Multiple sequence alignment - TraesCS6D01G358500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G358500 chr6D 100.000 7914 0 0 1 7914 451184882 451176969 0.000000e+00 14615.0
1 TraesCS6D01G358500 chr6D 88.235 85 10 0 7679 7763 283795770 283795854 1.410000e-17 102.0
2 TraesCS6D01G358500 chr6B 92.719 4244 215 53 1 4221 685352214 685348042 0.000000e+00 6039.0
3 TraesCS6D01G358500 chr6B 85.742 1571 139 39 4318 5859 685348008 685346494 0.000000e+00 1581.0
4 TraesCS6D01G358500 chr6B 90.352 995 80 9 5894 6875 685346420 685345429 0.000000e+00 1291.0
5 TraesCS6D01G358500 chr6B 94.142 478 22 4 7081 7554 685345261 685344786 0.000000e+00 723.0
6 TraesCS6D01G358500 chr6B 90.435 115 11 0 7799 7913 685344501 685344387 1.380000e-32 152.0
7 TraesCS6D01G358500 chr6A 94.615 3417 105 25 835 4219 596912863 596909494 0.000000e+00 5217.0
8 TraesCS6D01G358500 chr6A 91.684 974 52 18 4783 5735 596908999 596908034 0.000000e+00 1323.0
9 TraesCS6D01G358500 chr6A 90.562 996 73 12 5900 6875 596906240 596905246 0.000000e+00 1299.0
10 TraesCS6D01G358500 chr6A 96.033 479 15 3 4241 4718 596909510 596909035 0.000000e+00 776.0
11 TraesCS6D01G358500 chr6A 94.324 370 13 4 7081 7447 596905080 596904716 1.930000e-155 560.0
12 TraesCS6D01G358500 chr6A 90.909 66 5 1 5795 5859 596906419 596906354 3.930000e-13 87.9
13 TraesCS6D01G358500 chr4B 90.995 844 69 6 1 837 561005974 561006817 0.000000e+00 1131.0
14 TraesCS6D01G358500 chr4B 89.903 822 75 5 1 819 463083340 463082524 0.000000e+00 1051.0
15 TraesCS6D01G358500 chr4B 88.235 85 10 0 7679 7763 488694883 488694967 1.410000e-17 102.0
16 TraesCS6D01G358500 chr3B 90.985 843 70 6 1 838 21629300 21628459 0.000000e+00 1131.0
17 TraesCS6D01G358500 chr1B 91.635 789 63 3 1 787 189342936 189342149 0.000000e+00 1088.0
18 TraesCS6D01G358500 chr5B 89.750 839 82 4 1 835 67665836 67664998 0.000000e+00 1070.0
19 TraesCS6D01G358500 chr5B 90.244 82 7 1 7682 7763 411034926 411035006 1.090000e-18 106.0
20 TraesCS6D01G358500 chr5D 89.786 842 69 11 1 834 394148021 394148853 0.000000e+00 1062.0
21 TraesCS6D01G358500 chr2B 88.994 845 82 10 1 838 108509446 108508606 0.000000e+00 1035.0
22 TraesCS6D01G358500 chr2B 85.915 71 5 5 4275 4342 794818979 794818911 3.960000e-08 71.3
23 TraesCS6D01G358500 chr7B 88.769 837 87 6 1 833 389804039 389804872 0.000000e+00 1018.0
24 TraesCS6D01G358500 chr7D 83.417 199 29 4 7176 7372 45190527 45190723 1.750000e-41 182.0
25 TraesCS6D01G358500 chr7D 83.417 199 29 4 7176 7372 45226017 45226213 1.750000e-41 182.0
26 TraesCS6D01G358500 chr4D 90.588 85 8 0 7679 7763 66003665 66003749 6.490000e-21 113.0
27 TraesCS6D01G358500 chr4D 89.535 86 7 2 7679 7763 418772499 418772415 3.020000e-19 108.0
28 TraesCS6D01G358500 chr5A 89.412 85 9 0 7679 7763 709611061 709611145 3.020000e-19 108.0
29 TraesCS6D01G358500 chr3D 88.372 86 10 0 7679 7764 613838088 613838003 3.910000e-18 104.0
30 TraesCS6D01G358500 chr3D 94.286 35 2 0 4299 4333 509082800 509082766 4.000000e-03 54.7
31 TraesCS6D01G358500 chr2A 87.778 90 9 2 7679 7766 11665118 11665207 3.910000e-18 104.0
32 TraesCS6D01G358500 chrUn 88.235 85 10 0 7679 7763 28955436 28955520 1.410000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G358500 chr6D 451176969 451184882 7913 True 14615.000000 14615 100.000000 1 7914 1 chr6D.!!$R1 7913
1 TraesCS6D01G358500 chr6B 685344387 685352214 7827 True 1957.200000 6039 90.678000 1 7913 5 chr6B.!!$R1 7912
2 TraesCS6D01G358500 chr6A 596904716 596912863 8147 True 1543.816667 5217 93.021167 835 7447 6 chr6A.!!$R1 6612
3 TraesCS6D01G358500 chr4B 561005974 561006817 843 False 1131.000000 1131 90.995000 1 837 1 chr4B.!!$F2 836
4 TraesCS6D01G358500 chr4B 463082524 463083340 816 True 1051.000000 1051 89.903000 1 819 1 chr4B.!!$R1 818
5 TraesCS6D01G358500 chr3B 21628459 21629300 841 True 1131.000000 1131 90.985000 1 838 1 chr3B.!!$R1 837
6 TraesCS6D01G358500 chr1B 189342149 189342936 787 True 1088.000000 1088 91.635000 1 787 1 chr1B.!!$R1 786
7 TraesCS6D01G358500 chr5B 67664998 67665836 838 True 1070.000000 1070 89.750000 1 835 1 chr5B.!!$R1 834
8 TraesCS6D01G358500 chr5D 394148021 394148853 832 False 1062.000000 1062 89.786000 1 834 1 chr5D.!!$F1 833
9 TraesCS6D01G358500 chr2B 108508606 108509446 840 True 1035.000000 1035 88.994000 1 838 1 chr2B.!!$R1 837
10 TraesCS6D01G358500 chr7B 389804039 389804872 833 False 1018.000000 1018 88.769000 1 833 1 chr7B.!!$F1 832

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 1.939769 GCGTGACCTCTCTCCCTGTC 61.940 65.0 0.00 0.0 0.00 3.51 F
1428 1458 0.099436 GAGCGCATGCCAAGTTAAGG 59.901 55.0 13.15 0.0 44.31 2.69 F
1952 1999 0.876399 TGCTCGCACAGTACTTCGTA 59.124 50.0 0.00 0.0 0.00 3.43 F
2640 2689 2.113860 TTGAGGGAGAATTTGAGCGG 57.886 50.0 0.00 0.0 0.00 5.52 F
4398 4463 2.096713 CACAGTTTAGTTCGCTCTGTGC 60.097 50.0 9.95 0.0 45.47 4.57 F
5117 5190 0.179234 TGCTGTGGTTCTTGAACCGA 59.821 50.0 22.67 13.5 45.75 4.69 F
6618 8354 0.036732 TGGATGGTCAAGGTGACTGC 59.963 55.0 8.21 0.0 46.19 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1565 1600 1.028868 GCTGCTTGCTTCCGAGGAAT 61.029 55.000 4.88 0.00 38.95 3.01 R
2714 2763 3.434167 GCAGAGGGCAAAGATCTTGGATA 60.434 47.826 14.40 0.00 43.97 2.59 R
3730 3782 2.538449 ACGAACTTATTTATGGCGCTCG 59.462 45.455 7.64 6.54 0.00 5.03 R
4475 4540 2.476241 CTCGCAAAGCAAACCAAAATCC 59.524 45.455 0.00 0.00 0.00 3.01 R
5918 7643 0.108377 TGCGTCGCATATTGACTGGT 60.108 50.000 17.58 0.00 31.71 4.00 R
6695 8440 0.034380 TCCCTCACGACCTCCTGTAG 60.034 60.000 0.00 0.00 0.00 2.74 R
7599 9344 0.032130 CATTGCATCTCATGGCTGCC 59.968 55.000 12.87 12.87 35.02 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 2.501128 GCATAGAGCAGGGCGTGA 59.499 61.111 12.03 0.00 44.79 4.35
59 60 1.939769 GCGTGACCTCTCTCCCTGTC 61.940 65.000 0.00 0.00 0.00 3.51
231 235 9.887862 AAGAAAAATTCATCCCACTATCCATAT 57.112 29.630 0.00 0.00 0.00 1.78
265 269 2.017049 GTGTCAAACACCTTGCAGTCT 58.983 47.619 0.00 0.00 43.05 3.24
413 417 2.326529 ATATCCCCTCTGCCACCGGA 62.327 60.000 9.46 0.00 0.00 5.14
880 895 4.015406 TTCGCTGGCCACGTGGAT 62.015 61.111 38.30 0.00 37.39 3.41
1428 1458 0.099436 GAGCGCATGCCAAGTTAAGG 59.901 55.000 13.15 0.00 44.31 2.69
1452 1487 4.341806 TCACATCACATTGCCTTGTTTCTT 59.658 37.500 0.00 0.00 0.00 2.52
1544 1579 1.588139 GGTGTACGCCGATTCCTCG 60.588 63.158 10.25 0.00 44.62 4.63
1668 1706 2.976099 GGTCCCAAACCCAATGGAG 58.024 57.895 0.00 0.00 42.85 3.86
1673 1711 0.890683 CCAAACCCAATGGAGAGCAC 59.109 55.000 0.00 0.00 40.56 4.40
1754 1799 1.971357 CCAGGTTCCTCAGTGTACACT 59.029 52.381 22.95 22.95 43.61 3.55
1798 1843 3.625764 GCTTCACTGGTCACACTGTTAAA 59.374 43.478 0.00 0.00 0.00 1.52
1801 1846 5.601583 TCACTGGTCACACTGTTAAACTA 57.398 39.130 0.00 0.00 0.00 2.24
1812 1859 7.721842 TCACACTGTTAAACTATTTTCCCATGA 59.278 33.333 0.00 0.00 0.00 3.07
1855 1902 3.643978 GCTGATGATGGCCGACGC 61.644 66.667 0.00 0.00 0.00 5.19
1880 1927 4.032960 TGCCCTCAACTTGTATGTCAAT 57.967 40.909 0.00 0.00 35.35 2.57
1900 1947 6.009589 TCAATTACTTCTTGGCCATTCTCAA 58.990 36.000 6.09 0.00 0.00 3.02
1952 1999 0.876399 TGCTCGCACAGTACTTCGTA 59.124 50.000 0.00 0.00 0.00 3.43
2042 2090 8.175716 CCTTTACCTAGATTTTTACTTGCTTCG 58.824 37.037 0.00 0.00 0.00 3.79
2049 2097 4.419522 TTTTTACTTGCTTCGGCTGATC 57.580 40.909 0.00 0.00 42.37 2.92
2071 2119 6.544038 TCTGTATAATGGTTTGATGCGATG 57.456 37.500 0.00 0.00 0.00 3.84
2118 2166 4.778143 ATTCCTCGTGGGTGCGGC 62.778 66.667 3.23 0.00 36.25 6.53
2331 2379 4.639310 GTCATCCACTTCGAGTTACTCCTA 59.361 45.833 6.80 0.00 0.00 2.94
2399 2448 5.463154 ACAAGACCTGATATCTTAGGCTCT 58.537 41.667 8.66 8.09 37.61 4.09
2436 2485 8.072480 AGGTTAGGTAAAACTACTCCAGGATAT 58.928 37.037 0.00 0.00 31.55 1.63
2640 2689 2.113860 TTGAGGGAGAATTTGAGCGG 57.886 50.000 0.00 0.00 0.00 5.52
3000 3050 6.401153 GCCTGTCAATAGTAGTCACTTTTTCG 60.401 42.308 0.00 0.00 36.14 3.46
3002 3052 6.751157 TGTCAATAGTAGTCACTTTTTCGGA 58.249 36.000 0.00 0.00 36.14 4.55
3008 3058 3.692791 AGTCACTTTTTCGGAACAAGC 57.307 42.857 14.77 1.73 0.00 4.01
3013 3063 6.039382 AGTCACTTTTTCGGAACAAGCTTTAT 59.961 34.615 14.77 0.00 0.00 1.40
3014 3064 6.695713 GTCACTTTTTCGGAACAAGCTTTATT 59.304 34.615 14.77 0.00 0.00 1.40
3095 3145 6.153170 TGGACACGAGAAGTACCACATAAATA 59.847 38.462 0.00 0.00 34.96 1.40
3135 3185 4.274950 TGTTTAGCTTTCCTGTTCTTTCCG 59.725 41.667 0.00 0.00 0.00 4.30
3188 3238 7.912383 ACAATTGCAGCATTTTCTATTATTGC 58.088 30.769 5.05 0.00 0.00 3.56
3231 3282 8.347035 TGCCTTGTTTATTCAGTTGTTTACTAC 58.653 33.333 0.00 0.00 34.56 2.73
3315 3366 4.101585 CCTCTATGCTGATGAGTTGGGTAA 59.898 45.833 0.00 0.00 0.00 2.85
3613 3664 3.950395 AGGAATTTCTGGTAGCATTGCTC 59.050 43.478 15.81 6.97 40.44 4.26
3730 3782 8.665685 AGTTATTTGTCCGATTTGACATAAGAC 58.334 33.333 0.00 0.00 44.27 3.01
3750 3802 2.538449 ACGAGCGCCATAAATAAGTTCG 59.462 45.455 2.29 4.55 40.43 3.95
3766 3818 2.158871 AGTTCGTTACCAACCAAGCAGA 60.159 45.455 0.00 0.00 0.00 4.26
3767 3819 2.163818 TCGTTACCAACCAAGCAGAG 57.836 50.000 0.00 0.00 0.00 3.35
3838 3890 9.944376 ATAACTTAGTGAGTGCTTCTTTATCAA 57.056 29.630 0.00 0.00 39.00 2.57
3857 3909 9.434420 TTTATCAATTAAAGGTTGCAATTCAGG 57.566 29.630 0.59 0.00 0.00 3.86
3858 3910 6.662865 TCAATTAAAGGTTGCAATTCAGGA 57.337 33.333 0.59 0.00 0.00 3.86
3859 3911 6.454795 TCAATTAAAGGTTGCAATTCAGGAC 58.545 36.000 0.59 0.00 0.00 3.85
3908 3968 6.148645 TGCTTGTCTGAGAATAACGCAAATTA 59.851 34.615 0.00 0.00 0.00 1.40
4086 4148 3.492102 TTAGTGCAGCTCCTTGAAACT 57.508 42.857 0.00 0.00 0.00 2.66
4193 4256 5.009631 TGCATGCTACAAAGTAAATGACCT 58.990 37.500 20.33 0.00 0.00 3.85
4202 4265 6.765403 ACAAAGTAAATGACCTGCTACAGTA 58.235 36.000 0.00 0.00 0.00 2.74
4203 4266 7.221450 ACAAAGTAAATGACCTGCTACAGTAA 58.779 34.615 0.00 0.00 0.00 2.24
4204 4267 7.883311 ACAAAGTAAATGACCTGCTACAGTAAT 59.117 33.333 0.00 0.00 0.00 1.89
4205 4268 7.849804 AAGTAAATGACCTGCTACAGTAATG 57.150 36.000 0.00 0.00 0.00 1.90
4206 4269 7.182817 AGTAAATGACCTGCTACAGTAATGA 57.817 36.000 0.00 0.00 0.00 2.57
4207 4270 7.268586 AGTAAATGACCTGCTACAGTAATGAG 58.731 38.462 0.00 0.00 0.00 2.90
4208 4271 5.683876 AATGACCTGCTACAGTAATGAGT 57.316 39.130 0.00 0.00 0.00 3.41
4209 4272 6.791867 AATGACCTGCTACAGTAATGAGTA 57.208 37.500 0.00 0.00 0.00 2.59
4210 4273 5.836821 TGACCTGCTACAGTAATGAGTAG 57.163 43.478 0.00 0.00 40.45 2.57
4211 4274 5.506708 TGACCTGCTACAGTAATGAGTAGA 58.493 41.667 0.00 0.00 40.02 2.59
4212 4275 5.357314 TGACCTGCTACAGTAATGAGTAGAC 59.643 44.000 0.00 0.00 40.02 2.59
4213 4276 4.645588 ACCTGCTACAGTAATGAGTAGACC 59.354 45.833 0.00 0.00 40.02 3.85
4214 4277 4.645136 CCTGCTACAGTAATGAGTAGACCA 59.355 45.833 0.00 0.00 40.02 4.02
4215 4278 5.127194 CCTGCTACAGTAATGAGTAGACCAA 59.873 44.000 0.00 0.00 40.02 3.67
4216 4279 6.183360 CCTGCTACAGTAATGAGTAGACCAAT 60.183 42.308 0.00 0.00 40.02 3.16
4217 4280 7.014326 CCTGCTACAGTAATGAGTAGACCAATA 59.986 40.741 0.00 0.00 40.02 1.90
4218 4281 8.478775 TGCTACAGTAATGAGTAGACCAATAT 57.521 34.615 0.00 0.00 40.02 1.28
4219 4282 8.924303 TGCTACAGTAATGAGTAGACCAATATT 58.076 33.333 0.00 0.00 40.02 1.28
4220 4283 9.413048 GCTACAGTAATGAGTAGACCAATATTC 57.587 37.037 0.00 0.00 40.02 1.75
4221 4284 9.915629 CTACAGTAATGAGTAGACCAATATTCC 57.084 37.037 0.00 0.00 40.02 3.01
4222 4285 7.736893 ACAGTAATGAGTAGACCAATATTCCC 58.263 38.462 0.00 0.00 0.00 3.97
4223 4286 7.162082 CAGTAATGAGTAGACCAATATTCCCC 58.838 42.308 0.00 0.00 0.00 4.81
4224 4287 5.584551 AATGAGTAGACCAATATTCCCCC 57.415 43.478 0.00 0.00 0.00 5.40
4225 4288 4.295905 TGAGTAGACCAATATTCCCCCT 57.704 45.455 0.00 0.00 0.00 4.79
4226 4289 4.232091 TGAGTAGACCAATATTCCCCCTC 58.768 47.826 0.00 0.00 0.00 4.30
4227 4290 4.077982 TGAGTAGACCAATATTCCCCCTCT 60.078 45.833 0.00 0.00 0.00 3.69
4228 4291 4.908481 GAGTAGACCAATATTCCCCCTCTT 59.092 45.833 0.00 0.00 0.00 2.85
4229 4292 5.297799 AGTAGACCAATATTCCCCCTCTTT 58.702 41.667 0.00 0.00 0.00 2.52
4230 4293 5.736616 AGTAGACCAATATTCCCCCTCTTTT 59.263 40.000 0.00 0.00 0.00 2.27
4231 4294 4.871822 AGACCAATATTCCCCCTCTTTTG 58.128 43.478 0.00 0.00 0.00 2.44
4232 4295 3.374764 ACCAATATTCCCCCTCTTTTGC 58.625 45.455 0.00 0.00 0.00 3.68
4233 4296 3.012844 ACCAATATTCCCCCTCTTTTGCT 59.987 43.478 0.00 0.00 0.00 3.91
4234 4297 4.231890 ACCAATATTCCCCCTCTTTTGCTA 59.768 41.667 0.00 0.00 0.00 3.49
4235 4298 5.208121 CCAATATTCCCCCTCTTTTGCTAA 58.792 41.667 0.00 0.00 0.00 3.09
4236 4299 5.660864 CCAATATTCCCCCTCTTTTGCTAAA 59.339 40.000 0.00 0.00 0.00 1.85
4237 4300 6.156083 CCAATATTCCCCCTCTTTTGCTAAAA 59.844 38.462 0.00 0.00 0.00 1.52
4238 4301 7.310983 CCAATATTCCCCCTCTTTTGCTAAAAA 60.311 37.037 0.00 0.00 34.17 1.94
4389 4454 8.549338 AACTATAAAGGCTCACAGTTTAGTTC 57.451 34.615 0.00 0.00 0.00 3.01
4398 4463 2.096713 CACAGTTTAGTTCGCTCTGTGC 60.097 50.000 9.95 0.00 45.47 4.57
4421 4486 9.986833 GTGCAATTATATTTCAAATGTTTTCCC 57.013 29.630 0.00 0.00 0.00 3.97
4428 4493 4.946478 TTCAAATGTTTTCCCGGTGAAT 57.054 36.364 0.00 0.00 31.67 2.57
4433 4498 7.093992 TCAAATGTTTTCCCGGTGAATTATTC 58.906 34.615 0.00 0.00 31.67 1.75
4475 4540 9.831737 CATCTTCTTAAACATGTTAGGTTTCTG 57.168 33.333 12.39 0.79 39.12 3.02
4646 4711 6.957631 AGTGACCATGGTAATATGTTTGAGA 58.042 36.000 19.80 0.00 0.00 3.27
4744 4813 8.934023 ATATGTATACGATTTCCCACCAAAAT 57.066 30.769 0.00 0.00 0.00 1.82
4747 4816 8.754991 TGTATACGATTTCCCACCAAAATATT 57.245 30.769 0.00 0.00 0.00 1.28
4749 4818 9.458374 GTATACGATTTCCCACCAAAATATTTG 57.542 33.333 0.39 0.00 0.00 2.32
4775 4844 6.092122 TCAGATTCGTTGTCCACACAATTATC 59.908 38.462 0.00 0.00 44.47 1.75
4776 4845 6.092670 CAGATTCGTTGTCCACACAATTATCT 59.907 38.462 0.00 0.00 44.47 1.98
4777 4846 7.277760 CAGATTCGTTGTCCACACAATTATCTA 59.722 37.037 8.05 0.00 44.47 1.98
4780 4849 6.460781 TCGTTGTCCACACAATTATCTACTT 58.539 36.000 0.00 0.00 44.47 2.24
4794 4863 3.543680 TCTACTTGCCTCTGCCATTAC 57.456 47.619 0.00 0.00 36.33 1.89
4872 4942 8.617809 TGATTTACTGCCCGTTAGATTATTTTC 58.382 33.333 0.00 0.00 0.00 2.29
4874 4944 8.570068 TTTACTGCCCGTTAGATTATTTTCTT 57.430 30.769 0.00 0.00 0.00 2.52
4910 4980 9.781834 TTATTTCTTACAATATTGTCTTTGCCG 57.218 29.630 24.00 6.79 42.35 5.69
4947 5018 1.575419 ACATTGGGCGAGGTAACCTA 58.425 50.000 0.00 0.00 31.76 3.08
5117 5190 0.179234 TGCTGTGGTTCTTGAACCGA 59.821 50.000 22.67 13.50 45.75 4.69
5177 5250 9.109393 GTCCATAGCACTTAAATATCACTTTCA 57.891 33.333 0.00 0.00 0.00 2.69
5267 5340 7.118680 TCGGTTGTTAAGATAATGAACTGGTTC 59.881 37.037 6.53 6.53 39.91 3.62
5336 5409 8.675504 TGTTTTGATTGCAATTTGTTTCTTCAT 58.324 25.926 14.33 0.00 33.25 2.57
5422 5496 3.301794 ACATTTCAGGCAGCATATCCA 57.698 42.857 0.00 0.00 0.00 3.41
5452 5526 7.187824 TGTTAGGAAGCTTCTGTCTGATAAT 57.812 36.000 25.05 2.84 0.00 1.28
5496 5570 6.817765 CCTGCATCAGGTACTTCTTTTTAA 57.182 37.500 4.74 0.00 45.82 1.52
5534 5609 3.696281 CAGAATGGCATGCGTGATTAA 57.304 42.857 12.44 0.00 0.00 1.40
5535 5610 3.624900 CAGAATGGCATGCGTGATTAAG 58.375 45.455 12.44 2.75 0.00 1.85
5537 5612 3.696051 AGAATGGCATGCGTGATTAAGTT 59.304 39.130 12.44 0.00 0.00 2.66
5538 5613 4.158394 AGAATGGCATGCGTGATTAAGTTT 59.842 37.500 12.44 0.00 0.00 2.66
5565 5654 6.936335 TCTAATTGATTGCTTCACTGTTCTGA 59.064 34.615 0.00 0.00 32.84 3.27
5578 5671 6.625362 TCACTGTTCTGATGTCTTAGCTAAG 58.375 40.000 24.90 24.90 34.65 2.18
5589 5682 8.035394 TGATGTCTTAGCTAAGGTTAGTCTTTG 58.965 37.037 28.81 4.38 34.14 2.77
5609 5702 8.070171 GTCTTTGAAACACATATTATCATCCGG 58.930 37.037 0.00 0.00 0.00 5.14
5610 5703 7.773224 TCTTTGAAACACATATTATCATCCGGT 59.227 33.333 0.00 0.00 0.00 5.28
5624 5717 8.897872 TTATCATCCGGTTCCTCTTTTATAAC 57.102 34.615 0.00 0.00 0.00 1.89
5636 5729 8.718102 TCCTCTTTTATAACATGACTAGTTGC 57.282 34.615 0.00 0.00 0.00 4.17
5644 5737 3.600388 ACATGACTAGTTGCCAGCTAAC 58.400 45.455 0.00 0.00 0.00 2.34
5654 5747 1.675641 CCAGCTAACAGGCACCACC 60.676 63.158 0.00 0.00 39.61 4.61
5677 5770 8.632679 CACCCAGCAATATACTTTCATATTTGT 58.367 33.333 0.00 0.00 30.35 2.83
5730 7096 8.924511 AAGATTCACAGAAAATCTTTACCTCA 57.075 30.769 5.50 0.00 46.31 3.86
5746 7113 4.437772 ACCTCAACTACTTTCGACTAGC 57.562 45.455 0.00 0.00 0.00 3.42
5772 7139 1.139520 CCCACATTTAAGCAGCGGC 59.860 57.895 0.00 0.00 41.61 6.53
5773 7140 1.594194 CCCACATTTAAGCAGCGGCA 61.594 55.000 12.44 0.00 44.61 5.69
5777 7144 2.346244 CACATTTAAGCAGCGGCATTTG 59.654 45.455 12.44 3.85 44.61 2.32
5827 7478 1.649633 TGGGCTCCCTAGTTCCTCTTA 59.350 52.381 6.50 0.00 36.94 2.10
5832 7484 4.202377 GGCTCCCTAGTTCCTCTTAAATCC 60.202 50.000 0.00 0.00 0.00 3.01
5833 7485 4.501743 GCTCCCTAGTTCCTCTTAAATCCG 60.502 50.000 0.00 0.00 0.00 4.18
5856 7508 6.087522 CGCTAGCAATATGTAAGACTAGTCC 58.912 44.000 19.38 5.00 31.77 3.85
5871 7567 5.071788 AGACTAGTCCAGTTTCAATGTTCCA 59.928 40.000 19.38 0.00 37.72 3.53
5872 7568 5.063880 ACTAGTCCAGTTTCAATGTTCCAC 58.936 41.667 0.00 0.00 31.59 4.02
5876 7572 0.591170 AGTTTCAATGTTCCACGGCG 59.409 50.000 4.80 4.80 0.00 6.46
5878 7574 1.448119 TTTCAATGTTCCACGGCGCA 61.448 50.000 10.83 0.00 0.00 6.09
5879 7575 2.123988 TTCAATGTTCCACGGCGCAC 62.124 55.000 10.83 0.00 0.00 5.34
5880 7576 2.593148 AATGTTCCACGGCGCACA 60.593 55.556 10.83 3.63 0.00 4.57
5886 7582 2.933878 TTCCACGGCGCACACTTCTT 62.934 55.000 10.83 0.00 0.00 2.52
5888 7584 3.036084 ACGGCGCACACTTCTTCG 61.036 61.111 10.83 1.96 0.00 3.79
5918 7643 4.694760 AGCATCTGCCATATTACTGACA 57.305 40.909 0.00 0.00 43.38 3.58
5922 7647 4.406648 TCTGCCATATTACTGACACCAG 57.593 45.455 0.00 0.00 45.76 4.00
5935 7664 1.588404 GACACCAGTCAATATGCGACG 59.412 52.381 0.00 0.00 44.34 5.12
5953 7682 1.608590 ACGCAGGTGATTTTCAACAGG 59.391 47.619 0.00 0.00 36.30 4.00
6032 7761 6.794534 AGGTAGATTTCCAGTTCTGGATTTT 58.205 36.000 20.26 9.64 37.87 1.82
6033 7762 7.928873 AGGTAGATTTCCAGTTCTGGATTTTA 58.071 34.615 20.26 9.44 37.87 1.52
6080 7809 7.177216 ACATAATTGCTTTTCTGAATGGTCTGA 59.823 33.333 0.00 0.00 0.00 3.27
6086 7815 4.908601 TTTCTGAATGGTCTGAAGCCTA 57.091 40.909 0.00 0.00 41.19 3.93
6115 7844 3.057526 GGATGCTTAGTTTTCGGCACTTT 60.058 43.478 0.00 0.00 37.52 2.66
6116 7845 4.155280 GGATGCTTAGTTTTCGGCACTTTA 59.845 41.667 0.00 0.00 37.52 1.85
6123 7852 7.328493 GCTTAGTTTTCGGCACTTTAAAATCAT 59.672 33.333 0.00 0.00 0.00 2.45
6127 7856 7.807907 AGTTTTCGGCACTTTAAAATCATACAG 59.192 33.333 0.00 0.00 0.00 2.74
6129 7858 7.624360 TTCGGCACTTTAAAATCATACAGAT 57.376 32.000 0.00 0.00 39.09 2.90
6130 7859 8.725405 TTCGGCACTTTAAAATCATACAGATA 57.275 30.769 0.00 0.00 35.39 1.98
6131 7860 8.365399 TCGGCACTTTAAAATCATACAGATAG 57.635 34.615 0.00 0.00 35.39 2.08
6133 7862 9.256477 CGGCACTTTAAAATCATACAGATAGTA 57.744 33.333 0.00 0.00 35.39 1.82
6149 7880 7.215789 ACAGATAGTATGCTTTCCTCAAGATG 58.784 38.462 0.00 0.00 33.80 2.90
6153 7884 1.442769 TGCTTTCCTCAAGATGCGAC 58.557 50.000 0.00 0.00 33.80 5.19
6154 7885 0.371645 GCTTTCCTCAAGATGCGACG 59.628 55.000 0.00 0.00 33.80 5.12
6158 7889 2.456119 CCTCAAGATGCGACGTGCC 61.456 63.158 0.00 0.00 45.60 5.01
6163 7894 2.202743 GATGCGACGTGCCTGCTA 60.203 61.111 0.00 0.00 45.60 3.49
6169 7900 0.370273 CGACGTGCCTGCTAACATTC 59.630 55.000 0.00 0.00 0.00 2.67
6171 7902 1.661112 GACGTGCCTGCTAACATTCTC 59.339 52.381 0.00 0.00 0.00 2.87
6174 7907 1.740025 GTGCCTGCTAACATTCTCCAC 59.260 52.381 0.00 0.00 0.00 4.02
6182 7915 4.576053 TGCTAACATTCTCCACATATGTGC 59.424 41.667 27.27 13.54 44.34 4.57
6212 7948 3.605664 AGGCAAAACACTGGCGCC 61.606 61.111 22.73 22.73 46.09 6.53
6421 8157 6.721571 TTGCTATTTTCGGACACTTCTTAG 57.278 37.500 0.00 0.00 0.00 2.18
6473 8209 5.527582 TCTTTCCTGAACTAAACTGAACTGC 59.472 40.000 0.00 0.00 0.00 4.40
6474 8210 4.415881 TCCTGAACTAAACTGAACTGCA 57.584 40.909 0.00 0.00 0.00 4.41
6488 8224 2.383368 ACTGCATCTTGAGCTCACTC 57.617 50.000 18.03 4.49 43.76 3.51
6553 8289 2.047655 TCCAAAGACGCGGCGATT 60.048 55.556 30.94 19.48 0.00 3.34
6614 8350 0.692476 CCAGTGGATGGTCAAGGTGA 59.308 55.000 1.68 0.00 44.91 4.02
6616 8352 1.349026 CAGTGGATGGTCAAGGTGACT 59.651 52.381 8.21 0.00 46.19 3.41
6618 8354 0.036732 TGGATGGTCAAGGTGACTGC 59.963 55.000 8.21 0.00 46.19 4.40
6622 8358 0.546122 TGGTCAAGGTGACTGCACTT 59.454 50.000 8.21 0.00 46.19 3.16
6627 8363 3.625764 GTCAAGGTGACTGCACTTAAACA 59.374 43.478 1.09 0.00 43.73 2.83
6629 8365 4.095782 TCAAGGTGACTGCACTTAAACAAC 59.904 41.667 0.00 0.00 44.52 3.32
6630 8366 3.886123 AGGTGACTGCACTTAAACAACT 58.114 40.909 0.00 0.00 44.52 3.16
6639 8378 3.251004 GCACTTAAACAACTCAGGGACAG 59.749 47.826 0.00 0.00 0.00 3.51
6682 8427 1.156736 AAGAAGCACCGATTTCACCG 58.843 50.000 0.00 0.00 0.00 4.94
6739 8484 3.742433 AGGCTGAAGGTCATATTCTCG 57.258 47.619 0.00 0.00 0.00 4.04
6856 8601 3.121030 CGCTTTGCCGTCCTCCTG 61.121 66.667 0.00 0.00 0.00 3.86
6859 8604 1.376037 CTTTGCCGTCCTCCTGTCC 60.376 63.158 0.00 0.00 0.00 4.02
6909 8654 4.292178 GCCCGCGCTAGCTCAGAT 62.292 66.667 13.93 0.00 42.32 2.90
6910 8655 2.049618 CCCGCGCTAGCTCAGATC 60.050 66.667 13.93 0.00 42.32 2.75
6911 8656 2.560119 CCCGCGCTAGCTCAGATCT 61.560 63.158 13.93 0.00 42.32 2.75
6914 8659 0.167908 CGCGCTAGCTCAGATCTAGG 59.832 60.000 13.93 2.57 42.32 3.02
6915 8660 0.525761 GCGCTAGCTCAGATCTAGGG 59.474 60.000 17.17 17.17 44.81 3.53
6916 8661 1.904287 CGCTAGCTCAGATCTAGGGT 58.096 55.000 13.93 0.00 40.26 4.34
6917 8662 2.235016 CGCTAGCTCAGATCTAGGGTT 58.765 52.381 13.93 0.00 40.26 4.11
6918 8663 2.625790 CGCTAGCTCAGATCTAGGGTTT 59.374 50.000 13.93 0.00 40.26 3.27
6919 8664 3.821600 CGCTAGCTCAGATCTAGGGTTTA 59.178 47.826 13.93 0.00 40.26 2.01
6920 8665 4.083003 CGCTAGCTCAGATCTAGGGTTTAG 60.083 50.000 13.93 0.00 40.26 1.85
6922 8667 2.969262 AGCTCAGATCTAGGGTTTAGGC 59.031 50.000 0.00 0.00 0.00 3.93
6923 8668 2.288518 GCTCAGATCTAGGGTTTAGGCG 60.289 54.545 0.00 0.00 0.00 5.52
6924 8669 3.223435 CTCAGATCTAGGGTTTAGGCGA 58.777 50.000 0.00 0.00 0.00 5.54
6925 8670 3.223435 TCAGATCTAGGGTTTAGGCGAG 58.777 50.000 0.00 0.00 0.00 5.03
6926 8671 1.964933 AGATCTAGGGTTTAGGCGAGC 59.035 52.381 0.00 0.00 0.00 5.03
6928 8673 1.112113 TCTAGGGTTTAGGCGAGCAG 58.888 55.000 0.00 0.00 0.00 4.24
6940 8685 1.812922 CGAGCAGCAACCAGGCTAG 60.813 63.158 0.00 0.00 43.68 3.42
6942 8687 2.190488 GAGCAGCAACCAGGCTAGGT 62.190 60.000 0.00 3.20 43.68 3.08
6943 8688 0.909610 AGCAGCAACCAGGCTAGGTA 60.910 55.000 8.70 0.00 43.68 3.08
6948 8693 0.892755 CAACCAGGCTAGGTACACGA 59.107 55.000 8.70 0.00 42.25 4.35
6949 8694 1.274167 CAACCAGGCTAGGTACACGAA 59.726 52.381 8.70 0.00 42.25 3.85
6950 8695 1.636148 ACCAGGCTAGGTACACGAAA 58.364 50.000 6.82 0.00 40.98 3.46
6952 8697 2.369532 ACCAGGCTAGGTACACGAAAAA 59.630 45.455 6.82 0.00 40.98 1.94
6972 8717 6.619801 AAAAAGAACAGTACCACTAGCTTG 57.380 37.500 0.00 0.00 0.00 4.01
6973 8718 3.320673 AGAACAGTACCACTAGCTTGC 57.679 47.619 0.00 0.00 0.00 4.01
6974 8719 2.632996 AGAACAGTACCACTAGCTTGCA 59.367 45.455 0.00 0.00 0.00 4.08
6975 8720 3.071023 AGAACAGTACCACTAGCTTGCAA 59.929 43.478 0.00 0.00 0.00 4.08
6977 8722 4.021102 ACAGTACCACTAGCTTGCAAAT 57.979 40.909 0.00 0.00 0.00 2.32
6978 8723 3.753272 ACAGTACCACTAGCTTGCAAATG 59.247 43.478 0.00 0.00 0.00 2.32
6979 8724 3.753272 CAGTACCACTAGCTTGCAAATGT 59.247 43.478 0.00 0.00 0.00 2.71
6980 8725 4.935205 CAGTACCACTAGCTTGCAAATGTA 59.065 41.667 0.00 0.00 0.00 2.29
6981 8726 5.586243 CAGTACCACTAGCTTGCAAATGTAT 59.414 40.000 0.00 0.00 0.00 2.29
6982 8727 5.817816 AGTACCACTAGCTTGCAAATGTATC 59.182 40.000 0.00 0.00 0.00 2.24
6983 8728 4.588899 ACCACTAGCTTGCAAATGTATCA 58.411 39.130 0.00 0.00 0.00 2.15
6984 8729 4.637534 ACCACTAGCTTGCAAATGTATCAG 59.362 41.667 0.00 0.00 0.00 2.90
6985 8730 4.877823 CCACTAGCTTGCAAATGTATCAGA 59.122 41.667 0.00 0.00 0.00 3.27
6986 8731 5.007430 CCACTAGCTTGCAAATGTATCAGAG 59.993 44.000 0.00 0.00 0.00 3.35
6987 8732 5.583854 CACTAGCTTGCAAATGTATCAGAGT 59.416 40.000 0.00 0.00 0.00 3.24
6988 8733 4.959596 AGCTTGCAAATGTATCAGAGTG 57.040 40.909 0.00 0.00 0.00 3.51
6989 8734 4.582869 AGCTTGCAAATGTATCAGAGTGA 58.417 39.130 0.00 0.00 0.00 3.41
6990 8735 4.394300 AGCTTGCAAATGTATCAGAGTGAC 59.606 41.667 0.00 0.00 0.00 3.67
6991 8736 4.154737 GCTTGCAAATGTATCAGAGTGACA 59.845 41.667 0.00 0.00 0.00 3.58
6992 8737 5.611796 TTGCAAATGTATCAGAGTGACAC 57.388 39.130 0.00 0.00 0.00 3.67
6994 8739 3.062639 GCAAATGTATCAGAGTGACACGG 59.937 47.826 0.00 0.00 0.00 4.94
6995 8740 4.245660 CAAATGTATCAGAGTGACACGGT 58.754 43.478 0.00 0.00 0.00 4.83
6996 8741 3.510388 ATGTATCAGAGTGACACGGTG 57.490 47.619 6.58 6.58 0.00 4.94
6997 8742 2.235891 TGTATCAGAGTGACACGGTGT 58.764 47.619 14.66 14.66 0.00 4.16
6998 8743 3.414269 TGTATCAGAGTGACACGGTGTA 58.586 45.455 14.74 0.00 0.00 2.90
6999 8744 3.189910 TGTATCAGAGTGACACGGTGTAC 59.810 47.826 14.74 12.26 0.00 2.90
7000 8745 1.682740 TCAGAGTGACACGGTGTACA 58.317 50.000 14.74 11.05 0.00 2.90
7001 8746 2.235891 TCAGAGTGACACGGTGTACAT 58.764 47.619 14.74 2.42 0.00 2.29
7003 8748 3.439129 TCAGAGTGACACGGTGTACATAG 59.561 47.826 14.74 3.50 0.00 2.23
7004 8749 3.439129 CAGAGTGACACGGTGTACATAGA 59.561 47.826 14.74 0.00 0.00 1.98
7005 8750 4.096532 CAGAGTGACACGGTGTACATAGAT 59.903 45.833 14.74 2.99 0.00 1.98
7007 8752 4.014406 AGTGACACGGTGTACATAGATGA 58.986 43.478 14.74 0.00 0.00 2.92
7009 8754 5.826208 AGTGACACGGTGTACATAGATGATA 59.174 40.000 14.74 0.00 0.00 2.15
7011 8756 7.664318 AGTGACACGGTGTACATAGATGATATA 59.336 37.037 14.74 0.00 0.00 0.86
7012 8757 8.459635 GTGACACGGTGTACATAGATGATATAT 58.540 37.037 14.74 0.00 0.00 0.86
7013 8758 8.674607 TGACACGGTGTACATAGATGATATATC 58.325 37.037 14.74 5.73 0.00 1.63
7014 8759 8.575649 ACACGGTGTACATAGATGATATATCA 57.424 34.615 17.56 17.56 41.70 2.15
7015 8760 8.678199 ACACGGTGTACATAGATGATATATCAG 58.322 37.037 19.73 9.05 40.64 2.90
7016 8761 8.678199 CACGGTGTACATAGATGATATATCAGT 58.322 37.037 19.73 13.84 40.64 3.41
7017 8762 9.901172 ACGGTGTACATAGATGATATATCAGTA 57.099 33.333 19.73 13.90 40.64 2.74
7039 8784 8.399425 CAGTACCAAACATACTTGTGTTTTGTA 58.601 33.333 9.88 9.88 46.96 2.41
7042 8787 5.689961 CCAAACATACTTGTGTTTTGTAGCC 59.310 40.000 1.69 0.00 46.96 3.93
7044 8789 5.689383 ACATACTTGTGTTTTGTAGCCAG 57.311 39.130 0.00 0.00 33.85 4.85
7045 8790 5.130350 ACATACTTGTGTTTTGTAGCCAGT 58.870 37.500 0.00 0.00 33.85 4.00
7047 8792 6.096282 ACATACTTGTGTTTTGTAGCCAGTTT 59.904 34.615 0.00 0.00 33.85 2.66
7049 8794 4.705023 ACTTGTGTTTTGTAGCCAGTTTCT 59.295 37.500 0.00 0.00 0.00 2.52
7050 8795 5.185056 ACTTGTGTTTTGTAGCCAGTTTCTT 59.815 36.000 0.00 0.00 0.00 2.52
7054 8799 5.687285 GTGTTTTGTAGCCAGTTTCTTCATG 59.313 40.000 0.00 0.00 0.00 3.07
7056 8801 6.096141 TGTTTTGTAGCCAGTTTCTTCATGAA 59.904 34.615 8.12 8.12 0.00 2.57
7057 8802 5.947228 TTGTAGCCAGTTTCTTCATGAAG 57.053 39.130 26.56 26.56 39.71 3.02
7059 8804 5.809001 TGTAGCCAGTTTCTTCATGAAGAT 58.191 37.500 33.02 20.88 45.78 2.40
7060 8805 5.877012 TGTAGCCAGTTTCTTCATGAAGATC 59.123 40.000 33.02 27.06 45.78 2.75
7061 8806 5.176741 AGCCAGTTTCTTCATGAAGATCT 57.823 39.130 33.02 28.43 45.78 2.75
7062 8807 4.942483 AGCCAGTTTCTTCATGAAGATCTG 59.058 41.667 34.65 34.65 45.78 2.90
7066 8811 7.627298 CAGTTTCTTCATGAAGATCTGGATT 57.373 36.000 34.36 20.09 45.78 3.01
7067 8812 7.695820 CAGTTTCTTCATGAAGATCTGGATTC 58.304 38.462 34.36 22.13 45.78 2.52
7068 8813 7.553402 CAGTTTCTTCATGAAGATCTGGATTCT 59.447 37.037 34.36 23.22 45.78 2.40
7069 8814 7.553402 AGTTTCTTCATGAAGATCTGGATTCTG 59.447 37.037 33.02 7.47 45.78 3.02
7070 8815 5.926663 TCTTCATGAAGATCTGGATTCTGG 58.073 41.667 30.05 4.81 42.06 3.86
7071 8816 4.701651 TCATGAAGATCTGGATTCTGGG 57.298 45.455 0.00 0.00 0.00 4.45
7072 8817 4.301205 TCATGAAGATCTGGATTCTGGGA 58.699 43.478 0.00 0.00 0.00 4.37
7073 8818 4.912133 TCATGAAGATCTGGATTCTGGGAT 59.088 41.667 0.00 0.00 0.00 3.85
7074 8819 6.086775 TCATGAAGATCTGGATTCTGGGATA 58.913 40.000 0.00 0.00 0.00 2.59
7075 8820 6.212993 TCATGAAGATCTGGATTCTGGGATAG 59.787 42.308 0.00 0.00 0.00 2.08
7076 8821 5.471424 TGAAGATCTGGATTCTGGGATAGT 58.529 41.667 0.00 0.00 0.00 2.12
7077 8822 6.624297 TGAAGATCTGGATTCTGGGATAGTA 58.376 40.000 0.00 0.00 0.00 1.82
7078 8823 7.251936 TGAAGATCTGGATTCTGGGATAGTAT 58.748 38.462 0.00 0.00 0.00 2.12
7079 8824 7.179872 TGAAGATCTGGATTCTGGGATAGTATG 59.820 40.741 0.00 0.00 0.00 2.39
7080 8825 6.809428 AGATCTGGATTCTGGGATAGTATGA 58.191 40.000 0.00 0.00 0.00 2.15
7081 8826 7.251936 AGATCTGGATTCTGGGATAGTATGAA 58.748 38.462 0.00 0.00 0.00 2.57
7082 8827 6.672266 TCTGGATTCTGGGATAGTATGAAC 57.328 41.667 0.00 0.00 0.00 3.18
7083 8828 6.143206 TCTGGATTCTGGGATAGTATGAACA 58.857 40.000 0.00 0.00 0.00 3.18
7084 8829 6.789457 TCTGGATTCTGGGATAGTATGAACAT 59.211 38.462 0.00 0.00 0.00 2.71
7085 8830 7.293299 TCTGGATTCTGGGATAGTATGAACATT 59.707 37.037 0.00 0.00 0.00 2.71
7086 8831 7.226441 TGGATTCTGGGATAGTATGAACATTG 58.774 38.462 0.00 0.00 0.00 2.82
7087 8832 6.150140 GGATTCTGGGATAGTATGAACATTGC 59.850 42.308 0.00 0.00 0.00 3.56
7092 8837 6.524734 TGGGATAGTATGAACATTGCTAGTG 58.475 40.000 0.00 0.00 0.00 2.74
7117 8862 3.692690 TGTATGTTAAGGGTTGAAGGCC 58.307 45.455 0.00 0.00 0.00 5.19
7222 8967 1.765314 AGCAGGTAGGCGATGATTTCT 59.235 47.619 0.00 0.00 39.27 2.52
7339 9084 2.442643 TAGTAGAACCGGCCGGGG 60.443 66.667 44.99 24.22 41.60 5.73
7345 9090 3.335729 AACCGGCCGGGGATCTTT 61.336 61.111 44.99 27.75 41.60 2.52
7348 9093 4.875713 CGGCCGGGGATCTTTGGG 62.876 72.222 20.10 0.00 0.00 4.12
7448 9193 2.946947 AACGAATGTTCCTGGCTGG 58.053 52.632 3.65 3.65 30.83 4.85
7449 9194 0.110486 AACGAATGTTCCTGGCTGGT 59.890 50.000 10.44 0.00 30.83 4.00
7522 9267 1.535833 AGGGTACGCTCCTGATATCG 58.464 55.000 6.62 0.00 32.53 2.92
7524 9269 1.199558 GGGTACGCTCCTGATATCGTC 59.800 57.143 2.05 0.00 36.50 4.20
7545 9290 0.677098 AATGTCCAGAGCAGCTGCAG 60.677 55.000 38.24 26.33 43.50 4.41
7546 9291 1.839148 ATGTCCAGAGCAGCTGCAGT 61.839 55.000 38.24 23.13 43.50 4.40
7554 9299 1.811359 GAGCAGCTGCAGTTTCAGAAT 59.189 47.619 38.24 15.47 45.16 2.40
7556 9301 1.268899 GCAGCTGCAGTTTCAGAATGT 59.731 47.619 33.36 0.00 41.59 2.71
7557 9302 2.485426 GCAGCTGCAGTTTCAGAATGTA 59.515 45.455 33.36 0.00 41.59 2.29
7559 9304 4.333649 GCAGCTGCAGTTTCAGAATGTATA 59.666 41.667 33.36 0.00 41.59 1.47
7560 9305 5.163723 GCAGCTGCAGTTTCAGAATGTATAA 60.164 40.000 33.36 0.00 41.59 0.98
7561 9306 6.253746 CAGCTGCAGTTTCAGAATGTATAAC 58.746 40.000 16.64 0.00 36.19 1.89
7562 9307 5.355350 AGCTGCAGTTTCAGAATGTATAACC 59.645 40.000 16.64 0.00 36.19 2.85
7565 9310 7.012327 GCTGCAGTTTCAGAATGTATAACCATA 59.988 37.037 16.64 0.00 36.19 2.74
7567 9312 8.839343 TGCAGTTTCAGAATGTATAACCATATG 58.161 33.333 0.00 0.00 37.40 1.78
7568 9313 8.840321 GCAGTTTCAGAATGTATAACCATATGT 58.160 33.333 1.24 0.00 37.40 2.29
7576 9321 9.672673 AGAATGTATAACCATATGTAAGATGCC 57.327 33.333 1.24 0.00 0.00 4.40
7577 9322 9.672673 GAATGTATAACCATATGTAAGATGCCT 57.327 33.333 1.24 0.00 0.00 4.75
7578 9323 9.672673 AATGTATAACCATATGTAAGATGCCTC 57.327 33.333 1.24 0.00 0.00 4.70
7579 9324 8.435931 TGTATAACCATATGTAAGATGCCTCT 57.564 34.615 1.24 0.00 0.00 3.69
7580 9325 8.314021 TGTATAACCATATGTAAGATGCCTCTG 58.686 37.037 1.24 0.00 0.00 3.35
7581 9326 4.013267 ACCATATGTAAGATGCCTCTGC 57.987 45.455 1.24 0.00 38.26 4.26
7582 9327 3.244700 ACCATATGTAAGATGCCTCTGCC 60.245 47.826 1.24 0.00 36.33 4.85
7583 9328 3.244665 CCATATGTAAGATGCCTCTGCCA 60.245 47.826 1.24 0.00 36.33 4.92
7584 9329 4.392047 CATATGTAAGATGCCTCTGCCAA 58.608 43.478 0.00 0.00 36.33 4.52
7585 9330 2.113860 TGTAAGATGCCTCTGCCAAC 57.886 50.000 0.00 0.00 36.33 3.77
7586 9331 1.630369 TGTAAGATGCCTCTGCCAACT 59.370 47.619 0.00 0.00 36.33 3.16
7587 9332 2.837591 TGTAAGATGCCTCTGCCAACTA 59.162 45.455 0.00 0.00 36.33 2.24
7588 9333 3.263170 TGTAAGATGCCTCTGCCAACTAA 59.737 43.478 0.00 0.00 36.33 2.24
7589 9334 2.706339 AGATGCCTCTGCCAACTAAG 57.294 50.000 0.00 0.00 36.33 2.18
7590 9335 1.211457 AGATGCCTCTGCCAACTAAGG 59.789 52.381 0.00 0.00 36.33 2.69
7591 9336 0.257039 ATGCCTCTGCCAACTAAGGG 59.743 55.000 0.00 0.00 36.33 3.95
7592 9337 0.840288 TGCCTCTGCCAACTAAGGGA 60.840 55.000 0.00 0.00 36.33 4.20
7593 9338 0.393132 GCCTCTGCCAACTAAGGGAC 60.393 60.000 0.00 0.00 0.00 4.46
7594 9339 0.108138 CCTCTGCCAACTAAGGGACG 60.108 60.000 0.00 0.00 0.00 4.79
7595 9340 0.741221 CTCTGCCAACTAAGGGACGC 60.741 60.000 0.00 0.00 0.00 5.19
7596 9341 2.047655 TGCCAACTAAGGGACGCG 60.048 61.111 3.53 3.53 0.00 6.01
7597 9342 2.047560 GCCAACTAAGGGACGCGT 60.048 61.111 13.85 13.85 0.00 6.01
7598 9343 1.670083 GCCAACTAAGGGACGCGTT 60.670 57.895 15.53 0.00 0.00 4.84
7599 9344 1.908066 GCCAACTAAGGGACGCGTTG 61.908 60.000 15.53 4.50 37.18 4.10
7600 9345 2.159181 CAACTAAGGGACGCGTTGG 58.841 57.895 15.53 0.88 34.61 3.77
7601 9346 1.670083 AACTAAGGGACGCGTTGGC 60.670 57.895 15.53 0.00 0.00 4.52
7602 9347 2.047655 CTAAGGGACGCGTTGGCA 60.048 61.111 15.53 0.00 39.92 4.92
7603 9348 2.047655 TAAGGGACGCGTTGGCAG 60.048 61.111 15.53 0.00 39.92 4.85
7608 9353 4.465512 GACGCGTTGGCAGCCATG 62.466 66.667 17.09 12.55 39.92 3.66
7610 9355 4.170062 CGCGTTGGCAGCCATGAG 62.170 66.667 17.09 9.31 39.92 2.90
7611 9356 2.747460 GCGTTGGCAGCCATGAGA 60.747 61.111 17.09 0.00 39.62 3.27
7612 9357 2.117156 GCGTTGGCAGCCATGAGAT 61.117 57.895 17.09 0.00 39.62 2.75
7613 9358 1.725665 CGTTGGCAGCCATGAGATG 59.274 57.895 17.09 1.12 31.53 2.90
7614 9359 1.436336 GTTGGCAGCCATGAGATGC 59.564 57.895 17.09 13.82 39.25 3.91
7615 9360 1.000646 TTGGCAGCCATGAGATGCA 60.001 52.632 17.09 0.00 41.78 3.96
7619 9364 0.597637 GCAGCCATGAGATGCAATGC 60.598 55.000 16.32 0.00 39.75 3.56
7620 9365 0.744281 CAGCCATGAGATGCAATGCA 59.256 50.000 11.44 11.44 44.86 3.96
7640 9385 2.785868 GCGGTTGCATTCTGGATCT 58.214 52.632 0.00 0.00 42.15 2.75
7641 9386 0.659957 GCGGTTGCATTCTGGATCTC 59.340 55.000 0.00 0.00 42.15 2.75
7642 9387 1.745141 GCGGTTGCATTCTGGATCTCT 60.745 52.381 0.00 0.00 42.15 3.10
7647 9392 4.943705 GGTTGCATTCTGGATCTCTTAACA 59.056 41.667 0.00 0.00 0.00 2.41
7652 9397 6.372659 TGCATTCTGGATCTCTTAACAGTTTC 59.627 38.462 0.00 0.00 32.92 2.78
7653 9398 6.597280 GCATTCTGGATCTCTTAACAGTTTCT 59.403 38.462 0.00 0.00 32.92 2.52
7654 9399 7.201600 GCATTCTGGATCTCTTAACAGTTTCTC 60.202 40.741 0.00 0.00 32.92 2.87
7657 9402 6.208797 TCTGGATCTCTTAACAGTTTCTCGAA 59.791 38.462 0.00 0.00 32.92 3.71
7659 9404 7.386851 TGGATCTCTTAACAGTTTCTCGAAAT 58.613 34.615 0.00 0.00 32.36 2.17
7660 9405 7.331934 TGGATCTCTTAACAGTTTCTCGAAATG 59.668 37.037 0.00 0.00 32.36 2.32
7663 9408 7.851508 TCTCTTAACAGTTTCTCGAAATGTTG 58.148 34.615 10.71 11.62 35.62 3.33
7668 9413 6.233430 ACAGTTTCTCGAAATGTTGATCAG 57.767 37.500 0.00 0.00 32.36 2.90
7669 9414 5.991606 ACAGTTTCTCGAAATGTTGATCAGA 59.008 36.000 0.00 0.00 32.36 3.27
7672 9417 7.691463 CAGTTTCTCGAAATGTTGATCAGATTC 59.309 37.037 0.00 0.00 32.36 2.52
7675 9420 7.242914 TCTCGAAATGTTGATCAGATTCATG 57.757 36.000 0.00 0.00 0.00 3.07
7676 9421 7.043565 TCTCGAAATGTTGATCAGATTCATGA 58.956 34.615 0.00 0.00 0.00 3.07
7677 9422 7.550196 TCTCGAAATGTTGATCAGATTCATGAA 59.450 33.333 11.26 11.26 31.76 2.57
7679 9424 9.328845 TCGAAATGTTGATCAGATTCATGAATA 57.671 29.630 20.75 6.39 31.76 1.75
7680 9425 9.378597 CGAAATGTTGATCAGATTCATGAATAC 57.621 33.333 20.75 13.44 31.76 1.89
7684 9429 6.994496 TGTTGATCAGATTCATGAATACTCCC 59.006 38.462 20.75 8.30 31.76 4.30
7686 9431 7.002250 TGATCAGATTCATGAATACTCCCTC 57.998 40.000 20.75 12.74 31.76 4.30
7687 9432 6.786461 TGATCAGATTCATGAATACTCCCTCT 59.214 38.462 20.75 10.00 31.76 3.69
7688 9433 7.952368 TGATCAGATTCATGAATACTCCCTCTA 59.048 37.037 20.75 4.89 31.76 2.43
7689 9434 7.773489 TCAGATTCATGAATACTCCCTCTAG 57.227 40.000 20.75 8.05 0.00 2.43
7690 9435 7.530435 TCAGATTCATGAATACTCCCTCTAGA 58.470 38.462 20.75 9.87 0.00 2.43
7696 9441 8.609617 TCATGAATACTCCCTCTAGAAAGAAA 57.390 34.615 0.00 0.00 0.00 2.52
7697 9442 9.218525 TCATGAATACTCCCTCTAGAAAGAAAT 57.781 33.333 0.00 0.00 0.00 2.17
7739 9484 7.700022 ACTAAAGTAGTGATCTAAACGGTCT 57.300 36.000 0.00 0.00 37.69 3.85
7740 9485 8.120140 ACTAAAGTAGTGATCTAAACGGTCTT 57.880 34.615 0.00 0.00 37.69 3.01
7741 9486 9.236006 ACTAAAGTAGTGATCTAAACGGTCTTA 57.764 33.333 0.00 0.00 37.69 2.10
7777 9522 6.206634 CAGAGGGAGTAATGTTTACTTGCAAA 59.793 38.462 0.00 0.00 0.00 3.68
7779 9524 7.451566 AGAGGGAGTAATGTTTACTTGCAAATT 59.548 33.333 0.00 0.00 0.00 1.82
7780 9525 8.644374 AGGGAGTAATGTTTACTTGCAAATTA 57.356 30.769 0.00 0.00 0.00 1.40
7781 9526 9.084533 AGGGAGTAATGTTTACTTGCAAATTAA 57.915 29.630 0.00 0.00 0.00 1.40
7783 9528 8.860128 GGAGTAATGTTTACTTGCAAATTAAGC 58.140 33.333 0.00 4.18 0.00 3.09
7793 9538 4.032960 TGCAAATTAAGCAAGAGAGGGA 57.967 40.909 3.25 0.00 39.39 4.20
7797 9542 3.810310 ATTAAGCAAGAGAGGGAGTCG 57.190 47.619 0.00 0.00 0.00 4.18
7806 9688 3.502356 AGAGAGGGAGTCGAAAGAAACT 58.498 45.455 0.00 0.00 45.01 2.66
7808 9690 2.300437 AGAGGGAGTCGAAAGAAACTGG 59.700 50.000 0.00 0.00 45.01 4.00
7814 9696 3.214328 AGTCGAAAGAAACTGGCAATGT 58.786 40.909 0.00 0.00 45.01 2.71
7826 9708 1.795872 TGGCAATGTCTTACGTTCACG 59.204 47.619 0.00 0.00 46.33 4.35
7853 9735 2.257207 TCCTCTCCAACGACTCCAAAT 58.743 47.619 0.00 0.00 0.00 2.32
7898 9780 1.874019 CGCCATCCTGACGAACTCG 60.874 63.158 0.00 0.00 46.33 4.18
7907 9789 2.915659 ACGAACTCGGCCTGGTCA 60.916 61.111 0.00 0.00 44.95 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 1.304547 CCACGACAGGGAGAGAGGT 60.305 63.158 0.00 0.00 0.00 3.85
59 60 1.966451 GCTCCCAACCTGAACCACG 60.966 63.158 0.00 0.00 0.00 4.94
231 235 4.160439 TGTTTGACACTTTGCCCACAAATA 59.840 37.500 0.00 0.00 44.54 1.40
658 671 4.508128 AACGGACATCGCGCGGAT 62.508 61.111 31.69 18.84 43.89 4.18
822 837 2.378547 ACCATTCTTAGGCCAACTCCAA 59.621 45.455 5.01 0.00 0.00 3.53
880 895 0.458370 CACACGTCATCGGCTCATCA 60.458 55.000 0.00 0.00 41.85 3.07
1428 1458 3.648339 AACAAGGCAATGTGATGTGAC 57.352 42.857 0.00 0.00 32.81 3.67
1544 1579 2.450619 GAGCACGAACTCCTGCTTC 58.549 57.895 4.95 0.00 43.94 3.86
1565 1600 1.028868 GCTGCTTGCTTCCGAGGAAT 61.029 55.000 4.88 0.00 38.95 3.01
1586 1621 1.041447 ATTGCTGCTGGGATTGAGGC 61.041 55.000 0.00 0.00 0.00 4.70
1668 1706 1.209640 GCTGCTGCTCTTTGTGCTC 59.790 57.895 8.53 0.00 36.03 4.26
1754 1799 8.696043 AAGCTTAATTGATGTATAATCCTGCA 57.304 30.769 0.00 0.00 0.00 4.41
1761 1806 9.109393 GACCAGTGAAGCTTAATTGATGTATAA 57.891 33.333 7.88 0.00 0.00 0.98
1764 1809 6.371548 GTGACCAGTGAAGCTTAATTGATGTA 59.628 38.462 7.88 0.00 0.00 2.29
1798 1843 6.611236 CCCTACCAAATTCATGGGAAAATAGT 59.389 38.462 1.33 0.00 45.18 2.12
1801 1846 4.164030 GCCCTACCAAATTCATGGGAAAAT 59.836 41.667 0.00 0.00 45.18 1.82
1812 1859 3.525800 ACAAGACAGCCCTACCAAATT 57.474 42.857 0.00 0.00 0.00 1.82
1855 1902 1.942657 CATACAAGTTGAGGGCATCGG 59.057 52.381 10.54 0.00 0.00 4.18
1880 1927 4.518970 GTGTTGAGAATGGCCAAGAAGTAA 59.481 41.667 10.96 0.00 0.00 2.24
1900 1947 3.325753 GCTGGGGCAGAGGAGTGT 61.326 66.667 0.00 0.00 38.54 3.55
1952 1999 2.050144 ACAAGGATATGAGGCCGTGAT 58.950 47.619 0.00 0.00 37.16 3.06
2042 2090 6.569226 GCATCAAACCATTATACAGATCAGCC 60.569 42.308 0.00 0.00 0.00 4.85
2049 2097 5.149273 GCATCGCATCAAACCATTATACAG 58.851 41.667 0.00 0.00 0.00 2.74
2071 2119 4.641094 AGTATCTACAGGGTAGATATGCGC 59.359 45.833 22.14 0.00 38.39 6.09
2074 2122 8.561212 GCGAATAGTATCTACAGGGTAGATATG 58.439 40.741 22.14 12.72 38.39 1.78
2118 2166 5.050159 GCCTTTTTAAACATCTGCACCTTTG 60.050 40.000 0.00 0.00 0.00 2.77
2128 2176 5.461526 GTCAGACTGGCCTTTTTAAACATC 58.538 41.667 3.32 0.00 0.00 3.06
2399 2448 7.974504 AGTTTTACCTAACCTCAGAAATCTCA 58.025 34.615 0.00 0.00 0.00 3.27
2714 2763 3.434167 GCAGAGGGCAAAGATCTTGGATA 60.434 47.826 14.40 0.00 43.97 2.59
2787 2836 7.292356 ACCTGATGGAGATGGTACAACAATATA 59.708 37.037 0.00 0.00 38.60 0.86
2793 2842 3.914426 ACCTGATGGAGATGGTACAAC 57.086 47.619 0.00 0.00 38.60 3.32
3000 3050 8.191446 GGAGGATAGAAAAATAAAGCTTGTTCC 58.809 37.037 0.00 0.00 0.00 3.62
3002 3052 8.650143 TGGAGGATAGAAAAATAAAGCTTGTT 57.350 30.769 0.00 0.00 0.00 2.83
3014 3064 9.479549 AGAGCAAAATATTTGGAGGATAGAAAA 57.520 29.630 6.77 0.00 0.00 2.29
3135 3185 3.898517 AAACAAAGAGCTAAAGGACGC 57.101 42.857 0.00 0.00 0.00 5.19
3188 3238 4.778534 AGGCATCACAAAAATGAGACTG 57.221 40.909 0.00 0.00 30.46 3.51
3231 3282 5.886960 AGAAAGCTGCAACAAATAGTAGG 57.113 39.130 1.02 0.00 0.00 3.18
3315 3366 5.388654 AGTCCAACTCATCAACAAATCCTT 58.611 37.500 0.00 0.00 0.00 3.36
3613 3664 3.726607 ACTTCTGCTTCTCTGACAACTG 58.273 45.455 0.00 0.00 0.00 3.16
3730 3782 2.538449 ACGAACTTATTTATGGCGCTCG 59.462 45.455 7.64 6.54 0.00 5.03
3750 3802 4.004196 ACTACTCTGCTTGGTTGGTAAC 57.996 45.455 0.00 0.00 0.00 2.50
3766 3818 8.107095 TCCAAATATTTGCTACCAAGAACTACT 58.893 33.333 20.67 0.00 36.86 2.57
3767 3819 8.276252 TCCAAATATTTGCTACCAAGAACTAC 57.724 34.615 20.67 0.00 36.86 2.73
3838 3890 5.774690 TGAGTCCTGAATTGCAACCTTTAAT 59.225 36.000 0.00 0.00 0.00 1.40
4193 4256 6.791867 ATTGGTCTACTCATTACTGTAGCA 57.208 37.500 0.00 0.00 36.88 3.49
4202 4265 5.235534 AGGGGGAATATTGGTCTACTCATT 58.764 41.667 0.00 0.00 0.00 2.57
4203 4266 4.844348 AGGGGGAATATTGGTCTACTCAT 58.156 43.478 0.00 0.00 0.00 2.90
4204 4267 4.077982 AGAGGGGGAATATTGGTCTACTCA 60.078 45.833 0.00 0.00 0.00 3.41
4205 4268 4.494591 AGAGGGGGAATATTGGTCTACTC 58.505 47.826 0.00 0.00 0.00 2.59
4206 4269 4.578149 AGAGGGGGAATATTGGTCTACT 57.422 45.455 0.00 0.00 0.00 2.57
4207 4270 5.648330 AAAGAGGGGGAATATTGGTCTAC 57.352 43.478 0.00 0.00 0.00 2.59
4208 4271 5.633854 GCAAAAGAGGGGGAATATTGGTCTA 60.634 44.000 0.00 0.00 0.00 2.59
4209 4272 4.871822 CAAAAGAGGGGGAATATTGGTCT 58.128 43.478 0.00 0.00 0.00 3.85
4210 4273 3.384789 GCAAAAGAGGGGGAATATTGGTC 59.615 47.826 0.00 0.00 0.00 4.02
4211 4274 3.012844 AGCAAAAGAGGGGGAATATTGGT 59.987 43.478 0.00 0.00 0.00 3.67
4212 4275 3.646534 AGCAAAAGAGGGGGAATATTGG 58.353 45.455 0.00 0.00 0.00 3.16
4213 4276 6.790232 TTTAGCAAAAGAGGGGGAATATTG 57.210 37.500 0.00 0.00 0.00 1.90
4214 4277 7.806680 TTTTTAGCAAAAGAGGGGGAATATT 57.193 32.000 0.00 0.00 0.00 1.28
4369 4434 3.744426 GCGAACTAAACTGTGAGCCTTTA 59.256 43.478 0.00 0.00 0.00 1.85
4398 4463 9.377312 ACCGGGAAAACATTTGAAATATAATTG 57.623 29.630 6.32 0.00 0.00 2.32
4421 4486 3.370978 ACAGCTCAACGAATAATTCACCG 59.629 43.478 0.00 0.00 0.00 4.94
4428 4493 4.633175 TGTTACCACAGCTCAACGAATAA 58.367 39.130 0.00 0.00 0.00 1.40
4475 4540 2.476241 CTCGCAAAGCAAACCAAAATCC 59.524 45.455 0.00 0.00 0.00 3.01
4661 4726 0.396811 AGTTGAGCCCACTGGTACAC 59.603 55.000 0.00 0.00 0.00 2.90
4728 4797 6.393990 TGACAAATATTTTGGTGGGAAATCG 58.606 36.000 0.00 0.00 0.00 3.34
4744 4813 5.178623 GTGTGGACAACGAATCTGACAAATA 59.821 40.000 0.00 0.00 0.00 1.40
4747 4816 2.869801 GTGTGGACAACGAATCTGACAA 59.130 45.455 0.00 0.00 0.00 3.18
4749 4818 2.479837 TGTGTGGACAACGAATCTGAC 58.520 47.619 0.00 0.00 0.00 3.51
4775 4844 2.565841 GGTAATGGCAGAGGCAAGTAG 58.434 52.381 0.00 0.00 42.43 2.57
4776 4845 1.211949 GGGTAATGGCAGAGGCAAGTA 59.788 52.381 0.00 0.00 42.43 2.24
4777 4846 0.034089 GGGTAATGGCAGAGGCAAGT 60.034 55.000 0.00 0.00 42.43 3.16
4780 4849 1.207488 AGTGGGTAATGGCAGAGGCA 61.207 55.000 0.00 0.00 43.71 4.75
4794 4863 3.372025 CCCCTTCTCTTTATCCAAGTGGG 60.372 52.174 0.00 0.00 33.66 4.61
4839 4908 1.064505 CGGGCAGTAAATCACAGCATG 59.935 52.381 0.00 0.00 41.24 4.06
4909 4979 6.924060 CCAATGTATCCTCTAAGTCCTAAACG 59.076 42.308 0.00 0.00 0.00 3.60
4910 4980 7.217906 CCCAATGTATCCTCTAAGTCCTAAAC 58.782 42.308 0.00 0.00 0.00 2.01
4947 5018 4.018141 TGATGTCTGGAATTCCACCTTCAT 60.018 41.667 23.63 21.13 42.01 2.57
4992 5063 7.546250 AGGAACTGAATCTACAGAGAGAAAA 57.454 36.000 0.00 0.00 40.63 2.29
4993 5064 7.546250 AAGGAACTGAATCTACAGAGAGAAA 57.454 36.000 0.00 0.00 40.86 2.52
5068 5141 8.523523 TGTGAAATGAATGTCATTAAGCAAAG 57.476 30.769 4.00 0.00 45.57 2.77
5072 5145 8.470040 ACAATGTGAAATGAATGTCATTAAGC 57.530 30.769 4.00 0.00 45.57 3.09
5117 5190 6.719370 TCCAAGTACCTAAAAGATGTTTGCAT 59.281 34.615 0.00 0.00 38.18 3.96
5177 5250 5.627499 CAGCGTAAAATATGGTGGCATAT 57.373 39.130 0.00 0.00 39.01 1.78
5301 5374 9.384682 CAAATTGCAATCAAAACAAACTAATCC 57.615 29.630 13.38 0.00 35.56 3.01
5389 5463 5.751028 TGCCTGAAATGTTTTAAAAGTTCCG 59.249 36.000 0.00 2.92 0.00 4.30
5422 5496 6.820656 CAGACAGAAGCTTCCTAACAACATAT 59.179 38.462 22.81 0.00 0.00 1.78
5452 5526 5.934402 GGACCTTCCTAGTATCAAGTGAA 57.066 43.478 0.00 0.00 32.53 3.18
5496 5570 8.854117 GCCATTCTGGAAATTAACTGAGATAAT 58.146 33.333 0.00 0.00 40.96 1.28
5502 5576 5.394443 GCATGCCATTCTGGAAATTAACTGA 60.394 40.000 6.36 0.00 40.96 3.41
5534 5609 9.236006 ACAGTGAAGCAATCAATTAGATAAACT 57.764 29.630 0.00 0.00 40.50 2.66
5535 5610 9.846248 AACAGTGAAGCAATCAATTAGATAAAC 57.154 29.630 0.00 0.00 40.50 2.01
5537 5612 9.453572 AGAACAGTGAAGCAATCAATTAGATAA 57.546 29.630 0.00 0.00 40.50 1.75
5538 5613 8.886719 CAGAACAGTGAAGCAATCAATTAGATA 58.113 33.333 0.00 0.00 40.50 1.98
5550 5639 3.758755 AGACATCAGAACAGTGAAGCA 57.241 42.857 0.00 0.00 0.00 3.91
5565 5654 8.135382 TCAAAGACTAACCTTAGCTAAGACAT 57.865 34.615 30.92 19.11 35.33 3.06
5589 5682 6.710744 AGGAACCGGATGATAATATGTGTTTC 59.289 38.462 9.46 0.00 0.00 2.78
5600 5693 8.025270 TGTTATAAAAGAGGAACCGGATGATA 57.975 34.615 9.46 0.00 0.00 2.15
5610 5703 9.162764 GCAACTAGTCATGTTATAAAAGAGGAA 57.837 33.333 0.00 0.00 0.00 3.36
5624 5717 3.599343 TGTTAGCTGGCAACTAGTCATG 58.401 45.455 0.00 0.00 37.61 3.07
5636 5729 1.675641 GGTGGTGCCTGTTAGCTGG 60.676 63.158 0.00 0.00 36.86 4.85
5644 5737 0.396139 ATATTGCTGGGTGGTGCCTG 60.396 55.000 0.00 0.00 37.43 4.85
5718 5811 7.668492 AGTCGAAAGTAGTTGAGGTAAAGATT 58.332 34.615 0.00 0.00 0.00 2.40
5730 7096 5.634020 GTCATGTTGCTAGTCGAAAGTAGTT 59.366 40.000 0.00 0.00 31.94 2.24
5746 7113 4.487948 CTGCTTAAATGTGGGTCATGTTG 58.512 43.478 0.00 0.00 36.81 3.33
5772 7139 2.189499 GCCTCGGCCCTAGCAAATG 61.189 63.158 0.00 0.00 42.56 2.32
5773 7140 1.926426 AAGCCTCGGCCCTAGCAAAT 61.926 55.000 3.92 0.00 42.56 2.32
5777 7144 0.974383 TAATAAGCCTCGGCCCTAGC 59.026 55.000 3.92 0.00 43.17 3.42
5827 7478 6.525629 AGTCTTACATATTGCTAGCGGATTT 58.474 36.000 10.77 0.00 0.00 2.17
5832 7484 6.087522 GGACTAGTCTTACATATTGCTAGCG 58.912 44.000 21.88 0.00 31.77 4.26
5833 7485 6.982852 TGGACTAGTCTTACATATTGCTAGC 58.017 40.000 21.88 8.10 31.77 3.42
5856 7508 1.662876 CGCCGTGGAACATTGAAACTG 60.663 52.381 0.00 0.00 44.52 3.16
5871 7567 2.410638 TACGAAGAAGTGTGCGCCGT 62.411 55.000 4.18 6.35 0.00 5.68
5872 7568 1.279527 TTACGAAGAAGTGTGCGCCG 61.280 55.000 4.18 0.00 0.00 6.46
5876 7572 4.204370 GCTTTTTGTTACGAAGAAGTGTGC 59.796 41.667 0.00 0.00 0.00 4.57
5878 7574 5.554822 TGCTTTTTGTTACGAAGAAGTGT 57.445 34.783 0.00 0.00 0.00 3.55
5879 7575 6.358030 CAGATGCTTTTTGTTACGAAGAAGTG 59.642 38.462 0.00 0.00 0.00 3.16
5880 7576 6.430451 CAGATGCTTTTTGTTACGAAGAAGT 58.570 36.000 0.00 0.00 0.00 3.01
5886 7582 2.881513 TGGCAGATGCTTTTTGTTACGA 59.118 40.909 4.59 0.00 41.70 3.43
5888 7584 8.190784 AGTAATATGGCAGATGCTTTTTGTTAC 58.809 33.333 4.59 7.29 41.70 2.50
5918 7643 0.108377 TGCGTCGCATATTGACTGGT 60.108 50.000 17.58 0.00 31.71 4.00
5922 7647 0.301687 CACCTGCGTCGCATATTGAC 59.698 55.000 22.03 0.00 38.13 3.18
5925 7650 1.953559 AATCACCTGCGTCGCATATT 58.046 45.000 22.03 14.51 38.13 1.28
5931 7656 1.262950 TGTTGAAAATCACCTGCGTCG 59.737 47.619 0.00 0.00 0.00 5.12
5932 7657 2.350772 CCTGTTGAAAATCACCTGCGTC 60.351 50.000 0.00 0.00 0.00 5.19
5935 7664 2.229784 CCTCCTGTTGAAAATCACCTGC 59.770 50.000 0.00 0.00 0.00 4.85
5974 7703 6.396829 AGCTTTAGAAACACTGCAATCTTT 57.603 33.333 0.00 0.00 0.00 2.52
6051 7780 8.538409 ACCATTCAGAAAAGCAATTATGTTTC 57.462 30.769 0.00 0.00 0.00 2.78
6080 7809 7.619512 AACTAAGCATCCTAATAGTAGGCTT 57.380 36.000 11.50 12.97 45.99 4.35
6086 7815 5.758784 GCCGAAAACTAAGCATCCTAATAGT 59.241 40.000 0.00 0.00 0.00 2.12
6123 7852 7.898014 TCTTGAGGAAAGCATACTATCTGTA 57.102 36.000 0.00 0.00 35.69 2.74
6127 7856 5.119898 CGCATCTTGAGGAAAGCATACTATC 59.880 44.000 0.00 0.00 35.69 2.08
6129 7858 4.099419 TCGCATCTTGAGGAAAGCATACTA 59.901 41.667 0.00 0.00 35.69 1.82
6130 7859 3.118629 TCGCATCTTGAGGAAAGCATACT 60.119 43.478 0.00 0.00 35.69 2.12
6131 7860 3.001736 GTCGCATCTTGAGGAAAGCATAC 59.998 47.826 0.00 0.00 35.69 2.39
6133 7862 2.012673 GTCGCATCTTGAGGAAAGCAT 58.987 47.619 0.00 0.00 35.69 3.79
6134 7863 1.442769 GTCGCATCTTGAGGAAAGCA 58.557 50.000 0.00 0.00 35.69 3.91
6135 7864 0.371645 CGTCGCATCTTGAGGAAAGC 59.628 55.000 0.00 0.00 35.69 3.51
6136 7865 1.391485 CACGTCGCATCTTGAGGAAAG 59.609 52.381 0.00 0.00 37.22 2.62
6140 7869 2.456119 GGCACGTCGCATCTTGAGG 61.456 63.158 11.20 0.00 45.17 3.86
6143 7874 2.780643 CAGGCACGTCGCATCTTG 59.219 61.111 11.20 2.14 45.17 3.02
6149 7880 1.635663 AATGTTAGCAGGCACGTCGC 61.636 55.000 0.00 0.00 41.28 5.19
6153 7884 1.009829 GGAGAATGTTAGCAGGCACG 58.990 55.000 0.00 0.00 0.00 5.34
6154 7885 1.740025 GTGGAGAATGTTAGCAGGCAC 59.260 52.381 0.00 0.00 0.00 5.01
6158 7889 5.277683 GCACATATGTGGAGAATGTTAGCAG 60.278 44.000 31.63 6.21 45.72 4.24
6171 7902 2.092429 AGTTACCCCTGCACATATGTGG 60.092 50.000 31.63 19.81 45.72 4.17
6174 7907 3.879295 CTGAAGTTACCCCTGCACATATG 59.121 47.826 0.00 0.00 0.00 1.78
6182 7915 2.286365 TTTGCCTGAAGTTACCCCTG 57.714 50.000 0.00 0.00 0.00 4.45
6212 7948 2.586792 CCCTTTCTCTCGGGCAGG 59.413 66.667 0.00 0.00 32.83 4.85
6333 8069 7.884877 CCTTATCACAATGCTATCCCTTGATAA 59.115 37.037 0.00 0.00 34.74 1.75
6473 8209 3.316071 ACACAGAGTGAGCTCAAGATG 57.684 47.619 20.19 18.39 44.00 2.90
6474 8210 4.063689 CAAACACAGAGTGAGCTCAAGAT 58.936 43.478 20.19 7.59 44.00 2.40
6488 8224 2.529151 GTTCTGCACAACCAAACACAG 58.471 47.619 0.00 0.00 0.00 3.66
6553 8289 3.009115 CTCAGGAGGGCCCGGAAA 61.009 66.667 18.44 0.95 38.67 3.13
6614 8350 3.118038 TCCCTGAGTTGTTTAAGTGCAGT 60.118 43.478 0.00 0.00 0.00 4.40
6616 8352 3.211045 GTCCCTGAGTTGTTTAAGTGCA 58.789 45.455 0.00 0.00 0.00 4.57
6618 8354 3.815401 CCTGTCCCTGAGTTGTTTAAGTG 59.185 47.826 0.00 0.00 0.00 3.16
6622 8358 1.702957 CCCCTGTCCCTGAGTTGTTTA 59.297 52.381 0.00 0.00 0.00 2.01
6627 8363 1.128188 GTCACCCCTGTCCCTGAGTT 61.128 60.000 0.00 0.00 0.00 3.01
6629 8365 2.650116 CGTCACCCCTGTCCCTGAG 61.650 68.421 0.00 0.00 0.00 3.35
6630 8366 2.603473 CGTCACCCCTGTCCCTGA 60.603 66.667 0.00 0.00 0.00 3.86
6651 8390 0.250295 TGCTTCTTTGGACAGTCCCG 60.250 55.000 17.59 5.76 35.03 5.14
6655 8394 0.468226 TCGGTGCTTCTTTGGACAGT 59.532 50.000 0.00 0.00 0.00 3.55
6682 8427 0.460284 CCTGTAGCGATGACACCACC 60.460 60.000 0.00 0.00 0.00 4.61
6691 8436 0.393944 TCACGACCTCCTGTAGCGAT 60.394 55.000 0.00 0.00 0.00 4.58
6695 8440 0.034380 TCCCTCACGACCTCCTGTAG 60.034 60.000 0.00 0.00 0.00 2.74
6739 8484 5.805728 TCCCTTAGATCCTTGACAAACTTC 58.194 41.667 0.00 0.00 0.00 3.01
6844 8589 4.671590 TCGGACAGGAGGACGGCA 62.672 66.667 0.00 0.00 0.00 5.69
6856 8601 1.067582 CGGCAGGTATTCCTCGGAC 59.932 63.158 0.00 0.00 43.07 4.79
6900 8645 4.153411 GCCTAAACCCTAGATCTGAGCTA 58.847 47.826 5.18 2.31 0.00 3.32
6901 8646 2.969262 GCCTAAACCCTAGATCTGAGCT 59.031 50.000 5.18 0.00 0.00 4.09
6902 8647 2.288518 CGCCTAAACCCTAGATCTGAGC 60.289 54.545 5.18 0.00 0.00 4.26
6904 8649 3.223435 CTCGCCTAAACCCTAGATCTGA 58.777 50.000 5.18 0.00 0.00 3.27
6906 8651 1.964933 GCTCGCCTAAACCCTAGATCT 59.035 52.381 0.00 0.00 0.00 2.75
6908 8653 1.689273 CTGCTCGCCTAAACCCTAGAT 59.311 52.381 0.00 0.00 0.00 1.98
6909 8654 1.112113 CTGCTCGCCTAAACCCTAGA 58.888 55.000 0.00 0.00 0.00 2.43
6910 8655 0.530870 GCTGCTCGCCTAAACCCTAG 60.531 60.000 0.00 0.00 0.00 3.02
6911 8656 1.261938 TGCTGCTCGCCTAAACCCTA 61.262 55.000 0.00 0.00 38.05 3.53
6914 8659 1.502190 GTTGCTGCTCGCCTAAACC 59.498 57.895 0.00 0.00 38.05 3.27
6915 8660 1.234615 TGGTTGCTGCTCGCCTAAAC 61.235 55.000 0.00 0.00 38.05 2.01
6916 8661 0.955428 CTGGTTGCTGCTCGCCTAAA 60.955 55.000 0.00 0.00 38.05 1.85
6917 8662 1.375908 CTGGTTGCTGCTCGCCTAA 60.376 57.895 0.00 0.00 38.05 2.69
6918 8663 2.265739 CTGGTTGCTGCTCGCCTA 59.734 61.111 0.00 0.00 38.05 3.93
6919 8664 4.711949 CCTGGTTGCTGCTCGCCT 62.712 66.667 0.00 0.00 38.05 5.52
6922 8667 1.812922 CTAGCCTGGTTGCTGCTCG 60.813 63.158 0.00 0.00 42.77 5.03
6923 8668 1.451028 CCTAGCCTGGTTGCTGCTC 60.451 63.158 0.00 0.00 42.77 4.26
6924 8669 0.909610 TACCTAGCCTGGTTGCTGCT 60.910 55.000 0.00 0.00 42.77 4.24
6925 8670 0.744771 GTACCTAGCCTGGTTGCTGC 60.745 60.000 3.47 0.00 42.77 5.25
6926 8671 0.613260 TGTACCTAGCCTGGTTGCTG 59.387 55.000 3.47 0.00 42.77 4.41
6928 8673 0.739813 CGTGTACCTAGCCTGGTTGC 60.740 60.000 3.47 0.00 41.22 4.17
6929 8674 0.892755 TCGTGTACCTAGCCTGGTTG 59.107 55.000 3.47 0.00 41.22 3.77
6931 8676 1.636148 TTTCGTGTACCTAGCCTGGT 58.364 50.000 3.65 3.65 43.66 4.00
6932 8677 2.754946 TTTTCGTGTACCTAGCCTGG 57.245 50.000 0.00 0.00 0.00 4.45
6949 8694 5.008712 GCAAGCTAGTGGTACTGTTCTTTTT 59.991 40.000 0.00 0.00 0.00 1.94
6950 8695 4.515567 GCAAGCTAGTGGTACTGTTCTTTT 59.484 41.667 0.00 0.00 0.00 2.27
6952 8697 3.071023 TGCAAGCTAGTGGTACTGTTCTT 59.929 43.478 0.00 0.00 0.00 2.52
6954 8699 3.040147 TGCAAGCTAGTGGTACTGTTC 57.960 47.619 0.00 0.00 0.00 3.18
6955 8700 3.485463 TTGCAAGCTAGTGGTACTGTT 57.515 42.857 0.00 0.00 0.00 3.16
6956 8701 3.485463 TTTGCAAGCTAGTGGTACTGT 57.515 42.857 0.00 0.00 0.00 3.55
6957 8702 3.753272 ACATTTGCAAGCTAGTGGTACTG 59.247 43.478 0.00 0.00 0.00 2.74
6958 8703 4.021102 ACATTTGCAAGCTAGTGGTACT 57.979 40.909 0.00 0.00 0.00 2.73
6961 8706 4.588899 TGATACATTTGCAAGCTAGTGGT 58.411 39.130 0.00 0.00 0.00 4.16
6963 8708 5.583854 ACTCTGATACATTTGCAAGCTAGTG 59.416 40.000 0.00 0.00 0.00 2.74
6964 8709 5.583854 CACTCTGATACATTTGCAAGCTAGT 59.416 40.000 0.00 0.00 0.00 2.57
6965 8710 5.814188 TCACTCTGATACATTTGCAAGCTAG 59.186 40.000 0.00 0.00 0.00 3.42
6966 8711 5.582269 GTCACTCTGATACATTTGCAAGCTA 59.418 40.000 0.00 0.00 0.00 3.32
6967 8712 4.394300 GTCACTCTGATACATTTGCAAGCT 59.606 41.667 0.00 0.00 0.00 3.74
6968 8713 4.154737 TGTCACTCTGATACATTTGCAAGC 59.845 41.667 0.00 0.00 0.00 4.01
6969 8714 5.625251 GTGTCACTCTGATACATTTGCAAG 58.375 41.667 0.00 0.00 38.23 4.01
6971 8716 3.679502 CGTGTCACTCTGATACATTTGCA 59.320 43.478 0.65 0.00 38.23 4.08
6972 8717 3.062639 CCGTGTCACTCTGATACATTTGC 59.937 47.826 0.65 0.00 38.23 3.68
6973 8718 4.091945 CACCGTGTCACTCTGATACATTTG 59.908 45.833 0.65 0.00 38.23 2.32
6974 8719 4.245660 CACCGTGTCACTCTGATACATTT 58.754 43.478 0.65 0.00 38.23 2.32
6975 8720 3.258372 ACACCGTGTCACTCTGATACATT 59.742 43.478 0.00 0.00 38.23 2.71
6977 8722 2.235891 ACACCGTGTCACTCTGATACA 58.764 47.619 0.00 0.00 38.23 2.29
6978 8723 3.189910 TGTACACCGTGTCACTCTGATAC 59.810 47.826 7.63 0.00 35.50 2.24
6979 8724 3.414269 TGTACACCGTGTCACTCTGATA 58.586 45.455 7.63 0.00 0.00 2.15
6980 8725 2.235891 TGTACACCGTGTCACTCTGAT 58.764 47.619 7.63 0.00 0.00 2.90
6981 8726 1.682740 TGTACACCGTGTCACTCTGA 58.317 50.000 7.63 0.00 0.00 3.27
6982 8727 2.724977 ATGTACACCGTGTCACTCTG 57.275 50.000 7.63 0.00 0.00 3.35
6983 8728 3.682696 TCTATGTACACCGTGTCACTCT 58.317 45.455 7.63 1.26 0.00 3.24
6984 8729 4.095932 TCATCTATGTACACCGTGTCACTC 59.904 45.833 7.63 0.00 0.00 3.51
6985 8730 4.014406 TCATCTATGTACACCGTGTCACT 58.986 43.478 7.63 0.00 0.00 3.41
6986 8731 4.365899 TCATCTATGTACACCGTGTCAC 57.634 45.455 7.63 5.96 0.00 3.67
6987 8732 6.894339 ATATCATCTATGTACACCGTGTCA 57.106 37.500 7.63 6.83 0.00 3.58
6988 8733 8.674607 TGATATATCATCTATGTACACCGTGTC 58.325 37.037 11.49 0.98 0.00 3.67
6989 8734 8.575649 TGATATATCATCTATGTACACCGTGT 57.424 34.615 11.49 9.58 0.00 4.49
6990 8735 8.678199 ACTGATATATCATCTATGTACACCGTG 58.322 37.037 15.71 0.00 36.02 4.94
6991 8736 8.809468 ACTGATATATCATCTATGTACACCGT 57.191 34.615 15.71 3.16 36.02 4.83
7021 8766 5.592688 ACTGGCTACAAAACACAAGTATGTT 59.407 36.000 0.00 0.00 44.76 2.71
7028 8773 5.184096 TGAAGAAACTGGCTACAAAACACAA 59.816 36.000 0.00 0.00 0.00 3.33
7029 8774 4.702612 TGAAGAAACTGGCTACAAAACACA 59.297 37.500 0.00 0.00 0.00 3.72
7030 8775 5.243426 TGAAGAAACTGGCTACAAAACAC 57.757 39.130 0.00 0.00 0.00 3.32
7032 8777 6.072112 TCATGAAGAAACTGGCTACAAAAC 57.928 37.500 0.00 0.00 0.00 2.43
7049 8794 4.723285 TCCCAGAATCCAGATCTTCATGAA 59.277 41.667 8.12 8.12 0.00 2.57
7050 8795 4.301205 TCCCAGAATCCAGATCTTCATGA 58.699 43.478 0.00 0.00 0.00 3.07
7054 8799 7.398618 TCATACTATCCCAGAATCCAGATCTTC 59.601 40.741 0.00 0.00 0.00 2.87
7056 8801 6.809428 TCATACTATCCCAGAATCCAGATCT 58.191 40.000 0.00 0.00 0.00 2.75
7057 8802 7.038729 TGTTCATACTATCCCAGAATCCAGATC 60.039 40.741 0.00 0.00 0.00 2.75
7059 8804 6.143206 TGTTCATACTATCCCAGAATCCAGA 58.857 40.000 0.00 0.00 0.00 3.86
7060 8805 6.425210 TGTTCATACTATCCCAGAATCCAG 57.575 41.667 0.00 0.00 0.00 3.86
7061 8806 7.226441 CAATGTTCATACTATCCCAGAATCCA 58.774 38.462 0.00 0.00 0.00 3.41
7062 8807 6.150140 GCAATGTTCATACTATCCCAGAATCC 59.850 42.308 0.00 0.00 0.00 3.01
7063 8808 6.939163 AGCAATGTTCATACTATCCCAGAATC 59.061 38.462 0.00 0.00 0.00 2.52
7064 8809 6.845908 AGCAATGTTCATACTATCCCAGAAT 58.154 36.000 0.00 0.00 0.00 2.40
7065 8810 6.252599 AGCAATGTTCATACTATCCCAGAA 57.747 37.500 0.00 0.00 0.00 3.02
7066 8811 5.894298 AGCAATGTTCATACTATCCCAGA 57.106 39.130 0.00 0.00 0.00 3.86
7067 8812 6.648310 CACTAGCAATGTTCATACTATCCCAG 59.352 42.308 0.00 0.00 0.00 4.45
7068 8813 6.524734 CACTAGCAATGTTCATACTATCCCA 58.475 40.000 0.00 0.00 0.00 4.37
7069 8814 5.409826 GCACTAGCAATGTTCATACTATCCC 59.590 44.000 0.00 0.00 41.58 3.85
7070 8815 6.226787 AGCACTAGCAATGTTCATACTATCC 58.773 40.000 0.00 0.00 45.49 2.59
7071 8816 8.867935 CATAGCACTAGCAATGTTCATACTATC 58.132 37.037 0.00 0.00 45.49 2.08
7072 8817 8.370940 ACATAGCACTAGCAATGTTCATACTAT 58.629 33.333 0.00 0.00 45.49 2.12
7073 8818 7.726216 ACATAGCACTAGCAATGTTCATACTA 58.274 34.615 0.00 0.00 45.49 1.82
7074 8819 6.586344 ACATAGCACTAGCAATGTTCATACT 58.414 36.000 0.00 0.00 45.49 2.12
7075 8820 6.851222 ACATAGCACTAGCAATGTTCATAC 57.149 37.500 0.00 0.00 45.49 2.39
7076 8821 8.150296 ACATACATAGCACTAGCAATGTTCATA 58.850 33.333 5.50 0.00 45.49 2.15
7077 8822 6.994496 ACATACATAGCACTAGCAATGTTCAT 59.006 34.615 5.50 0.00 45.49 2.57
7078 8823 6.348498 ACATACATAGCACTAGCAATGTTCA 58.652 36.000 5.50 0.00 45.49 3.18
7079 8824 6.851222 ACATACATAGCACTAGCAATGTTC 57.149 37.500 5.50 0.00 45.49 3.18
7080 8825 8.731275 TTAACATACATAGCACTAGCAATGTT 57.269 30.769 13.93 13.93 45.49 2.71
7081 8826 7.442364 CCTTAACATACATAGCACTAGCAATGT 59.558 37.037 0.00 0.00 45.49 2.71
7082 8827 7.095060 CCCTTAACATACATAGCACTAGCAATG 60.095 40.741 0.00 0.00 45.49 2.82
7083 8828 6.936900 CCCTTAACATACATAGCACTAGCAAT 59.063 38.462 0.00 0.00 45.49 3.56
7084 8829 6.126883 ACCCTTAACATACATAGCACTAGCAA 60.127 38.462 0.00 0.00 45.49 3.91
7085 8830 5.365605 ACCCTTAACATACATAGCACTAGCA 59.634 40.000 0.00 0.00 45.49 3.49
7086 8831 5.855045 ACCCTTAACATACATAGCACTAGC 58.145 41.667 0.00 0.00 42.56 3.42
7087 8832 7.497595 TCAACCCTTAACATACATAGCACTAG 58.502 38.462 0.00 0.00 0.00 2.57
7092 8837 5.008712 GCCTTCAACCCTTAACATACATAGC 59.991 44.000 0.00 0.00 0.00 2.97
7117 8862 1.235724 GGTCCAAAACTGAAGTCCCG 58.764 55.000 0.00 0.00 0.00 5.14
7222 8967 3.196039 TCGATGTTAAATCGGAGGTGGAA 59.804 43.478 4.86 0.00 41.45 3.53
7339 9084 2.464459 CGGCGCAGTCCCAAAGATC 61.464 63.158 10.83 0.00 0.00 2.75
7348 9093 4.162690 ATCTTCCCCGGCGCAGTC 62.163 66.667 10.83 0.00 0.00 3.51
7448 9193 8.398665 CAACCATCTGAAGCTAAGGTTTATAAC 58.601 37.037 0.00 0.00 37.26 1.89
7449 9194 7.067008 GCAACCATCTGAAGCTAAGGTTTATAA 59.933 37.037 0.00 0.00 37.26 0.98
7507 9252 2.159327 TCGACGATATCAGGAGCGTA 57.841 50.000 3.12 0.00 37.07 4.42
7514 9259 4.471373 CTCTGGACATTCGACGATATCAG 58.529 47.826 0.00 3.44 0.00 2.90
7516 9261 3.238441 GCTCTGGACATTCGACGATATC 58.762 50.000 0.00 0.00 0.00 1.63
7522 9267 0.108424 AGCTGCTCTGGACATTCGAC 60.108 55.000 0.00 0.00 0.00 4.20
7524 9269 1.703438 GCAGCTGCTCTGGACATTCG 61.703 60.000 31.33 0.00 43.06 3.34
7554 9299 8.314021 CAGAGGCATCTTACATATGGTTATACA 58.686 37.037 7.80 0.00 31.64 2.29
7556 9301 7.331026 GCAGAGGCATCTTACATATGGTTATA 58.669 38.462 7.80 0.00 40.72 0.98
7557 9302 6.176183 GCAGAGGCATCTTACATATGGTTAT 58.824 40.000 7.80 0.00 40.72 1.89
7559 9304 4.392940 GCAGAGGCATCTTACATATGGTT 58.607 43.478 7.80 0.00 40.72 3.67
7560 9305 3.244700 GGCAGAGGCATCTTACATATGGT 60.245 47.826 7.80 0.00 43.71 3.55
7561 9306 3.244665 TGGCAGAGGCATCTTACATATGG 60.245 47.826 7.80 0.00 43.71 2.74
7562 9307 4.011966 TGGCAGAGGCATCTTACATATG 57.988 45.455 0.00 0.00 43.71 1.78
7565 9310 2.240667 AGTTGGCAGAGGCATCTTACAT 59.759 45.455 0.00 0.00 43.71 2.29
7567 9312 2.409948 AGTTGGCAGAGGCATCTTAC 57.590 50.000 0.00 0.00 43.71 2.34
7568 9313 3.118261 CCTTAGTTGGCAGAGGCATCTTA 60.118 47.826 0.00 0.98 43.71 2.10
7569 9314 2.356535 CCTTAGTTGGCAGAGGCATCTT 60.357 50.000 0.00 0.00 43.71 2.40
7570 9315 1.211457 CCTTAGTTGGCAGAGGCATCT 59.789 52.381 0.00 0.00 43.71 2.90
7571 9316 1.673168 CCTTAGTTGGCAGAGGCATC 58.327 55.000 0.00 0.00 43.71 3.91
7573 9318 0.840288 TCCCTTAGTTGGCAGAGGCA 60.840 55.000 0.00 0.00 43.71 4.75
7575 9320 0.108138 CGTCCCTTAGTTGGCAGAGG 60.108 60.000 0.00 0.00 0.00 3.69
7576 9321 0.741221 GCGTCCCTTAGTTGGCAGAG 60.741 60.000 0.00 0.00 0.00 3.35
7577 9322 1.295423 GCGTCCCTTAGTTGGCAGA 59.705 57.895 0.00 0.00 0.00 4.26
7578 9323 2.100631 CGCGTCCCTTAGTTGGCAG 61.101 63.158 0.00 0.00 0.00 4.85
7579 9324 2.047655 CGCGTCCCTTAGTTGGCA 60.048 61.111 0.00 0.00 0.00 4.92
7580 9325 1.670083 AACGCGTCCCTTAGTTGGC 60.670 57.895 14.44 0.00 0.00 4.52
7581 9326 2.159181 CAACGCGTCCCTTAGTTGG 58.841 57.895 14.44 0.00 39.95 3.77
7582 9327 1.908066 GCCAACGCGTCCCTTAGTTG 61.908 60.000 14.44 3.90 42.37 3.16
7583 9328 1.670083 GCCAACGCGTCCCTTAGTT 60.670 57.895 14.44 0.00 0.00 2.24
7584 9329 2.047560 GCCAACGCGTCCCTTAGT 60.048 61.111 14.44 0.00 0.00 2.24
7585 9330 2.047655 TGCCAACGCGTCCCTTAG 60.048 61.111 14.44 0.00 38.08 2.18
7586 9331 2.047655 CTGCCAACGCGTCCCTTA 60.048 61.111 14.44 0.00 38.08 2.69
7591 9336 4.465512 CATGGCTGCCAACGCGTC 62.466 66.667 27.24 0.00 36.95 5.19
7593 9338 4.170062 CTCATGGCTGCCAACGCG 62.170 66.667 27.24 14.32 36.95 6.01
7594 9339 2.117156 ATCTCATGGCTGCCAACGC 61.117 57.895 27.24 0.00 36.95 4.84
7595 9340 1.725665 CATCTCATGGCTGCCAACG 59.274 57.895 27.24 19.51 36.95 4.10
7596 9341 1.317431 TGCATCTCATGGCTGCCAAC 61.317 55.000 27.24 9.58 36.95 3.77
7597 9342 0.612453 TTGCATCTCATGGCTGCCAA 60.612 50.000 27.24 9.67 36.95 4.52
7598 9343 0.396556 ATTGCATCTCATGGCTGCCA 60.397 50.000 25.65 25.65 38.19 4.92
7599 9344 0.032130 CATTGCATCTCATGGCTGCC 59.968 55.000 12.87 12.87 35.02 4.85
7600 9345 0.597637 GCATTGCATCTCATGGCTGC 60.598 55.000 3.15 7.76 36.45 5.25
7601 9346 0.744281 TGCATTGCATCTCATGGCTG 59.256 50.000 7.38 0.00 31.71 4.85
7602 9347 3.200918 TGCATTGCATCTCATGGCT 57.799 47.368 7.38 0.00 31.71 4.75
7623 9368 2.322355 AGAGATCCAGAATGCAACCG 57.678 50.000 0.00 0.00 31.97 4.44
7635 9380 7.332182 ACATTTCGAGAAACTGTTAAGAGATCC 59.668 37.037 6.63 0.00 32.51 3.36
7638 9383 7.709182 TCAACATTTCGAGAAACTGTTAAGAGA 59.291 33.333 6.63 11.98 34.02 3.10
7639 9384 7.851508 TCAACATTTCGAGAAACTGTTAAGAG 58.148 34.615 17.37 0.00 34.02 2.85
7640 9385 7.780008 TCAACATTTCGAGAAACTGTTAAGA 57.220 32.000 17.37 12.59 34.02 2.10
7641 9386 8.282592 TGATCAACATTTCGAGAAACTGTTAAG 58.717 33.333 17.37 11.34 34.02 1.85
7642 9387 8.148807 TGATCAACATTTCGAGAAACTGTTAA 57.851 30.769 17.37 10.15 34.02 2.01
7647 9392 7.388776 TGAATCTGATCAACATTTCGAGAAACT 59.611 33.333 0.00 0.00 32.51 2.66
7652 9397 7.242914 TCATGAATCTGATCAACATTTCGAG 57.757 36.000 0.00 0.00 32.06 4.04
7653 9398 7.614124 TTCATGAATCTGATCAACATTTCGA 57.386 32.000 3.38 0.00 32.06 3.71
7654 9399 9.378597 GTATTCATGAATCTGATCAACATTTCG 57.621 33.333 23.95 0.00 32.06 3.46
7657 9402 9.064706 GGAGTATTCATGAATCTGATCAACATT 57.935 33.333 23.95 0.70 32.06 2.71
7659 9404 6.994496 GGGAGTATTCATGAATCTGATCAACA 59.006 38.462 23.95 0.90 32.06 3.33
7660 9405 7.222872 AGGGAGTATTCATGAATCTGATCAAC 58.777 38.462 23.95 14.44 32.06 3.18
7663 9408 7.243604 AGAGGGAGTATTCATGAATCTGATC 57.756 40.000 23.95 16.13 32.50 2.92
7668 9413 8.865090 TCTTTCTAGAGGGAGTATTCATGAATC 58.135 37.037 23.95 15.14 32.50 2.52
7669 9414 8.789767 TCTTTCTAGAGGGAGTATTCATGAAT 57.210 34.615 23.75 23.75 34.93 2.57
7715 9460 7.700022 AGACCGTTTAGATCACTACTTTAGT 57.300 36.000 0.00 0.00 40.28 2.24
7746 9491 9.856162 AAGTAAACATTACTCCCTCTGTAAAAA 57.144 29.630 3.44 0.00 34.20 1.94
7747 9492 9.280174 CAAGTAAACATTACTCCCTCTGTAAAA 57.720 33.333 3.44 0.00 34.20 1.52
7748 9493 7.389607 GCAAGTAAACATTACTCCCTCTGTAAA 59.610 37.037 3.44 0.00 34.20 2.01
7749 9494 6.877322 GCAAGTAAACATTACTCCCTCTGTAA 59.123 38.462 3.44 0.00 34.87 2.41
7750 9495 6.014070 TGCAAGTAAACATTACTCCCTCTGTA 60.014 38.462 3.44 0.00 0.00 2.74
7751 9496 5.221843 TGCAAGTAAACATTACTCCCTCTGT 60.222 40.000 3.44 0.00 0.00 3.41
7752 9497 5.245531 TGCAAGTAAACATTACTCCCTCTG 58.754 41.667 3.44 0.24 0.00 3.35
7753 9498 5.499004 TGCAAGTAAACATTACTCCCTCT 57.501 39.130 3.44 0.00 0.00 3.69
7754 9499 6.569179 TTTGCAAGTAAACATTACTCCCTC 57.431 37.500 0.00 0.00 0.00 4.30
7755 9500 7.539034 AATTTGCAAGTAAACATTACTCCCT 57.461 32.000 0.00 0.00 0.00 4.20
7756 9501 9.353999 CTTAATTTGCAAGTAAACATTACTCCC 57.646 33.333 0.00 0.00 0.00 4.30
7757 9502 8.860128 GCTTAATTTGCAAGTAAACATTACTCC 58.140 33.333 0.00 0.19 0.00 3.85
7758 9503 9.405587 TGCTTAATTTGCAAGTAAACATTACTC 57.594 29.630 0.00 0.00 37.51 2.59
7771 9516 4.406456 TCCCTCTCTTGCTTAATTTGCAA 58.594 39.130 14.81 14.81 46.48 4.08
7777 9522 3.366396 TCGACTCCCTCTCTTGCTTAAT 58.634 45.455 0.00 0.00 0.00 1.40
7779 9524 2.509166 TCGACTCCCTCTCTTGCTTA 57.491 50.000 0.00 0.00 0.00 3.09
7780 9525 1.633774 TTCGACTCCCTCTCTTGCTT 58.366 50.000 0.00 0.00 0.00 3.91
7781 9526 1.548269 CTTTCGACTCCCTCTCTTGCT 59.452 52.381 0.00 0.00 0.00 3.91
7783 9528 3.944055 TTCTTTCGACTCCCTCTCTTG 57.056 47.619 0.00 0.00 0.00 3.02
7786 9531 3.580731 CAGTTTCTTTCGACTCCCTCTC 58.419 50.000 0.00 0.00 0.00 3.20
7787 9532 2.300437 CCAGTTTCTTTCGACTCCCTCT 59.700 50.000 0.00 0.00 0.00 3.69
7788 9533 2.689646 CCAGTTTCTTTCGACTCCCTC 58.310 52.381 0.00 0.00 0.00 4.30
7790 9535 1.157585 GCCAGTTTCTTTCGACTCCC 58.842 55.000 0.00 0.00 0.00 4.30
7791 9536 1.878953 TGCCAGTTTCTTTCGACTCC 58.121 50.000 0.00 0.00 0.00 3.85
7793 9538 3.214328 ACATTGCCAGTTTCTTTCGACT 58.786 40.909 0.00 0.00 0.00 4.18
7797 9542 5.147162 CGTAAGACATTGCCAGTTTCTTTC 58.853 41.667 0.00 0.00 43.02 2.62
7806 9688 1.795872 CGTGAACGTAAGACATTGCCA 59.204 47.619 0.00 0.00 43.62 4.92
7808 9690 2.092211 CCTCGTGAACGTAAGACATTGC 59.908 50.000 2.37 0.00 43.62 3.56
7814 9696 2.163010 GGATGACCTCGTGAACGTAAGA 59.837 50.000 2.37 0.00 43.62 2.10
7841 9723 1.686355 TTGTGCCATTTGGAGTCGTT 58.314 45.000 0.00 0.00 37.39 3.85
7853 9735 2.902419 CGACGCCACAATTGTGCCA 61.902 57.895 29.42 0.00 44.34 4.92
7859 9741 1.574428 GCAGTTCGACGCCACAATT 59.426 52.632 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.