Multiple sequence alignment - TraesCS6D01G357500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G357500 chr6D 100.000 2964 0 0 1 2964 451081201 451084164 0.000000e+00 5474.0
1 TraesCS6D01G357500 chr6A 87.819 2389 171 52 615 2964 596739398 596741705 0.000000e+00 2689.0
2 TraesCS6D01G357500 chr6B 84.932 1460 106 52 556 1930 685016569 685017999 0.000000e+00 1373.0
3 TraesCS6D01G357500 chr3A 81.048 248 41 4 114 360 16351349 16351591 3.010000e-45 193.0
4 TraesCS6D01G357500 chr7B 79.126 206 39 4 2474 2676 64117476 64117680 3.980000e-29 139.0
5 TraesCS6D01G357500 chr7D 78.155 206 29 11 2474 2676 105491543 105491735 1.870000e-22 117.0
6 TraesCS6D01G357500 chr7D 100.000 30 0 0 427 456 3300036 3300007 4.130000e-04 56.5
7 TraesCS6D01G357500 chr7D 82.540 63 11 0 427 489 3301342 3301280 4.130000e-04 56.5
8 TraesCS6D01G357500 chr7D 82.540 63 11 0 427 489 3303288 3303226 4.130000e-04 56.5
9 TraesCS6D01G357500 chr7D 82.540 63 11 0 427 489 3307179 3307117 4.130000e-04 56.5
10 TraesCS6D01G357500 chr7D 82.540 63 11 0 427 489 3314320 3314258 4.130000e-04 56.5
11 TraesCS6D01G357500 chrUn 82.540 63 11 0 427 489 375503942 375503880 4.130000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G357500 chr6D 451081201 451084164 2963 False 5474 5474 100.000 1 2964 1 chr6D.!!$F1 2963
1 TraesCS6D01G357500 chr6A 596739398 596741705 2307 False 2689 2689 87.819 615 2964 1 chr6A.!!$F1 2349
2 TraesCS6D01G357500 chr6B 685016569 685017999 1430 False 1373 1373 84.932 556 1930 1 chr6B.!!$F1 1374

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
428 429 0.030908 GTGAAGGGCCTCGACGATAG 59.969 60.0 6.46 0.0 46.19 2.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2288 2388 0.096281 CACAAGTCGCAACACAACGT 59.904 50.0 0.0 0.0 0.0 3.99 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.739667 CATCAGTGCATGGCATGGG 59.260 57.895 27.48 4.98 41.91 4.00
22 23 2.131709 ATCAGTGCATGGCATGGGC 61.132 57.895 27.48 15.56 41.91 5.36
23 24 2.864770 ATCAGTGCATGGCATGGGCA 62.865 55.000 27.48 18.03 41.91 5.36
24 25 2.284039 AGTGCATGGCATGGGCAA 60.284 55.556 27.48 4.08 41.91 4.52
25 26 2.125431 GTGCATGGCATGGGCAAC 60.125 61.111 27.48 11.82 41.91 4.17
38 39 3.670377 GCAACCAGCACCCGGAAC 61.670 66.667 0.73 0.00 44.79 3.62
39 40 2.983592 CAACCAGCACCCGGAACC 60.984 66.667 0.73 0.00 0.00 3.62
40 41 4.636435 AACCAGCACCCGGAACCG 62.636 66.667 0.73 6.25 39.44 4.44
50 51 3.702048 CGGAACCGGGAAGGAGCA 61.702 66.667 6.32 0.00 45.00 4.26
51 52 2.269241 GGAACCGGGAAGGAGCAG 59.731 66.667 6.32 0.00 45.00 4.24
52 53 2.291043 GGAACCGGGAAGGAGCAGA 61.291 63.158 6.32 0.00 45.00 4.26
53 54 1.219393 GAACCGGGAAGGAGCAGAG 59.781 63.158 6.32 0.00 45.00 3.35
54 55 1.536662 AACCGGGAAGGAGCAGAGT 60.537 57.895 6.32 0.00 45.00 3.24
55 56 0.252103 AACCGGGAAGGAGCAGAGTA 60.252 55.000 6.32 0.00 45.00 2.59
56 57 0.684805 ACCGGGAAGGAGCAGAGTAG 60.685 60.000 6.32 0.00 45.00 2.57
57 58 1.439644 CGGGAAGGAGCAGAGTAGC 59.560 63.158 0.00 0.00 0.00 3.58
58 59 1.323271 CGGGAAGGAGCAGAGTAGCA 61.323 60.000 0.00 0.00 36.85 3.49
59 60 0.463620 GGGAAGGAGCAGAGTAGCAG 59.536 60.000 0.00 0.00 36.85 4.24
60 61 0.179086 GGAAGGAGCAGAGTAGCAGC 60.179 60.000 0.00 0.00 36.85 5.25
61 62 0.527385 GAAGGAGCAGAGTAGCAGCG 60.527 60.000 0.00 0.00 36.85 5.18
62 63 1.954362 AAGGAGCAGAGTAGCAGCGG 61.954 60.000 0.00 0.00 36.85 5.52
63 64 2.716017 GGAGCAGAGTAGCAGCGGT 61.716 63.158 0.00 0.00 36.85 5.68
64 65 1.226831 GAGCAGAGTAGCAGCGGTC 60.227 63.158 0.00 0.00 36.85 4.79
65 66 1.662438 GAGCAGAGTAGCAGCGGTCT 61.662 60.000 0.00 0.00 36.85 3.85
66 67 1.518133 GCAGAGTAGCAGCGGTCTG 60.518 63.158 14.30 14.30 43.16 3.51
67 68 1.886585 CAGAGTAGCAGCGGTCTGT 59.113 57.895 11.60 0.00 42.29 3.41
68 69 0.244994 CAGAGTAGCAGCGGTCTGTT 59.755 55.000 11.60 0.00 42.29 3.16
69 70 0.528470 AGAGTAGCAGCGGTCTGTTC 59.472 55.000 0.00 0.00 42.29 3.18
70 71 0.798771 GAGTAGCAGCGGTCTGTTCG 60.799 60.000 0.00 0.00 42.29 3.95
76 77 3.554692 GCGGTCTGTTCGCCATCG 61.555 66.667 0.00 0.00 46.55 3.84
77 78 2.180769 CGGTCTGTTCGCCATCGA 59.819 61.111 0.00 0.00 43.89 3.59
78 79 2.158959 CGGTCTGTTCGCCATCGAC 61.159 63.158 0.00 0.00 45.43 4.20
79 80 1.080093 GGTCTGTTCGCCATCGACA 60.080 57.895 0.00 0.00 45.43 4.35
80 81 1.078759 GGTCTGTTCGCCATCGACAG 61.079 60.000 0.00 0.00 45.43 3.51
81 82 1.078759 GTCTGTTCGCCATCGACAGG 61.079 60.000 1.40 1.40 45.43 4.00
82 83 1.215382 CTGTTCGCCATCGACAGGA 59.785 57.895 9.80 0.00 45.43 3.86
83 84 0.803768 CTGTTCGCCATCGACAGGAG 60.804 60.000 9.80 6.53 45.43 3.69
84 85 1.248101 TGTTCGCCATCGACAGGAGA 61.248 55.000 9.80 8.79 45.43 3.71
85 86 0.802607 GTTCGCCATCGACAGGAGAC 60.803 60.000 10.96 4.65 45.43 3.36
86 87 2.266376 TTCGCCATCGACAGGAGACG 62.266 60.000 10.96 5.13 45.43 4.18
87 88 2.583593 GCCATCGACAGGAGACGC 60.584 66.667 9.80 0.00 33.03 5.19
88 89 2.105128 CCATCGACAGGAGACGCC 59.895 66.667 0.00 0.00 33.03 5.68
89 90 2.105128 CATCGACAGGAGACGCCC 59.895 66.667 0.00 0.00 37.37 6.13
90 91 2.362503 ATCGACAGGAGACGCCCA 60.363 61.111 0.00 0.00 37.37 5.36
91 92 2.711922 ATCGACAGGAGACGCCCAC 61.712 63.158 0.00 0.00 37.37 4.61
92 93 4.436998 CGACAGGAGACGCCCACC 62.437 72.222 0.00 0.00 37.37 4.61
93 94 4.436998 GACAGGAGACGCCCACCG 62.437 72.222 0.00 0.00 44.21 4.94
110 111 4.115199 GCCACAGGCCAGTAGGGG 62.115 72.222 5.01 3.03 44.06 4.79
121 122 3.382083 CCAGTAGGGGCTAATTTTGGT 57.618 47.619 0.00 0.00 0.00 3.67
122 123 3.023832 CCAGTAGGGGCTAATTTTGGTG 58.976 50.000 0.00 0.00 0.00 4.17
123 124 3.563479 CCAGTAGGGGCTAATTTTGGTGT 60.563 47.826 0.00 0.00 0.00 4.16
124 125 4.086457 CAGTAGGGGCTAATTTTGGTGTT 58.914 43.478 0.00 0.00 0.00 3.32
125 126 4.526650 CAGTAGGGGCTAATTTTGGTGTTT 59.473 41.667 0.00 0.00 0.00 2.83
126 127 4.770531 AGTAGGGGCTAATTTTGGTGTTTC 59.229 41.667 0.00 0.00 0.00 2.78
127 128 2.560981 AGGGGCTAATTTTGGTGTTTCG 59.439 45.455 0.00 0.00 0.00 3.46
128 129 2.559231 GGGGCTAATTTTGGTGTTTCGA 59.441 45.455 0.00 0.00 0.00 3.71
129 130 3.571571 GGGCTAATTTTGGTGTTTCGAC 58.428 45.455 0.00 0.00 0.00 4.20
130 131 3.571571 GGCTAATTTTGGTGTTTCGACC 58.428 45.455 0.00 0.00 36.43 4.79
131 132 3.571571 GCTAATTTTGGTGTTTCGACCC 58.428 45.455 0.00 0.00 34.79 4.46
132 133 3.004944 GCTAATTTTGGTGTTTCGACCCA 59.995 43.478 0.00 0.00 34.79 4.51
133 134 4.321675 GCTAATTTTGGTGTTTCGACCCAT 60.322 41.667 0.00 0.00 34.79 4.00
134 135 4.681074 AATTTTGGTGTTTCGACCCATT 57.319 36.364 0.00 0.00 34.79 3.16
135 136 5.793030 AATTTTGGTGTTTCGACCCATTA 57.207 34.783 0.00 0.00 34.79 1.90
136 137 4.839668 TTTTGGTGTTTCGACCCATTAG 57.160 40.909 0.00 0.00 34.79 1.73
137 138 1.816074 TGGTGTTTCGACCCATTAGC 58.184 50.000 0.00 0.00 34.79 3.09
138 139 0.725117 GGTGTTTCGACCCATTAGCG 59.275 55.000 0.00 0.00 0.00 4.26
139 140 1.673626 GGTGTTTCGACCCATTAGCGA 60.674 52.381 0.00 0.00 0.00 4.93
140 141 2.070783 GTGTTTCGACCCATTAGCGAA 58.929 47.619 0.00 0.00 41.62 4.70
143 144 2.754946 TTCGACCCATTAGCGAAAGT 57.245 45.000 0.00 0.00 40.56 2.66
144 145 2.754946 TCGACCCATTAGCGAAAGTT 57.245 45.000 0.00 0.00 0.00 2.66
145 146 2.343101 TCGACCCATTAGCGAAAGTTG 58.657 47.619 0.00 0.00 0.00 3.16
146 147 2.028839 TCGACCCATTAGCGAAAGTTGA 60.029 45.455 0.00 0.00 0.00 3.18
147 148 2.348666 CGACCCATTAGCGAAAGTTGAG 59.651 50.000 0.00 0.00 0.00 3.02
148 149 2.084546 ACCCATTAGCGAAAGTTGAGC 58.915 47.619 0.00 0.00 0.00 4.26
149 150 1.401905 CCCATTAGCGAAAGTTGAGCC 59.598 52.381 0.00 0.00 0.00 4.70
150 151 2.083774 CCATTAGCGAAAGTTGAGCCA 58.916 47.619 0.00 0.00 0.00 4.75
151 152 2.096496 CCATTAGCGAAAGTTGAGCCAG 59.904 50.000 0.00 0.00 0.00 4.85
152 153 2.831685 TTAGCGAAAGTTGAGCCAGA 57.168 45.000 0.00 0.00 0.00 3.86
153 154 3.334583 TTAGCGAAAGTTGAGCCAGAT 57.665 42.857 0.00 0.00 0.00 2.90
154 155 1.731720 AGCGAAAGTTGAGCCAGATC 58.268 50.000 0.00 0.00 0.00 2.75
155 156 0.729690 GCGAAAGTTGAGCCAGATCC 59.270 55.000 0.00 0.00 0.00 3.36
156 157 1.002366 CGAAAGTTGAGCCAGATCCG 58.998 55.000 0.00 0.00 0.00 4.18
157 158 1.404181 CGAAAGTTGAGCCAGATCCGA 60.404 52.381 0.00 0.00 0.00 4.55
158 159 2.003301 GAAAGTTGAGCCAGATCCGAC 58.997 52.381 0.00 0.00 0.00 4.79
159 160 0.250513 AAGTTGAGCCAGATCCGACC 59.749 55.000 0.00 0.00 0.00 4.79
160 161 1.153349 GTTGAGCCAGATCCGACCC 60.153 63.158 0.00 0.00 0.00 4.46
161 162 1.306141 TTGAGCCAGATCCGACCCT 60.306 57.895 0.00 0.00 0.00 4.34
162 163 1.617018 TTGAGCCAGATCCGACCCTG 61.617 60.000 0.00 0.00 0.00 4.45
166 167 4.686695 CAGATCCGACCCTGGAGA 57.313 61.111 0.00 0.00 42.45 3.71
167 168 3.139810 CAGATCCGACCCTGGAGAT 57.860 57.895 0.00 0.00 42.45 2.75
168 169 0.678395 CAGATCCGACCCTGGAGATG 59.322 60.000 0.00 0.00 42.45 2.90
169 170 1.118356 AGATCCGACCCTGGAGATGC 61.118 60.000 0.00 0.00 42.45 3.91
170 171 1.074926 ATCCGACCCTGGAGATGCT 60.075 57.895 0.00 0.00 42.45 3.79
171 172 0.188587 ATCCGACCCTGGAGATGCTA 59.811 55.000 0.00 0.00 42.45 3.49
172 173 0.032515 TCCGACCCTGGAGATGCTAA 60.033 55.000 0.00 0.00 33.05 3.09
173 174 1.051812 CCGACCCTGGAGATGCTAAT 58.948 55.000 0.00 0.00 0.00 1.73
174 175 1.417890 CCGACCCTGGAGATGCTAATT 59.582 52.381 0.00 0.00 0.00 1.40
175 176 2.158755 CCGACCCTGGAGATGCTAATTT 60.159 50.000 0.00 0.00 0.00 1.82
176 177 3.545703 CGACCCTGGAGATGCTAATTTT 58.454 45.455 0.00 0.00 0.00 1.82
177 178 3.947834 CGACCCTGGAGATGCTAATTTTT 59.052 43.478 0.00 0.00 0.00 1.94
178 179 5.123227 CGACCCTGGAGATGCTAATTTTTA 58.877 41.667 0.00 0.00 0.00 1.52
179 180 5.588648 CGACCCTGGAGATGCTAATTTTTAA 59.411 40.000 0.00 0.00 0.00 1.52
180 181 6.238484 CGACCCTGGAGATGCTAATTTTTAAG 60.238 42.308 0.00 0.00 0.00 1.85
181 182 5.893824 ACCCTGGAGATGCTAATTTTTAAGG 59.106 40.000 0.00 0.00 0.00 2.69
182 183 5.893824 CCCTGGAGATGCTAATTTTTAAGGT 59.106 40.000 0.00 0.00 0.00 3.50
183 184 6.039829 CCCTGGAGATGCTAATTTTTAAGGTC 59.960 42.308 0.00 0.00 0.00 3.85
184 185 6.830838 CCTGGAGATGCTAATTTTTAAGGTCT 59.169 38.462 0.00 0.00 0.00 3.85
185 186 7.993183 CCTGGAGATGCTAATTTTTAAGGTCTA 59.007 37.037 0.00 0.00 0.00 2.59
186 187 9.396022 CTGGAGATGCTAATTTTTAAGGTCTAA 57.604 33.333 0.00 0.00 0.00 2.10
187 188 9.920946 TGGAGATGCTAATTTTTAAGGTCTAAT 57.079 29.630 0.00 0.00 0.00 1.73
199 200 7.770366 TTTAAGGTCTAATCCTTTTCCAACC 57.230 36.000 3.31 0.00 44.36 3.77
200 201 3.951663 AGGTCTAATCCTTTTCCAACCG 58.048 45.455 0.00 0.00 33.52 4.44
201 202 2.422479 GGTCTAATCCTTTTCCAACCGC 59.578 50.000 0.00 0.00 0.00 5.68
202 203 2.422479 GTCTAATCCTTTTCCAACCGCC 59.578 50.000 0.00 0.00 0.00 6.13
203 204 2.040545 TCTAATCCTTTTCCAACCGCCA 59.959 45.455 0.00 0.00 0.00 5.69
204 205 1.256812 AATCCTTTTCCAACCGCCAG 58.743 50.000 0.00 0.00 0.00 4.85
205 206 0.611896 ATCCTTTTCCAACCGCCAGG 60.612 55.000 0.00 0.00 45.13 4.45
206 207 2.275380 CCTTTTCCAACCGCCAGGG 61.275 63.158 0.00 0.00 43.47 4.45
215 216 4.096003 CCGCCAGGGTCGATGGTT 62.096 66.667 5.48 0.00 40.17 3.67
216 217 2.819595 CGCCAGGGTCGATGGTTG 60.820 66.667 5.48 0.00 40.17 3.77
217 218 2.351276 GCCAGGGTCGATGGTTGT 59.649 61.111 5.48 0.00 40.17 3.32
218 219 1.600107 GCCAGGGTCGATGGTTGTA 59.400 57.895 5.48 0.00 40.17 2.41
219 220 0.462047 GCCAGGGTCGATGGTTGTAG 60.462 60.000 5.48 0.00 40.17 2.74
220 221 0.178068 CCAGGGTCGATGGTTGTAGG 59.822 60.000 0.00 0.00 32.85 3.18
221 222 0.178068 CAGGGTCGATGGTTGTAGGG 59.822 60.000 0.00 0.00 0.00 3.53
222 223 1.153229 GGGTCGATGGTTGTAGGGC 60.153 63.158 0.00 0.00 0.00 5.19
223 224 1.600107 GGTCGATGGTTGTAGGGCA 59.400 57.895 0.00 0.00 0.00 5.36
224 225 0.180406 GGTCGATGGTTGTAGGGCAT 59.820 55.000 0.00 0.00 0.00 4.40
225 226 1.414919 GGTCGATGGTTGTAGGGCATA 59.585 52.381 0.00 0.00 0.00 3.14
226 227 2.480845 GTCGATGGTTGTAGGGCATAC 58.519 52.381 1.66 1.66 34.72 2.39
227 228 1.414919 TCGATGGTTGTAGGGCATACC 59.585 52.381 6.88 0.00 40.67 2.73
228 229 1.140052 CGATGGTTGTAGGGCATACCA 59.860 52.381 6.88 0.24 43.89 3.25
229 230 2.806745 CGATGGTTGTAGGGCATACCAG 60.807 54.545 6.88 0.00 43.89 4.00
230 231 0.254747 TGGTTGTAGGGCATACCAGC 59.745 55.000 6.88 6.26 43.89 4.85
231 232 0.546598 GGTTGTAGGGCATACCAGCT 59.453 55.000 6.88 0.00 43.89 4.24
232 233 1.064685 GGTTGTAGGGCATACCAGCTT 60.065 52.381 6.88 0.00 43.89 3.74
233 234 2.171870 GGTTGTAGGGCATACCAGCTTA 59.828 50.000 6.88 0.00 43.89 3.09
234 235 3.203716 GTTGTAGGGCATACCAGCTTAC 58.796 50.000 6.88 0.00 43.89 2.34
235 236 1.766496 TGTAGGGCATACCAGCTTACC 59.234 52.381 6.88 0.00 43.89 2.85
236 237 1.045407 TAGGGCATACCAGCTTACCG 58.955 55.000 0.00 0.00 43.89 4.02
237 238 1.892391 GGGCATACCAGCTTACCGC 60.892 63.158 0.00 0.00 39.85 5.68
238 239 1.892391 GGCATACCAGCTTACCGCC 60.892 63.158 0.00 0.00 40.39 6.13
239 240 1.153249 GCATACCAGCTTACCGCCA 60.153 57.895 0.00 0.00 40.39 5.69
240 241 0.746563 GCATACCAGCTTACCGCCAA 60.747 55.000 0.00 0.00 40.39 4.52
241 242 1.299541 CATACCAGCTTACCGCCAAG 58.700 55.000 0.00 0.00 40.39 3.61
243 244 2.530958 TACCAGCTTACCGCCAAGGC 62.531 60.000 0.00 0.00 46.52 4.35
244 245 3.134127 CAGCTTACCGCCAAGGCC 61.134 66.667 5.34 0.00 46.52 5.19
245 246 4.426313 AGCTTACCGCCAAGGCCC 62.426 66.667 5.34 0.00 46.52 5.80
247 248 4.404098 CTTACCGCCAAGGCCCGT 62.404 66.667 5.34 4.67 46.52 5.28
248 249 4.397832 TTACCGCCAAGGCCCGTC 62.398 66.667 5.34 0.00 46.52 4.79
261 262 4.430765 CCGTCGCGGTAGGCAACT 62.431 66.667 6.13 0.00 45.23 3.16
262 263 3.927163 CCGTCGCGGTAGGCAACTT 62.927 63.158 6.13 0.00 44.19 2.66
263 264 2.546645 CCGTCGCGGTAGGCAACTTA 62.547 60.000 6.13 0.00 44.19 2.24
264 265 3.803421 CCGTCGCGGTAGGCAACTTAT 62.803 57.143 6.13 0.00 44.19 1.73
275 276 3.056952 GGCAACTTATTCACATCAGCG 57.943 47.619 0.00 0.00 0.00 5.18
276 277 2.444351 GCAACTTATTCACATCAGCGC 58.556 47.619 0.00 0.00 0.00 5.92
277 278 2.697363 CAACTTATTCACATCAGCGCG 58.303 47.619 0.00 0.00 0.00 6.86
278 279 1.290203 ACTTATTCACATCAGCGCGG 58.710 50.000 8.83 0.00 0.00 6.46
279 280 1.290203 CTTATTCACATCAGCGCGGT 58.710 50.000 4.23 4.23 0.00 5.68
280 281 1.004610 CTTATTCACATCAGCGCGGTG 60.005 52.381 31.22 31.22 0.00 4.94
281 282 1.428370 TATTCACATCAGCGCGGTGC 61.428 55.000 32.10 5.16 46.98 5.01
298 299 4.819783 CAGCCCTACTGCCAAACA 57.180 55.556 0.00 0.00 40.19 2.83
299 300 3.034924 CAGCCCTACTGCCAAACAA 57.965 52.632 0.00 0.00 40.19 2.83
300 301 1.327303 CAGCCCTACTGCCAAACAAA 58.673 50.000 0.00 0.00 40.19 2.83
301 302 1.686052 CAGCCCTACTGCCAAACAAAA 59.314 47.619 0.00 0.00 40.19 2.44
302 303 2.299867 CAGCCCTACTGCCAAACAAAAT 59.700 45.455 0.00 0.00 40.19 1.82
303 304 2.299867 AGCCCTACTGCCAAACAAAATG 59.700 45.455 0.00 0.00 0.00 2.32
304 305 2.037121 GCCCTACTGCCAAACAAAATGT 59.963 45.455 0.00 0.00 0.00 2.71
305 306 3.494223 GCCCTACTGCCAAACAAAATGTT 60.494 43.478 0.00 0.00 43.41 2.71
306 307 4.057432 CCCTACTGCCAAACAAAATGTTG 58.943 43.478 0.00 0.00 40.14 3.33
307 308 4.202202 CCCTACTGCCAAACAAAATGTTGA 60.202 41.667 1.62 0.00 40.14 3.18
308 309 5.511202 CCCTACTGCCAAACAAAATGTTGAT 60.511 40.000 1.62 0.00 40.14 2.57
309 310 6.295011 CCCTACTGCCAAACAAAATGTTGATA 60.295 38.462 1.62 0.00 40.14 2.15
310 311 6.808212 CCTACTGCCAAACAAAATGTTGATAG 59.192 38.462 1.62 0.00 40.14 2.08
311 312 6.160576 ACTGCCAAACAAAATGTTGATAGT 57.839 33.333 1.62 0.00 40.14 2.12
312 313 6.215845 ACTGCCAAACAAAATGTTGATAGTC 58.784 36.000 1.62 0.00 40.14 2.59
313 314 6.040842 ACTGCCAAACAAAATGTTGATAGTCT 59.959 34.615 1.62 0.00 40.14 3.24
314 315 6.215121 TGCCAAACAAAATGTTGATAGTCTG 58.785 36.000 1.62 0.00 40.14 3.51
315 316 6.183360 TGCCAAACAAAATGTTGATAGTCTGT 60.183 34.615 1.62 0.00 40.14 3.41
316 317 6.144402 GCCAAACAAAATGTTGATAGTCTGTG 59.856 38.462 1.62 0.00 40.14 3.66
317 318 6.144402 CCAAACAAAATGTTGATAGTCTGTGC 59.856 38.462 1.62 0.00 40.14 4.57
318 319 6.389830 AACAAAATGTTGATAGTCTGTGCA 57.610 33.333 1.62 0.00 39.45 4.57
319 320 6.389830 ACAAAATGTTGATAGTCTGTGCAA 57.610 33.333 1.62 0.00 38.20 4.08
320 321 6.208644 ACAAAATGTTGATAGTCTGTGCAAC 58.791 36.000 1.62 0.00 40.62 4.17
321 322 5.376854 AAATGTTGATAGTCTGTGCAACC 57.623 39.130 0.00 0.00 39.75 3.77
322 323 2.778299 TGTTGATAGTCTGTGCAACCC 58.222 47.619 0.00 0.00 39.75 4.11
323 324 2.371841 TGTTGATAGTCTGTGCAACCCT 59.628 45.455 0.00 0.00 39.75 4.34
324 325 3.580895 TGTTGATAGTCTGTGCAACCCTA 59.419 43.478 0.00 0.00 39.75 3.53
325 326 3.887621 TGATAGTCTGTGCAACCCTAC 57.112 47.619 0.00 0.00 34.36 3.18
326 327 2.500098 TGATAGTCTGTGCAACCCTACC 59.500 50.000 0.00 0.00 34.36 3.18
327 328 0.892755 TAGTCTGTGCAACCCTACCG 59.107 55.000 0.00 0.00 34.36 4.02
328 329 2.033194 GTCTGTGCAACCCTACCGC 61.033 63.158 0.00 0.00 34.36 5.68
329 330 2.746277 CTGTGCAACCCTACCGCC 60.746 66.667 0.00 0.00 34.36 6.13
330 331 4.690719 TGTGCAACCCTACCGCCG 62.691 66.667 0.00 0.00 34.36 6.46
331 332 4.382320 GTGCAACCCTACCGCCGA 62.382 66.667 0.00 0.00 0.00 5.54
332 333 4.077184 TGCAACCCTACCGCCGAG 62.077 66.667 0.00 0.00 0.00 4.63
346 347 4.514577 CGAGGTGCCCAGCGGTAG 62.515 72.222 0.00 0.00 0.00 3.18
347 348 4.162690 GAGGTGCCCAGCGGTAGG 62.163 72.222 0.00 0.00 0.00 3.18
349 350 4.778143 GGTGCCCAGCGGTAGGTG 62.778 72.222 0.04 0.00 44.87 4.00
374 375 7.568199 GGTACCAGCATTGTATTTGATACTT 57.432 36.000 7.15 0.00 36.70 2.24
375 376 8.671384 GGTACCAGCATTGTATTTGATACTTA 57.329 34.615 7.15 0.00 36.70 2.24
376 377 8.774586 GGTACCAGCATTGTATTTGATACTTAG 58.225 37.037 7.15 0.00 36.70 2.18
377 378 9.542462 GTACCAGCATTGTATTTGATACTTAGA 57.458 33.333 0.00 0.00 36.70 2.10
378 379 8.438676 ACCAGCATTGTATTTGATACTTAGAC 57.561 34.615 0.00 0.00 36.70 2.59
379 380 8.046708 ACCAGCATTGTATTTGATACTTAGACA 58.953 33.333 0.00 0.00 36.70 3.41
380 381 9.060347 CCAGCATTGTATTTGATACTTAGACAT 57.940 33.333 0.00 0.00 36.70 3.06
381 382 9.874215 CAGCATTGTATTTGATACTTAGACATG 57.126 33.333 0.00 0.00 36.70 3.21
382 383 9.618890 AGCATTGTATTTGATACTTAGACATGT 57.381 29.630 0.00 0.00 36.70 3.21
388 389 9.210426 GTATTTGATACTTAGACATGTTTTGCG 57.790 33.333 0.00 0.00 33.00 4.85
389 390 5.794687 TGATACTTAGACATGTTTTGCGG 57.205 39.130 0.00 0.00 0.00 5.69
390 391 5.242434 TGATACTTAGACATGTTTTGCGGT 58.758 37.500 0.00 0.00 0.00 5.68
391 392 6.399743 TGATACTTAGACATGTTTTGCGGTA 58.600 36.000 0.00 0.22 0.00 4.02
392 393 6.874664 TGATACTTAGACATGTTTTGCGGTAA 59.125 34.615 0.00 0.00 0.00 2.85
393 394 5.607119 ACTTAGACATGTTTTGCGGTAAG 57.393 39.130 0.00 0.00 0.00 2.34
394 395 4.454504 ACTTAGACATGTTTTGCGGTAAGG 59.545 41.667 0.00 0.00 0.00 2.69
395 396 1.539827 AGACATGTTTTGCGGTAAGGC 59.460 47.619 0.00 0.00 0.00 4.35
396 397 0.239879 ACATGTTTTGCGGTAAGGCG 59.760 50.000 0.00 0.00 35.06 5.52
397 398 0.239879 CATGTTTTGCGGTAAGGCGT 59.760 50.000 0.00 0.00 35.06 5.68
398 399 0.239879 ATGTTTTGCGGTAAGGCGTG 59.760 50.000 0.00 0.00 35.06 5.34
399 400 1.728074 GTTTTGCGGTAAGGCGTGC 60.728 57.895 0.00 0.00 35.06 5.34
400 401 2.187493 TTTTGCGGTAAGGCGTGCA 61.187 52.632 0.00 0.00 35.06 4.57
401 402 1.725557 TTTTGCGGTAAGGCGTGCAA 61.726 50.000 0.00 0.00 44.81 4.08
402 403 2.395367 TTTGCGGTAAGGCGTGCAAC 62.395 55.000 1.83 0.00 46.00 4.17
403 404 4.097863 GCGGTAAGGCGTGCAACC 62.098 66.667 0.00 0.00 0.00 3.77
404 405 2.666862 CGGTAAGGCGTGCAACCA 60.667 61.111 9.56 0.00 32.04 3.67
405 406 2.038269 CGGTAAGGCGTGCAACCAT 61.038 57.895 9.56 0.13 32.04 3.55
406 407 0.741574 CGGTAAGGCGTGCAACCATA 60.742 55.000 9.56 0.00 32.04 2.74
407 408 0.730840 GGTAAGGCGTGCAACCATAC 59.269 55.000 11.97 11.97 32.04 2.39
408 409 0.730840 GTAAGGCGTGCAACCATACC 59.269 55.000 9.56 0.00 0.00 2.73
409 410 0.741574 TAAGGCGTGCAACCATACCG 60.742 55.000 9.56 0.00 0.00 4.02
410 411 2.741486 AAGGCGTGCAACCATACCGT 62.741 55.000 9.56 0.00 0.00 4.83
411 412 2.478746 GCGTGCAACCATACCGTG 59.521 61.111 0.00 0.00 0.00 4.94
412 413 2.030401 GCGTGCAACCATACCGTGA 61.030 57.895 0.00 0.00 0.00 4.35
413 414 1.570347 GCGTGCAACCATACCGTGAA 61.570 55.000 0.00 0.00 0.00 3.18
414 415 0.442310 CGTGCAACCATACCGTGAAG 59.558 55.000 0.00 0.00 0.00 3.02
416 417 0.322098 TGCAACCATACCGTGAAGGG 60.322 55.000 0.00 0.00 46.96 3.95
417 418 1.654023 GCAACCATACCGTGAAGGGC 61.654 60.000 0.00 0.00 46.96 5.19
418 419 1.029947 CAACCATACCGTGAAGGGCC 61.030 60.000 0.00 0.00 46.96 5.80
419 420 1.205460 AACCATACCGTGAAGGGCCT 61.205 55.000 0.00 0.00 46.96 5.19
420 421 1.146263 CCATACCGTGAAGGGCCTC 59.854 63.158 6.46 0.56 46.96 4.70
421 422 1.227263 CATACCGTGAAGGGCCTCG 60.227 63.158 6.46 6.28 46.96 4.63
422 423 1.380785 ATACCGTGAAGGGCCTCGA 60.381 57.895 6.46 0.00 46.96 4.04
423 424 1.673808 ATACCGTGAAGGGCCTCGAC 61.674 60.000 6.46 5.58 46.96 4.20
424 425 4.796231 CCGTGAAGGGCCTCGACG 62.796 72.222 23.59 23.59 35.97 5.12
425 426 3.744719 CGTGAAGGGCCTCGACGA 61.745 66.667 25.39 0.00 31.71 4.20
426 427 2.893398 GTGAAGGGCCTCGACGAT 59.107 61.111 6.46 0.00 0.00 3.73
427 428 1.721664 CGTGAAGGGCCTCGACGATA 61.722 60.000 25.39 0.00 31.71 2.92
428 429 0.030908 GTGAAGGGCCTCGACGATAG 59.969 60.000 6.46 0.00 46.19 2.08
429 430 1.107538 TGAAGGGCCTCGACGATAGG 61.108 60.000 6.46 0.00 43.77 2.57
444 445 4.085009 ACGATAGGCAGTTATACCCTACC 58.915 47.826 0.00 0.00 43.77 3.18
445 446 3.128242 CGATAGGCAGTTATACCCTACCG 59.872 52.174 0.00 0.00 32.41 4.02
446 447 2.761786 AGGCAGTTATACCCTACCGA 57.238 50.000 0.00 0.00 0.00 4.69
447 448 2.314246 AGGCAGTTATACCCTACCGAC 58.686 52.381 0.00 0.00 0.00 4.79
448 449 2.034124 GGCAGTTATACCCTACCGACA 58.966 52.381 0.00 0.00 0.00 4.35
449 450 2.631545 GGCAGTTATACCCTACCGACAT 59.368 50.000 0.00 0.00 0.00 3.06
450 451 3.305881 GGCAGTTATACCCTACCGACATC 60.306 52.174 0.00 0.00 0.00 3.06
451 452 3.611057 GCAGTTATACCCTACCGACATCG 60.611 52.174 0.00 0.00 39.44 3.84
452 453 3.817084 CAGTTATACCCTACCGACATCGA 59.183 47.826 2.09 0.00 43.02 3.59
453 454 3.817647 AGTTATACCCTACCGACATCGAC 59.182 47.826 2.09 0.00 43.02 4.20
454 455 1.613836 ATACCCTACCGACATCGACC 58.386 55.000 2.09 0.00 43.02 4.79
455 456 0.466189 TACCCTACCGACATCGACCC 60.466 60.000 2.09 0.00 43.02 4.46
456 457 2.496291 CCCTACCGACATCGACCCC 61.496 68.421 2.09 0.00 43.02 4.95
457 458 2.719979 CTACCGACATCGACCCCG 59.280 66.667 2.09 0.00 43.02 5.73
508 509 7.707624 AAAAATATCAGAGTCAAATCTGGCA 57.292 32.000 7.53 0.00 45.60 4.92
509 510 7.893124 AAAATATCAGAGTCAAATCTGGCAT 57.107 32.000 7.53 0.00 45.60 4.40
510 511 8.985315 AAAATATCAGAGTCAAATCTGGCATA 57.015 30.769 7.53 0.67 45.60 3.14
511 512 8.985315 AAATATCAGAGTCAAATCTGGCATAA 57.015 30.769 7.53 0.00 45.60 1.90
512 513 7.976135 ATATCAGAGTCAAATCTGGCATAAC 57.024 36.000 7.53 0.00 45.60 1.89
513 514 5.426689 TCAGAGTCAAATCTGGCATAACT 57.573 39.130 7.53 0.00 45.60 2.24
514 515 5.809001 TCAGAGTCAAATCTGGCATAACTT 58.191 37.500 7.53 0.00 45.60 2.66
515 516 6.240894 TCAGAGTCAAATCTGGCATAACTTT 58.759 36.000 7.53 0.00 45.60 2.66
516 517 6.372659 TCAGAGTCAAATCTGGCATAACTTTC 59.627 38.462 7.53 0.00 45.60 2.62
517 518 5.352569 AGAGTCAAATCTGGCATAACTTTCG 59.647 40.000 0.00 0.00 0.00 3.46
518 519 4.098416 GTCAAATCTGGCATAACTTTCGC 58.902 43.478 0.00 0.00 0.00 4.70
519 520 3.755905 TCAAATCTGGCATAACTTTCGCA 59.244 39.130 0.00 0.00 0.00 5.10
520 521 4.217334 TCAAATCTGGCATAACTTTCGCAA 59.783 37.500 0.00 0.00 0.00 4.85
521 522 4.782019 AATCTGGCATAACTTTCGCAAA 57.218 36.364 0.00 0.00 0.00 3.68
522 523 4.782019 ATCTGGCATAACTTTCGCAAAA 57.218 36.364 0.00 0.00 0.00 2.44
523 524 4.782019 TCTGGCATAACTTTCGCAAAAT 57.218 36.364 0.00 0.00 0.00 1.82
524 525 4.484236 TCTGGCATAACTTTCGCAAAATG 58.516 39.130 0.00 0.00 0.00 2.32
525 526 4.217334 TCTGGCATAACTTTCGCAAAATGA 59.783 37.500 0.00 0.00 0.00 2.57
526 527 5.070770 TGGCATAACTTTCGCAAAATGAT 57.929 34.783 0.00 0.00 0.00 2.45
527 528 5.477510 TGGCATAACTTTCGCAAAATGATT 58.522 33.333 0.00 0.00 0.00 2.57
528 529 6.625362 TGGCATAACTTTCGCAAAATGATTA 58.375 32.000 0.00 0.00 0.00 1.75
529 530 7.093354 TGGCATAACTTTCGCAAAATGATTAA 58.907 30.769 0.00 0.00 0.00 1.40
530 531 7.600375 TGGCATAACTTTCGCAAAATGATTAAA 59.400 29.630 0.00 0.00 0.00 1.52
531 532 8.439286 GGCATAACTTTCGCAAAATGATTAAAA 58.561 29.630 0.00 0.00 0.00 1.52
532 533 9.249844 GCATAACTTTCGCAAAATGATTAAAAC 57.750 29.630 0.00 0.00 0.00 2.43
535 536 7.172654 ACTTTCGCAAAATGATTAAAACACC 57.827 32.000 0.00 0.00 0.00 4.16
536 537 5.814314 TTCGCAAAATGATTAAAACACCG 57.186 34.783 0.00 0.00 0.00 4.94
537 538 5.109662 TCGCAAAATGATTAAAACACCGA 57.890 34.783 0.00 0.00 0.00 4.69
538 539 5.520632 TCGCAAAATGATTAAAACACCGAA 58.479 33.333 0.00 0.00 0.00 4.30
539 540 6.153067 TCGCAAAATGATTAAAACACCGAAT 58.847 32.000 0.00 0.00 0.00 3.34
540 541 6.642950 TCGCAAAATGATTAAAACACCGAATT 59.357 30.769 0.00 0.00 0.00 2.17
541 542 7.169982 TCGCAAAATGATTAAAACACCGAATTT 59.830 29.630 0.00 0.00 0.00 1.82
542 543 8.428536 CGCAAAATGATTAAAACACCGAATTTA 58.571 29.630 0.00 0.00 0.00 1.40
543 544 9.739786 GCAAAATGATTAAAACACCGAATTTAG 57.260 29.630 0.00 0.00 0.00 1.85
544 545 9.739786 CAAAATGATTAAAACACCGAATTTAGC 57.260 29.630 0.00 0.00 0.00 3.09
545 546 8.474006 AAATGATTAAAACACCGAATTTAGCC 57.526 30.769 0.00 0.00 0.00 3.93
546 547 5.632959 TGATTAAAACACCGAATTTAGCCG 58.367 37.500 0.00 0.00 0.00 5.52
547 548 2.341318 AAAACACCGAATTTAGCCGC 57.659 45.000 0.00 0.00 0.00 6.53
548 549 0.524414 AAACACCGAATTTAGCCGCC 59.476 50.000 0.00 0.00 0.00 6.13
549 550 1.641123 AACACCGAATTTAGCCGCCG 61.641 55.000 0.00 0.00 0.00 6.46
550 551 2.512974 ACCGAATTTAGCCGCCGG 60.513 61.111 0.00 0.00 45.09 6.13
551 552 3.276846 CCGAATTTAGCCGCCGGG 61.277 66.667 4.77 0.00 36.81 5.73
552 553 2.202960 CGAATTTAGCCGCCGGGA 60.203 61.111 4.77 0.00 34.06 5.14
553 554 2.244651 CGAATTTAGCCGCCGGGAG 61.245 63.158 4.77 0.00 34.06 4.30
599 600 2.889988 CCAACCGATCGATGCGCA 60.890 61.111 18.66 14.96 0.00 6.09
642 644 0.383231 CAGGGCTCAAAATGATCGGC 59.617 55.000 0.00 0.00 0.00 5.54
668 670 0.471617 CTGGCTCACCTGGGGAATAG 59.528 60.000 0.00 0.00 36.63 1.73
669 671 0.044092 TGGCTCACCTGGGGAATAGA 59.956 55.000 0.00 0.00 36.63 1.98
670 672 0.761802 GGCTCACCTGGGGAATAGAG 59.238 60.000 0.00 0.00 0.00 2.43
671 673 1.692762 GGCTCACCTGGGGAATAGAGA 60.693 57.143 0.00 0.00 0.00 3.10
672 674 1.691434 GCTCACCTGGGGAATAGAGAG 59.309 57.143 0.00 0.00 0.00 3.20
793 799 1.812507 GTCGGTATGCCACGGGAAC 60.813 63.158 0.00 0.00 34.09 3.62
838 844 2.022129 CACTCACTCGCCCGACAAC 61.022 63.158 0.00 0.00 0.00 3.32
839 845 2.805353 CTCACTCGCCCGACAACG 60.805 66.667 0.00 0.00 39.43 4.10
944 989 4.142026 TGCGTGTATATATATGCCCAGTCC 60.142 45.833 17.92 0.00 0.00 3.85
1152 1213 3.009714 AAGAGGGGCTTCGGGGAC 61.010 66.667 0.00 0.00 28.17 4.46
1480 1553 3.294493 GCTGCCCTCACGCCAAAA 61.294 61.111 0.00 0.00 0.00 2.44
1557 1639 1.005394 CGTGCCGTGGGAGTAAGTT 60.005 57.895 0.00 0.00 0.00 2.66
1567 1649 4.747108 CGTGGGAGTAAGTTCATCATCATC 59.253 45.833 0.00 0.00 0.00 2.92
1568 1650 5.452496 CGTGGGAGTAAGTTCATCATCATCT 60.452 44.000 0.00 0.00 0.00 2.90
1569 1651 5.988561 GTGGGAGTAAGTTCATCATCATCTC 59.011 44.000 0.00 0.00 0.00 2.75
1580 1662 4.470304 TCATCATCATCTCCATCTCCCATC 59.530 45.833 0.00 0.00 0.00 3.51
1635 1726 6.051717 CCTCCCTGAGTGTTATAACTGAATG 58.948 44.000 16.33 4.76 0.00 2.67
1648 1739 2.983229 ACTGAATGACTGACATCCTGC 58.017 47.619 0.00 0.00 38.38 4.85
1653 1744 1.341080 TGACTGACATCCTGCTGTGA 58.659 50.000 0.00 0.00 0.00 3.58
1656 1747 1.065636 ACTGACATCCTGCTGTGATGG 60.066 52.381 18.97 9.35 43.10 3.51
1661 1752 1.065636 CATCCTGCTGTGATGGTGTCT 60.066 52.381 11.63 0.00 36.74 3.41
1729 1820 6.455360 TTGCTCTGAAGAAACAAACAGAAT 57.545 33.333 0.00 0.00 38.60 2.40
1736 1827 4.574599 AGAAACAAACAGAATGGCACTC 57.425 40.909 0.00 0.00 43.62 3.51
1758 1849 9.617975 CACTCCTAGATTTTGAGAAATGTTTTC 57.382 33.333 0.00 0.00 35.65 2.29
1785 1877 6.596309 TTCTCTTCTGTGAGATTTCAGCTA 57.404 37.500 0.00 0.00 41.98 3.32
1786 1878 6.788598 TCTCTTCTGTGAGATTTCAGCTAT 57.211 37.500 0.00 0.00 38.08 2.97
1787 1879 6.571605 TCTCTTCTGTGAGATTTCAGCTATG 58.428 40.000 0.00 0.00 38.08 2.23
1815 1907 0.109153 TCACTGGCTGCTCATGTTGT 59.891 50.000 0.00 0.00 0.00 3.32
1829 1921 6.368791 TGCTCATGTTGTAGACATCTTGTAAC 59.631 38.462 0.00 0.00 45.88 2.50
1878 1975 9.884814 ATACTACTACAACATTTCCTCTATCCT 57.115 33.333 0.00 0.00 0.00 3.24
1881 1978 9.535878 CTACTACAACATTTCCTCTATCCTTTC 57.464 37.037 0.00 0.00 0.00 2.62
1899 1996 1.724545 TCTCCCGTTTTCTCTCCCAA 58.275 50.000 0.00 0.00 0.00 4.12
1934 2031 5.666969 TGTTGCGGCTATATGTATGTTTC 57.333 39.130 0.00 0.00 0.00 2.78
1938 2035 4.283467 TGCGGCTATATGTATGTTTCTCCT 59.717 41.667 0.00 0.00 0.00 3.69
1952 2049 6.282199 TGTTTCTCCTACCAGAATACAGTC 57.718 41.667 0.00 0.00 32.32 3.51
1963 2060 4.926238 CCAGAATACAGTCTCAGTTGTCAC 59.074 45.833 0.00 0.00 0.00 3.67
1978 2075 4.220821 AGTTGTCACACTGTCTACCCTATG 59.779 45.833 0.00 0.00 0.00 2.23
1996 2093 4.409901 CCTATGGAAAAGGGCCAATTCAAT 59.590 41.667 19.06 16.35 39.21 2.57
2001 2098 4.263025 GGAAAAGGGCCAATTCAATTCTGT 60.263 41.667 19.06 0.00 0.00 3.41
2003 2100 4.541973 AAGGGCCAATTCAATTCTGTTC 57.458 40.909 6.18 0.00 0.00 3.18
2004 2101 3.782992 AGGGCCAATTCAATTCTGTTCT 58.217 40.909 6.18 0.00 0.00 3.01
2005 2102 3.512724 AGGGCCAATTCAATTCTGTTCTG 59.487 43.478 6.18 0.00 0.00 3.02
2008 2105 5.337813 GGGCCAATTCAATTCTGTTCTGATT 60.338 40.000 4.39 0.00 0.00 2.57
2009 2106 5.579511 GGCCAATTCAATTCTGTTCTGATTG 59.420 40.000 0.00 0.00 0.00 2.67
2010 2107 6.392354 GCCAATTCAATTCTGTTCTGATTGA 58.608 36.000 0.00 0.00 0.00 2.57
2011 2108 7.039882 GCCAATTCAATTCTGTTCTGATTGAT 58.960 34.615 0.00 0.00 32.22 2.57
2012 2109 7.548075 GCCAATTCAATTCTGTTCTGATTGATT 59.452 33.333 0.00 0.00 32.22 2.57
2013 2110 9.084164 CCAATTCAATTCTGTTCTGATTGATTC 57.916 33.333 0.00 0.00 32.22 2.52
2028 2128 5.758784 TGATTGATTCATGCTCTGTCAGATC 59.241 40.000 2.22 0.00 0.00 2.75
2073 2173 1.464608 CGCGGCTGATTTCTTTTCTCA 59.535 47.619 0.00 0.00 0.00 3.27
2080 2180 6.626623 CGGCTGATTTCTTTTCTCAATGGAAT 60.627 38.462 0.00 0.00 0.00 3.01
2081 2181 7.101700 GGCTGATTTCTTTTCTCAATGGAATT 58.898 34.615 0.00 0.00 36.63 2.17
2105 2205 1.084370 CCGGACAGGCTCGATTTGTC 61.084 60.000 0.00 12.91 40.29 3.18
2115 2215 2.005451 CTCGATTTGTCAAGCCTCAGG 58.995 52.381 0.00 0.00 0.00 3.86
2170 2270 9.922305 GTTACAGATGCTAACAGAAAATCATAC 57.078 33.333 0.00 0.00 0.00 2.39
2171 2271 9.890629 TTACAGATGCTAACAGAAAATCATACT 57.109 29.630 0.00 0.00 0.00 2.12
2210 2310 0.874175 TTCTGCACGAACACTGGACG 60.874 55.000 0.00 0.00 0.00 4.79
2242 2342 1.644786 GACGGGGGAATGTTTGCTCG 61.645 60.000 0.00 0.00 0.00 5.03
2287 2387 1.205893 TGGCAACCAACTTCGCTTTTT 59.794 42.857 0.00 0.00 0.00 1.94
2288 2388 2.427453 TGGCAACCAACTTCGCTTTTTA 59.573 40.909 0.00 0.00 0.00 1.52
2290 2390 2.466205 GCAACCAACTTCGCTTTTTACG 59.534 45.455 0.00 0.00 0.00 3.18
2292 2392 4.099824 CAACCAACTTCGCTTTTTACGTT 58.900 39.130 0.00 0.00 0.00 3.99
2293 2393 3.687200 ACCAACTTCGCTTTTTACGTTG 58.313 40.909 0.00 0.00 33.47 4.10
2294 2394 3.127376 ACCAACTTCGCTTTTTACGTTGT 59.873 39.130 0.00 0.00 32.20 3.32
2295 2395 3.480668 CCAACTTCGCTTTTTACGTTGTG 59.519 43.478 0.00 0.00 32.20 3.33
2297 2397 4.345271 ACTTCGCTTTTTACGTTGTGTT 57.655 36.364 0.00 0.00 0.00 3.32
2298 2398 4.092816 ACTTCGCTTTTTACGTTGTGTTG 58.907 39.130 0.00 0.00 0.00 3.33
2299 2399 2.442424 TCGCTTTTTACGTTGTGTTGC 58.558 42.857 0.00 0.00 0.00 4.17
2301 2401 2.442424 GCTTTTTACGTTGTGTTGCGA 58.558 42.857 0.00 0.00 0.00 5.10
2302 2402 2.212466 GCTTTTTACGTTGTGTTGCGAC 59.788 45.455 0.00 0.00 0.00 5.19
2304 2404 3.743567 TTTTACGTTGTGTTGCGACTT 57.256 38.095 5.50 0.00 0.00 3.01
2305 2405 2.722936 TTACGTTGTGTTGCGACTTG 57.277 45.000 5.50 0.00 0.00 3.16
2306 2406 1.642728 TACGTTGTGTTGCGACTTGT 58.357 45.000 5.50 0.00 0.00 3.16
2307 2407 0.096281 ACGTTGTGTTGCGACTTGTG 59.904 50.000 5.50 0.00 0.00 3.33
2308 2408 0.371989 CGTTGTGTTGCGACTTGTGA 59.628 50.000 5.50 0.00 0.00 3.58
2309 2409 1.810197 GTTGTGTTGCGACTTGTGAC 58.190 50.000 5.50 0.00 0.00 3.67
2310 2410 1.129624 GTTGTGTTGCGACTTGTGACA 59.870 47.619 5.50 0.00 0.00 3.58
2311 2411 1.006086 TGTGTTGCGACTTGTGACAG 58.994 50.000 5.50 0.00 0.00 3.51
2312 2412 0.316196 GTGTTGCGACTTGTGACAGC 60.316 55.000 5.50 0.00 0.00 4.40
2313 2413 1.279840 GTTGCGACTTGTGACAGCC 59.720 57.895 0.00 0.00 0.00 4.85
2357 2457 6.333416 TCAGTCTTCCTGATTTAGATCAACG 58.667 40.000 0.00 0.00 45.34 4.10
2358 2458 5.521735 CAGTCTTCCTGATTTAGATCAACGG 59.478 44.000 0.00 0.00 44.49 4.44
2362 2462 6.380274 TCTTCCTGATTTAGATCAACGGTAGT 59.620 38.462 0.00 0.00 41.55 2.73
2363 2463 7.558807 TCTTCCTGATTTAGATCAACGGTAGTA 59.441 37.037 0.00 0.00 41.55 1.82
2372 2472 9.736414 TTTAGATCAACGGTAGTATAGATAGCT 57.264 33.333 0.00 0.00 0.00 3.32
2379 2479 7.593875 ACGGTAGTATAGATAGCTAAAGACG 57.406 40.000 0.00 0.00 0.00 4.18
2439 2539 4.402616 TGGGATTCTTCTTGGTTGGATT 57.597 40.909 0.00 0.00 0.00 3.01
2499 2599 0.739462 CAATAGCCAGCGACCGTTCA 60.739 55.000 0.00 0.00 0.00 3.18
2500 2600 0.036765 AATAGCCAGCGACCGTTCAA 60.037 50.000 0.00 0.00 0.00 2.69
2504 2605 3.423154 CAGCGACCGTTCAAGGCC 61.423 66.667 0.00 0.00 33.69 5.19
2505 2606 3.936203 AGCGACCGTTCAAGGCCA 61.936 61.111 5.01 0.00 33.69 5.36
2529 2630 1.472082 TGGCATTTATGAACAGCGTGG 59.528 47.619 0.00 0.00 0.00 4.94
2530 2631 1.472480 GGCATTTATGAACAGCGTGGT 59.528 47.619 0.00 0.00 0.00 4.16
2536 2637 1.106351 ATGAACAGCGTGGTTGGCAA 61.106 50.000 0.00 0.00 0.00 4.52
2548 2657 4.208253 CGTGGTTGGCAATTTTAGTGTTTC 59.792 41.667 1.92 0.00 0.00 2.78
2549 2658 5.112686 GTGGTTGGCAATTTTAGTGTTTCA 58.887 37.500 1.92 0.00 0.00 2.69
2551 2660 5.127845 TGGTTGGCAATTTTAGTGTTTCAGA 59.872 36.000 1.92 0.00 0.00 3.27
2557 2666 7.984050 TGGCAATTTTAGTGTTTCAGAAATGAA 59.016 29.630 0.00 0.00 0.00 2.57
2596 2708 7.276953 ACATGCATTTCGTTTATTTTAGTGC 57.723 32.000 0.00 0.00 0.00 4.40
2597 2709 6.865726 ACATGCATTTCGTTTATTTTAGTGCA 59.134 30.769 0.00 0.00 43.17 4.57
2600 2712 7.948137 TGCATTTCGTTTATTTTAGTGCATTC 58.052 30.769 0.00 0.00 35.41 2.67
2601 2713 7.596621 TGCATTTCGTTTATTTTAGTGCATTCA 59.403 29.630 0.00 0.00 35.41 2.57
2614 2727 5.496133 AGTGCATTCATATCTGAAACTGC 57.504 39.130 10.79 10.79 44.29 4.40
2622 2735 0.670546 ATCTGAAACTGCCACCGTCG 60.671 55.000 0.00 0.00 0.00 5.12
2624 2737 2.029964 GAAACTGCCACCGTCGGA 59.970 61.111 20.51 0.00 0.00 4.55
2642 2755 3.580022 TCGGATCTTGATCATGTGGCTAT 59.420 43.478 12.02 0.00 0.00 2.97
2655 2768 2.742116 GGCTATGAGGGGGTTCGCA 61.742 63.158 0.00 0.00 0.00 5.10
2657 2770 1.904771 CTATGAGGGGGTTCGCACA 59.095 57.895 0.00 0.00 0.00 4.57
2672 2785 1.246737 GCACAGCTTTTCCTCCTGGG 61.247 60.000 0.00 0.00 33.23 4.45
2673 2786 0.610232 CACAGCTTTTCCTCCTGGGG 60.610 60.000 0.00 0.00 35.33 4.96
2674 2787 0.772124 ACAGCTTTTCCTCCTGGGGA 60.772 55.000 0.00 0.00 35.33 4.81
2675 2788 0.405585 CAGCTTTTCCTCCTGGGGAA 59.594 55.000 11.27 11.27 42.86 3.97
2676 2789 0.701147 AGCTTTTCCTCCTGGGGAAG 59.299 55.000 13.90 3.54 44.85 3.46
2699 2812 2.584143 CGGTCGCCGGGTAACATC 60.584 66.667 2.18 0.00 44.15 3.06
2706 2819 1.692173 GCCGGGTAACATCAGGGCTA 61.692 60.000 2.18 0.00 37.57 3.93
2707 2820 0.834612 CCGGGTAACATCAGGGCTAA 59.165 55.000 0.00 0.00 39.74 3.09
2708 2821 1.420138 CCGGGTAACATCAGGGCTAAT 59.580 52.381 0.00 0.00 39.74 1.73
2709 2822 2.158667 CCGGGTAACATCAGGGCTAATT 60.159 50.000 0.00 0.00 39.74 1.40
2710 2823 3.071892 CCGGGTAACATCAGGGCTAATTA 59.928 47.826 0.00 0.00 39.74 1.40
2711 2824 4.315803 CGGGTAACATCAGGGCTAATTAG 58.684 47.826 8.20 8.20 39.74 1.73
2712 2825 4.072839 GGGTAACATCAGGGCTAATTAGC 58.927 47.826 26.27 26.27 44.03 3.09
2731 2844 2.590821 GCCCAATCTACATGGCTTCAT 58.409 47.619 0.00 0.00 40.77 2.57
2739 2852 4.682787 TCTACATGGCTTCATCGTGTAAG 58.317 43.478 0.00 0.00 36.53 2.34
2749 2862 5.405571 GCTTCATCGTGTAAGAAGTGAAAGA 59.594 40.000 0.00 0.00 40.57 2.52
2765 2879 5.588648 AGTGAAAGATCGTGAACCTTTGAAA 59.411 36.000 0.00 0.00 31.06 2.69
2786 2900 5.424121 AAGACAACGTTTGGATTCTCAAG 57.576 39.130 0.00 0.00 34.12 3.02
2798 2912 5.595885 TGGATTCTCAAGATCAATCTCGAC 58.404 41.667 0.00 0.00 35.76 4.20
2803 2917 4.220602 TCTCAAGATCAATCTCGACCACAA 59.779 41.667 0.00 0.00 35.76 3.33
2804 2918 4.245660 TCAAGATCAATCTCGACCACAAC 58.754 43.478 0.00 0.00 35.76 3.32
2805 2919 3.961480 AGATCAATCTCGACCACAACA 57.039 42.857 0.00 0.00 29.30 3.33
2828 2942 3.181495 CCTCTAAGCAACACCTACGAGAG 60.181 52.174 0.00 0.00 0.00 3.20
2833 2947 1.194772 GCAACACCTACGAGAGTTTGC 59.805 52.381 0.00 0.00 46.40 3.68
2839 2953 1.187087 CTACGAGAGTTTGCCTCCCT 58.813 55.000 0.00 0.00 46.40 4.20
2844 2958 0.853530 AGAGTTTGCCTCCCTTTGGT 59.146 50.000 0.00 0.00 41.47 3.67
2865 2979 1.112113 GCTCCTTCGGGATACTCACA 58.888 55.000 0.00 0.00 44.11 3.58
2869 2983 4.202223 GCTCCTTCGGGATACTCACATTTA 60.202 45.833 0.00 0.00 44.11 1.40
2892 3006 4.133078 GGAGGATGTTGAGGATGACATTC 58.867 47.826 0.00 0.00 36.67 2.67
2897 3011 4.356405 TGTTGAGGATGACATTCTGTGT 57.644 40.909 0.00 0.00 45.83 3.72
2898 3012 5.482163 TGTTGAGGATGACATTCTGTGTA 57.518 39.130 0.00 0.00 42.36 2.90
2899 3013 5.482006 TGTTGAGGATGACATTCTGTGTAG 58.518 41.667 0.00 0.00 42.36 2.74
2907 3022 5.290493 TGACATTCTGTGTAGAACAAGGT 57.710 39.130 0.00 0.00 45.17 3.50
2911 3026 5.163301 ACATTCTGTGTAGAACAAGGTGAGT 60.163 40.000 0.00 0.00 45.17 3.41
2928 3043 0.038310 AGTGGGCTTTACTCCTTGGC 59.962 55.000 0.00 0.00 0.00 4.52
2934 3049 2.514803 GCTTTACTCCTTGGCTTTGGA 58.485 47.619 0.00 0.00 0.00 3.53
2935 3050 2.229062 GCTTTACTCCTTGGCTTTGGAC 59.771 50.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.739667 CCCATGCCATGCACTGATG 59.260 57.895 0.00 0.00 43.04 3.07
4 5 2.131709 GCCCATGCCATGCACTGAT 61.132 57.895 0.00 0.00 43.04 2.90
5 6 2.756691 GCCCATGCCATGCACTGA 60.757 61.111 0.00 0.00 43.04 3.41
6 7 2.651105 TTGCCCATGCCATGCACTG 61.651 57.895 0.00 0.00 43.04 3.66
7 8 2.284039 TTGCCCATGCCATGCACT 60.284 55.556 0.00 0.00 43.04 4.40
8 9 2.125431 GTTGCCCATGCCATGCAC 60.125 61.111 0.00 0.00 43.04 4.57
9 10 3.392243 GGTTGCCCATGCCATGCA 61.392 61.111 0.00 0.00 44.86 3.96
10 11 3.379865 CTGGTTGCCCATGCCATGC 62.380 63.158 0.00 0.00 40.90 4.06
11 12 2.897207 CTGGTTGCCCATGCCATG 59.103 61.111 0.00 0.00 40.90 3.66
12 13 3.078836 GCTGGTTGCCCATGCCAT 61.079 61.111 0.00 0.00 40.90 4.40
13 14 4.617556 TGCTGGTTGCCCATGCCA 62.618 61.111 0.00 0.00 40.90 4.92
14 15 4.073200 GTGCTGGTTGCCCATGCC 62.073 66.667 0.00 0.00 40.90 4.40
15 16 4.073200 GGTGCTGGTTGCCCATGC 62.073 66.667 0.00 0.00 40.90 4.06
16 17 3.384532 GGGTGCTGGTTGCCCATG 61.385 66.667 0.00 0.00 40.90 3.66
20 21 4.966787 TTCCGGGTGCTGGTTGCC 62.967 66.667 0.00 0.00 42.00 4.52
21 22 3.670377 GTTCCGGGTGCTGGTTGC 61.670 66.667 0.00 0.00 43.25 4.17
22 23 2.983592 GGTTCCGGGTGCTGGTTG 60.984 66.667 0.00 0.00 0.00 3.77
23 24 4.636435 CGGTTCCGGGTGCTGGTT 62.636 66.667 0.00 0.00 0.00 3.67
33 34 3.665675 CTGCTCCTTCCCGGTTCCG 62.666 68.421 0.00 4.08 0.00 4.30
34 35 2.245438 CTCTGCTCCTTCCCGGTTCC 62.245 65.000 0.00 0.00 0.00 3.62
35 36 1.219393 CTCTGCTCCTTCCCGGTTC 59.781 63.158 0.00 0.00 0.00 3.62
36 37 0.252103 TACTCTGCTCCTTCCCGGTT 60.252 55.000 0.00 0.00 0.00 4.44
37 38 0.684805 CTACTCTGCTCCTTCCCGGT 60.685 60.000 0.00 0.00 0.00 5.28
38 39 2.022240 GCTACTCTGCTCCTTCCCGG 62.022 65.000 0.00 0.00 0.00 5.73
39 40 1.323271 TGCTACTCTGCTCCTTCCCG 61.323 60.000 0.00 0.00 0.00 5.14
40 41 0.463620 CTGCTACTCTGCTCCTTCCC 59.536 60.000 0.00 0.00 0.00 3.97
41 42 0.179086 GCTGCTACTCTGCTCCTTCC 60.179 60.000 0.00 0.00 36.79 3.46
42 43 0.527385 CGCTGCTACTCTGCTCCTTC 60.527 60.000 0.00 0.00 37.48 3.46
43 44 1.515020 CGCTGCTACTCTGCTCCTT 59.485 57.895 0.00 0.00 37.48 3.36
44 45 2.422231 CCGCTGCTACTCTGCTCCT 61.422 63.158 0.00 0.00 37.48 3.69
45 46 2.105930 CCGCTGCTACTCTGCTCC 59.894 66.667 0.00 0.00 37.48 4.70
46 47 1.226831 GACCGCTGCTACTCTGCTC 60.227 63.158 0.00 0.00 37.48 4.26
47 48 1.680651 AGACCGCTGCTACTCTGCT 60.681 57.895 0.00 0.00 37.48 4.24
48 49 1.518133 CAGACCGCTGCTACTCTGC 60.518 63.158 0.00 0.00 34.95 4.26
49 50 0.244994 AACAGACCGCTGCTACTCTG 59.755 55.000 13.39 13.39 46.26 3.35
50 51 0.528470 GAACAGACCGCTGCTACTCT 59.472 55.000 0.00 0.00 46.26 3.24
51 52 0.798771 CGAACAGACCGCTGCTACTC 60.799 60.000 0.00 0.00 46.26 2.59
52 53 1.213013 CGAACAGACCGCTGCTACT 59.787 57.895 0.00 0.00 46.26 2.57
53 54 3.768632 CGAACAGACCGCTGCTAC 58.231 61.111 0.00 0.00 46.26 3.58
60 61 2.180769 TCGATGGCGAACAGACCG 59.819 61.111 0.00 0.00 44.78 4.79
68 69 2.761195 CGTCTCCTGTCGATGGCGA 61.761 63.158 0.00 0.00 45.71 5.54
69 70 2.278206 CGTCTCCTGTCGATGGCG 60.278 66.667 0.00 0.00 39.35 5.69
70 71 2.583593 GCGTCTCCTGTCGATGGC 60.584 66.667 0.00 0.00 0.00 4.40
71 72 2.105128 GGCGTCTCCTGTCGATGG 59.895 66.667 0.00 0.00 0.00 3.51
72 73 2.105128 GGGCGTCTCCTGTCGATG 59.895 66.667 0.00 0.00 34.39 3.84
73 74 2.362503 TGGGCGTCTCCTGTCGAT 60.363 61.111 0.00 0.00 34.39 3.59
74 75 3.371063 GTGGGCGTCTCCTGTCGA 61.371 66.667 0.00 0.00 34.39 4.20
75 76 4.436998 GGTGGGCGTCTCCTGTCG 62.437 72.222 0.00 0.00 34.39 4.35
76 77 4.436998 CGGTGGGCGTCTCCTGTC 62.437 72.222 0.00 0.00 34.39 3.51
94 95 4.115199 GCCCCTACTGGCCTGTGG 62.115 72.222 24.33 20.98 46.11 4.17
101 102 3.023832 CACCAAAATTAGCCCCTACTGG 58.976 50.000 0.00 0.00 0.00 4.00
102 103 3.697166 ACACCAAAATTAGCCCCTACTG 58.303 45.455 0.00 0.00 0.00 2.74
103 104 4.397919 AACACCAAAATTAGCCCCTACT 57.602 40.909 0.00 0.00 0.00 2.57
104 105 4.380128 CGAAACACCAAAATTAGCCCCTAC 60.380 45.833 0.00 0.00 0.00 3.18
105 106 3.759618 CGAAACACCAAAATTAGCCCCTA 59.240 43.478 0.00 0.00 0.00 3.53
106 107 2.560981 CGAAACACCAAAATTAGCCCCT 59.439 45.455 0.00 0.00 0.00 4.79
107 108 2.559231 TCGAAACACCAAAATTAGCCCC 59.441 45.455 0.00 0.00 0.00 5.80
108 109 3.571571 GTCGAAACACCAAAATTAGCCC 58.428 45.455 0.00 0.00 0.00 5.19
109 110 3.571571 GGTCGAAACACCAAAATTAGCC 58.428 45.455 0.00 0.00 36.32 3.93
110 111 3.004944 TGGGTCGAAACACCAAAATTAGC 59.995 43.478 0.00 0.00 38.32 3.09
111 112 4.839668 TGGGTCGAAACACCAAAATTAG 57.160 40.909 0.00 0.00 38.32 1.73
112 113 5.793030 AATGGGTCGAAACACCAAAATTA 57.207 34.783 3.89 0.00 38.32 1.40
113 114 4.681074 AATGGGTCGAAACACCAAAATT 57.319 36.364 3.89 0.00 38.32 1.82
114 115 4.321675 GCTAATGGGTCGAAACACCAAAAT 60.322 41.667 3.89 0.00 38.32 1.82
115 116 3.004944 GCTAATGGGTCGAAACACCAAAA 59.995 43.478 3.89 0.00 38.32 2.44
116 117 2.554893 GCTAATGGGTCGAAACACCAAA 59.445 45.455 3.89 0.00 38.32 3.28
117 118 2.156098 GCTAATGGGTCGAAACACCAA 58.844 47.619 3.89 0.00 38.32 3.67
118 119 1.816074 GCTAATGGGTCGAAACACCA 58.184 50.000 0.00 0.00 38.32 4.17
119 120 0.725117 CGCTAATGGGTCGAAACACC 59.275 55.000 0.00 0.00 35.42 4.16
120 121 1.717194 TCGCTAATGGGTCGAAACAC 58.283 50.000 0.00 0.00 0.00 3.32
121 122 2.459060 TTCGCTAATGGGTCGAAACA 57.541 45.000 0.00 0.00 38.97 2.83
122 123 2.740447 ACTTTCGCTAATGGGTCGAAAC 59.260 45.455 5.13 0.00 44.13 2.78
123 124 3.048337 ACTTTCGCTAATGGGTCGAAA 57.952 42.857 8.42 8.42 45.93 3.46
124 125 2.739913 CAACTTTCGCTAATGGGTCGAA 59.260 45.455 0.00 0.00 39.97 3.71
125 126 2.028839 TCAACTTTCGCTAATGGGTCGA 60.029 45.455 0.00 0.00 0.00 4.20
126 127 2.343101 TCAACTTTCGCTAATGGGTCG 58.657 47.619 0.00 0.00 0.00 4.79
127 128 2.096013 GCTCAACTTTCGCTAATGGGTC 59.904 50.000 0.00 0.00 0.00 4.46
128 129 2.084546 GCTCAACTTTCGCTAATGGGT 58.915 47.619 0.00 0.00 0.00 4.51
129 130 1.401905 GGCTCAACTTTCGCTAATGGG 59.598 52.381 0.00 0.00 0.00 4.00
130 131 2.083774 TGGCTCAACTTTCGCTAATGG 58.916 47.619 0.00 0.00 0.00 3.16
131 132 3.002791 TCTGGCTCAACTTTCGCTAATG 58.997 45.455 0.00 0.00 0.00 1.90
132 133 3.334583 TCTGGCTCAACTTTCGCTAAT 57.665 42.857 0.00 0.00 0.00 1.73
133 134 2.831685 TCTGGCTCAACTTTCGCTAA 57.168 45.000 0.00 0.00 0.00 3.09
134 135 2.418746 GGATCTGGCTCAACTTTCGCTA 60.419 50.000 0.00 0.00 0.00 4.26
135 136 1.677217 GGATCTGGCTCAACTTTCGCT 60.677 52.381 0.00 0.00 0.00 4.93
136 137 0.729690 GGATCTGGCTCAACTTTCGC 59.270 55.000 0.00 0.00 0.00 4.70
137 138 1.002366 CGGATCTGGCTCAACTTTCG 58.998 55.000 0.00 0.00 0.00 3.46
138 139 2.003301 GTCGGATCTGGCTCAACTTTC 58.997 52.381 0.00 0.00 0.00 2.62
139 140 1.339151 GGTCGGATCTGGCTCAACTTT 60.339 52.381 6.03 0.00 0.00 2.66
140 141 0.250513 GGTCGGATCTGGCTCAACTT 59.749 55.000 6.03 0.00 0.00 2.66
141 142 1.617947 GGGTCGGATCTGGCTCAACT 61.618 60.000 6.03 0.00 0.00 3.16
142 143 1.153349 GGGTCGGATCTGGCTCAAC 60.153 63.158 6.03 0.00 0.00 3.18
143 144 1.306141 AGGGTCGGATCTGGCTCAA 60.306 57.895 9.13 0.00 0.00 3.02
144 145 2.060383 CAGGGTCGGATCTGGCTCA 61.060 63.158 9.13 0.00 0.00 4.26
145 146 2.801631 CCAGGGTCGGATCTGGCTC 61.802 68.421 6.03 0.85 43.22 4.70
146 147 2.765807 CCAGGGTCGGATCTGGCT 60.766 66.667 6.03 0.00 43.22 4.75
149 150 0.678395 CATCTCCAGGGTCGGATCTG 59.322 60.000 0.00 0.00 33.56 2.90
150 151 1.118356 GCATCTCCAGGGTCGGATCT 61.118 60.000 0.00 0.00 33.56 2.75
151 152 1.118356 AGCATCTCCAGGGTCGGATC 61.118 60.000 0.00 0.00 33.56 3.36
152 153 0.188587 TAGCATCTCCAGGGTCGGAT 59.811 55.000 0.00 0.00 33.56 4.18
153 154 0.032515 TTAGCATCTCCAGGGTCGGA 60.033 55.000 0.00 0.00 0.00 4.55
154 155 1.051812 ATTAGCATCTCCAGGGTCGG 58.948 55.000 0.00 0.00 0.00 4.79
155 156 2.918712 AATTAGCATCTCCAGGGTCG 57.081 50.000 0.00 0.00 0.00 4.79
156 157 6.039829 CCTTAAAAATTAGCATCTCCAGGGTC 59.960 42.308 0.00 0.00 0.00 4.46
157 158 5.893824 CCTTAAAAATTAGCATCTCCAGGGT 59.106 40.000 0.00 0.00 0.00 4.34
158 159 5.893824 ACCTTAAAAATTAGCATCTCCAGGG 59.106 40.000 0.00 0.00 0.00 4.45
159 160 6.830838 AGACCTTAAAAATTAGCATCTCCAGG 59.169 38.462 0.00 0.00 0.00 4.45
160 161 7.872113 AGACCTTAAAAATTAGCATCTCCAG 57.128 36.000 0.00 0.00 0.00 3.86
161 162 9.920946 ATTAGACCTTAAAAATTAGCATCTCCA 57.079 29.630 0.00 0.00 0.00 3.86
179 180 3.872630 GCGGTTGGAAAAGGATTAGACCT 60.873 47.826 0.00 0.00 42.69 3.85
180 181 2.422479 GCGGTTGGAAAAGGATTAGACC 59.578 50.000 0.00 0.00 0.00 3.85
181 182 2.422479 GGCGGTTGGAAAAGGATTAGAC 59.578 50.000 0.00 0.00 0.00 2.59
182 183 2.040545 TGGCGGTTGGAAAAGGATTAGA 59.959 45.455 0.00 0.00 0.00 2.10
183 184 2.423538 CTGGCGGTTGGAAAAGGATTAG 59.576 50.000 0.00 0.00 0.00 1.73
184 185 2.442413 CTGGCGGTTGGAAAAGGATTA 58.558 47.619 0.00 0.00 0.00 1.75
185 186 1.256812 CTGGCGGTTGGAAAAGGATT 58.743 50.000 0.00 0.00 0.00 3.01
186 187 0.611896 CCTGGCGGTTGGAAAAGGAT 60.612 55.000 0.00 0.00 0.00 3.24
187 188 1.228429 CCTGGCGGTTGGAAAAGGA 60.228 57.895 0.00 0.00 0.00 3.36
188 189 2.275380 CCCTGGCGGTTGGAAAAGG 61.275 63.158 0.00 0.00 0.00 3.11
189 190 1.530655 ACCCTGGCGGTTGGAAAAG 60.531 57.895 0.00 0.00 45.36 2.27
190 191 2.604152 ACCCTGGCGGTTGGAAAA 59.396 55.556 0.00 0.00 45.36 2.29
198 199 4.096003 AACCATCGACCCTGGCGG 62.096 66.667 3.39 0.00 37.27 6.13
199 200 2.233605 TACAACCATCGACCCTGGCG 62.234 60.000 3.39 0.00 37.27 5.69
200 201 0.462047 CTACAACCATCGACCCTGGC 60.462 60.000 3.39 0.00 37.27 4.85
201 202 0.178068 CCTACAACCATCGACCCTGG 59.822 60.000 1.90 1.90 39.80 4.45
202 203 0.178068 CCCTACAACCATCGACCCTG 59.822 60.000 0.00 0.00 0.00 4.45
203 204 1.623542 GCCCTACAACCATCGACCCT 61.624 60.000 0.00 0.00 0.00 4.34
204 205 1.153229 GCCCTACAACCATCGACCC 60.153 63.158 0.00 0.00 0.00 4.46
205 206 0.180406 ATGCCCTACAACCATCGACC 59.820 55.000 0.00 0.00 0.00 4.79
206 207 2.480845 GTATGCCCTACAACCATCGAC 58.519 52.381 0.00 0.00 0.00 4.20
207 208 1.414919 GGTATGCCCTACAACCATCGA 59.585 52.381 0.00 0.00 32.71 3.59
208 209 1.140052 TGGTATGCCCTACAACCATCG 59.860 52.381 0.00 0.00 35.70 3.84
209 210 2.851195 CTGGTATGCCCTACAACCATC 58.149 52.381 0.00 0.00 38.18 3.51
210 211 1.133792 GCTGGTATGCCCTACAACCAT 60.134 52.381 0.00 0.00 38.18 3.55
211 212 0.254747 GCTGGTATGCCCTACAACCA 59.745 55.000 0.00 0.00 37.21 3.67
212 213 0.546598 AGCTGGTATGCCCTACAACC 59.453 55.000 0.00 0.00 32.93 3.77
213 214 2.420058 AAGCTGGTATGCCCTACAAC 57.580 50.000 0.00 0.00 31.44 3.32
214 215 2.171870 GGTAAGCTGGTATGCCCTACAA 59.828 50.000 0.00 0.00 31.44 2.41
215 216 1.766496 GGTAAGCTGGTATGCCCTACA 59.234 52.381 0.00 0.00 31.44 2.74
216 217 1.270147 CGGTAAGCTGGTATGCCCTAC 60.270 57.143 0.00 0.00 0.00 3.18
217 218 1.045407 CGGTAAGCTGGTATGCCCTA 58.955 55.000 0.00 0.00 0.00 3.53
218 219 1.830145 CGGTAAGCTGGTATGCCCT 59.170 57.895 0.00 0.00 0.00 5.19
219 220 1.892391 GCGGTAAGCTGGTATGCCC 60.892 63.158 0.00 0.00 44.04 5.36
220 221 3.732470 GCGGTAAGCTGGTATGCC 58.268 61.111 0.00 0.00 44.04 4.40
230 231 4.404098 ACGGGCCTTGGCGGTAAG 62.404 66.667 0.84 0.00 39.56 2.34
231 232 4.397832 GACGGGCCTTGGCGGTAA 62.398 66.667 0.84 0.00 41.18 2.85
247 248 1.205179 TGAATAAGTTGCCTACCGCGA 59.795 47.619 8.23 0.00 42.08 5.87
248 249 1.326548 GTGAATAAGTTGCCTACCGCG 59.673 52.381 0.00 0.00 42.08 6.46
249 250 2.352388 TGTGAATAAGTTGCCTACCGC 58.648 47.619 0.00 0.00 38.31 5.68
250 251 4.188462 TGATGTGAATAAGTTGCCTACCG 58.812 43.478 0.00 0.00 0.00 4.02
251 252 4.035675 GCTGATGTGAATAAGTTGCCTACC 59.964 45.833 0.00 0.00 0.00 3.18
252 253 4.260375 CGCTGATGTGAATAAGTTGCCTAC 60.260 45.833 0.00 0.00 0.00 3.18
253 254 3.871006 CGCTGATGTGAATAAGTTGCCTA 59.129 43.478 0.00 0.00 0.00 3.93
254 255 2.679837 CGCTGATGTGAATAAGTTGCCT 59.320 45.455 0.00 0.00 0.00 4.75
255 256 2.792542 GCGCTGATGTGAATAAGTTGCC 60.793 50.000 0.00 0.00 0.00 4.52
256 257 2.444351 GCGCTGATGTGAATAAGTTGC 58.556 47.619 0.00 0.00 0.00 4.17
257 258 2.537529 CCGCGCTGATGTGAATAAGTTG 60.538 50.000 5.56 0.00 0.00 3.16
258 259 1.665679 CCGCGCTGATGTGAATAAGTT 59.334 47.619 5.56 0.00 0.00 2.66
259 260 1.290203 CCGCGCTGATGTGAATAAGT 58.710 50.000 5.56 0.00 0.00 2.24
260 261 1.004610 CACCGCGCTGATGTGAATAAG 60.005 52.381 5.61 0.00 0.00 1.73
261 262 1.006086 CACCGCGCTGATGTGAATAA 58.994 50.000 5.61 0.00 0.00 1.40
262 263 1.428370 GCACCGCGCTGATGTGAATA 61.428 55.000 15.24 0.00 37.77 1.75
263 264 2.753966 GCACCGCGCTGATGTGAAT 61.754 57.895 15.24 0.00 37.77 2.57
264 265 3.422303 GCACCGCGCTGATGTGAA 61.422 61.111 15.24 0.00 37.77 3.18
265 266 4.678499 TGCACCGCGCTGATGTGA 62.678 61.111 15.24 0.00 43.06 3.58
266 267 4.156622 CTGCACCGCGCTGATGTG 62.157 66.667 5.61 6.84 41.88 3.21
281 282 7.701328 AACATTTTGTTTGGCAGTAGGGCTG 62.701 44.000 0.00 0.00 42.01 4.85
282 283 2.080654 TTTTGTTTGGCAGTAGGGCT 57.919 45.000 0.00 0.00 43.83 5.19
283 284 2.037121 ACATTTTGTTTGGCAGTAGGGC 59.963 45.455 0.00 0.00 43.73 5.19
284 285 4.057432 CAACATTTTGTTTGGCAGTAGGG 58.943 43.478 0.00 0.00 38.77 3.53
285 286 4.942852 TCAACATTTTGTTTGGCAGTAGG 58.057 39.130 0.00 0.00 38.77 3.18
286 287 7.370383 ACTATCAACATTTTGTTTGGCAGTAG 58.630 34.615 0.00 0.00 38.77 2.57
287 288 7.230510 AGACTATCAACATTTTGTTTGGCAGTA 59.769 33.333 0.00 0.00 38.77 2.74
288 289 6.040842 AGACTATCAACATTTTGTTTGGCAGT 59.959 34.615 0.00 0.00 38.77 4.40
289 290 6.364165 CAGACTATCAACATTTTGTTTGGCAG 59.636 38.462 0.00 0.00 38.77 4.85
290 291 6.183360 ACAGACTATCAACATTTTGTTTGGCA 60.183 34.615 0.00 0.00 38.77 4.92
291 292 6.144402 CACAGACTATCAACATTTTGTTTGGC 59.856 38.462 0.00 0.00 38.77 4.52
292 293 6.144402 GCACAGACTATCAACATTTTGTTTGG 59.856 38.462 0.00 0.00 38.77 3.28
293 294 6.696583 TGCACAGACTATCAACATTTTGTTTG 59.303 34.615 0.00 0.00 38.77 2.93
294 295 6.804677 TGCACAGACTATCAACATTTTGTTT 58.195 32.000 0.00 0.00 38.77 2.83
295 296 6.389830 TGCACAGACTATCAACATTTTGTT 57.610 33.333 0.00 0.00 42.08 2.83
296 297 6.208644 GTTGCACAGACTATCAACATTTTGT 58.791 36.000 0.00 0.00 38.78 2.83
297 298 5.630680 GGTTGCACAGACTATCAACATTTTG 59.369 40.000 12.64 0.00 40.20 2.44
298 299 5.278957 GGGTTGCACAGACTATCAACATTTT 60.279 40.000 12.64 0.00 40.20 1.82
299 300 4.218417 GGGTTGCACAGACTATCAACATTT 59.782 41.667 12.64 0.00 40.20 2.32
300 301 3.758554 GGGTTGCACAGACTATCAACATT 59.241 43.478 12.64 0.00 40.20 2.71
301 302 3.009473 AGGGTTGCACAGACTATCAACAT 59.991 43.478 12.64 2.53 40.20 2.71
302 303 2.371841 AGGGTTGCACAGACTATCAACA 59.628 45.455 12.64 0.00 40.20 3.33
303 304 3.059352 AGGGTTGCACAGACTATCAAC 57.941 47.619 0.00 0.00 38.36 3.18
304 305 3.055385 GGTAGGGTTGCACAGACTATCAA 60.055 47.826 0.00 0.00 0.00 2.57
305 306 2.500098 GGTAGGGTTGCACAGACTATCA 59.500 50.000 0.00 0.00 0.00 2.15
306 307 2.481449 CGGTAGGGTTGCACAGACTATC 60.481 54.545 0.00 0.00 0.00 2.08
307 308 1.480954 CGGTAGGGTTGCACAGACTAT 59.519 52.381 0.00 0.00 0.00 2.12
308 309 0.892755 CGGTAGGGTTGCACAGACTA 59.107 55.000 0.00 0.00 0.00 2.59
309 310 1.671742 CGGTAGGGTTGCACAGACT 59.328 57.895 0.00 0.00 0.00 3.24
310 311 2.033194 GCGGTAGGGTTGCACAGAC 61.033 63.158 0.00 0.00 0.00 3.51
311 312 2.345991 GCGGTAGGGTTGCACAGA 59.654 61.111 0.00 0.00 0.00 3.41
312 313 2.746277 GGCGGTAGGGTTGCACAG 60.746 66.667 0.00 0.00 0.00 3.66
313 314 4.690719 CGGCGGTAGGGTTGCACA 62.691 66.667 0.00 0.00 0.00 4.57
314 315 4.382320 TCGGCGGTAGGGTTGCAC 62.382 66.667 7.21 0.00 0.00 4.57
315 316 4.077184 CTCGGCGGTAGGGTTGCA 62.077 66.667 7.21 0.00 0.00 4.08
316 317 4.832608 CCTCGGCGGTAGGGTTGC 62.833 72.222 7.21 0.00 0.00 4.17
317 318 3.387947 ACCTCGGCGGTAGGGTTG 61.388 66.667 17.66 0.00 46.73 3.77
318 319 3.387947 CACCTCGGCGGTAGGGTT 61.388 66.667 17.66 0.00 46.94 4.11
333 334 4.778143 CCACCTACCGCTGGGCAC 62.778 72.222 0.00 0.00 36.48 5.01
337 338 2.728435 GGTACCCACCTACCGCTGG 61.728 68.421 0.00 0.00 42.11 4.85
338 339 1.956629 CTGGTACCCACCTACCGCTG 61.957 65.000 10.07 0.00 45.98 5.18
339 340 1.684734 CTGGTACCCACCTACCGCT 60.685 63.158 10.07 0.00 45.98 5.52
340 341 2.897972 CTGGTACCCACCTACCGC 59.102 66.667 10.07 0.00 45.98 5.68
341 342 1.335132 ATGCTGGTACCCACCTACCG 61.335 60.000 10.07 0.00 45.98 4.02
342 343 0.916809 AATGCTGGTACCCACCTACC 59.083 55.000 10.07 0.00 45.98 3.18
343 344 1.280998 ACAATGCTGGTACCCACCTAC 59.719 52.381 10.07 0.00 45.98 3.18
344 345 1.663911 ACAATGCTGGTACCCACCTA 58.336 50.000 10.07 0.00 45.98 3.08
345 346 1.663911 TACAATGCTGGTACCCACCT 58.336 50.000 10.07 0.00 45.98 4.00
346 347 2.729028 ATACAATGCTGGTACCCACC 57.271 50.000 10.07 0.00 46.00 4.61
347 348 4.013728 TCAAATACAATGCTGGTACCCAC 58.986 43.478 10.07 1.38 0.00 4.61
348 349 4.308526 TCAAATACAATGCTGGTACCCA 57.691 40.909 10.07 0.63 0.00 4.51
349 350 6.062095 AGTATCAAATACAATGCTGGTACCC 58.938 40.000 10.07 0.00 38.21 3.69
350 351 7.568199 AAGTATCAAATACAATGCTGGTACC 57.432 36.000 4.43 4.43 38.21 3.34
351 352 9.542462 TCTAAGTATCAAATACAATGCTGGTAC 57.458 33.333 0.39 0.00 38.21 3.34
352 353 9.542462 GTCTAAGTATCAAATACAATGCTGGTA 57.458 33.333 0.39 0.00 38.21 3.25
353 354 8.046708 TGTCTAAGTATCAAATACAATGCTGGT 58.953 33.333 0.39 0.00 38.21 4.00
354 355 8.437360 TGTCTAAGTATCAAATACAATGCTGG 57.563 34.615 0.39 0.00 38.21 4.85
355 356 9.874215 CATGTCTAAGTATCAAATACAATGCTG 57.126 33.333 0.39 0.00 38.21 4.41
356 357 9.618890 ACATGTCTAAGTATCAAATACAATGCT 57.381 29.630 0.00 0.00 38.21 3.79
362 363 9.210426 CGCAAAACATGTCTAAGTATCAAATAC 57.790 33.333 0.00 0.00 35.99 1.89
363 364 8.394877 CCGCAAAACATGTCTAAGTATCAAATA 58.605 33.333 0.00 0.00 0.00 1.40
364 365 7.094377 ACCGCAAAACATGTCTAAGTATCAAAT 60.094 33.333 0.00 0.00 0.00 2.32
365 366 6.205853 ACCGCAAAACATGTCTAAGTATCAAA 59.794 34.615 0.00 0.00 0.00 2.69
366 367 5.703592 ACCGCAAAACATGTCTAAGTATCAA 59.296 36.000 0.00 0.00 0.00 2.57
367 368 5.242434 ACCGCAAAACATGTCTAAGTATCA 58.758 37.500 0.00 0.00 0.00 2.15
368 369 5.796350 ACCGCAAAACATGTCTAAGTATC 57.204 39.130 0.00 0.00 0.00 2.24
369 370 6.315393 CCTTACCGCAAAACATGTCTAAGTAT 59.685 38.462 0.00 0.00 0.00 2.12
370 371 5.640357 CCTTACCGCAAAACATGTCTAAGTA 59.360 40.000 0.00 0.00 0.00 2.24
371 372 4.454504 CCTTACCGCAAAACATGTCTAAGT 59.545 41.667 0.00 0.00 0.00 2.24
372 373 4.671766 GCCTTACCGCAAAACATGTCTAAG 60.672 45.833 0.00 0.00 0.00 2.18
373 374 3.189702 GCCTTACCGCAAAACATGTCTAA 59.810 43.478 0.00 0.00 0.00 2.10
374 375 2.745281 GCCTTACCGCAAAACATGTCTA 59.255 45.455 0.00 0.00 0.00 2.59
375 376 1.539827 GCCTTACCGCAAAACATGTCT 59.460 47.619 0.00 0.00 0.00 3.41
376 377 1.727857 CGCCTTACCGCAAAACATGTC 60.728 52.381 0.00 0.00 0.00 3.06
377 378 0.239879 CGCCTTACCGCAAAACATGT 59.760 50.000 0.00 0.00 0.00 3.21
378 379 0.239879 ACGCCTTACCGCAAAACATG 59.760 50.000 0.00 0.00 0.00 3.21
379 380 0.239879 CACGCCTTACCGCAAAACAT 59.760 50.000 0.00 0.00 0.00 2.71
380 381 1.649815 CACGCCTTACCGCAAAACA 59.350 52.632 0.00 0.00 0.00 2.83
381 382 1.728074 GCACGCCTTACCGCAAAAC 60.728 57.895 0.00 0.00 0.00 2.43
382 383 1.725557 TTGCACGCCTTACCGCAAAA 61.726 50.000 0.00 0.00 41.14 2.44
383 384 2.187493 TTGCACGCCTTACCGCAAA 61.187 52.632 0.00 0.00 41.14 3.68
384 385 2.592001 TTGCACGCCTTACCGCAA 60.592 55.556 0.00 0.00 41.79 4.85
385 386 3.350612 GTTGCACGCCTTACCGCA 61.351 61.111 0.00 0.00 0.00 5.69
386 387 4.097863 GGTTGCACGCCTTACCGC 62.098 66.667 0.00 0.00 0.00 5.68
387 388 0.741574 TATGGTTGCACGCCTTACCG 60.742 55.000 7.86 0.00 33.29 4.02
388 389 0.730840 GTATGGTTGCACGCCTTACC 59.269 55.000 15.87 8.23 33.23 2.85
389 390 0.730840 GGTATGGTTGCACGCCTTAC 59.269 55.000 17.39 17.39 36.48 2.34
390 391 0.741574 CGGTATGGTTGCACGCCTTA 60.742 55.000 7.86 3.65 0.00 2.69
391 392 2.038269 CGGTATGGTTGCACGCCTT 61.038 57.895 7.86 4.51 0.00 4.35
392 393 2.435938 CGGTATGGTTGCACGCCT 60.436 61.111 7.86 0.00 0.00 5.52
393 394 2.744709 ACGGTATGGTTGCACGCC 60.745 61.111 0.00 0.00 0.00 5.68
394 395 1.570347 TTCACGGTATGGTTGCACGC 61.570 55.000 0.00 0.00 0.00 5.34
395 396 0.442310 CTTCACGGTATGGTTGCACG 59.558 55.000 0.00 0.00 0.00 5.34
396 397 0.802494 CCTTCACGGTATGGTTGCAC 59.198 55.000 0.00 0.00 0.00 4.57
397 398 0.322098 CCCTTCACGGTATGGTTGCA 60.322 55.000 0.00 0.00 0.00 4.08
398 399 1.654023 GCCCTTCACGGTATGGTTGC 61.654 60.000 0.00 0.00 0.00 4.17
399 400 1.029947 GGCCCTTCACGGTATGGTTG 61.030 60.000 0.00 0.00 0.00 3.77
400 401 1.205460 AGGCCCTTCACGGTATGGTT 61.205 55.000 0.00 0.00 0.00 3.67
401 402 1.615424 AGGCCCTTCACGGTATGGT 60.615 57.895 0.00 0.00 0.00 3.55
402 403 1.146263 GAGGCCCTTCACGGTATGG 59.854 63.158 0.00 0.00 0.00 2.74
403 404 1.227263 CGAGGCCCTTCACGGTATG 60.227 63.158 0.00 0.00 0.00 2.39
404 405 1.380785 TCGAGGCCCTTCACGGTAT 60.381 57.895 0.00 0.00 0.00 2.73
405 406 2.036098 TCGAGGCCCTTCACGGTA 59.964 61.111 0.00 0.00 0.00 4.02
406 407 3.692406 GTCGAGGCCCTTCACGGT 61.692 66.667 0.00 0.00 0.00 4.83
407 408 4.796231 CGTCGAGGCCCTTCACGG 62.796 72.222 0.00 0.00 0.00 4.94
408 409 1.721664 TATCGTCGAGGCCCTTCACG 61.722 60.000 0.00 8.70 0.00 4.35
409 410 0.030908 CTATCGTCGAGGCCCTTCAC 59.969 60.000 0.00 0.00 0.00 3.18
410 411 1.107538 CCTATCGTCGAGGCCCTTCA 61.108 60.000 0.00 0.00 0.00 3.02
411 412 1.660917 CCTATCGTCGAGGCCCTTC 59.339 63.158 0.00 0.00 0.00 3.46
412 413 3.857764 CCTATCGTCGAGGCCCTT 58.142 61.111 0.00 0.00 0.00 3.95
417 418 3.119919 GGTATAACTGCCTATCGTCGAGG 60.120 52.174 0.00 0.00 37.12 4.63
418 419 3.119919 GGGTATAACTGCCTATCGTCGAG 60.120 52.174 0.00 0.00 0.00 4.04
419 420 2.816087 GGGTATAACTGCCTATCGTCGA 59.184 50.000 0.00 0.00 0.00 4.20
420 421 2.818432 AGGGTATAACTGCCTATCGTCG 59.182 50.000 0.00 0.00 0.00 5.12
421 422 4.157472 GGTAGGGTATAACTGCCTATCGTC 59.843 50.000 5.81 0.00 37.68 4.20
422 423 4.085009 GGTAGGGTATAACTGCCTATCGT 58.915 47.826 5.81 0.00 37.68 3.73
423 424 3.128242 CGGTAGGGTATAACTGCCTATCG 59.872 52.174 0.00 0.00 38.41 2.92
424 425 4.157472 GTCGGTAGGGTATAACTGCCTATC 59.843 50.000 9.93 0.00 38.41 2.08
425 426 4.085009 GTCGGTAGGGTATAACTGCCTAT 58.915 47.826 9.93 0.00 38.41 2.57
426 427 3.117550 TGTCGGTAGGGTATAACTGCCTA 60.118 47.826 9.93 0.00 38.41 3.93
427 428 2.314246 GTCGGTAGGGTATAACTGCCT 58.686 52.381 9.93 0.00 38.41 4.75
428 429 2.034124 TGTCGGTAGGGTATAACTGCC 58.966 52.381 3.57 3.57 37.36 4.85
429 430 3.611057 CGATGTCGGTAGGGTATAACTGC 60.611 52.174 0.00 0.00 35.37 4.40
430 431 3.817084 TCGATGTCGGTAGGGTATAACTG 59.183 47.826 2.25 0.00 40.29 3.16
431 432 3.817647 GTCGATGTCGGTAGGGTATAACT 59.182 47.826 2.25 0.00 40.29 2.24
432 433 3.057946 GGTCGATGTCGGTAGGGTATAAC 60.058 52.174 2.25 0.00 40.29 1.89
433 434 3.149196 GGTCGATGTCGGTAGGGTATAA 58.851 50.000 2.25 0.00 40.29 0.98
434 435 2.553028 GGGTCGATGTCGGTAGGGTATA 60.553 54.545 2.25 0.00 40.29 1.47
435 436 1.613836 GGTCGATGTCGGTAGGGTAT 58.386 55.000 2.25 0.00 40.29 2.73
436 437 0.466189 GGGTCGATGTCGGTAGGGTA 60.466 60.000 2.25 0.00 40.29 3.69
437 438 1.755783 GGGTCGATGTCGGTAGGGT 60.756 63.158 2.25 0.00 40.29 4.34
438 439 2.496291 GGGGTCGATGTCGGTAGGG 61.496 68.421 2.25 0.00 40.29 3.53
439 440 2.842256 CGGGGTCGATGTCGGTAGG 61.842 68.421 2.25 0.00 40.29 3.18
440 441 1.820906 TCGGGGTCGATGTCGGTAG 60.821 63.158 2.25 0.00 40.88 3.18
441 442 2.271821 TCGGGGTCGATGTCGGTA 59.728 61.111 2.25 0.00 40.88 4.02
484 485 7.707624 TGCCAGATTTGACTCTGATATTTTT 57.292 32.000 2.73 0.00 44.48 1.94
485 486 7.893124 ATGCCAGATTTGACTCTGATATTTT 57.107 32.000 2.73 0.00 44.48 1.82
486 487 8.844244 GTTATGCCAGATTTGACTCTGATATTT 58.156 33.333 2.73 0.00 44.48 1.40
487 488 8.216423 AGTTATGCCAGATTTGACTCTGATATT 58.784 33.333 2.73 0.00 44.48 1.28
488 489 7.743749 AGTTATGCCAGATTTGACTCTGATAT 58.256 34.615 2.73 0.49 44.48 1.63
489 490 7.129457 AGTTATGCCAGATTTGACTCTGATA 57.871 36.000 2.73 0.00 44.48 2.15
490 491 5.999044 AGTTATGCCAGATTTGACTCTGAT 58.001 37.500 2.73 0.00 44.48 2.90
491 492 5.426689 AGTTATGCCAGATTTGACTCTGA 57.573 39.130 2.73 0.00 44.48 3.27
492 493 6.506500 AAAGTTATGCCAGATTTGACTCTG 57.493 37.500 0.00 0.00 41.93 3.35
493 494 5.352569 CGAAAGTTATGCCAGATTTGACTCT 59.647 40.000 0.00 0.00 0.00 3.24
494 495 5.563842 CGAAAGTTATGCCAGATTTGACTC 58.436 41.667 0.00 0.00 0.00 3.36
495 496 4.142600 GCGAAAGTTATGCCAGATTTGACT 60.143 41.667 0.00 0.00 0.00 3.41
496 497 4.098416 GCGAAAGTTATGCCAGATTTGAC 58.902 43.478 0.00 0.00 0.00 3.18
497 498 3.755905 TGCGAAAGTTATGCCAGATTTGA 59.244 39.130 0.00 0.00 0.00 2.69
498 499 4.095410 TGCGAAAGTTATGCCAGATTTG 57.905 40.909 0.00 0.00 0.00 2.32
499 500 4.782019 TTGCGAAAGTTATGCCAGATTT 57.218 36.364 0.00 0.00 0.00 2.17
500 501 4.782019 TTTGCGAAAGTTATGCCAGATT 57.218 36.364 0.00 0.00 0.00 2.40
501 502 4.782019 TTTTGCGAAAGTTATGCCAGAT 57.218 36.364 0.00 0.00 0.00 2.90
502 503 4.217334 TCATTTTGCGAAAGTTATGCCAGA 59.783 37.500 5.18 0.00 0.00 3.86
503 504 4.484236 TCATTTTGCGAAAGTTATGCCAG 58.516 39.130 5.18 0.00 0.00 4.85
504 505 4.511617 TCATTTTGCGAAAGTTATGCCA 57.488 36.364 5.18 0.00 0.00 4.92
505 506 7.518731 TTAATCATTTTGCGAAAGTTATGCC 57.481 32.000 5.18 0.00 0.00 4.40
506 507 9.249844 GTTTTAATCATTTTGCGAAAGTTATGC 57.750 29.630 5.18 0.00 0.00 3.14
509 510 8.756864 GGTGTTTTAATCATTTTGCGAAAGTTA 58.243 29.630 5.18 2.17 0.00 2.24
510 511 7.515998 CGGTGTTTTAATCATTTTGCGAAAGTT 60.516 33.333 5.18 3.05 0.00 2.66
511 512 6.074569 CGGTGTTTTAATCATTTTGCGAAAGT 60.075 34.615 5.18 0.00 0.00 2.66
512 513 6.143118 TCGGTGTTTTAATCATTTTGCGAAAG 59.857 34.615 5.18 0.00 0.00 2.62
513 514 5.977725 TCGGTGTTTTAATCATTTTGCGAAA 59.022 32.000 0.53 0.53 0.00 3.46
514 515 5.520632 TCGGTGTTTTAATCATTTTGCGAA 58.479 33.333 0.00 0.00 0.00 4.70
515 516 5.109662 TCGGTGTTTTAATCATTTTGCGA 57.890 34.783 0.00 0.00 0.00 5.10
516 517 5.814314 TTCGGTGTTTTAATCATTTTGCG 57.186 34.783 0.00 0.00 0.00 4.85
517 518 9.739786 CTAAATTCGGTGTTTTAATCATTTTGC 57.260 29.630 0.00 0.00 0.00 3.68
518 519 9.739786 GCTAAATTCGGTGTTTTAATCATTTTG 57.260 29.630 0.00 0.00 0.00 2.44
519 520 8.931775 GGCTAAATTCGGTGTTTTAATCATTTT 58.068 29.630 0.00 0.00 0.00 1.82
520 521 7.274686 CGGCTAAATTCGGTGTTTTAATCATTT 59.725 33.333 0.00 0.00 0.00 2.32
521 522 6.750039 CGGCTAAATTCGGTGTTTTAATCATT 59.250 34.615 0.00 0.00 0.00 2.57
522 523 6.262601 CGGCTAAATTCGGTGTTTTAATCAT 58.737 36.000 0.00 0.00 0.00 2.45
523 524 5.632959 CGGCTAAATTCGGTGTTTTAATCA 58.367 37.500 0.00 0.00 0.00 2.57
524 525 4.497966 GCGGCTAAATTCGGTGTTTTAATC 59.502 41.667 0.00 0.00 0.00 1.75
525 526 4.417506 GCGGCTAAATTCGGTGTTTTAAT 58.582 39.130 0.00 0.00 0.00 1.40
526 527 3.366171 GGCGGCTAAATTCGGTGTTTTAA 60.366 43.478 0.00 0.00 0.00 1.52
527 528 2.162008 GGCGGCTAAATTCGGTGTTTTA 59.838 45.455 0.00 0.00 0.00 1.52
528 529 1.068125 GGCGGCTAAATTCGGTGTTTT 60.068 47.619 0.00 0.00 0.00 2.43
529 530 0.524414 GGCGGCTAAATTCGGTGTTT 59.476 50.000 0.00 0.00 0.00 2.83
530 531 1.641123 CGGCGGCTAAATTCGGTGTT 61.641 55.000 7.61 0.00 0.00 3.32
531 532 2.104253 CGGCGGCTAAATTCGGTGT 61.104 57.895 7.61 0.00 0.00 4.16
532 533 2.707039 CGGCGGCTAAATTCGGTG 59.293 61.111 7.61 0.00 0.00 4.94
533 534 2.512974 CCGGCGGCTAAATTCGGT 60.513 61.111 15.42 0.00 36.38 4.69
534 535 3.276846 CCCGGCGGCTAAATTCGG 61.277 66.667 23.20 2.81 40.32 4.30
535 536 2.202960 TCCCGGCGGCTAAATTCG 60.203 61.111 23.20 4.00 0.00 3.34
536 537 1.892391 CCTCCCGGCGGCTAAATTC 60.892 63.158 23.20 0.00 0.00 2.17
537 538 2.192175 CCTCCCGGCGGCTAAATT 59.808 61.111 23.20 0.00 0.00 1.82
579 580 1.518352 CGCATCGATCGGTTGGTCA 60.518 57.895 16.41 0.00 0.00 4.02
599 600 2.524394 AGGTCAGAGTGGGCGTGT 60.524 61.111 0.00 0.00 0.00 4.49
642 644 1.153489 CAGGTGAGCCAGTGATCGG 60.153 63.158 0.00 0.00 37.19 4.18
668 670 4.111916 CTCGCTTGATTTCTTCTCCTCTC 58.888 47.826 0.00 0.00 0.00 3.20
669 671 3.678529 GCTCGCTTGATTTCTTCTCCTCT 60.679 47.826 0.00 0.00 0.00 3.69
670 672 2.607180 GCTCGCTTGATTTCTTCTCCTC 59.393 50.000 0.00 0.00 0.00 3.71
671 673 2.626840 GCTCGCTTGATTTCTTCTCCT 58.373 47.619 0.00 0.00 0.00 3.69
672 674 1.325943 CGCTCGCTTGATTTCTTCTCC 59.674 52.381 0.00 0.00 0.00 3.71
839 845 4.767255 CTGTCTGTCTGCCGGCCC 62.767 72.222 26.77 12.70 0.00 5.80
1129 1190 2.736826 CGAAGCCCCTCTTCCCTCC 61.737 68.421 0.00 0.00 46.60 4.30
1131 1192 2.689034 CCGAAGCCCCTCTTCCCT 60.689 66.667 0.00 0.00 46.60 4.20
1338 1411 1.303643 GCCCTCCTTCCACACCTTG 60.304 63.158 0.00 0.00 0.00 3.61
1476 1549 1.135315 CACCATCTCGCCGCTTTTG 59.865 57.895 0.00 0.00 0.00 2.44
1477 1550 2.040544 CCACCATCTCGCCGCTTTT 61.041 57.895 0.00 0.00 0.00 2.27
1478 1551 2.436646 CCACCATCTCGCCGCTTT 60.437 61.111 0.00 0.00 0.00 3.51
1479 1552 3.665675 GACCACCATCTCGCCGCTT 62.666 63.158 0.00 0.00 0.00 4.68
1480 1553 4.148825 GACCACCATCTCGCCGCT 62.149 66.667 0.00 0.00 0.00 5.52
1500 1582 4.233635 CCGTCGGCGTCCTCGTAG 62.234 72.222 9.28 0.00 39.49 3.51
1557 1639 3.865571 TGGGAGATGGAGATGATGATGA 58.134 45.455 0.00 0.00 0.00 2.92
1567 1649 3.393609 TGAAATGGAGATGGGAGATGGAG 59.606 47.826 0.00 0.00 0.00 3.86
1568 1650 3.396565 TGAAATGGAGATGGGAGATGGA 58.603 45.455 0.00 0.00 0.00 3.41
1569 1651 3.870538 TGAAATGGAGATGGGAGATGG 57.129 47.619 0.00 0.00 0.00 3.51
1580 1662 8.667076 AGGATTTTGTTTTCTTTGAAATGGAG 57.333 30.769 0.00 0.00 0.00 3.86
1635 1726 2.277969 CATCACAGCAGGATGTCAGTC 58.722 52.381 4.62 0.00 39.31 3.51
1648 1739 3.316029 TGCAGAAAAAGACACCATCACAG 59.684 43.478 0.00 0.00 0.00 3.66
1653 1744 2.158475 TCCCTGCAGAAAAAGACACCAT 60.158 45.455 17.39 0.00 0.00 3.55
1656 1747 4.550422 GAAATCCCTGCAGAAAAAGACAC 58.450 43.478 17.39 0.00 0.00 3.67
1661 1752 1.068610 CGCGAAATCCCTGCAGAAAAA 60.069 47.619 17.39 0.00 0.00 1.94
1684 1775 0.319555 TCTTGAGGCGTTTCACCGAG 60.320 55.000 0.00 0.00 0.00 4.63
1729 1820 4.908601 TTCTCAAAATCTAGGAGTGCCA 57.091 40.909 0.00 0.00 36.29 4.92
1736 1827 8.127150 AGGGAAAACATTTCTCAAAATCTAGG 57.873 34.615 5.58 0.00 32.69 3.02
1758 1849 5.555017 TGAAATCTCACAGAAGAGAAAGGG 58.445 41.667 0.00 0.00 46.81 3.95
1785 1877 0.844660 AGCCAGTGAGGATGCATCAT 59.155 50.000 27.25 21.75 41.22 2.45
1786 1878 2.304069 AGCCAGTGAGGATGCATCA 58.696 52.632 27.25 6.72 41.22 3.07
1873 1970 4.161754 GGAGAGAAAACGGGAGAAAGGATA 59.838 45.833 0.00 0.00 0.00 2.59
1874 1971 3.055021 GGAGAGAAAACGGGAGAAAGGAT 60.055 47.826 0.00 0.00 0.00 3.24
1875 1972 2.302157 GGAGAGAAAACGGGAGAAAGGA 59.698 50.000 0.00 0.00 0.00 3.36
1876 1973 2.615747 GGGAGAGAAAACGGGAGAAAGG 60.616 54.545 0.00 0.00 0.00 3.11
1878 1975 2.051692 TGGGAGAGAAAACGGGAGAAA 58.948 47.619 0.00 0.00 0.00 2.52
1881 1978 2.552743 GTTTTGGGAGAGAAAACGGGAG 59.447 50.000 0.00 0.00 34.53 4.30
1899 1996 2.722071 CCGCAACATGTTTACACGTTT 58.278 42.857 8.77 0.00 28.99 3.60
1934 2031 5.197451 ACTGAGACTGTATTCTGGTAGGAG 58.803 45.833 0.00 0.00 0.00 3.69
1938 2035 5.773176 TGACAACTGAGACTGTATTCTGGTA 59.227 40.000 0.00 0.00 0.00 3.25
1963 2060 4.384208 CCCTTTTCCATAGGGTAGACAGTG 60.384 50.000 0.00 0.00 46.16 3.66
1978 2075 4.256110 CAGAATTGAATTGGCCCTTTTCC 58.744 43.478 0.00 0.00 0.00 3.13
1996 2093 6.093633 CAGAGCATGAATCAATCAGAACAGAA 59.906 38.462 0.00 0.00 42.53 3.02
2001 2098 5.493809 TGACAGAGCATGAATCAATCAGAA 58.506 37.500 0.00 0.00 42.53 3.02
2003 2100 5.116882 TCTGACAGAGCATGAATCAATCAG 58.883 41.667 17.14 17.14 42.53 2.90
2004 2101 5.093849 TCTGACAGAGCATGAATCAATCA 57.906 39.130 0.00 1.16 43.67 2.57
2005 2102 5.758784 TGATCTGACAGAGCATGAATCAATC 59.241 40.000 19.16 3.58 35.46 2.67
2008 2105 4.404715 TCTGATCTGACAGAGCATGAATCA 59.595 41.667 22.81 12.23 40.17 2.57
2009 2106 4.946445 TCTGATCTGACAGAGCATGAATC 58.054 43.478 22.81 8.28 40.17 2.52
2054 2154 3.559238 TTGAGAAAAGAAATCAGCCGC 57.441 42.857 0.00 0.00 0.00 6.53
2056 2156 5.649782 TCCATTGAGAAAAGAAATCAGCC 57.350 39.130 0.00 0.00 0.00 4.85
2073 2173 2.446435 CTGTCCGGTTCCAATTCCATT 58.554 47.619 0.00 0.00 0.00 3.16
2080 2180 2.747686 GAGCCTGTCCGGTTCCAA 59.252 61.111 0.00 0.00 37.06 3.53
2081 2181 3.691342 CGAGCCTGTCCGGTTCCA 61.691 66.667 0.00 0.00 39.67 3.53
2082 2182 2.240162 AATCGAGCCTGTCCGGTTCC 62.240 60.000 0.00 0.00 39.67 3.62
2084 2184 0.673644 CAAATCGAGCCTGTCCGGTT 60.674 55.000 0.00 0.00 34.25 4.44
2085 2185 1.079127 CAAATCGAGCCTGTCCGGT 60.079 57.895 0.00 0.00 34.25 5.28
2087 2187 0.389817 TGACAAATCGAGCCTGTCCG 60.390 55.000 17.03 0.00 38.97 4.79
2165 2265 8.575649 TCTGACCGAGCATAATAATAGTATGA 57.424 34.615 11.38 0.00 31.71 2.15
2170 2270 7.009999 GCAGAATCTGACCGAGCATAATAATAG 59.990 40.741 15.38 0.00 32.44 1.73
2171 2271 6.813649 GCAGAATCTGACCGAGCATAATAATA 59.186 38.462 15.38 0.00 32.44 0.98
2172 2272 5.641209 GCAGAATCTGACCGAGCATAATAAT 59.359 40.000 15.38 0.00 32.44 1.28
2173 2273 4.991056 GCAGAATCTGACCGAGCATAATAA 59.009 41.667 15.38 0.00 32.44 1.40
2210 2310 0.673644 CCCCGTCAGGTCACATTCAC 60.674 60.000 0.00 0.00 35.12 3.18
2242 2342 0.107654 CCACACCGATCCTCCTTTCC 60.108 60.000 0.00 0.00 0.00 3.13
2287 2387 1.325037 CACAAGTCGCAACACAACGTA 59.675 47.619 0.00 0.00 0.00 3.57
2288 2388 0.096281 CACAAGTCGCAACACAACGT 59.904 50.000 0.00 0.00 0.00 3.99
2290 2390 1.129624 TGTCACAAGTCGCAACACAAC 59.870 47.619 0.00 0.00 0.00 3.32
2292 2392 1.006086 CTGTCACAAGTCGCAACACA 58.994 50.000 0.00 0.00 0.00 3.72
2293 2393 0.316196 GCTGTCACAAGTCGCAACAC 60.316 55.000 0.00 0.00 0.00 3.32
2294 2394 1.436195 GGCTGTCACAAGTCGCAACA 61.436 55.000 0.00 0.00 0.00 3.33
2295 2395 1.160329 AGGCTGTCACAAGTCGCAAC 61.160 55.000 0.00 0.00 0.00 4.17
2297 2397 1.146041 AAGGCTGTCACAAGTCGCA 59.854 52.632 0.00 0.00 0.00 5.10
2298 2398 1.571460 CAAGGCTGTCACAAGTCGC 59.429 57.895 0.00 0.00 0.00 5.19
2299 2399 1.230635 CCCAAGGCTGTCACAAGTCG 61.231 60.000 0.00 0.00 0.00 4.18
2301 2401 0.258774 AACCCAAGGCTGTCACAAGT 59.741 50.000 0.00 0.00 0.00 3.16
2302 2402 1.067516 CAAACCCAAGGCTGTCACAAG 59.932 52.381 0.00 0.00 0.00 3.16
2304 2404 0.754957 CCAAACCCAAGGCTGTCACA 60.755 55.000 0.00 0.00 0.00 3.58
2305 2405 0.467290 TCCAAACCCAAGGCTGTCAC 60.467 55.000 0.00 0.00 0.00 3.67
2306 2406 0.260230 TTCCAAACCCAAGGCTGTCA 59.740 50.000 0.00 0.00 0.00 3.58
2307 2407 0.961753 CTTCCAAACCCAAGGCTGTC 59.038 55.000 0.00 0.00 0.00 3.51
2308 2408 0.555769 TCTTCCAAACCCAAGGCTGT 59.444 50.000 0.00 0.00 0.00 4.40
2309 2409 1.703411 TTCTTCCAAACCCAAGGCTG 58.297 50.000 0.00 0.00 0.00 4.85
2310 2410 2.319844 CTTTCTTCCAAACCCAAGGCT 58.680 47.619 0.00 0.00 0.00 4.58
2311 2411 1.270305 GCTTTCTTCCAAACCCAAGGC 60.270 52.381 0.00 0.00 0.00 4.35
2312 2412 2.319844 AGCTTTCTTCCAAACCCAAGG 58.680 47.619 0.00 0.00 0.00 3.61
2313 2413 3.384467 TGAAGCTTTCTTCCAAACCCAAG 59.616 43.478 0.00 0.00 46.28 3.61
2349 2449 9.736414 TTTAGCTATCTATACTACCGTTGATCT 57.264 33.333 0.00 0.00 0.00 2.75
2357 2457 7.920160 ACCGTCTTTAGCTATCTATACTACC 57.080 40.000 0.00 0.00 0.00 3.18
2358 2458 8.591312 CGTACCGTCTTTAGCTATCTATACTAC 58.409 40.741 0.00 0.00 0.00 2.73
2362 2462 5.934043 TGCGTACCGTCTTTAGCTATCTATA 59.066 40.000 0.00 0.00 0.00 1.31
2363 2463 4.758674 TGCGTACCGTCTTTAGCTATCTAT 59.241 41.667 0.00 0.00 0.00 1.98
2379 2479 0.323087 ATCCCAAAAGGGTGCGTACC 60.323 55.000 15.14 15.14 46.76 3.34
2403 2503 6.320434 AGAATCCCAAAAGGGTTTCAAAAA 57.680 33.333 20.62 0.00 39.95 1.94
2404 2504 5.966853 AGAATCCCAAAAGGGTTTCAAAA 57.033 34.783 20.62 0.00 39.95 2.44
2405 2505 5.665360 AGAAGAATCCCAAAAGGGTTTCAAA 59.335 36.000 20.62 0.00 39.95 2.69
2406 2506 5.215845 AGAAGAATCCCAAAAGGGTTTCAA 58.784 37.500 20.62 0.00 39.95 2.69
2407 2507 4.814967 AGAAGAATCCCAAAAGGGTTTCA 58.185 39.130 20.62 0.00 39.95 2.69
2408 2508 5.511373 CCAAGAAGAATCCCAAAAGGGTTTC 60.511 44.000 13.88 13.88 39.95 2.78
2409 2509 4.347876 CCAAGAAGAATCCCAAAAGGGTTT 59.652 41.667 0.00 0.00 39.95 3.27
2410 2510 3.903714 CCAAGAAGAATCCCAAAAGGGTT 59.096 43.478 0.00 0.00 43.91 4.11
2411 2511 3.116746 ACCAAGAAGAATCCCAAAAGGGT 60.117 43.478 0.00 0.00 35.67 4.34
2412 2512 3.510459 ACCAAGAAGAATCCCAAAAGGG 58.490 45.455 0.00 0.00 35.67 3.95
2413 2513 4.262592 CCAACCAAGAAGAATCCCAAAAGG 60.263 45.833 0.00 0.00 0.00 3.11
2414 2514 4.588528 TCCAACCAAGAAGAATCCCAAAAG 59.411 41.667 0.00 0.00 0.00 2.27
2415 2515 4.551671 TCCAACCAAGAAGAATCCCAAAA 58.448 39.130 0.00 0.00 0.00 2.44
2416 2516 4.191804 TCCAACCAAGAAGAATCCCAAA 57.808 40.909 0.00 0.00 0.00 3.28
2417 2517 3.893753 TCCAACCAAGAAGAATCCCAA 57.106 42.857 0.00 0.00 0.00 4.12
2418 2518 4.088634 CAATCCAACCAAGAAGAATCCCA 58.911 43.478 0.00 0.00 0.00 4.37
2419 2519 3.448660 CCAATCCAACCAAGAAGAATCCC 59.551 47.826 0.00 0.00 0.00 3.85
2420 2520 4.344104 TCCAATCCAACCAAGAAGAATCC 58.656 43.478 0.00 0.00 0.00 3.01
2421 2521 5.982890 TTCCAATCCAACCAAGAAGAATC 57.017 39.130 0.00 0.00 0.00 2.52
2422 2522 6.940430 ATTTCCAATCCAACCAAGAAGAAT 57.060 33.333 0.00 0.00 0.00 2.40
2423 2523 7.010160 ACTATTTCCAATCCAACCAAGAAGAA 58.990 34.615 0.00 0.00 0.00 2.52
2424 2524 6.552008 ACTATTTCCAATCCAACCAAGAAGA 58.448 36.000 0.00 0.00 0.00 2.87
2425 2525 6.127619 GGACTATTTCCAATCCAACCAAGAAG 60.128 42.308 0.00 0.00 45.10 2.85
2426 2526 5.714806 GGACTATTTCCAATCCAACCAAGAA 59.285 40.000 0.00 0.00 45.10 2.52
2427 2527 5.261216 GGACTATTTCCAATCCAACCAAGA 58.739 41.667 0.00 0.00 45.10 3.02
2453 2553 1.663702 GATTACCGGGGCGATGTCG 60.664 63.158 6.32 0.00 43.27 4.35
2463 2563 3.753294 ATTGCAGTCCTAGATTACCGG 57.247 47.619 0.00 0.00 0.00 5.28
2465 2565 4.040461 TGGCTATTGCAGTCCTAGATTACC 59.960 45.833 0.66 0.00 41.91 2.85
2466 2566 5.215252 TGGCTATTGCAGTCCTAGATTAC 57.785 43.478 0.66 0.00 41.91 1.89
2504 2605 3.549423 CGCTGTTCATAAATGCCATCCTG 60.549 47.826 0.00 0.00 0.00 3.86
2505 2606 2.620115 CGCTGTTCATAAATGCCATCCT 59.380 45.455 0.00 0.00 0.00 3.24
2517 2618 1.106351 TTGCCAACCACGCTGTTCAT 61.106 50.000 0.00 0.00 0.00 2.57
2523 2624 1.960689 ACTAAAATTGCCAACCACGCT 59.039 42.857 0.00 0.00 0.00 5.07
2529 2630 7.532682 TTTCTGAAACACTAAAATTGCCAAC 57.467 32.000 0.00 0.00 0.00 3.77
2530 2631 7.984050 TCATTTCTGAAACACTAAAATTGCCAA 59.016 29.630 4.73 0.00 0.00 4.52
2573 2682 7.275697 TGCACTAAAATAAACGAAATGCATG 57.724 32.000 0.00 0.00 35.74 4.06
2575 2684 7.596621 TGAATGCACTAAAATAAACGAAATGCA 59.403 29.630 0.00 0.00 43.95 3.96
2596 2708 4.260907 CGGTGGCAGTTTCAGATATGAATG 60.261 45.833 3.15 1.52 0.00 2.67
2597 2709 3.879295 CGGTGGCAGTTTCAGATATGAAT 59.121 43.478 3.15 0.00 0.00 2.57
2600 2712 2.609459 GACGGTGGCAGTTTCAGATATG 59.391 50.000 0.00 0.00 0.00 1.78
2601 2713 2.738643 CGACGGTGGCAGTTTCAGATAT 60.739 50.000 0.00 0.00 0.00 1.63
2614 2727 0.459899 TGATCAAGATCCGACGGTGG 59.540 55.000 14.79 0.41 37.02 4.61
2622 2735 4.903054 TCATAGCCACATGATCAAGATCC 58.097 43.478 4.68 0.00 37.02 3.36
2624 2737 4.263374 CCCTCATAGCCACATGATCAAGAT 60.263 45.833 4.68 0.00 34.50 2.40
2642 2755 4.329545 GCTGTGCGAACCCCCTCA 62.330 66.667 0.00 0.00 0.00 3.86
2655 2768 0.772124 TCCCCAGGAGGAAAAGCTGT 60.772 55.000 0.00 0.00 38.24 4.40
2657 2770 0.701147 CTTCCCCAGGAGGAAAAGCT 59.299 55.000 9.89 0.00 45.25 3.74
2672 2785 4.772687 GGCGACCGTTCCCCTTCC 62.773 72.222 0.00 0.00 0.00 3.46
2678 2791 4.067913 TTACCCGGCGACCGTTCC 62.068 66.667 9.30 0.00 46.80 3.62
2679 2792 2.810887 GTTACCCGGCGACCGTTC 60.811 66.667 9.30 0.00 46.80 3.95
2690 2803 4.072839 GCTAATTAGCCCTGATGTTACCC 58.927 47.826 24.34 0.00 43.39 3.69
2711 2824 2.057137 TGAAGCCATGTAGATTGGGC 57.943 50.000 0.00 0.00 46.77 5.36
2712 2825 2.810274 CGATGAAGCCATGTAGATTGGG 59.190 50.000 0.00 0.00 34.66 4.12
2713 2826 3.249320 CACGATGAAGCCATGTAGATTGG 59.751 47.826 0.00 0.00 37.31 3.16
2714 2827 3.873361 ACACGATGAAGCCATGTAGATTG 59.127 43.478 0.00 0.00 32.09 2.67
2731 2844 4.915667 CACGATCTTTCACTTCTTACACGA 59.084 41.667 0.00 0.00 0.00 4.35
2739 2852 5.236478 TCAAAGGTTCACGATCTTTCACTTC 59.764 40.000 0.00 0.00 0.00 3.01
2749 2862 4.260620 CGTTGTCTTTCAAAGGTTCACGAT 60.261 41.667 0.00 0.00 37.81 3.73
2765 2879 4.703897 TCTTGAGAATCCAAACGTTGTCT 58.296 39.130 0.00 0.00 0.00 3.41
2786 2900 2.673368 GGTGTTGTGGTCGAGATTGATC 59.327 50.000 0.00 0.00 0.00 2.92
2798 2912 2.290641 GTGTTGCTTAGAGGTGTTGTGG 59.709 50.000 0.00 0.00 0.00 4.17
2803 2917 2.029290 CGTAGGTGTTGCTTAGAGGTGT 60.029 50.000 0.00 0.00 0.00 4.16
2804 2918 2.230508 TCGTAGGTGTTGCTTAGAGGTG 59.769 50.000 0.00 0.00 0.00 4.00
2805 2919 2.492484 CTCGTAGGTGTTGCTTAGAGGT 59.508 50.000 0.00 0.00 0.00 3.85
2828 2942 0.249868 GCAACCAAAGGGAGGCAAAC 60.250 55.000 0.00 0.00 36.95 2.93
2833 2947 0.113190 AAGGAGCAACCAAAGGGAGG 59.887 55.000 2.96 0.00 42.04 4.30
2865 2979 5.429762 TGTCATCCTCAACATCCTCCTAAAT 59.570 40.000 0.00 0.00 0.00 1.40
2869 2983 2.837947 TGTCATCCTCAACATCCTCCT 58.162 47.619 0.00 0.00 0.00 3.69
2892 3006 3.393800 CCACTCACCTTGTTCTACACAG 58.606 50.000 0.00 0.00 36.48 3.66
2897 3011 1.729586 AGCCCACTCACCTTGTTCTA 58.270 50.000 0.00 0.00 0.00 2.10
2898 3012 0.846693 AAGCCCACTCACCTTGTTCT 59.153 50.000 0.00 0.00 0.00 3.01
2899 3013 1.692411 AAAGCCCACTCACCTTGTTC 58.308 50.000 0.00 0.00 0.00 3.18
2907 3022 1.351017 CCAAGGAGTAAAGCCCACTCA 59.649 52.381 10.93 0.00 43.50 3.41
2911 3026 0.777446 AAGCCAAGGAGTAAAGCCCA 59.223 50.000 0.00 0.00 0.00 5.36
2934 3049 5.570320 ACCCTATGAATTGTGCTTTGTAGT 58.430 37.500 0.00 0.00 0.00 2.73
2935 3050 5.066505 GGACCCTATGAATTGTGCTTTGTAG 59.933 44.000 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.