.000 3.39 0.00 0.00 4.85
4296 6063 2.208431 GTCAGTGATCTATGTGCCAGC 58.792 52.381 0.00 0.00 0.00 4.85
4297 6064 2.113807 TCAGTGATCTATGTGCCAGCT 58.886 47.619 0.00 0.00 0.00 4.24
4298 6065 2.159000 TCAGTGATCTATGTGCCAGCTG 60.159 50.000 6.78 6.78 0.00 4.24
4299 6066 1.836166 AGTGATCTATGTGCCAGCTGT 59.164 47.619 13.81 0.00 0.00 4.40
4300 6067 2.238144 AGTGATCTATGTGCCAGCTGTT 59.762 45.455 13.81 0.00 0.00 3.16
4301 6068 3.012518 GTGATCTATGTGCCAGCTGTTT 58.987 45.455 13.81 0.00 0.00 2.83
4302 6069 4.080919 AGTGATCTATGTGCCAGCTGTTTA 60.081 41.667 13.81 0.00 0.00 2.01
4303 6070 4.818546 GTGATCTATGTGCCAGCTGTTTAT 59.181 41.667 13.81 4.25 0.00 1.40
4304 6071 4.818005 TGATCTATGTGCCAGCTGTTTATG 59.182 41.667 13.81 0.00 0.00 1.90
4305 6072 3.544684 TCTATGTGCCAGCTGTTTATGG 58.455 45.455 13.81 0.00 39.73 2.74
4306 6073 1.477553 ATGTGCCAGCTGTTTATGGG 58.522 50.000 13.81 0.00 37.05 4.00
4307 6074 0.112218 TGTGCCAGCTGTTTATGGGT 59.888 50.000 13.81 0.00 37.05 4.51
4308 6075 0.527565 GTGCCAGCTGTTTATGGGTG 59.472 55.000 13.81 0.00 37.05 4.61
4309 6076 0.112218 TGCCAGCTGTTTATGGGTGT 59.888 50.000 13.81 0.00 37.05 4.16
4310 6077 1.352687 TGCCAGCTGTTTATGGGTGTA 59.647 47.619 13.81 0.00 37.05 2.90
4311 6078 2.017049 GCCAGCTGTTTATGGGTGTAG 58.983 52.381 13.81 0.00 37.05 2.74
4312 6079 2.017049 CCAGCTGTTTATGGGTGTAGC 58.983 52.381 13.81 0.00 32.63 3.58
4313 6080 2.356125 CCAGCTGTTTATGGGTGTAGCT 60.356 50.000 13.81 0.00 41.76 3.32
4314 6081 3.347216 CAGCTGTTTATGGGTGTAGCTT 58.653 45.455 5.25 0.00 39.29 3.74
4315 6082 3.127548 CAGCTGTTTATGGGTGTAGCTTG 59.872 47.826 5.25 0.00 39.29 4.01
4316 6083 3.081804 GCTGTTTATGGGTGTAGCTTGT 58.918 45.455 0.00 0.00 0.00 3.16
4317 6084 3.506067 GCTGTTTATGGGTGTAGCTTGTT 59.494 43.478 0.00 0.00 0.00 2.83
4318 6085 4.615912 GCTGTTTATGGGTGTAGCTTGTTG 60.616 45.833 0.00 0.00 0.00 3.33
4319 6086 4.720046 TGTTTATGGGTGTAGCTTGTTGA 58.280 39.130 0.00 0.00 0.00 3.18
4320 6087 4.759693 TGTTTATGGGTGTAGCTTGTTGAG 59.240 41.667 0.00 0.00 0.00 3.02
4321 6088 4.901197 TTATGGGTGTAGCTTGTTGAGA 57.099 40.909 0.00 0.00 0.00 3.27
4322 6089 2.839486 TGGGTGTAGCTTGTTGAGAG 57.161 50.000 0.00 0.00 0.00 3.20
4323 6090 2.047061 TGGGTGTAGCTTGTTGAGAGT 58.953 47.619 0.00 0.00 0.00 3.24
4324 6091 2.438021 TGGGTGTAGCTTGTTGAGAGTT 59.562 45.455 0.00 0.00 0.00 3.01
4325 6092 3.118038 TGGGTGTAGCTTGTTGAGAGTTT 60.118 43.478 0.00 0.00 0.00 2.66
4326 6093 4.101898 TGGGTGTAGCTTGTTGAGAGTTTA 59.898 41.667 0.00 0.00 0.00 2.01
4327 6094 5.221843 TGGGTGTAGCTTGTTGAGAGTTTAT 60.222 40.000 0.00 0.00 0.00 1.40
4328 6095 6.014070 TGGGTGTAGCTTGTTGAGAGTTTATA 60.014 38.462 0.00 0.00 0.00 0.98
4329 6096 6.535508 GGGTGTAGCTTGTTGAGAGTTTATAG 59.464 42.308 0.00 0.00 0.00 1.31
4330 6097 7.321153 GGTGTAGCTTGTTGAGAGTTTATAGA 58.679 38.462 0.00 0.00 0.00 1.98
4331 6098 7.489757 GGTGTAGCTTGTTGAGAGTTTATAGAG 59.510 40.741 0.00 0.00 0.00 2.43
4332 6099 8.244802 GTGTAGCTTGTTGAGAGTTTATAGAGA 58.755 37.037 0.00 0.00 0.00 3.10
4333 6100 8.972127 TGTAGCTTGTTGAGAGTTTATAGAGAT 58.028 33.333 0.00 0.00 0.00 2.75
4334 6101 9.810545 GTAGCTTGTTGAGAGTTTATAGAGATT 57.189 33.333 0.00 0.00 0.00 2.40
4336 6103 9.160496 AGCTTGTTGAGAGTTTATAGAGATTTG 57.840 33.333 0.00 0.00 0.00 2.32
4337 6104 7.907563 GCTTGTTGAGAGTTTATAGAGATTTGC 59.092 37.037 0.00 0.00 0.00 3.68
4338 6105 8.846943 TTGTTGAGAGTTTATAGAGATTTGCA 57.153 30.769 0.00 0.00 0.00 4.08
4339 6106 9.453572 TTGTTGAGAGTTTATAGAGATTTGCAT 57.546 29.630 0.00 0.00 0.00 3.96
4340 6107 8.886719 TGTTGAGAGTTTATAGAGATTTGCATG 58.113 33.333 0.00 0.00 0.00 4.06
4341 6108 7.488187 TGAGAGTTTATAGAGATTTGCATGC 57.512 36.000 11.82 11.82 0.00 4.06
4342 6109 6.201615 TGAGAGTTTATAGAGATTTGCATGCG 59.798 38.462 14.09 0.00 0.00 4.73
4343 6110 6.051717 AGAGTTTATAGAGATTTGCATGCGT 58.948 36.000 14.09 0.88 0.00 5.24
4344 6111 7.210174 AGAGTTTATAGAGATTTGCATGCGTA 58.790 34.615 14.09 3.31 0.00 4.42
4345 6112 7.383572 AGAGTTTATAGAGATTTGCATGCGTAG 59.616 37.037 14.09 0.00 0.00 3.51
4346 6113 6.986817 AGTTTATAGAGATTTGCATGCGTAGT 59.013 34.615 14.09 0.00 0.00 2.73
4347 6114 7.495934 AGTTTATAGAGATTTGCATGCGTAGTT 59.504 33.333 14.09 0.00 0.00 2.24
4377 6144 2.107950 TGCTTTGGGAGTAATCCACG 57.892 50.000 12.01 0.00 33.43 4.94
4417 6184 2.387185 GGTTTAAGGAAAAACCGTGCG 58.613 47.619 2.97 0.00 46.51 5.34
4420 6187 2.759538 TAAGGAAAAACCGTGCGTTG 57.240 45.000 0.00 0.00 44.74 4.10
4424 6191 1.002251 GGAAAAACCGTGCGTTGATCA 60.002 47.619 0.00 0.00 33.93 2.92
4433 6200 2.609350 GTGCGTTGATCATTTTGGCAT 58.391 42.857 0.00 0.00 0.00 4.40
4445 6212 0.676466 TTTGGCATGTGCTAGTCGGG 60.676 55.000 4.84 0.00 41.70 5.14
4448 6215 1.450312 GCATGTGCTAGTCGGGCTT 60.450 57.895 0.00 0.00 38.21 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
168 1406 2.285977 GTCGTCTTTGTTGTTGGTCCT 58.714 47.619 0.00 0.00 0.00 3.85
185 1423 1.581934 TCTGTTTGTTGCTCAGGTCG 58.418 50.000 0.00 0.00 0.00 4.79
190 1428 3.141398 GAGGTGATCTGTTTGTTGCTCA 58.859 45.455 0.00 0.00 0.00 4.26
222 1460 1.151777 CGTGCTGTCCGTTTGTGAGT 61.152 55.000 0.00 0.00 0.00 3.41
333 1591 3.880846 GGCGGGCGAGATTTGCTG 61.881 66.667 0.00 0.00 0.00 4.41
573 1844 2.767424 TACCCCGAATCCACCCACCA 62.767 60.000 0.00 0.00 0.00 4.17
1131 2432 3.334054 GCACCTTGGAGGAGGGCT 61.334 66.667 0.07 0.00 41.31 5.19
1303 2627 1.817099 CTGCGCTCAATCAGGTCCC 60.817 63.158 9.73 0.00 0.00 4.46
1501 2989 2.037772 ACCCAGCTAGACAAGTGAAGTG 59.962 50.000 0.00 0.00 0.00 3.16
1606 3126 2.091885 ACACAGAACCACACCCAATTCT 60.092 45.455 0.00 0.00 31.53 2.40
1677 3218 8.112822 TCCTAGGATCACAAATCCATACAAAAA 58.887 33.333 7.62 0.00 40.61 1.94
1705 3246 4.329545 GAGGCGGGACAGGCAACA 62.330 66.667 0.00 0.00 39.37 3.33
1720 3261 5.408299 CGGAGACAGAGAGATATACACAGAG 59.592 48.000 0.00 0.00 0.00 3.35
1732 3274 5.476599 AGATGAATAATCCGGAGACAGAGAG 59.523 44.000 11.34 0.00 35.72 3.20
1765 3307 9.661187 GAACTTTGAGCAATTCATCATGTATAG 57.339 33.333 0.00 0.00 35.27 1.31
1798 3340 0.771127 CCCCAGAGAAAAGGTGGTCA 59.229 55.000 0.00 0.00 0.00 4.02
1916 3524 5.332106 AGGAGCTTCATCAGTAGGATCTA 57.668 43.478 0.00 0.00 32.57 1.98
1990 3598 7.826252 CAGATTTTCTTAACCATCTCCTTCTGA 59.174 37.037 0.00 0.00 0.00 3.27
2202 3810 2.681097 GCAAGGTACTAGAAAGGGCAGG 60.681 54.545 0.00 0.00 38.49 4.85
2472 4080 3.729966 GGCATACCTTAGTTGCTCTACC 58.270 50.000 0.00 0.00 36.62 3.18
2519 4127 6.832520 AAGATGATGCATACTAGAGACGAT 57.167 37.500 0.00 0.00 0.00 3.73
2800 4410 9.683069 CTGTTCTTTACTTTAGCATGACAATTT 57.317 29.630 0.00 0.00 0.00 1.82
2818 4428 9.750125 GTTTTGGTTTATTCATCTCTGTTCTTT 57.250 29.630 0.00 0.00 0.00 2.52
2819 4429 8.360390 GGTTTTGGTTTATTCATCTCTGTTCTT 58.640 33.333 0.00 0.00 0.00 2.52
2820 4430 7.505585 TGGTTTTGGTTTATTCATCTCTGTTCT 59.494 33.333 0.00 0.00 0.00 3.01
2821 4431 7.657336 TGGTTTTGGTTTATTCATCTCTGTTC 58.343 34.615 0.00 0.00 0.00 3.18
2822 4432 7.595819 TGGTTTTGGTTTATTCATCTCTGTT 57.404 32.000 0.00 0.00 0.00 3.16
2823 4433 7.595819 TTGGTTTTGGTTTATTCATCTCTGT 57.404 32.000 0.00 0.00 0.00 3.41
2824 4434 8.885494 TTTTGGTTTTGGTTTATTCATCTCTG 57.115 30.769 0.00 0.00 0.00 3.35
2825 4435 8.704668 ACTTTTGGTTTTGGTTTATTCATCTCT 58.295 29.630 0.00 0.00 0.00 3.10
2826 4436 8.887036 ACTTTTGGTTTTGGTTTATTCATCTC 57.113 30.769 0.00 0.00 0.00 2.75
3324 4979 1.527844 GATGATCTGGGCCAGGTGC 60.528 63.158 32.23 21.11 40.16 5.01
3566 5222 2.250939 TGTCAAGCAAGAACGCCCG 61.251 57.895 0.00 0.00 0.00 6.13
3570 5226 1.569493 CCGGTGTCAAGCAAGAACG 59.431 57.895 0.00 0.00 0.00 3.95
3637 5300 1.219522 GGGGCACGCGTACATGATAC 61.220 60.000 13.44 0.00 0.00 2.24
3708 5371 3.961480 TCACACCACCACAGAAGATAG 57.039 47.619 0.00 0.00 0.00 2.08
3738 5401 7.680442 TGAAGCTATGCATACAAAGTACAAA 57.320 32.000 1.16 0.00 0.00 2.83
3739 5402 7.390440 AGTTGAAGCTATGCATACAAAGTACAA 59.610 33.333 1.16 1.41 0.00 2.41
3740 5403 6.878923 AGTTGAAGCTATGCATACAAAGTACA 59.121 34.615 1.16 0.00 0.00 2.90
3741 5404 7.308782 AGTTGAAGCTATGCATACAAAGTAC 57.691 36.000 1.16 0.00 0.00 2.73
3742 5405 9.261180 GATAGTTGAAGCTATGCATACAAAGTA 57.739 33.333 1.16 2.32 32.32 2.24
3743 5406 7.770433 TGATAGTTGAAGCTATGCATACAAAGT 59.230 33.333 1.16 0.27 32.32 2.66
3744 5407 8.066595 GTGATAGTTGAAGCTATGCATACAAAG 58.933 37.037 1.16 0.00 32.32 2.77
3837 5604 9.543783 GAGTAAATGAAAACGGAAGAGGTATAT 57.456 33.333 0.00 0.00 0.00 0.86
3867 5634 9.445878 AAGTTTGACTTAGGGTAAAGCTAATAC 57.554 33.333 0.00 0.00 36.52 1.89
3903 5670 2.301583 GCTTACCCTCAAAATTTGGCCA 59.698 45.455 0.00 0.00 0.00 5.36
3904 5671 2.567169 AGCTTACCCTCAAAATTTGGCC 59.433 45.455 5.83 0.00 0.00 5.36
3905 5672 3.961480 AGCTTACCCTCAAAATTTGGC 57.039 42.857 5.83 0.00 0.00 4.52
3906 5673 7.110155 TCTAGTAGCTTACCCTCAAAATTTGG 58.890 38.462 5.83 0.00 0.00 3.28
3907 5674 8.561738 TTCTAGTAGCTTACCCTCAAAATTTG 57.438 34.615 0.00 0.00 0.00 2.32
3908 5675 9.755122 ATTTCTAGTAGCTTACCCTCAAAATTT 57.245 29.630 0.00 0.00 0.00 1.82
3909 5676 9.178758 CATTTCTAGTAGCTTACCCTCAAAATT 57.821 33.333 0.00 0.00 0.00 1.82
3910 5677 7.283354 GCATTTCTAGTAGCTTACCCTCAAAAT 59.717 37.037 0.00 0.00 0.00 1.82
3911 5678 6.598064 GCATTTCTAGTAGCTTACCCTCAAAA 59.402 38.462 0.00 0.00 0.00 2.44
3912 5679 6.113411 GCATTTCTAGTAGCTTACCCTCAAA 58.887 40.000 0.00 0.00 0.00 2.69
3913 5680 5.188948 TGCATTTCTAGTAGCTTACCCTCAA 59.811 40.000 0.00 0.00 0.00 3.02
3914 5681 4.714802 TGCATTTCTAGTAGCTTACCCTCA 59.285 41.667 0.00 0.00 0.00 3.86
3915 5682 5.051153 GTGCATTTCTAGTAGCTTACCCTC 58.949 45.833 0.00 0.00 0.00 4.30
3916 5683 4.717280 AGTGCATTTCTAGTAGCTTACCCT 59.283 41.667 0.00 0.00 0.00 4.34
3917 5684 5.024785 AGTGCATTTCTAGTAGCTTACCC 57.975 43.478 0.00 0.00 0.00 3.69
3918 5685 5.051153 GGAGTGCATTTCTAGTAGCTTACC 58.949 45.833 0.00 0.00 0.00 2.85
3919 5686 5.908341 AGGAGTGCATTTCTAGTAGCTTAC 58.092 41.667 0.00 0.00 0.00 2.34
3920 5687 6.546428 AAGGAGTGCATTTCTAGTAGCTTA 57.454 37.500 0.00 0.00 0.00 3.09
3921 5688 5.428184 AAGGAGTGCATTTCTAGTAGCTT 57.572 39.130 0.00 0.00 0.00 3.74
3922 5689 6.155393 AGTTAAGGAGTGCATTTCTAGTAGCT 59.845 38.462 0.00 0.00 0.00 3.32
3923 5690 6.342111 AGTTAAGGAGTGCATTTCTAGTAGC 58.658 40.000 0.00 0.00 0.00 3.58
3926 5693 9.819267 GTATTAGTTAAGGAGTGCATTTCTAGT 57.181 33.333 0.00 0.00 0.00 2.57
3929 5696 8.763601 AGAGTATTAGTTAAGGAGTGCATTTCT 58.236 33.333 0.00 0.00 0.00 2.52
3930 5697 8.821894 CAGAGTATTAGTTAAGGAGTGCATTTC 58.178 37.037 0.00 0.00 0.00 2.17
3931 5698 8.540388 TCAGAGTATTAGTTAAGGAGTGCATTT 58.460 33.333 0.00 0.00 0.00 2.32
3932 5699 8.079211 TCAGAGTATTAGTTAAGGAGTGCATT 57.921 34.615 0.00 0.00 0.00 3.56
3933 5700 7.661536 TCAGAGTATTAGTTAAGGAGTGCAT 57.338 36.000 0.00 0.00 0.00 3.96
3934 5701 7.178628 AGTTCAGAGTATTAGTTAAGGAGTGCA 59.821 37.037 0.00 0.00 0.00 4.57
3935 5702 7.489757 CAGTTCAGAGTATTAGTTAAGGAGTGC 59.510 40.741 0.00 0.00 0.00 4.40
3936 5703 8.740906 TCAGTTCAGAGTATTAGTTAAGGAGTG 58.259 37.037 0.00 0.00 0.00 3.51
3937 5704 8.880991 TCAGTTCAGAGTATTAGTTAAGGAGT 57.119 34.615 0.00 0.00 0.00 3.85
3938 5705 8.410141 CCTCAGTTCAGAGTATTAGTTAAGGAG 58.590 40.741 0.00 0.00 33.75 3.69
3939 5706 7.894364 ACCTCAGTTCAGAGTATTAGTTAAGGA 59.106 37.037 0.00 0.00 33.75 3.36
3940 5707 7.976734 CACCTCAGTTCAGAGTATTAGTTAAGG 59.023 40.741 0.00 0.00 33.75 2.69
3941 5708 7.976734 CCACCTCAGTTCAGAGTATTAGTTAAG 59.023 40.741 0.00 0.00 33.75 1.85
3942 5709 7.453752 ACCACCTCAGTTCAGAGTATTAGTTAA 59.546 37.037 0.00 0.00 33.75 2.01
3943 5710 6.952358 ACCACCTCAGTTCAGAGTATTAGTTA 59.048 38.462 0.00 0.00 33.75 2.24
3944 5711 5.780793 ACCACCTCAGTTCAGAGTATTAGTT 59.219 40.000 0.00 0.00 33.75 2.24
3945 5712 5.334421 ACCACCTCAGTTCAGAGTATTAGT 58.666 41.667 0.00 0.00 33.75 2.24
3946 5713 5.923733 ACCACCTCAGTTCAGAGTATTAG 57.076 43.478 0.00 0.00 33.75 1.73
3947 5714 5.568825 GCAACCACCTCAGTTCAGAGTATTA 60.569 44.000 0.00 0.00 33.75 0.98
3948 5715 4.804261 GCAACCACCTCAGTTCAGAGTATT 60.804 45.833 0.00 0.00 33.75 1.89
3949 5716 3.307059 GCAACCACCTCAGTTCAGAGTAT 60.307 47.826 0.00 0.00 33.75 2.12
3950 5717 2.037251 GCAACCACCTCAGTTCAGAGTA 59.963 50.000 0.00 0.00 33.75 2.59
3951 5718 1.202698 GCAACCACCTCAGTTCAGAGT 60.203 52.381 0.00 0.00 33.75 3.24
3952 5719 1.517242 GCAACCACCTCAGTTCAGAG 58.483 55.000 0.00 0.00 35.39 3.35
3953 5720 0.108585 GGCAACCACCTCAGTTCAGA 59.891 55.000 0.00 0.00 0.00 3.27
3954 5721 0.109342 AGGCAACCACCTCAGTTCAG 59.891 55.000 0.00 0.00 33.62 3.02
3955 5722 2.230664 AGGCAACCACCTCAGTTCA 58.769 52.632 0.00 0.00 33.62 3.18
3962 5729 0.392998 CGCATTAGAGGCAACCACCT 60.393 55.000 0.00 0.00 45.04 4.00
3963 5730 0.676782 ACGCATTAGAGGCAACCACC 60.677 55.000 0.00 0.00 37.17 4.61
3964 5731 1.135689 CAACGCATTAGAGGCAACCAC 60.136 52.381 0.00 0.00 37.17 4.16
3965 5732 1.164411 CAACGCATTAGAGGCAACCA 58.836 50.000 0.00 0.00 37.17 3.67
3966 5733 1.448985 TCAACGCATTAGAGGCAACC 58.551 50.000 0.00 0.00 37.17 3.77
3967 5734 2.792542 GCATCAACGCATTAGAGGCAAC 60.793 50.000 0.00 0.00 38.77 4.17
3968 5735 1.401552 GCATCAACGCATTAGAGGCAA 59.598 47.619 0.00 0.00 38.77 4.52
3969 5736 1.016627 GCATCAACGCATTAGAGGCA 58.983 50.000 0.00 0.00 38.77 4.75
3970 5737 0.308993 GGCATCAACGCATTAGAGGC 59.691 55.000 0.00 0.00 38.25 4.70
3971 5738 0.947244 GGGCATCAACGCATTAGAGG 59.053 55.000 0.00 0.00 0.00 3.69
3972 5739 0.583438 CGGGCATCAACGCATTAGAG 59.417 55.000 0.00 0.00 0.00 2.43
3973 5740 0.107897 ACGGGCATCAACGCATTAGA 60.108 50.000 0.00 0.00 0.00 2.10
3974 5741 0.732571 AACGGGCATCAACGCATTAG 59.267 50.000 0.00 0.00 0.00 1.73
3975 5742 1.169577 AAACGGGCATCAACGCATTA 58.830 45.000 0.00 0.00 0.00 1.90
3976 5743 0.316841 AAAACGGGCATCAACGCATT 59.683 45.000 0.00 0.00 0.00 3.56
3977 5744 0.109319 GAAAACGGGCATCAACGCAT 60.109 50.000 0.00 0.00 0.00 4.73
3978 5745 1.284408 GAAAACGGGCATCAACGCA 59.716 52.632 0.00 0.00 0.00 5.24
3979 5746 0.729140 CTGAAAACGGGCATCAACGC 60.729 55.000 0.00 0.00 0.00 4.84
3980 5747 0.109781 CCTGAAAACGGGCATCAACG 60.110 55.000 0.00 0.00 0.00 4.10
3981 5748 0.243636 CCCTGAAAACGGGCATCAAC 59.756 55.000 0.00 0.00 34.32 3.18
3982 5749 2.652313 CCCTGAAAACGGGCATCAA 58.348 52.632 0.00 0.00 34.32 2.57
3983 5750 4.413928 CCCTGAAAACGGGCATCA 57.586 55.556 0.00 0.00 34.32 3.07
3988 5755 1.269723 GAAAAGAGCCCTGAAAACGGG 59.730 52.381 0.00 0.00 44.89 5.28
3989 5756 1.953686 TGAAAAGAGCCCTGAAAACGG 59.046 47.619 0.00 0.00 0.00 4.44
3990 5757 2.357637 TGTGAAAAGAGCCCTGAAAACG 59.642 45.455 0.00 0.00 0.00 3.60
3991 5758 4.385358 TTGTGAAAAGAGCCCTGAAAAC 57.615 40.909 0.00 0.00 0.00 2.43
3992 5759 5.413309 TTTTGTGAAAAGAGCCCTGAAAA 57.587 34.783 0.00 0.00 0.00 2.29
3993 5760 5.413309 TTTTTGTGAAAAGAGCCCTGAAA 57.587 34.783 0.00 0.00 31.41 2.69
4004 5771 7.924940 AGTTGCAAAGTTTCTTTTTGTGAAAA 58.075 26.923 0.00 0.00 37.73 2.29
4005 5772 7.489574 AGTTGCAAAGTTTCTTTTTGTGAAA 57.510 28.000 0.00 0.00 37.73 2.69
4006 5773 7.489574 AAGTTGCAAAGTTTCTTTTTGTGAA 57.510 28.000 0.00 0.00 35.56 3.18
4007 5774 7.489574 AAAGTTGCAAAGTTTCTTTTTGTGA 57.510 28.000 0.00 0.00 45.87 3.58
4008 5775 9.476761 GATAAAGTTGCAAAGTTTCTTTTTGTG 57.523 29.630 14.79 0.00 45.87 3.33
4009 5776 9.213799 TGATAAAGTTGCAAAGTTTCTTTTTGT 57.786 25.926 14.79 5.02 45.87 2.83
4010 5777 9.476761 GTGATAAAGTTGCAAAGTTTCTTTTTG 57.523 29.630 14.79 0.00 45.87 2.44
4011 5778 8.664798 GGTGATAAAGTTGCAAAGTTTCTTTTT 58.335 29.630 14.79 8.95 45.87 1.94
4012 5779 7.821846 TGGTGATAAAGTTGCAAAGTTTCTTTT 59.178 29.630 14.79 5.89 45.87 2.27
4013 5780 7.327214 TGGTGATAAAGTTGCAAAGTTTCTTT 58.673 30.769 14.22 14.22 45.87 2.52
4014 5781 6.872920 TGGTGATAAAGTTGCAAAGTTTCTT 58.127 32.000 0.00 0.00 45.87 2.52
4015 5782 6.463995 TGGTGATAAAGTTGCAAAGTTTCT 57.536 33.333 0.00 0.00 45.87 2.52
4016 5783 7.147976 AGATGGTGATAAAGTTGCAAAGTTTC 58.852 34.615 0.00 0.00 45.87 2.78
4018 5785 6.655078 AGATGGTGATAAAGTTGCAAAGTT 57.345 33.333 0.00 0.31 42.32 2.66
4019 5786 6.568462 CGAAGATGGTGATAAAGTTGCAAAGT 60.568 38.462 0.00 0.00 0.00 2.66
4020 5787 5.796935 CGAAGATGGTGATAAAGTTGCAAAG 59.203 40.000 0.00 0.00 0.00 2.77
4021 5788 5.471797 TCGAAGATGGTGATAAAGTTGCAAA 59.528 36.000 0.00 0.00 0.00 3.68
4022 5789 5.000591 TCGAAGATGGTGATAAAGTTGCAA 58.999 37.500 0.00 0.00 0.00 4.08
4023 5790 4.574892 TCGAAGATGGTGATAAAGTTGCA 58.425 39.130 0.00 0.00 0.00 4.08
4024 5791 4.034510 CCTCGAAGATGGTGATAAAGTTGC 59.965 45.833 0.00 0.00 33.89 4.17
4025 5792 4.034510 GCCTCGAAGATGGTGATAAAGTTG 59.965 45.833 0.00 0.00 33.89 3.16
4026 5793 4.192317 GCCTCGAAGATGGTGATAAAGTT 58.808 43.478 0.00 0.00 33.89 2.66
4027 5794 3.432326 GGCCTCGAAGATGGTGATAAAGT 60.432 47.826 0.00 0.00 33.89 2.66
4028 5795 3.134458 GGCCTCGAAGATGGTGATAAAG 58.866 50.000 0.00 0.00 33.89 1.85
4029 5796 2.483013 CGGCCTCGAAGATGGTGATAAA 60.483 50.000 0.00 0.00 39.00 1.40
4030 5797 1.068588 CGGCCTCGAAGATGGTGATAA 59.931 52.381 0.00 0.00 39.00 1.75
4031 5798 0.673985 CGGCCTCGAAGATGGTGATA 59.326 55.000 0.00 0.00 39.00 2.15
4032 5799 1.443407 CGGCCTCGAAGATGGTGAT 59.557 57.895 0.00 0.00 39.00 3.06
4033 5800 2.892640 CGGCCTCGAAGATGGTGA 59.107 61.111 0.00 0.00 39.00 4.02
4034 5801 2.859273 AAGCGGCCTCGAAGATGGTG 62.859 60.000 0.00 0.00 39.00 4.17
4035 5802 2.660064 AAGCGGCCTCGAAGATGGT 61.660 57.895 0.00 0.00 39.00 3.55
4036 5803 2.176273 CAAGCGGCCTCGAAGATGG 61.176 63.158 0.00 0.00 39.00 3.51
4037 5804 2.817423 GCAAGCGGCCTCGAAGATG 61.817 63.158 0.00 0.00 39.00 2.90
4038 5805 2.512515 GCAAGCGGCCTCGAAGAT 60.513 61.111 0.00 0.00 39.00 2.40
4050 5817 4.261781 GCTAGCGCCATGGCAAGC 62.262 66.667 34.93 31.69 42.06 4.01
4051 5818 2.409055 TTGCTAGCGCCATGGCAAG 61.409 57.895 34.93 27.14 39.33 4.01
4052 5819 2.360978 TTGCTAGCGCCATGGCAA 60.361 55.556 34.93 18.46 41.47 4.52
4053 5820 2.825387 CTTGCTAGCGCCATGGCA 60.825 61.111 34.93 16.17 42.06 4.92
4054 5821 2.514592 TCTTGCTAGCGCCATGGC 60.515 61.111 27.67 27.67 34.43 4.40
4055 5822 2.528743 CGTCTTGCTAGCGCCATGG 61.529 63.158 7.63 7.63 34.43 3.66
4056 5823 0.877649 ATCGTCTTGCTAGCGCCATG 60.878 55.000 10.77 1.41 34.43 3.66
4057 5824 0.179073 AATCGTCTTGCTAGCGCCAT 60.179 50.000 10.77 0.00 34.43 4.40
4058 5825 1.083806 CAATCGTCTTGCTAGCGCCA 61.084 55.000 10.77 0.00 34.43 5.69
4059 5826 1.638467 CAATCGTCTTGCTAGCGCC 59.362 57.895 10.77 0.00 34.43 6.53
4060 5827 1.084370 ACCAATCGTCTTGCTAGCGC 61.084 55.000 10.77 0.00 0.00 5.92
4061 5828 1.324736 GAACCAATCGTCTTGCTAGCG 59.675 52.381 10.77 0.00 0.00 4.26
4062 5829 1.666189 GGAACCAATCGTCTTGCTAGC 59.334 52.381 8.10 8.10 0.00 3.42
4078 5845 2.640184 CCTTCTCGTTTATGGGGGAAC 58.360 52.381 0.00 0.00 0.00 3.62
4079 5846 1.064979 GCCTTCTCGTTTATGGGGGAA 60.065 52.381 0.00 0.00 0.00 3.97
4080 5847 0.544697 GCCTTCTCGTTTATGGGGGA 59.455 55.000 0.00 0.00 0.00 4.81
4081 5848 0.254747 TGCCTTCTCGTTTATGGGGG 59.745 55.000 0.00 0.00 0.00 5.40
4082 5849 2.122783 TTGCCTTCTCGTTTATGGGG 57.877 50.000 0.00 0.00 0.00 4.96
4083 5850 3.278574 TGATTGCCTTCTCGTTTATGGG 58.721 45.455 0.00 0.00 0.00 4.00
4084 5851 5.505173 AATGATTGCCTTCTCGTTTATGG 57.495 39.130 0.00 0.00 0.00 2.74
4085 5852 6.483307 TCCTAATGATTGCCTTCTCGTTTATG 59.517 38.462 0.00 0.00 0.00 1.90
4086 5853 6.591935 TCCTAATGATTGCCTTCTCGTTTAT 58.408 36.000 0.00 0.00 0.00 1.40
4087 5854 5.984725 TCCTAATGATTGCCTTCTCGTTTA 58.015 37.500 0.00 0.00 0.00 2.01
4088 5855 4.843728 TCCTAATGATTGCCTTCTCGTTT 58.156 39.130 0.00 0.00 0.00 3.60
4089 5856 4.487714 TCCTAATGATTGCCTTCTCGTT 57.512 40.909 0.00 0.00 0.00 3.85
4090 5857 4.487714 TTCCTAATGATTGCCTTCTCGT 57.512 40.909 0.00 0.00 0.00 4.18
4091 5858 5.755813 CATTTCCTAATGATTGCCTTCTCG 58.244 41.667 0.00 0.00 43.12 4.04
4092 5859 5.068198 TGCATTTCCTAATGATTGCCTTCTC 59.932 40.000 2.25 0.00 43.12 2.87
4093 5860 4.957954 TGCATTTCCTAATGATTGCCTTCT 59.042 37.500 2.25 0.00 43.12 2.85
4094 5861 5.266733 TGCATTTCCTAATGATTGCCTTC 57.733 39.130 2.25 0.00 43.12 3.46
4095 5862 5.422970 TCTTGCATTTCCTAATGATTGCCTT 59.577 36.000 2.25 0.00 43.12 4.35
4096 5863 4.957954 TCTTGCATTTCCTAATGATTGCCT 59.042 37.500 2.25 0.00 43.12 4.75
4097 5864 5.266733 TCTTGCATTTCCTAATGATTGCC 57.733 39.130 2.25 0.00 43.12 4.52
4098 5865 6.255020 CACTTCTTGCATTTCCTAATGATTGC 59.745 38.462 2.25 0.00 43.12 3.56
4099 5866 6.755141 CCACTTCTTGCATTTCCTAATGATTG 59.245 38.462 2.25 0.00 43.12 2.67
4100 5867 6.127253 CCCACTTCTTGCATTTCCTAATGATT 60.127 38.462 2.25 0.00 43.12 2.57
4101 5868 5.361857 CCCACTTCTTGCATTTCCTAATGAT 59.638 40.000 2.25 0.00 43.12 2.45
4102 5869 4.706476 CCCACTTCTTGCATTTCCTAATGA 59.294 41.667 2.25 0.00 43.12 2.57
4103 5870 4.463891 ACCCACTTCTTGCATTTCCTAATG 59.536 41.667 0.00 0.00 43.28 1.90
4104 5871 4.463891 CACCCACTTCTTGCATTTCCTAAT 59.536 41.667 0.00 0.00 0.00 1.73
4105 5872 3.826157 CACCCACTTCTTGCATTTCCTAA 59.174 43.478 0.00 0.00 0.00 2.69
4106 5873 3.420893 CACCCACTTCTTGCATTTCCTA 58.579 45.455 0.00 0.00 0.00 2.94
4107 5874 2.242043 CACCCACTTCTTGCATTTCCT 58.758 47.619 0.00 0.00 0.00 3.36
4108 5875 1.337167 GCACCCACTTCTTGCATTTCC 60.337 52.381 0.00 0.00 36.22 3.13
4109 5876 1.615392 AGCACCCACTTCTTGCATTTC 59.385 47.619 0.00 0.00 38.81 2.17
4110 5877 1.615392 GAGCACCCACTTCTTGCATTT 59.385 47.619 0.00 0.00 38.81 2.32
4111 5878 1.202976 AGAGCACCCACTTCTTGCATT 60.203 47.619 0.00 0.00 38.81 3.56
4112 5879 0.403271 AGAGCACCCACTTCTTGCAT 59.597 50.000 0.00 0.00 38.81 3.96
4113 5880 1.055849 TAGAGCACCCACTTCTTGCA 58.944 50.000 0.00 0.00 38.81 4.08
4114 5881 2.093235 AGATAGAGCACCCACTTCTTGC 60.093 50.000 0.00 0.00 36.45 4.01
4115 5882 3.902881 AGATAGAGCACCCACTTCTTG 57.097 47.619 0.00 0.00 0.00 3.02
4116 5883 4.287067 TCAAAGATAGAGCACCCACTTCTT 59.713 41.667 0.00 0.00 0.00 2.52
4117 5884 3.840666 TCAAAGATAGAGCACCCACTTCT 59.159 43.478 0.00 0.00 0.00 2.85
4118 5885 4.207891 TCAAAGATAGAGCACCCACTTC 57.792 45.455 0.00 0.00 0.00 3.01
4119 5886 4.384647 GGATCAAAGATAGAGCACCCACTT 60.385 45.833 0.00 0.00 0.00 3.16
4120 5887 3.135530 GGATCAAAGATAGAGCACCCACT 59.864 47.826 0.00 0.00 0.00 4.00
4121 5888 3.471680 GGATCAAAGATAGAGCACCCAC 58.528 50.000 0.00 0.00 0.00 4.61
4122 5889 2.103094 CGGATCAAAGATAGAGCACCCA 59.897 50.000 0.00 0.00 0.00 4.51
4123 5890 2.365617 TCGGATCAAAGATAGAGCACCC 59.634 50.000 0.00 0.00 0.00 4.61
4124 5891 3.181475 TGTCGGATCAAAGATAGAGCACC 60.181 47.826 0.00 0.00 0.00 5.01
4125 5892 4.046938 TGTCGGATCAAAGATAGAGCAC 57.953 45.455 0.00 0.00 0.00 4.40
4126 5893 4.586421 AGATGTCGGATCAAAGATAGAGCA 59.414 41.667 0.00 0.00 0.00 4.26
4127 5894 5.132897 AGATGTCGGATCAAAGATAGAGC 57.867 43.478 0.00 0.00 0.00 4.09
4128 5895 5.925397 CCAAGATGTCGGATCAAAGATAGAG 59.075 44.000 0.00 0.00 0.00 2.43
4129 5896 5.598417 TCCAAGATGTCGGATCAAAGATAGA 59.402 40.000 0.00 0.00 0.00 1.98
4130 5897 5.847304 TCCAAGATGTCGGATCAAAGATAG 58.153 41.667 0.00 0.00 0.00 2.08
4131 5898 5.221521 CCTCCAAGATGTCGGATCAAAGATA 60.222 44.000 0.00 0.00 0.00 1.98
4132 5899 4.444022 CCTCCAAGATGTCGGATCAAAGAT 60.444 45.833 0.00 0.00 0.00 2.40
4133 5900 3.118629 CCTCCAAGATGTCGGATCAAAGA 60.119 47.826 0.00 0.00 0.00 2.52
4134 5901 3.118629 TCCTCCAAGATGTCGGATCAAAG 60.119 47.826 0.00 0.00 0.00 2.77
4135 5902 2.837591 TCCTCCAAGATGTCGGATCAAA 59.162 45.455 0.00 0.00 0.00 2.69
4136 5903 2.432146 CTCCTCCAAGATGTCGGATCAA 59.568 50.000 0.00 0.00 0.00 2.57
4137 5904 2.034878 CTCCTCCAAGATGTCGGATCA 58.965 52.381 0.00 0.00 0.00 2.92
4138 5905 2.311463 TCTCCTCCAAGATGTCGGATC 58.689 52.381 0.00 0.00 0.00 3.36
4139 5906 2.461300 TCTCCTCCAAGATGTCGGAT 57.539 50.000 0.00 0.00 0.00 4.18
4140 5907 2.103373 CTTCTCCTCCAAGATGTCGGA 58.897 52.381 0.00 0.00 0.00 4.55
4141 5908 1.827969 ACTTCTCCTCCAAGATGTCGG 59.172 52.381 0.00 0.00 30.23 4.79
4142 5909 2.757868 AGACTTCTCCTCCAAGATGTCG 59.242 50.000 11.79 0.00 46.86 4.35
4143 5910 4.817318 AAGACTTCTCCTCCAAGATGTC 57.183 45.455 10.35 10.35 44.64 3.06
4144 5911 5.574970 AAAAGACTTCTCCTCCAAGATGT 57.425 39.130 0.00 0.00 36.63 3.06
4145 5912 6.070538 TCCTAAAAGACTTCTCCTCCAAGATG 60.071 42.308 0.00 0.00 0.00 2.90
4146 5913 6.026186 TCCTAAAAGACTTCTCCTCCAAGAT 58.974 40.000 0.00 0.00 0.00 2.40
4147 5914 5.403512 TCCTAAAAGACTTCTCCTCCAAGA 58.596 41.667 0.00 0.00 0.00 3.02
4148 5915 5.729510 CTCCTAAAAGACTTCTCCTCCAAG 58.270 45.833 0.00 0.00 0.00 3.61
4149 5916 4.020128 GCTCCTAAAAGACTTCTCCTCCAA 60.020 45.833 0.00 0.00 0.00 3.53
4150 5917 3.515901 GCTCCTAAAAGACTTCTCCTCCA 59.484 47.826 0.00 0.00 0.00 3.86
4151 5918 3.515901 TGCTCCTAAAAGACTTCTCCTCC 59.484 47.826 0.00 0.00 0.00 4.30
4152 5919 4.810191 TGCTCCTAAAAGACTTCTCCTC 57.190 45.455 0.00 0.00 0.00 3.71
4153 5920 5.568620 TTTGCTCCTAAAAGACTTCTCCT 57.431 39.130 0.00 0.00 0.00 3.69
4154 5921 5.335269 GCTTTTGCTCCTAAAAGACTTCTCC 60.335 44.000 13.42 0.00 45.86 3.71
4155 5922 5.239525 TGCTTTTGCTCCTAAAAGACTTCTC 59.760 40.000 13.42 0.00 45.86 2.87
4156 5923 5.133221 TGCTTTTGCTCCTAAAAGACTTCT 58.867 37.500 13.42 0.00 45.86 2.85
4157 5924 5.438761 TGCTTTTGCTCCTAAAAGACTTC 57.561 39.130 13.42 0.00 45.86 3.01
4158 5925 5.594317 TCTTGCTTTTGCTCCTAAAAGACTT 59.406 36.000 13.42 0.00 45.86 3.01
4159 5926 5.133221 TCTTGCTTTTGCTCCTAAAAGACT 58.867 37.500 13.42 0.00 45.86 3.24
4160 5927 5.438761 TCTTGCTTTTGCTCCTAAAAGAC 57.561 39.130 13.42 6.76 45.86 3.01
4161 5928 5.827797 TCTTCTTGCTTTTGCTCCTAAAAGA 59.172 36.000 13.42 0.00 45.86 2.52
4162 5929 6.076981 TCTTCTTGCTTTTGCTCCTAAAAG 57.923 37.500 6.62 6.62 45.78 2.27
4172 5939 3.005050 TCATGCCACTCTTCTTGCTTTTG 59.995 43.478 0.00 0.00 0.00 2.44
4173 5940 3.225104 TCATGCCACTCTTCTTGCTTTT 58.775 40.909 0.00 0.00 0.00 2.27
4174 5941 2.867624 TCATGCCACTCTTCTTGCTTT 58.132 42.857 0.00 0.00 0.00 3.51
4175 5942 2.574006 TCATGCCACTCTTCTTGCTT 57.426 45.000 0.00 0.00 0.00 3.91
4176 5943 2.803030 ATCATGCCACTCTTCTTGCT 57.197 45.000 0.00 0.00 0.00 3.91
4177 5944 2.877168 CCTATCATGCCACTCTTCTTGC 59.123 50.000 0.00 0.00 0.00 4.01
4178 5945 4.412796 TCCTATCATGCCACTCTTCTTG 57.587 45.455 0.00 0.00 0.00 3.02
4179 5946 4.141528 CCTTCCTATCATGCCACTCTTCTT 60.142 45.833 0.00 0.00 0.00 2.52
4180 5947 3.390639 CCTTCCTATCATGCCACTCTTCT 59.609 47.826 0.00 0.00 0.00 2.85
4181 5948 3.737850 CCTTCCTATCATGCCACTCTTC 58.262 50.000 0.00 0.00 0.00 2.87
4182 5949 2.158696 GCCTTCCTATCATGCCACTCTT 60.159 50.000 0.00 0.00 0.00 2.85
4183 5950 1.419387 GCCTTCCTATCATGCCACTCT 59.581 52.381 0.00 0.00 0.00 3.24
4184 5951 1.141657 TGCCTTCCTATCATGCCACTC 59.858 52.381 0.00 0.00 0.00 3.51
4185 5952 1.216064 TGCCTTCCTATCATGCCACT 58.784 50.000 0.00 0.00 0.00 4.00
4186 5953 2.283145 ATGCCTTCCTATCATGCCAC 57.717 50.000 0.00 0.00 0.00 5.01
4187 5954 3.874977 GCATATGCCTTCCTATCATGCCA 60.875 47.826 17.26 0.00 33.00 4.92
4188 5955 2.686915 GCATATGCCTTCCTATCATGCC 59.313 50.000 17.26 0.00 33.00 4.40
4189 5956 3.349927 TGCATATGCCTTCCTATCATGC 58.650 45.455 24.54 0.00 41.18 4.06
4190 5957 3.377485 GCTGCATATGCCTTCCTATCATG 59.623 47.826 24.54 0.00 41.18 3.07
4191 5958 3.266254 AGCTGCATATGCCTTCCTATCAT 59.734 43.478 24.54 0.00 41.18 2.45
4192 5959 2.641321 AGCTGCATATGCCTTCCTATCA 59.359 45.455 24.54 1.84 41.18 2.15
4193 5960 3.008330 CAGCTGCATATGCCTTCCTATC 58.992 50.000 24.54 0.82 41.18 2.08
4194 5961 2.878935 GCAGCTGCATATGCCTTCCTAT 60.879 50.000 33.36 1.37 41.18 2.57
4195 5962 1.544093 GCAGCTGCATATGCCTTCCTA 60.544 52.381 33.36 4.10 41.18 2.94
4196 5963 0.822532 GCAGCTGCATATGCCTTCCT 60.823 55.000 33.36 12.08 41.18 3.36
4197 5964 0.822532 AGCAGCTGCATATGCCTTCC 60.823 55.000 38.24 10.07 43.60 3.46
4198 5965 1.030457 AAGCAGCTGCATATGCCTTC 58.970 50.000 38.24 13.10 43.60 3.46
4199 5966 1.136305 CAAAGCAGCTGCATATGCCTT 59.864 47.619 38.24 20.26 43.60 4.35
4200 5967 0.744874 CAAAGCAGCTGCATATGCCT 59.255 50.000 38.24 15.14 43.60 4.75
4201 5968 0.742505 TCAAAGCAGCTGCATATGCC 59.257 50.000 38.24 10.41 43.60 4.40
4202 5969 1.836383 GTCAAAGCAGCTGCATATGC 58.164 50.000 38.24 21.09 45.16 3.14
4203 5970 1.268386 CCGTCAAAGCAGCTGCATATG 60.268 52.381 38.24 30.26 45.16 1.78
4204 5971 1.019673 CCGTCAAAGCAGCTGCATAT 58.980 50.000 38.24 22.12 45.16 1.78
4205 5972 0.036483 TCCGTCAAAGCAGCTGCATA 60.036 50.000 38.24 18.59 45.16 3.14
4206 5973 0.679002 ATCCGTCAAAGCAGCTGCAT 60.679 50.000 38.24 26.56 45.16 3.96
4207 5974 1.302752 ATCCGTCAAAGCAGCTGCA 60.303 52.632 38.24 17.15 45.16 4.41
4208 5975 1.136147 CATCCGTCAAAGCAGCTGC 59.864 57.895 31.53 31.53 42.49 5.25
4209 5976 1.136147 GCATCCGTCAAAGCAGCTG 59.864 57.895 10.11 10.11 0.00 4.24
4210 5977 1.302752 TGCATCCGTCAAAGCAGCT 60.303 52.632 0.00 0.00 32.48 4.24
4211 5978 1.154150 GTGCATCCGTCAAAGCAGC 60.154 57.895 0.00 0.00 37.72 5.25
4212 5979 1.133253 CGTGCATCCGTCAAAGCAG 59.867 57.895 0.00 0.00 37.72 4.24
4213 5980 1.596752 ACGTGCATCCGTCAAAGCA 60.597 52.632 0.00 0.00 35.95 3.91
4214 5981 3.253955 ACGTGCATCCGTCAAAGC 58.746 55.556 0.00 0.00 35.95 3.51
4220 5987 1.078709 CTGAAATGACGTGCATCCGT 58.921 50.000 1.53 1.53 45.18 4.69
4221 5988 1.325640 CTCTGAAATGACGTGCATCCG 59.674 52.381 0.00 0.00 35.78 4.18
4222 5989 2.350522 ACTCTGAAATGACGTGCATCC 58.649 47.619 0.00 0.00 35.78 3.51
4223 5990 3.187227 ACAACTCTGAAATGACGTGCATC 59.813 43.478 0.00 0.00 35.78 3.91
4224 5991 3.141398 ACAACTCTGAAATGACGTGCAT 58.859 40.909 0.00 0.00 39.43 3.96
4225 5992 2.543848 GACAACTCTGAAATGACGTGCA 59.456 45.455 0.00 0.00 0.00 4.57
4226 5993 2.543848 TGACAACTCTGAAATGACGTGC 59.456 45.455 0.00 0.00 0.00 5.34
4227 5994 4.997905 ATGACAACTCTGAAATGACGTG 57.002 40.909 0.00 0.00 0.00 4.49
4228 5995 4.816385 ACAATGACAACTCTGAAATGACGT 59.184 37.500 0.00 0.00 0.00 4.34
4229 5996 5.142265 CACAATGACAACTCTGAAATGACG 58.858 41.667 0.00 0.00 0.00 4.35
4230 5997 6.064846 ACACAATGACAACTCTGAAATGAC 57.935 37.500 0.00 0.00 0.00 3.06
4231 5998 6.698008 AACACAATGACAACTCTGAAATGA 57.302 33.333 0.00 0.00 0.00 2.57
4232 5999 7.760131 AAAACACAATGACAACTCTGAAATG 57.240 32.000 0.00 0.00 0.00 2.32
4233 6000 7.818930 ACAAAAACACAATGACAACTCTGAAAT 59.181 29.630 0.00 0.00 0.00 2.17
4234 6001 7.151308 ACAAAAACACAATGACAACTCTGAAA 58.849 30.769 0.00 0.00 0.00 2.69
4235 6002 6.686630 ACAAAAACACAATGACAACTCTGAA 58.313 32.000 0.00 0.00 0.00 3.02
4236 6003 6.266168 ACAAAAACACAATGACAACTCTGA 57.734 33.333 0.00 0.00 0.00 3.27
4237 6004 6.183360 CCAACAAAAACACAATGACAACTCTG 60.183 38.462 0.00 0.00 0.00 3.35
4238 6005 5.868801 CCAACAAAAACACAATGACAACTCT 59.131 36.000 0.00 0.00 0.00 3.24
4239 6006 5.063312 CCCAACAAAAACACAATGACAACTC 59.937 40.000 0.00 0.00 0.00 3.01
4240 6007 4.934602 CCCAACAAAAACACAATGACAACT 59.065 37.500 0.00 0.00 0.00 3.16
4241 6008 4.693095 ACCCAACAAAAACACAATGACAAC 59.307 37.500 0.00 0.00 0.00 3.32
4242 6009 4.899502 ACCCAACAAAAACACAATGACAA 58.100 34.783 0.00 0.00 0.00 3.18
4243 6010 4.543590 ACCCAACAAAAACACAATGACA 57.456 36.364 0.00 0.00 0.00 3.58
4244 6011 4.806775 GGTACCCAACAAAAACACAATGAC 59.193 41.667 0.00 0.00 0.00 3.06
4245 6012 4.712337 AGGTACCCAACAAAAACACAATGA 59.288 37.500 8.74 0.00 0.00 2.57
4246 6013 5.017294 AGGTACCCAACAAAAACACAATG 57.983 39.130 8.74 0.00 0.00 2.82
4247 6014 5.685520 AAGGTACCCAACAAAAACACAAT 57.314 34.783 8.74 0.00 0.00 2.71
4248 6015 5.221661 ACAAAGGTACCCAACAAAAACACAA 60.222 36.000 8.74 0.00 0.00 3.33
4249 6016 4.283722 ACAAAGGTACCCAACAAAAACACA 59.716 37.500 8.74 0.00 0.00 3.72
4250 6017 4.627900 CACAAAGGTACCCAACAAAAACAC 59.372 41.667 8.74 0.00 0.00 3.32
4251 6018 4.527038 TCACAAAGGTACCCAACAAAAACA 59.473 37.500 8.74 0.00 0.00 2.83
4252 6019 5.074584 TCACAAAGGTACCCAACAAAAAC 57.925 39.130 8.74 0.00 0.00 2.43
4253 6020 4.160626 CCTCACAAAGGTACCCAACAAAAA 59.839 41.667 8.74 0.00 40.67 1.94
4254 6021 3.702045 CCTCACAAAGGTACCCAACAAAA 59.298 43.478 8.74 0.00 40.67 2.44
4255 6022 3.292460 CCTCACAAAGGTACCCAACAAA 58.708 45.455 8.74 0.00 40.67 2.83
4256 6023 2.938838 CCTCACAAAGGTACCCAACAA 58.061 47.619 8.74 0.00 40.67 2.83
4257 6024 2.649531 CCTCACAAAGGTACCCAACA 57.350 50.000 8.74 0.00 40.67 3.33
4267 6034 5.579904 CACATAGATCACTGACCTCACAAAG 59.420 44.000 0.00 0.00 0.00 2.77
4268 6035 5.482006 CACATAGATCACTGACCTCACAAA 58.518 41.667 0.00 0.00 0.00 2.83
4269 6036 4.621510 GCACATAGATCACTGACCTCACAA 60.622 45.833 0.00 0.00 0.00 3.33
4270 6037 3.118992 GCACATAGATCACTGACCTCACA 60.119 47.826 0.00 0.00 0.00 3.58
4271 6038 3.452474 GCACATAGATCACTGACCTCAC 58.548 50.000 0.00 0.00 0.00 3.51
4272 6039 2.432146 GGCACATAGATCACTGACCTCA 59.568 50.000 0.00 0.00 0.00 3.86
4273 6040 2.432146 TGGCACATAGATCACTGACCTC 59.568 50.000 0.00 0.00 0.00 3.85
4274 6041 2.433604 CTGGCACATAGATCACTGACCT 59.566 50.000 0.00 0.00 38.20 3.85
4275 6042 2.831333 CTGGCACATAGATCACTGACC 58.169 52.381 0.00 0.65 38.20 4.02
4276 6043 2.158986 AGCTGGCACATAGATCACTGAC 60.159 50.000 0.00 0.00 38.20 3.51
4277 6044 2.113807 AGCTGGCACATAGATCACTGA 58.886 47.619 0.00 0.00 38.20 3.41
4278 6045 2.210961 CAGCTGGCACATAGATCACTG 58.789 52.381 5.57 0.00 38.20 3.66
4279 6046 1.836166 ACAGCTGGCACATAGATCACT 59.164 47.619 19.93 0.00 38.20 3.41
4280 6047 2.322355 ACAGCTGGCACATAGATCAC 57.678 50.000 19.93 0.00 38.20 3.06
4281 6048 3.354948 AAACAGCTGGCACATAGATCA 57.645 42.857 19.93 0.00 38.20 2.92
4282 6049 4.214971 CCATAAACAGCTGGCACATAGATC 59.785 45.833 19.93 0.00 38.20 2.75
4283 6050 4.139786 CCATAAACAGCTGGCACATAGAT 58.860 43.478 19.93 0.00 38.20 1.98
4284 6051 3.544684 CCATAAACAGCTGGCACATAGA 58.455 45.455 19.93 0.00 38.20 1.98
4285 6052 2.620115 CCCATAAACAGCTGGCACATAG 59.380 50.000 19.93 0.70 38.20 2.23
4286 6053 2.025416 ACCCATAAACAGCTGGCACATA 60.025 45.455 19.93 3.78 38.20 2.29
4287 6054 1.272648 ACCCATAAACAGCTGGCACAT 60.273 47.619 19.93 2.56 38.20 3.21
4288 6055 0.112218 ACCCATAAACAGCTGGCACA 59.888 50.000 19.93 0.00 0.00 4.57
4289 6056 0.527565 CACCCATAAACAGCTGGCAC 59.472 55.000 19.93 0.00 0.00 5.01
4290 6057 0.112218 ACACCCATAAACAGCTGGCA 59.888 50.000 19.93 2.32 0.00 4.92
4291 6058 2.017049 CTACACCCATAAACAGCTGGC 58.983 52.381 19.93 0.00 0.00 4.85
4292 6059 2.017049 GCTACACCCATAAACAGCTGG 58.983 52.381 19.93 0.00 0.00 4.85
4293 6060 2.991250 AGCTACACCCATAAACAGCTG 58.009 47.619 13.48 13.48 37.93 4.24
4294 6061 3.244911 ACAAGCTACACCCATAAACAGCT 60.245 43.478 0.00 0.00 40.94 4.24
4295 6062 3.081804 ACAAGCTACACCCATAAACAGC 58.918 45.455 0.00 0.00 0.00 4.40
4296 6063 4.759693 TCAACAAGCTACACCCATAAACAG 59.240 41.667 0.00 0.00 0.00 3.16
4297 6064 4.720046 TCAACAAGCTACACCCATAAACA 58.280 39.130 0.00 0.00 0.00 2.83
4298 6065 5.001232 TCTCAACAAGCTACACCCATAAAC 58.999 41.667 0.00 0.00 0.00 2.01
4299 6066 5.221843 ACTCTCAACAAGCTACACCCATAAA 60.222 40.000 0.00 0.00 0.00 1.40
4300 6067 4.286032 ACTCTCAACAAGCTACACCCATAA 59.714 41.667 0.00 0.00 0.00 1.90
4301 6068 3.838317 ACTCTCAACAAGCTACACCCATA 59.162 43.478 0.00 0.00 0.00 2.74
4302 6069 2.639839 ACTCTCAACAAGCTACACCCAT 59.360 45.455 0.00 0.00 0.00 4.00
4303 6070 2.047061 ACTCTCAACAAGCTACACCCA 58.953 47.619 0.00 0.00 0.00 4.51
4304 6071 2.841442 ACTCTCAACAAGCTACACCC 57.159 50.000 0.00 0.00 0.00 4.61
4305 6072 7.321153 TCTATAAACTCTCAACAAGCTACACC 58.679 38.462 0.00 0.00 0.00 4.16
4306 6073 8.244802 TCTCTATAAACTCTCAACAAGCTACAC 58.755 37.037 0.00 0.00 0.00 2.90
4307 6074 8.349568 TCTCTATAAACTCTCAACAAGCTACA 57.650 34.615 0.00 0.00 0.00 2.74
4308 6075 9.810545 AATCTCTATAAACTCTCAACAAGCTAC 57.189 33.333 0.00 0.00 0.00 3.58
4310 6077 9.160496 CAAATCTCTATAAACTCTCAACAAGCT 57.840 33.333 0.00 0.00 0.00 3.74
4311 6078 7.907563 GCAAATCTCTATAAACTCTCAACAAGC 59.092 37.037 0.00 0.00 0.00 4.01
4312 6079 8.939929 TGCAAATCTCTATAAACTCTCAACAAG 58.060 33.333 0.00 0.00 0.00 3.16
4313 6080 8.846943 TGCAAATCTCTATAAACTCTCAACAA 57.153 30.769 0.00 0.00 0.00 2.83
4314 6081 8.886719 CATGCAAATCTCTATAAACTCTCAACA 58.113 33.333 0.00 0.00 0.00 3.33
4315 6082 7.854916 GCATGCAAATCTCTATAAACTCTCAAC 59.145 37.037 14.21 0.00 0.00 3.18
4316 6083 7.254556 CGCATGCAAATCTCTATAAACTCTCAA 60.255 37.037 19.57 0.00 0.00 3.02
4317 6084 6.201615 CGCATGCAAATCTCTATAAACTCTCA 59.798 38.462 19.57 0.00 0.00 3.27
4318 6085 6.201806 ACGCATGCAAATCTCTATAAACTCTC 59.798 38.462 19.57 0.00 0.00 3.20
4319 6086 6.051717 ACGCATGCAAATCTCTATAAACTCT 58.948 36.000 19.57 0.00 0.00 3.24
4320 6087 6.292389 ACGCATGCAAATCTCTATAAACTC 57.708 37.500 19.57 0.00 0.00 3.01
4321 6088 6.986817 ACTACGCATGCAAATCTCTATAAACT 59.013 34.615 19.57 0.00 0.00 2.66
4322 6089 7.178712 ACTACGCATGCAAATCTCTATAAAC 57.821 36.000 19.57 0.00 0.00 2.01
4323 6090 7.279981 ACAACTACGCATGCAAATCTCTATAAA 59.720 33.333 19.57 0.00 0.00 1.40
4324 6091 6.761242 ACAACTACGCATGCAAATCTCTATAA 59.239 34.615 19.57 0.00 0.00 0.98
4325 6092 6.280643 ACAACTACGCATGCAAATCTCTATA 58.719 36.000 19.57 0.00 0.00 1.31
4326 6093 5.118990 ACAACTACGCATGCAAATCTCTAT 58.881 37.500 19.57 0.00 0.00 1.98
4327 6094 4.503910 ACAACTACGCATGCAAATCTCTA 58.496 39.130 19.57 0.00 0.00 2.43
4328 6095 3.338249 ACAACTACGCATGCAAATCTCT 58.662 40.909 19.57 0.00 0.00 3.10
4329 6096 3.747099 ACAACTACGCATGCAAATCTC 57.253 42.857 19.57 0.00 0.00 2.75
4330 6097 3.623060 CCTACAACTACGCATGCAAATCT 59.377 43.478 19.57 0.00 0.00 2.40
4331 6098 3.242739 CCCTACAACTACGCATGCAAATC 60.243 47.826 19.57 0.00 0.00 2.17
4332 6099 2.682856 CCCTACAACTACGCATGCAAAT 59.317 45.455 19.57 4.84 0.00 2.32
4333 6100 2.080693 CCCTACAACTACGCATGCAAA 58.919 47.619 19.57 3.41 0.00 3.68
4334 6101 1.002659 ACCCTACAACTACGCATGCAA 59.997 47.619 19.57 3.82 0.00 4.08
4335 6102 0.611200 ACCCTACAACTACGCATGCA 59.389 50.000 19.57 0.00 0.00 3.96
4336 6103 1.664151 GAACCCTACAACTACGCATGC 59.336 52.381 7.91 7.91 0.00 4.06
4337 6104 2.967362 TGAACCCTACAACTACGCATG 58.033 47.619 0.00 0.00 0.00 4.06
4338 6105 3.531538 CATGAACCCTACAACTACGCAT 58.468 45.455 0.00 0.00 0.00 4.73
4339 6106 2.933492 GCATGAACCCTACAACTACGCA 60.933 50.000 0.00 0.00 0.00 5.24
4340 6107 1.664151 GCATGAACCCTACAACTACGC 59.336 52.381 0.00 0.00 0.00 4.42
4341 6108 3.247006 AGCATGAACCCTACAACTACG 57.753 47.619 0.00 0.00 0.00 3.51
4342 6109 4.156008 CCAAAGCATGAACCCTACAACTAC 59.844 45.833 0.00 0.00 0.00 2.73
4343 6110 4.331968 CCAAAGCATGAACCCTACAACTA 58.668 43.478 0.00 0.00 0.00 2.24
4344 6111 3.157087 CCAAAGCATGAACCCTACAACT 58.843 45.455 0.00 0.00 0.00 3.16
4345 6112 2.231235 CCCAAAGCATGAACCCTACAAC 59.769 50.000 0.00 0.00 0.00 3.32
4346 6113 2.109128 TCCCAAAGCATGAACCCTACAA 59.891 45.455 0.00 0.00 0.00 2.41
4347 6114 1.707989 TCCCAAAGCATGAACCCTACA 59.292 47.619 0.00 0.00 0.00 2.74
4377 6144 1.801178 CGAGGCAAAACCAGAAGAGAC 59.199 52.381 0.00 0.00 43.14 3.36
4417 6184 3.592059 AGCACATGCCAAAATGATCAAC 58.408 40.909 0.00 0.00 43.38 3.18
4420 6187 4.604976 GACTAGCACATGCCAAAATGATC 58.395 43.478 0.00 0.00 43.38 2.92
4424 6191 1.745087 CCGACTAGCACATGCCAAAAT 59.255 47.619 0.00 0.00 43.38 1.82
4433 6200 2.167398 GACCAAGCCCGACTAGCACA 62.167 60.000 0.00 0.00 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.