Multiple sequence alignment - TraesCS6D01G356900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G356900 chr6D 100.000 2763 0 0 1 2763 450842440 450845202 0.000000e+00 5103.0
1 TraesCS6D01G356900 chr6D 95.870 1138 32 7 618 1747 100536361 100535231 0.000000e+00 1827.0
2 TraesCS6D01G356900 chr6D 100.000 236 0 0 3036 3271 450845475 450845710 1.390000e-118 436.0
3 TraesCS6D01G356900 chr6D 91.080 213 17 2 3036 3247 450844976 450845187 1.490000e-73 287.0
4 TraesCS6D01G356900 chr6D 79.903 413 36 25 1 400 455899591 455899213 3.240000e-65 259.0
5 TraesCS6D01G356900 chr6D 91.071 168 6 2 1 159 455935510 455935343 5.500000e-53 219.0
6 TraesCS6D01G356900 chr6D 77.778 414 46 28 1 395 455969880 455969494 2.560000e-51 213.0
7 TraesCS6D01G356900 chr2D 94.465 2168 81 29 617 2760 461088016 461090168 0.000000e+00 3302.0
8 TraesCS6D01G356900 chr2D 94.466 1771 63 16 618 2383 76977072 76978812 0.000000e+00 2695.0
9 TraesCS6D01G356900 chr2D 88.558 437 35 5 2303 2726 461089740 461090174 1.740000e-142 516.0
10 TraesCS6D01G356900 chrUn 93.860 2166 85 27 618 2760 30041273 30039133 0.000000e+00 3219.0
11 TraesCS6D01G356900 chrUn 91.205 1876 127 18 617 2483 84449175 84447329 0.000000e+00 2516.0
12 TraesCS6D01G356900 chrUn 89.207 454 32 7 2303 2742 30039562 30039112 4.770000e-153 551.0
13 TraesCS6D01G356900 chrUn 89.302 215 21 2 3036 3250 84447179 84446967 5.380000e-68 268.0
14 TraesCS6D01G356900 chr5A 89.292 2176 163 47 622 2758 579246712 579248856 0.000000e+00 2663.0
15 TraesCS6D01G356900 chr5A 85.526 456 52 8 2319 2763 579248448 579248900 6.390000e-127 464.0
16 TraesCS6D01G356900 chr1D 93.683 1314 49 23 1461 2753 80294758 80293458 0.000000e+00 1936.0
17 TraesCS6D01G356900 chr1D 89.125 423 32 4 2303 2713 80293879 80293459 6.260000e-142 514.0
18 TraesCS6D01G356900 chr1D 94.118 187 11 0 3083 3269 80293194 80293008 5.340000e-73 285.0
19 TraesCS6D01G356900 chr7A 90.867 1303 81 28 1479 2760 77498338 77499623 0.000000e+00 1712.0
20 TraesCS6D01G356900 chr7A 90.323 1302 93 27 1479 2760 559187486 559188774 0.000000e+00 1676.0
21 TraesCS6D01G356900 chr7A 87.872 470 42 9 2303 2760 559188346 559188812 3.710000e-149 538.0
22 TraesCS6D01G356900 chr7A 86.681 473 39 13 2303 2760 77499199 77499662 1.350000e-138 503.0
23 TraesCS6D01G356900 chr7A 91.667 216 16 2 3036 3251 559188708 559188921 6.860000e-77 298.0
24 TraesCS6D01G356900 chr7A 91.509 212 16 2 3036 3247 559188669 559188878 1.150000e-74 291.0
25 TraesCS6D01G356900 chr7A 90.094 212 21 0 3036 3247 77499439 77499650 3.210000e-70 276.0
26 TraesCS6D01G356900 chr7A 90.094 212 18 3 3036 3247 559188631 559188839 4.160000e-69 272.0
27 TraesCS6D01G356900 chr2A 90.666 1307 80 32 1479 2760 757909986 757911275 0.000000e+00 1700.0
28 TraesCS6D01G356900 chr2A 93.249 1022 58 9 618 1630 45103139 45104158 0.000000e+00 1495.0
29 TraesCS6D01G356900 chr2A 93.249 1022 52 10 618 1630 757909085 757910098 0.000000e+00 1489.0
30 TraesCS6D01G356900 chr2A 87.298 433 42 7 2303 2723 757910846 757911277 1.760000e-132 483.0
31 TraesCS6D01G356900 chr2A 92.222 90 7 0 3036 3125 757911802 757911891 9.530000e-26 128.0
32 TraesCS6D01G356900 chr2A 90.141 71 6 1 2690 2760 45105150 45105219 1.250000e-14 91.6
33 TraesCS6D01G356900 chr2A 87.324 71 8 1 2690 2760 757911089 757911158 2.710000e-11 80.5
34 TraesCS6D01G356900 chr3A 90.222 1309 89 29 1479 2763 412385958 412384665 0.000000e+00 1672.0
35 TraesCS6D01G356900 chr3A 93.487 998 58 5 618 1612 412386862 412385869 0.000000e+00 1476.0
36 TraesCS6D01G356900 chr3A 87.957 465 43 7 2303 2755 412385097 412384634 1.340000e-148 536.0
37 TraesCS6D01G356900 chr7D 91.610 1168 62 17 618 1768 610751133 610752281 0.000000e+00 1581.0
38 TraesCS6D01G356900 chr7D 90.591 999 72 6 1782 2760 610752369 610753365 0.000000e+00 1304.0
39 TraesCS6D01G356900 chr7D 90.047 211 19 2 3037 3247 610753299 610753507 4.160000e-69 272.0
40 TraesCS6D01G356900 chr5B 91.480 1115 71 13 607 1711 291497686 291496586 0.000000e+00 1511.0
41 TraesCS6D01G356900 chr7B 90.117 1113 69 18 618 1711 625251910 625253000 0.000000e+00 1408.0
42 TraesCS6D01G356900 chr7B 91.139 1027 61 21 1672 2680 625253036 625254050 0.000000e+00 1365.0
43 TraesCS6D01G356900 chr6B 91.176 1020 68 14 1672 2680 645540131 645541139 0.000000e+00 1365.0
44 TraesCS6D01G356900 chr6B 78.537 410 37 28 1 395 693324225 693323852 4.250000e-54 222.0
45 TraesCS6D01G356900 chr6B 76.905 420 53 30 1 400 693132998 693132603 7.160000e-47 198.0
46 TraesCS6D01G356900 chr6B 78.488 344 42 19 2 333 693302615 693302292 2.570000e-46 196.0
47 TraesCS6D01G356900 chr6A 86.392 485 32 14 79 550 596484827 596485290 1.750000e-137 499.0
48 TraesCS6D01G356900 chr6A 78.934 394 43 23 1 382 602717509 602717144 7.060000e-57 231.0
49 TraesCS6D01G356900 chr6A 78.535 396 41 27 1 382 602740441 602740076 1.530000e-53 220.0
50 TraesCS6D01G356900 chr6A 78.272 382 35 24 1 367 602726900 602726552 5.530000e-48 202.0
51 TraesCS6D01G356900 chr4A 90.821 207 15 3 3044 3250 671024762 671024560 1.160000e-69 274.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G356900 chr6D 450842440 450845710 3270 False 1942.000000 5103 97.026667 1 3271 3 chr6D.!!$F1 3270
1 TraesCS6D01G356900 chr6D 100535231 100536361 1130 True 1827.000000 1827 95.870000 618 1747 1 chr6D.!!$R1 1129
2 TraesCS6D01G356900 chr2D 76977072 76978812 1740 False 2695.000000 2695 94.466000 618 2383 1 chr2D.!!$F1 1765
3 TraesCS6D01G356900 chr2D 461088016 461090174 2158 False 1909.000000 3302 91.511500 617 2760 2 chr2D.!!$F2 2143
4 TraesCS6D01G356900 chrUn 30039112 30041273 2161 True 1885.000000 3219 91.533500 618 2760 2 chrUn.!!$R1 2142
5 TraesCS6D01G356900 chrUn 84446967 84449175 2208 True 1392.000000 2516 90.253500 617 3250 2 chrUn.!!$R2 2633
6 TraesCS6D01G356900 chr5A 579246712 579248900 2188 False 1563.500000 2663 87.409000 622 2763 2 chr5A.!!$F1 2141
7 TraesCS6D01G356900 chr1D 80293008 80294758 1750 True 911.666667 1936 92.308667 1461 3269 3 chr1D.!!$R1 1808
8 TraesCS6D01G356900 chr7A 77498338 77499662 1324 False 830.333333 1712 89.214000 1479 3247 3 chr7A.!!$F1 1768
9 TraesCS6D01G356900 chr7A 559187486 559188921 1435 False 615.000000 1676 90.293000 1479 3251 5 chr7A.!!$F2 1772
10 TraesCS6D01G356900 chr2A 45103139 45105219 2080 False 793.300000 1495 91.695000 618 2760 2 chr2A.!!$F1 2142
11 TraesCS6D01G356900 chr2A 757909085 757911891 2806 False 776.100000 1700 90.151800 618 3125 5 chr2A.!!$F2 2507
12 TraesCS6D01G356900 chr3A 412384634 412386862 2228 True 1228.000000 1672 90.555333 618 2763 3 chr3A.!!$R1 2145
13 TraesCS6D01G356900 chr7D 610751133 610753507 2374 False 1052.333333 1581 90.749333 618 3247 3 chr7D.!!$F1 2629
14 TraesCS6D01G356900 chr5B 291496586 291497686 1100 True 1511.000000 1511 91.480000 607 1711 1 chr5B.!!$R1 1104
15 TraesCS6D01G356900 chr7B 625251910 625254050 2140 False 1386.500000 1408 90.628000 618 2680 2 chr7B.!!$F1 2062
16 TraesCS6D01G356900 chr6B 645540131 645541139 1008 False 1365.000000 1365 91.176000 1672 2680 1 chr6B.!!$F1 1008

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 371 0.036448 TCCCACTCGACGACTCTTCT 59.964 55.0 0.0 0.00 0.0 2.85 F
388 389 0.175989 CTAGGTTGGTTCGCTCCTCC 59.824 60.0 0.0 1.52 0.0 4.30 F
392 393 0.250513 GTTGGTTCGCTCCTCCATCT 59.749 55.0 0.0 0.00 0.0 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1621 1762 0.322322 CCAAACCCATGCACATGCTT 59.678 50.000 5.31 0.0 42.66 3.91 R
1870 2160 3.998913 TGGACAGTGCATTCTCCATTA 57.001 42.857 1.93 0.0 0.00 1.90 R
2596 3241 2.029964 GGTGCCCAGACGTCGAAA 59.970 61.111 10.46 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.778415 CGACGACGTCTGGGCCAG 62.778 72.222 28.01 28.01 34.56 4.85
20 21 4.379243 CGACGTCTGGGCCAGCTT 62.379 66.667 29.02 16.72 0.00 3.74
21 22 2.435059 GACGTCTGGGCCAGCTTC 60.435 66.667 29.02 20.69 0.00 3.86
22 23 3.959991 GACGTCTGGGCCAGCTTCC 62.960 68.421 29.02 14.40 0.00 3.46
23 24 3.710722 CGTCTGGGCCAGCTTCCT 61.711 66.667 29.02 0.00 0.00 3.36
24 25 2.045536 GTCTGGGCCAGCTTCCTG 60.046 66.667 29.02 4.29 38.85 3.86
25 26 4.039092 TCTGGGCCAGCTTCCTGC 62.039 66.667 29.02 0.00 43.29 4.85
83 84 3.702048 CCCGCCCTCGTCCAAGAA 61.702 66.667 0.00 0.00 0.00 2.52
84 85 2.125512 CCGCCCTCGTCCAAGAAG 60.126 66.667 0.00 0.00 0.00 2.85
85 86 2.125512 CGCCCTCGTCCAAGAAGG 60.126 66.667 0.00 0.00 39.47 3.46
86 87 2.646175 CGCCCTCGTCCAAGAAGGA 61.646 63.158 0.00 0.00 46.75 3.36
101 102 2.762043 GGAGCTCTTCCTCCGCCT 60.762 66.667 14.64 0.00 41.79 5.52
102 103 2.791868 GGAGCTCTTCCTCCGCCTC 61.792 68.421 14.64 0.00 41.79 4.70
103 104 1.756561 GAGCTCTTCCTCCGCCTCT 60.757 63.158 6.43 0.00 0.00 3.69
104 105 1.734388 GAGCTCTTCCTCCGCCTCTC 61.734 65.000 6.43 0.00 0.00 3.20
105 106 2.791868 GCTCTTCCTCCGCCTCTCC 61.792 68.421 0.00 0.00 0.00 3.71
106 107 2.440430 TCTTCCTCCGCCTCTCCG 60.440 66.667 0.00 0.00 0.00 4.63
107 108 4.214327 CTTCCTCCGCCTCTCCGC 62.214 72.222 0.00 0.00 0.00 5.54
135 136 3.627690 CTCCTCCAGGACAGGCTC 58.372 66.667 0.00 0.00 39.78 4.70
136 137 2.363018 TCCTCCAGGACAGGCTCG 60.363 66.667 0.00 0.00 39.78 5.03
137 138 2.681778 CCTCCAGGACAGGCTCGT 60.682 66.667 0.00 0.00 37.39 4.18
138 139 2.575993 CTCCAGGACAGGCTCGTG 59.424 66.667 0.00 0.00 34.96 4.35
140 141 3.314331 CCAGGACAGGCTCGTGGT 61.314 66.667 7.18 0.00 46.16 4.16
141 142 1.982395 CCAGGACAGGCTCGTGGTA 60.982 63.158 7.18 0.00 46.16 3.25
142 143 1.215647 CAGGACAGGCTCGTGGTAC 59.784 63.158 0.00 0.00 32.05 3.34
143 144 2.181021 GGACAGGCTCGTGGTACG 59.819 66.667 0.00 0.00 44.19 3.67
144 145 2.633509 GGACAGGCTCGTGGTACGT 61.634 63.158 0.00 0.00 43.14 3.57
145 146 1.308069 GGACAGGCTCGTGGTACGTA 61.308 60.000 0.00 0.00 43.14 3.57
146 147 0.179179 GACAGGCTCGTGGTACGTAC 60.179 60.000 17.56 17.56 43.14 3.67
147 148 0.607489 ACAGGCTCGTGGTACGTACT 60.607 55.000 24.07 0.00 43.14 2.73
148 149 1.339055 ACAGGCTCGTGGTACGTACTA 60.339 52.381 24.07 16.71 43.14 1.82
149 150 1.063174 CAGGCTCGTGGTACGTACTAC 59.937 57.143 26.93 26.93 43.14 2.73
150 151 0.378610 GGCTCGTGGTACGTACTACC 59.621 60.000 29.37 18.59 45.08 3.18
151 152 1.373570 GCTCGTGGTACGTACTACCT 58.626 55.000 29.37 0.00 45.10 3.08
152 153 1.063174 GCTCGTGGTACGTACTACCTG 59.937 57.143 29.37 23.31 45.10 4.00
153 154 2.350522 CTCGTGGTACGTACTACCTGT 58.649 52.381 29.37 0.61 45.10 4.00
154 155 3.521560 CTCGTGGTACGTACTACCTGTA 58.478 50.000 29.37 15.46 45.10 2.74
155 156 3.259064 TCGTGGTACGTACTACCTGTAC 58.741 50.000 29.37 11.08 45.10 2.90
162 163 2.840296 GTACTACCTGTACGCTCACC 57.160 55.000 0.00 0.00 41.58 4.02
163 164 1.403323 GTACTACCTGTACGCTCACCC 59.597 57.143 0.00 0.00 41.58 4.61
164 165 0.039326 ACTACCTGTACGCTCACCCT 59.961 55.000 0.00 0.00 0.00 4.34
165 166 0.456221 CTACCTGTACGCTCACCCTG 59.544 60.000 0.00 0.00 0.00 4.45
166 167 1.601419 TACCTGTACGCTCACCCTGC 61.601 60.000 0.00 0.00 0.00 4.85
167 168 2.125512 CTGTACGCTCACCCTGCC 60.126 66.667 0.00 0.00 0.00 4.85
168 169 2.603473 TGTACGCTCACCCTGCCT 60.603 61.111 0.00 0.00 0.00 4.75
169 170 1.304630 TGTACGCTCACCCTGCCTA 60.305 57.895 0.00 0.00 0.00 3.93
170 171 1.320344 TGTACGCTCACCCTGCCTAG 61.320 60.000 0.00 0.00 0.00 3.02
171 172 2.423898 TACGCTCACCCTGCCTAGC 61.424 63.158 0.00 0.00 0.00 3.42
172 173 2.856039 TACGCTCACCCTGCCTAGCT 62.856 60.000 0.00 0.00 32.73 3.32
173 174 2.127869 CGCTCACCCTGCCTAGCTA 61.128 63.158 0.00 0.00 32.73 3.32
174 175 1.745264 GCTCACCCTGCCTAGCTAG 59.255 63.158 14.20 14.20 32.18 3.42
175 176 1.745264 CTCACCCTGCCTAGCTAGC 59.255 63.158 15.74 6.62 0.00 3.42
176 177 0.758685 CTCACCCTGCCTAGCTAGCT 60.759 60.000 23.12 23.12 0.00 3.32
177 178 0.757188 TCACCCTGCCTAGCTAGCTC 60.757 60.000 23.26 7.84 0.00 4.09
178 179 1.458588 ACCCTGCCTAGCTAGCTCC 60.459 63.158 23.26 11.60 0.00 4.70
179 180 1.152355 CCCTGCCTAGCTAGCTCCT 60.152 63.158 23.26 0.00 0.00 3.69
180 181 1.184970 CCCTGCCTAGCTAGCTCCTC 61.185 65.000 23.26 11.56 0.00 3.71
181 182 1.523154 CCTGCCTAGCTAGCTCCTCG 61.523 65.000 23.26 8.18 0.00 4.63
182 183 1.523154 CTGCCTAGCTAGCTCCTCGG 61.523 65.000 23.26 17.76 0.00 4.63
183 184 2.926420 GCCTAGCTAGCTCCTCGGC 61.926 68.421 23.26 23.10 0.00 5.54
184 185 2.272447 CCTAGCTAGCTCCTCGGCC 61.272 68.421 23.26 0.00 0.00 6.13
185 186 2.594882 TAGCTAGCTCCTCGGCCG 60.595 66.667 23.26 22.12 0.00 6.13
198 199 4.593864 GGCCGGCCGATGAGTCTC 62.594 72.222 33.60 2.25 0.00 3.36
199 200 3.532155 GCCGGCCGATGAGTCTCT 61.532 66.667 30.73 0.00 0.00 3.10
200 201 2.194212 GCCGGCCGATGAGTCTCTA 61.194 63.158 30.73 0.00 0.00 2.43
201 202 1.735376 GCCGGCCGATGAGTCTCTAA 61.735 60.000 30.73 0.00 0.00 2.10
202 203 0.962489 CCGGCCGATGAGTCTCTAAT 59.038 55.000 30.73 0.00 0.00 1.73
203 204 1.068194 CCGGCCGATGAGTCTCTAATC 60.068 57.143 30.73 0.00 0.00 1.75
204 205 1.609072 CGGCCGATGAGTCTCTAATCA 59.391 52.381 24.07 0.00 0.00 2.57
205 206 2.034685 CGGCCGATGAGTCTCTAATCAA 59.965 50.000 24.07 0.00 0.00 2.57
206 207 3.648009 GGCCGATGAGTCTCTAATCAAG 58.352 50.000 0.65 0.00 0.00 3.02
207 208 3.068873 GGCCGATGAGTCTCTAATCAAGT 59.931 47.826 0.65 0.00 0.00 3.16
208 209 4.047822 GCCGATGAGTCTCTAATCAAGTG 58.952 47.826 0.65 0.00 0.00 3.16
209 210 4.615949 CCGATGAGTCTCTAATCAAGTGG 58.384 47.826 0.65 0.00 0.00 4.00
210 211 4.047822 CGATGAGTCTCTAATCAAGTGGC 58.952 47.826 0.65 0.00 0.00 5.01
211 212 4.202101 CGATGAGTCTCTAATCAAGTGGCT 60.202 45.833 0.65 0.00 36.38 4.75
212 213 5.669477 GATGAGTCTCTAATCAAGTGGCTT 58.331 41.667 0.65 0.00 33.88 4.35
213 214 5.489792 TGAGTCTCTAATCAAGTGGCTTT 57.510 39.130 0.65 0.00 33.88 3.51
214 215 5.240891 TGAGTCTCTAATCAAGTGGCTTTG 58.759 41.667 0.65 0.00 33.88 2.77
215 216 5.012046 TGAGTCTCTAATCAAGTGGCTTTGA 59.988 40.000 0.65 7.31 41.00 2.69
216 217 6.059787 AGTCTCTAATCAAGTGGCTTTGAT 57.940 37.500 10.63 10.63 46.81 2.57
217 218 5.879223 AGTCTCTAATCAAGTGGCTTTGATG 59.121 40.000 15.24 7.18 44.74 3.07
218 219 5.065731 GTCTCTAATCAAGTGGCTTTGATGG 59.934 44.000 15.24 12.12 44.74 3.51
219 220 4.922206 TCTAATCAAGTGGCTTTGATGGT 58.078 39.130 15.24 6.64 44.74 3.55
220 221 3.947910 AATCAAGTGGCTTTGATGGTG 57.052 42.857 15.24 0.00 44.74 4.17
221 222 1.619654 TCAAGTGGCTTTGATGGTGG 58.380 50.000 1.70 0.00 32.39 4.61
222 223 1.133513 TCAAGTGGCTTTGATGGTGGT 60.134 47.619 1.70 0.00 32.39 4.16
223 224 1.000060 CAAGTGGCTTTGATGGTGGTG 60.000 52.381 0.00 0.00 0.00 4.17
224 225 0.185901 AGTGGCTTTGATGGTGGTGT 59.814 50.000 0.00 0.00 0.00 4.16
225 226 0.314935 GTGGCTTTGATGGTGGTGTG 59.685 55.000 0.00 0.00 0.00 3.82
226 227 1.290009 GGCTTTGATGGTGGTGTGC 59.710 57.895 0.00 0.00 0.00 4.57
227 228 1.081242 GCTTTGATGGTGGTGTGCG 60.081 57.895 0.00 0.00 0.00 5.34
228 229 1.795170 GCTTTGATGGTGGTGTGCGT 61.795 55.000 0.00 0.00 0.00 5.24
229 230 0.040157 CTTTGATGGTGGTGTGCGTG 60.040 55.000 0.00 0.00 0.00 5.34
230 231 2.069465 TTTGATGGTGGTGTGCGTGC 62.069 55.000 0.00 0.00 0.00 5.34
231 232 4.088762 GATGGTGGTGTGCGTGCG 62.089 66.667 0.00 0.00 0.00 5.34
248 249 3.853330 GCGCGCGCAATCTGAAGA 61.853 61.111 46.11 0.00 41.49 2.87
249 250 2.319032 CGCGCGCAATCTGAAGAG 59.681 61.111 32.61 6.38 0.00 2.85
250 251 2.022484 GCGCGCAATCTGAAGAGC 59.978 61.111 29.10 0.00 0.00 4.09
251 252 2.743752 GCGCGCAATCTGAAGAGCA 61.744 57.895 29.10 0.00 0.00 4.26
252 253 2.012237 CGCGCAATCTGAAGAGCAT 58.988 52.632 8.75 0.00 0.00 3.79
253 254 0.315951 CGCGCAATCTGAAGAGCATG 60.316 55.000 8.75 0.00 0.00 4.06
254 255 0.731417 GCGCAATCTGAAGAGCATGT 59.269 50.000 0.30 0.00 0.00 3.21
255 256 1.531264 GCGCAATCTGAAGAGCATGTG 60.531 52.381 0.30 0.00 0.00 3.21
256 257 1.063616 CGCAATCTGAAGAGCATGTGG 59.936 52.381 0.00 0.00 0.00 4.17
257 258 1.404391 GCAATCTGAAGAGCATGTGGG 59.596 52.381 0.00 0.00 0.00 4.61
258 259 2.719739 CAATCTGAAGAGCATGTGGGT 58.280 47.619 0.00 0.00 0.00 4.51
259 260 2.414994 ATCTGAAGAGCATGTGGGTG 57.585 50.000 0.00 0.00 0.00 4.61
260 261 0.325933 TCTGAAGAGCATGTGGGTGG 59.674 55.000 0.00 0.00 0.00 4.61
261 262 0.325933 CTGAAGAGCATGTGGGTGGA 59.674 55.000 0.00 0.00 0.00 4.02
262 263 0.036732 TGAAGAGCATGTGGGTGGAC 59.963 55.000 0.00 0.00 0.00 4.02
263 264 0.036732 GAAGAGCATGTGGGTGGACA 59.963 55.000 0.00 0.00 0.00 4.02
264 265 0.037303 AAGAGCATGTGGGTGGACAG 59.963 55.000 0.00 0.00 0.00 3.51
265 266 1.377725 GAGCATGTGGGTGGACAGG 60.378 63.158 0.00 0.00 0.00 4.00
266 267 2.361610 GCATGTGGGTGGACAGGG 60.362 66.667 0.00 0.00 0.00 4.45
267 268 2.905996 GCATGTGGGTGGACAGGGA 61.906 63.158 0.00 0.00 0.00 4.20
268 269 1.300963 CATGTGGGTGGACAGGGAG 59.699 63.158 0.00 0.00 0.00 4.30
269 270 1.925455 ATGTGGGTGGACAGGGAGG 60.925 63.158 0.00 0.00 0.00 4.30
270 271 4.035102 GTGGGTGGACAGGGAGGC 62.035 72.222 0.00 0.00 0.00 4.70
293 294 1.527034 CACCAAGTGCTACATGCTGT 58.473 50.000 0.00 0.00 43.37 4.40
294 295 1.466167 CACCAAGTGCTACATGCTGTC 59.534 52.381 0.00 0.00 43.37 3.51
295 296 1.089920 CCAAGTGCTACATGCTGTCC 58.910 55.000 0.00 0.00 43.37 4.02
296 297 0.723414 CAAGTGCTACATGCTGTCCG 59.277 55.000 0.00 0.00 43.37 4.79
297 298 1.021390 AAGTGCTACATGCTGTCCGC 61.021 55.000 0.00 0.00 43.37 5.54
298 299 2.125147 TGCTACATGCTGTCCGCC 60.125 61.111 0.00 0.00 43.37 6.13
299 300 2.187946 GCTACATGCTGTCCGCCT 59.812 61.111 0.00 0.00 38.95 5.52
300 301 2.176273 GCTACATGCTGTCCGCCTG 61.176 63.158 0.00 0.00 39.76 4.85
301 302 1.522355 CTACATGCTGTCCGCCTGG 60.522 63.158 0.00 0.00 38.41 4.45
302 303 1.960040 CTACATGCTGTCCGCCTGGA 61.960 60.000 0.00 0.00 43.88 3.86
316 317 3.787394 TGGAACCTCCAGTCCGTC 58.213 61.111 0.00 0.00 42.67 4.79
317 318 1.911766 TGGAACCTCCAGTCCGTCC 60.912 63.158 0.00 0.00 42.67 4.79
318 319 1.609794 GGAACCTCCAGTCCGTCCT 60.610 63.158 0.00 0.00 36.28 3.85
319 320 1.592223 GAACCTCCAGTCCGTCCTG 59.408 63.158 0.00 0.00 0.00 3.86
320 321 1.152312 AACCTCCAGTCCGTCCTGT 60.152 57.895 0.00 0.00 0.00 4.00
321 322 1.186267 AACCTCCAGTCCGTCCTGTC 61.186 60.000 0.00 0.00 0.00 3.51
322 323 2.701780 CCTCCAGTCCGTCCTGTCG 61.702 68.421 0.00 0.00 0.00 4.35
342 343 2.202974 GGACACGCCCGATTACCC 60.203 66.667 0.00 0.00 0.00 3.69
343 344 2.584143 GACACGCCCGATTACCCG 60.584 66.667 0.00 0.00 0.00 5.28
344 345 3.067480 GACACGCCCGATTACCCGA 62.067 63.158 0.00 0.00 0.00 5.14
345 346 2.279252 CACGCCCGATTACCCGAG 60.279 66.667 0.00 0.00 0.00 4.63
346 347 2.440796 ACGCCCGATTACCCGAGA 60.441 61.111 0.00 0.00 0.00 4.04
347 348 2.027169 CGCCCGATTACCCGAGAC 59.973 66.667 0.00 0.00 0.00 3.36
348 349 2.027169 GCCCGATTACCCGAGACG 59.973 66.667 0.00 0.00 0.00 4.18
358 359 3.450115 CCGAGACGGGTCCCACTC 61.450 72.222 17.48 17.48 44.15 3.51
360 361 2.360852 GAGACGGGTCCCACTCGA 60.361 66.667 9.12 0.00 46.98 4.04
361 362 2.675772 AGACGGGTCCCACTCGAC 60.676 66.667 9.12 0.00 46.98 4.20
362 363 4.112341 GACGGGTCCCACTCGACG 62.112 72.222 9.12 0.00 46.98 5.12
363 364 4.648626 ACGGGTCCCACTCGACGA 62.649 66.667 9.12 0.00 46.98 4.20
364 365 4.112341 CGGGTCCCACTCGACGAC 62.112 72.222 9.12 0.00 46.98 4.34
365 366 2.675772 GGGTCCCACTCGACGACT 60.676 66.667 1.78 0.00 33.30 4.18
366 367 2.698763 GGGTCCCACTCGACGACTC 61.699 68.421 1.78 0.00 33.30 3.36
367 368 1.674980 GGTCCCACTCGACGACTCT 60.675 63.158 0.00 0.00 33.30 3.24
368 369 1.242665 GGTCCCACTCGACGACTCTT 61.243 60.000 0.00 0.00 33.30 2.85
369 370 0.168568 GTCCCACTCGACGACTCTTC 59.831 60.000 0.00 0.00 0.00 2.87
370 371 0.036448 TCCCACTCGACGACTCTTCT 59.964 55.000 0.00 0.00 0.00 2.85
371 372 1.277273 TCCCACTCGACGACTCTTCTA 59.723 52.381 0.00 0.00 0.00 2.10
372 373 1.666700 CCCACTCGACGACTCTTCTAG 59.333 57.143 0.00 0.00 0.00 2.43
373 374 1.666700 CCACTCGACGACTCTTCTAGG 59.333 57.143 0.00 0.00 0.00 3.02
374 375 2.348660 CACTCGACGACTCTTCTAGGT 58.651 52.381 0.00 0.00 0.00 3.08
375 376 2.743126 CACTCGACGACTCTTCTAGGTT 59.257 50.000 0.00 0.00 0.00 3.50
376 377 2.743126 ACTCGACGACTCTTCTAGGTTG 59.257 50.000 0.00 0.00 0.00 3.77
377 378 2.082231 TCGACGACTCTTCTAGGTTGG 58.918 52.381 0.00 0.00 0.00 3.77
378 379 1.811359 CGACGACTCTTCTAGGTTGGT 59.189 52.381 0.00 0.00 0.00 3.67
379 380 2.228343 CGACGACTCTTCTAGGTTGGTT 59.772 50.000 0.00 0.00 0.00 3.67
380 381 3.670091 CGACGACTCTTCTAGGTTGGTTC 60.670 52.174 0.00 0.00 0.00 3.62
381 382 2.228343 ACGACTCTTCTAGGTTGGTTCG 59.772 50.000 0.00 0.00 0.00 3.95
382 383 2.608268 GACTCTTCTAGGTTGGTTCGC 58.392 52.381 0.00 0.00 0.00 4.70
383 384 2.231721 GACTCTTCTAGGTTGGTTCGCT 59.768 50.000 0.00 0.00 0.00 4.93
384 385 2.231721 ACTCTTCTAGGTTGGTTCGCTC 59.768 50.000 0.00 0.00 0.00 5.03
385 386 1.549170 TCTTCTAGGTTGGTTCGCTCC 59.451 52.381 0.00 0.00 0.00 4.70
386 387 1.550976 CTTCTAGGTTGGTTCGCTCCT 59.449 52.381 0.00 0.00 0.00 3.69
387 388 1.183549 TCTAGGTTGGTTCGCTCCTC 58.816 55.000 0.00 0.00 0.00 3.71
388 389 0.175989 CTAGGTTGGTTCGCTCCTCC 59.824 60.000 0.00 1.52 0.00 4.30
389 390 0.543410 TAGGTTGGTTCGCTCCTCCA 60.543 55.000 0.00 0.00 0.00 3.86
390 391 1.201429 AGGTTGGTTCGCTCCTCCAT 61.201 55.000 0.00 0.00 0.00 3.41
391 392 0.744771 GGTTGGTTCGCTCCTCCATC 60.745 60.000 0.00 0.00 0.00 3.51
392 393 0.250513 GTTGGTTCGCTCCTCCATCT 59.749 55.000 0.00 0.00 0.00 2.90
393 394 0.537188 TTGGTTCGCTCCTCCATCTC 59.463 55.000 0.00 0.00 0.00 2.75
394 395 1.330655 TGGTTCGCTCCTCCATCTCC 61.331 60.000 0.00 0.00 0.00 3.71
395 396 1.330655 GGTTCGCTCCTCCATCTCCA 61.331 60.000 0.00 0.00 0.00 3.86
396 397 0.755686 GTTCGCTCCTCCATCTCCAT 59.244 55.000 0.00 0.00 0.00 3.41
397 398 0.755079 TTCGCTCCTCCATCTCCATG 59.245 55.000 0.00 0.00 0.00 3.66
398 399 1.301558 CGCTCCTCCATCTCCATGC 60.302 63.158 0.00 0.00 0.00 4.06
399 400 1.834996 GCTCCTCCATCTCCATGCA 59.165 57.895 0.00 0.00 0.00 3.96
400 401 0.534652 GCTCCTCCATCTCCATGCAC 60.535 60.000 0.00 0.00 0.00 4.57
401 402 0.835276 CTCCTCCATCTCCATGCACA 59.165 55.000 0.00 0.00 0.00 4.57
402 403 1.211212 CTCCTCCATCTCCATGCACAA 59.789 52.381 0.00 0.00 0.00 3.33
403 404 1.848388 TCCTCCATCTCCATGCACAAT 59.152 47.619 0.00 0.00 0.00 2.71
404 405 3.047857 TCCTCCATCTCCATGCACAATA 58.952 45.455 0.00 0.00 0.00 1.90
405 406 3.144506 CCTCCATCTCCATGCACAATAC 58.855 50.000 0.00 0.00 0.00 1.89
406 407 3.181447 CCTCCATCTCCATGCACAATACT 60.181 47.826 0.00 0.00 0.00 2.12
407 408 3.812262 TCCATCTCCATGCACAATACTG 58.188 45.455 0.00 0.00 0.00 2.74
408 409 2.292569 CCATCTCCATGCACAATACTGC 59.707 50.000 0.00 0.00 37.70 4.40
409 410 3.211865 CATCTCCATGCACAATACTGCT 58.788 45.455 0.00 0.00 38.07 4.24
410 411 4.383173 CATCTCCATGCACAATACTGCTA 58.617 43.478 0.00 0.00 38.07 3.49
411 412 3.797039 TCTCCATGCACAATACTGCTAC 58.203 45.455 0.00 0.00 38.07 3.58
412 413 3.452264 TCTCCATGCACAATACTGCTACT 59.548 43.478 0.00 0.00 38.07 2.57
413 414 4.649218 TCTCCATGCACAATACTGCTACTA 59.351 41.667 0.00 0.00 38.07 1.82
414 415 4.693283 TCCATGCACAATACTGCTACTAC 58.307 43.478 0.00 0.00 38.07 2.73
415 416 4.405680 TCCATGCACAATACTGCTACTACT 59.594 41.667 0.00 0.00 38.07 2.57
416 417 5.104941 TCCATGCACAATACTGCTACTACTT 60.105 40.000 0.00 0.00 38.07 2.24
417 418 5.007039 CCATGCACAATACTGCTACTACTTG 59.993 44.000 0.00 0.00 38.07 3.16
418 419 5.400066 TGCACAATACTGCTACTACTTGA 57.600 39.130 0.00 0.00 38.07 3.02
419 420 5.789521 TGCACAATACTGCTACTACTTGAA 58.210 37.500 0.00 0.00 38.07 2.69
420 421 6.227522 TGCACAATACTGCTACTACTTGAAA 58.772 36.000 0.00 0.00 38.07 2.69
421 422 6.878923 TGCACAATACTGCTACTACTTGAAAT 59.121 34.615 0.00 0.00 38.07 2.17
422 423 7.064609 TGCACAATACTGCTACTACTTGAAATC 59.935 37.037 0.00 0.00 38.07 2.17
423 424 7.064609 GCACAATACTGCTACTACTTGAAATCA 59.935 37.037 0.00 0.00 34.06 2.57
424 425 8.383619 CACAATACTGCTACTACTTGAAATCAC 58.616 37.037 0.00 0.00 0.00 3.06
425 426 8.314751 ACAATACTGCTACTACTTGAAATCACT 58.685 33.333 0.00 0.00 0.00 3.41
426 427 9.155975 CAATACTGCTACTACTTGAAATCACTT 57.844 33.333 0.00 0.00 0.00 3.16
427 428 9.726438 AATACTGCTACTACTTGAAATCACTTT 57.274 29.630 0.00 0.00 0.00 2.66
428 429 9.726438 ATACTGCTACTACTTGAAATCACTTTT 57.274 29.630 0.00 0.00 0.00 2.27
429 430 8.451908 ACTGCTACTACTTGAAATCACTTTTT 57.548 30.769 0.00 0.00 0.00 1.94
430 431 8.345565 ACTGCTACTACTTGAAATCACTTTTTG 58.654 33.333 0.00 0.00 0.00 2.44
431 432 7.648142 TGCTACTACTTGAAATCACTTTTTGG 58.352 34.615 0.00 0.00 0.00 3.28
432 433 7.284489 TGCTACTACTTGAAATCACTTTTTGGT 59.716 33.333 0.00 0.00 0.00 3.67
433 434 8.780249 GCTACTACTTGAAATCACTTTTTGGTA 58.220 33.333 0.00 0.00 0.00 3.25
493 494 9.270640 AGAGATCAATTTCATTTCGAGATTAGG 57.729 33.333 0.00 0.00 27.76 2.69
494 495 9.265901 GAGATCAATTTCATTTCGAGATTAGGA 57.734 33.333 0.00 0.00 27.76 2.94
495 496 9.790344 AGATCAATTTCATTTCGAGATTAGGAT 57.210 29.630 0.00 0.00 27.76 3.24
496 497 9.823098 GATCAATTTCATTTCGAGATTAGGATG 57.177 33.333 0.00 0.00 27.76 3.51
497 498 8.962884 TCAATTTCATTTCGAGATTAGGATGA 57.037 30.769 0.00 0.00 27.76 2.92
498 499 9.565090 TCAATTTCATTTCGAGATTAGGATGAT 57.435 29.630 0.00 0.00 27.76 2.45
499 500 9.608617 CAATTTCATTTCGAGATTAGGATGATG 57.391 33.333 0.00 0.00 27.76 3.07
500 501 8.915057 ATTTCATTTCGAGATTAGGATGATGT 57.085 30.769 0.00 0.00 0.00 3.06
501 502 8.737168 TTTCATTTCGAGATTAGGATGATGTT 57.263 30.769 0.00 0.00 0.00 2.71
502 503 7.719778 TCATTTCGAGATTAGGATGATGTTG 57.280 36.000 0.00 0.00 0.00 3.33
503 504 5.991328 TTTCGAGATTAGGATGATGTTGC 57.009 39.130 0.00 0.00 0.00 4.17
504 505 3.642705 TCGAGATTAGGATGATGTTGCG 58.357 45.455 0.00 0.00 0.00 4.85
505 506 2.156504 CGAGATTAGGATGATGTTGCGC 59.843 50.000 0.00 0.00 0.00 6.09
506 507 3.133691 GAGATTAGGATGATGTTGCGCA 58.866 45.455 5.66 5.66 0.00 6.09
507 508 3.748083 AGATTAGGATGATGTTGCGCAT 58.252 40.909 12.75 0.00 41.24 4.73
508 509 3.501062 AGATTAGGATGATGTTGCGCATG 59.499 43.478 12.75 0.00 38.06 4.06
509 510 0.946528 TAGGATGATGTTGCGCATGC 59.053 50.000 12.75 7.91 38.06 4.06
510 511 0.750546 AGGATGATGTTGCGCATGCT 60.751 50.000 12.75 1.90 43.34 3.79
511 512 0.946528 GGATGATGTTGCGCATGCTA 59.053 50.000 12.75 1.24 43.34 3.49
512 513 1.334556 GGATGATGTTGCGCATGCTAA 59.665 47.619 12.75 8.14 43.34 3.09
513 514 2.378806 GATGATGTTGCGCATGCTAAC 58.621 47.619 12.75 19.55 43.34 2.34
514 515 1.452110 TGATGTTGCGCATGCTAACT 58.548 45.000 25.25 15.84 43.34 2.24
515 516 1.811965 TGATGTTGCGCATGCTAACTT 59.188 42.857 25.25 21.28 43.34 2.66
516 517 2.159531 TGATGTTGCGCATGCTAACTTC 60.160 45.455 26.22 26.22 43.34 3.01
517 518 1.522668 TGTTGCGCATGCTAACTTCT 58.477 45.000 25.25 0.00 43.34 2.85
518 519 1.879380 TGTTGCGCATGCTAACTTCTT 59.121 42.857 25.25 0.00 43.34 2.52
519 520 2.245096 GTTGCGCATGCTAACTTCTTG 58.755 47.619 12.75 0.00 43.34 3.02
520 521 1.522668 TGCGCATGCTAACTTCTTGT 58.477 45.000 17.13 0.00 43.34 3.16
521 522 1.879380 TGCGCATGCTAACTTCTTGTT 59.121 42.857 17.13 0.00 43.34 2.83
522 523 2.245096 GCGCATGCTAACTTCTTGTTG 58.755 47.619 17.13 0.00 39.55 3.33
523 524 2.245096 CGCATGCTAACTTCTTGTTGC 58.755 47.619 17.13 0.00 39.55 4.17
524 525 2.095567 CGCATGCTAACTTCTTGTTGCT 60.096 45.455 17.13 0.00 39.55 3.91
525 526 3.610114 CGCATGCTAACTTCTTGTTGCTT 60.610 43.478 17.13 0.00 39.55 3.91
526 527 3.916776 GCATGCTAACTTCTTGTTGCTTC 59.083 43.478 11.37 0.00 39.55 3.86
527 528 4.557296 GCATGCTAACTTCTTGTTGCTTCA 60.557 41.667 11.37 0.00 39.55 3.02
528 529 4.552166 TGCTAACTTCTTGTTGCTTCAC 57.448 40.909 0.00 0.00 39.55 3.18
529 530 3.944650 TGCTAACTTCTTGTTGCTTCACA 59.055 39.130 0.00 0.00 39.55 3.58
530 531 4.201910 TGCTAACTTCTTGTTGCTTCACAC 60.202 41.667 0.00 0.00 39.55 3.82
531 532 4.201910 GCTAACTTCTTGTTGCTTCACACA 60.202 41.667 0.00 0.00 39.55 3.72
532 533 4.989279 AACTTCTTGTTGCTTCACACAT 57.011 36.364 0.00 0.00 37.52 3.21
533 534 6.293407 GCTAACTTCTTGTTGCTTCACACATA 60.293 38.462 0.00 0.00 39.55 2.29
534 535 6.449635 AACTTCTTGTTGCTTCACACATAA 57.550 33.333 0.00 0.00 37.52 1.90
535 536 6.449635 ACTTCTTGTTGCTTCACACATAAA 57.550 33.333 0.00 0.00 0.00 1.40
536 537 6.265577 ACTTCTTGTTGCTTCACACATAAAC 58.734 36.000 0.00 0.00 0.00 2.01
537 538 4.843147 TCTTGTTGCTTCACACATAAACG 58.157 39.130 0.00 0.00 0.00 3.60
538 539 4.572795 TCTTGTTGCTTCACACATAAACGA 59.427 37.500 0.00 0.00 0.00 3.85
539 540 4.884458 TGTTGCTTCACACATAAACGAA 57.116 36.364 0.00 0.00 0.00 3.85
540 541 4.593157 TGTTGCTTCACACATAAACGAAC 58.407 39.130 0.00 0.00 0.00 3.95
541 542 4.334203 TGTTGCTTCACACATAAACGAACT 59.666 37.500 0.00 0.00 0.00 3.01
542 543 5.163703 TGTTGCTTCACACATAAACGAACTT 60.164 36.000 0.00 0.00 0.00 2.66
543 544 6.037281 TGTTGCTTCACACATAAACGAACTTA 59.963 34.615 0.00 0.00 0.00 2.24
544 545 6.223138 TGCTTCACACATAAACGAACTTAG 57.777 37.500 0.00 0.00 0.00 2.18
545 546 5.986741 TGCTTCACACATAAACGAACTTAGA 59.013 36.000 0.00 0.00 0.00 2.10
546 547 6.145534 TGCTTCACACATAAACGAACTTAGAG 59.854 38.462 0.00 0.00 0.00 2.43
547 548 6.365247 GCTTCACACATAAACGAACTTAGAGA 59.635 38.462 0.00 0.00 0.00 3.10
548 549 7.063544 GCTTCACACATAAACGAACTTAGAGAT 59.936 37.037 0.00 0.00 0.00 2.75
549 550 8.827177 TTCACACATAAACGAACTTAGAGATT 57.173 30.769 0.00 0.00 0.00 2.40
550 551 8.239681 TCACACATAAACGAACTTAGAGATTG 57.760 34.615 0.00 0.00 0.00 2.67
551 552 7.870954 TCACACATAAACGAACTTAGAGATTGT 59.129 33.333 0.00 0.00 0.00 2.71
552 553 7.952101 CACACATAAACGAACTTAGAGATTGTG 59.048 37.037 0.00 0.00 36.54 3.33
553 554 7.656137 ACACATAAACGAACTTAGAGATTGTGT 59.344 33.333 0.00 0.00 38.27 3.72
554 555 7.952101 CACATAAACGAACTTAGAGATTGTGTG 59.048 37.037 0.00 0.00 34.03 3.82
555 556 7.870954 ACATAAACGAACTTAGAGATTGTGTGA 59.129 33.333 0.00 0.00 0.00 3.58
556 557 6.526566 AAACGAACTTAGAGATTGTGTGAC 57.473 37.500 0.00 0.00 0.00 3.67
557 558 5.455056 ACGAACTTAGAGATTGTGTGACT 57.545 39.130 0.00 0.00 0.00 3.41
558 559 5.223382 ACGAACTTAGAGATTGTGTGACTG 58.777 41.667 0.00 0.00 0.00 3.51
559 560 5.221263 ACGAACTTAGAGATTGTGTGACTGT 60.221 40.000 0.00 0.00 0.00 3.55
560 561 5.692204 CGAACTTAGAGATTGTGTGACTGTT 59.308 40.000 0.00 0.00 0.00 3.16
561 562 6.201044 CGAACTTAGAGATTGTGTGACTGTTT 59.799 38.462 0.00 0.00 0.00 2.83
562 563 7.254455 CGAACTTAGAGATTGTGTGACTGTTTT 60.254 37.037 0.00 0.00 0.00 2.43
563 564 7.484035 ACTTAGAGATTGTGTGACTGTTTTC 57.516 36.000 0.00 0.00 0.00 2.29
564 565 7.275920 ACTTAGAGATTGTGTGACTGTTTTCT 58.724 34.615 0.00 0.00 0.00 2.52
565 566 5.998454 AGAGATTGTGTGACTGTTTTCTG 57.002 39.130 0.00 0.00 0.00 3.02
566 567 5.431765 AGAGATTGTGTGACTGTTTTCTGT 58.568 37.500 0.00 0.00 34.75 3.41
567 568 5.295292 AGAGATTGTGTGACTGTTTTCTGTG 59.705 40.000 0.00 0.00 32.26 3.66
568 569 5.185454 AGATTGTGTGACTGTTTTCTGTGA 58.815 37.500 0.00 0.00 32.26 3.58
569 570 5.824624 AGATTGTGTGACTGTTTTCTGTGAT 59.175 36.000 0.00 0.00 32.26 3.06
570 571 4.880886 TGTGTGACTGTTTTCTGTGATG 57.119 40.909 0.00 0.00 32.26 3.07
571 572 4.260985 TGTGTGACTGTTTTCTGTGATGT 58.739 39.130 0.00 0.00 32.26 3.06
572 573 4.699735 TGTGTGACTGTTTTCTGTGATGTT 59.300 37.500 0.00 0.00 32.26 2.71
573 574 5.163764 TGTGTGACTGTTTTCTGTGATGTTC 60.164 40.000 0.00 0.00 32.26 3.18
574 575 5.065218 GTGTGACTGTTTTCTGTGATGTTCT 59.935 40.000 0.00 0.00 32.26 3.01
575 576 5.647658 TGTGACTGTTTTCTGTGATGTTCTT 59.352 36.000 0.00 0.00 32.26 2.52
576 577 5.967674 GTGACTGTTTTCTGTGATGTTCTTG 59.032 40.000 0.00 0.00 32.26 3.02
577 578 5.647658 TGACTGTTTTCTGTGATGTTCTTGT 59.352 36.000 0.00 0.00 32.26 3.16
578 579 6.150976 TGACTGTTTTCTGTGATGTTCTTGTT 59.849 34.615 0.00 0.00 32.26 2.83
579 580 6.324819 ACTGTTTTCTGTGATGTTCTTGTTG 58.675 36.000 0.00 0.00 0.00 3.33
580 581 5.101628 TGTTTTCTGTGATGTTCTTGTTGC 58.898 37.500 0.00 0.00 0.00 4.17
581 582 3.607422 TTCTGTGATGTTCTTGTTGCG 57.393 42.857 0.00 0.00 0.00 4.85
582 583 2.832563 TCTGTGATGTTCTTGTTGCGA 58.167 42.857 0.00 0.00 0.00 5.10
583 584 3.402110 TCTGTGATGTTCTTGTTGCGAT 58.598 40.909 0.00 0.00 0.00 4.58
584 585 3.814842 TCTGTGATGTTCTTGTTGCGATT 59.185 39.130 0.00 0.00 0.00 3.34
585 586 4.994217 TCTGTGATGTTCTTGTTGCGATTA 59.006 37.500 0.00 0.00 0.00 1.75
586 587 5.643348 TCTGTGATGTTCTTGTTGCGATTAT 59.357 36.000 0.00 0.00 0.00 1.28
587 588 6.149308 TCTGTGATGTTCTTGTTGCGATTATT 59.851 34.615 0.00 0.00 0.00 1.40
588 589 7.333174 TCTGTGATGTTCTTGTTGCGATTATTA 59.667 33.333 0.00 0.00 0.00 0.98
589 590 7.984391 TGTGATGTTCTTGTTGCGATTATTAT 58.016 30.769 0.00 0.00 0.00 1.28
590 591 7.909641 TGTGATGTTCTTGTTGCGATTATTATG 59.090 33.333 0.00 0.00 0.00 1.90
591 592 7.910162 GTGATGTTCTTGTTGCGATTATTATGT 59.090 33.333 0.00 0.00 0.00 2.29
592 593 7.909641 TGATGTTCTTGTTGCGATTATTATGTG 59.090 33.333 0.00 0.00 0.00 3.21
593 594 7.371126 TGTTCTTGTTGCGATTATTATGTGA 57.629 32.000 0.00 0.00 0.00 3.58
594 595 7.240674 TGTTCTTGTTGCGATTATTATGTGAC 58.759 34.615 0.00 0.00 0.00 3.67
595 596 7.119116 TGTTCTTGTTGCGATTATTATGTGACT 59.881 33.333 0.00 0.00 0.00 3.41
596 597 7.003939 TCTTGTTGCGATTATTATGTGACTG 57.996 36.000 0.00 0.00 0.00 3.51
597 598 6.593770 TCTTGTTGCGATTATTATGTGACTGT 59.406 34.615 0.00 0.00 0.00 3.55
598 599 6.735678 TGTTGCGATTATTATGTGACTGTT 57.264 33.333 0.00 0.00 0.00 3.16
599 600 7.139896 TGTTGCGATTATTATGTGACTGTTT 57.860 32.000 0.00 0.00 0.00 2.83
600 601 7.589395 TGTTGCGATTATTATGTGACTGTTTT 58.411 30.769 0.00 0.00 0.00 2.43
601 602 7.748683 TGTTGCGATTATTATGTGACTGTTTTC 59.251 33.333 0.00 0.00 0.00 2.29
602 603 7.609760 TGCGATTATTATGTGACTGTTTTCT 57.390 32.000 0.00 0.00 0.00 2.52
603 604 7.463544 TGCGATTATTATGTGACTGTTTTCTG 58.536 34.615 0.00 0.00 0.00 3.02
604 605 7.119116 TGCGATTATTATGTGACTGTTTTCTGT 59.881 33.333 0.00 0.00 34.75 3.41
605 606 7.426456 GCGATTATTATGTGACTGTTTTCTGTG 59.574 37.037 0.00 0.00 32.26 3.66
606 607 7.426456 CGATTATTATGTGACTGTTTTCTGTGC 59.574 37.037 0.00 0.00 32.26 4.57
607 608 7.744087 TTATTATGTGACTGTTTTCTGTGCT 57.256 32.000 0.00 0.00 32.26 4.40
608 609 3.976793 ATGTGACTGTTTTCTGTGCTG 57.023 42.857 0.00 0.00 32.26 4.41
609 610 2.710377 TGTGACTGTTTTCTGTGCTGT 58.290 42.857 0.00 0.00 32.26 4.40
610 611 3.081061 TGTGACTGTTTTCTGTGCTGTT 58.919 40.909 0.00 0.00 32.26 3.16
611 612 4.257731 TGTGACTGTTTTCTGTGCTGTTA 58.742 39.130 0.00 0.00 32.26 2.41
612 613 4.881273 TGTGACTGTTTTCTGTGCTGTTAT 59.119 37.500 0.00 0.00 32.26 1.89
613 614 5.007626 TGTGACTGTTTTCTGTGCTGTTATC 59.992 40.000 0.00 0.00 32.26 1.75
614 615 5.237344 GTGACTGTTTTCTGTGCTGTTATCT 59.763 40.000 0.00 0.00 32.26 1.98
615 616 5.822519 TGACTGTTTTCTGTGCTGTTATCTT 59.177 36.000 0.00 0.00 32.26 2.40
685 686 6.867662 AATCACAAGTCTCTAGTTTTGTGG 57.132 37.500 20.31 10.13 46.32 4.17
825 827 1.603802 TCCGTTTCACTCGTTAGACGT 59.396 47.619 0.00 0.00 43.14 4.34
878 902 0.892358 GAACCCTTTTGACCGGTCCC 60.892 60.000 31.19 9.46 0.00 4.46
1120 1167 5.045359 GTGGGTTGGTAGAAATAGGGTTAGT 60.045 44.000 0.00 0.00 0.00 2.24
1616 1757 4.196193 CTGTGGACAAGTGAGGTTTGTTA 58.804 43.478 0.00 0.00 38.78 2.41
1617 1758 4.787551 TGTGGACAAGTGAGGTTTGTTAT 58.212 39.130 0.00 0.00 38.78 1.89
1618 1759 4.578516 TGTGGACAAGTGAGGTTTGTTATG 59.421 41.667 0.00 0.00 38.78 1.90
1619 1760 4.578928 GTGGACAAGTGAGGTTTGTTATGT 59.421 41.667 0.00 0.00 38.78 2.29
1620 1761 4.819630 TGGACAAGTGAGGTTTGTTATGTC 59.180 41.667 0.00 0.00 38.78 3.06
1621 1762 4.819630 GGACAAGTGAGGTTTGTTATGTCA 59.180 41.667 0.00 0.00 38.78 3.58
1870 2160 2.060275 TGATCCATCTTGGCCAGCTAT 58.940 47.619 5.11 0.00 37.47 2.97
2506 2919 6.645003 CCCAATATGCTGAATGTGATGAATTG 59.355 38.462 0.00 0.00 0.00 2.32
2596 3241 4.850386 ACCCTAGACTCATTTAGGTGGTTT 59.150 41.667 0.00 0.00 35.66 3.27
2597 3242 5.312443 ACCCTAGACTCATTTAGGTGGTTTT 59.688 40.000 0.00 0.00 35.66 2.43
2598 3243 6.183361 ACCCTAGACTCATTTAGGTGGTTTTT 60.183 38.462 0.00 0.00 35.66 1.94
2599 3244 6.374613 CCCTAGACTCATTTAGGTGGTTTTTC 59.625 42.308 0.00 0.00 35.66 2.29
2600 3245 5.941948 AGACTCATTTAGGTGGTTTTTCG 57.058 39.130 0.00 0.00 0.00 3.46
2601 3246 5.617252 AGACTCATTTAGGTGGTTTTTCGA 58.383 37.500 0.00 0.00 0.00 3.71
2602 3247 5.469084 AGACTCATTTAGGTGGTTTTTCGAC 59.531 40.000 0.00 0.00 0.00 4.20
2603 3248 4.212636 ACTCATTTAGGTGGTTTTTCGACG 59.787 41.667 0.00 0.00 0.00 5.12
2604 3249 4.128643 TCATTTAGGTGGTTTTTCGACGT 58.871 39.130 0.00 0.00 0.00 4.34
2605 3250 4.211794 TCATTTAGGTGGTTTTTCGACGTC 59.788 41.667 5.18 5.18 0.00 4.34
2606 3251 3.457610 TTAGGTGGTTTTTCGACGTCT 57.542 42.857 14.70 0.00 0.00 4.18
2607 3252 1.578583 AGGTGGTTTTTCGACGTCTG 58.421 50.000 14.70 7.51 0.00 3.51
2608 3253 0.584876 GGTGGTTTTTCGACGTCTGG 59.415 55.000 14.70 0.00 0.00 3.86
2609 3254 0.584876 GTGGTTTTTCGACGTCTGGG 59.415 55.000 14.70 0.00 0.00 4.45
2610 3255 1.161563 TGGTTTTTCGACGTCTGGGC 61.162 55.000 14.70 0.00 0.00 5.36
2611 3256 1.161563 GGTTTTTCGACGTCTGGGCA 61.162 55.000 14.70 0.00 0.00 5.36
2612 3257 0.041576 GTTTTTCGACGTCTGGGCAC 60.042 55.000 14.70 1.23 0.00 5.01
2628 3273 2.369394 GGCACCCAAGACTCATTTAGG 58.631 52.381 0.00 0.00 0.00 2.69
2629 3274 2.290960 GGCACCCAAGACTCATTTAGGT 60.291 50.000 0.00 0.00 0.00 3.08
2630 3275 2.749621 GCACCCAAGACTCATTTAGGTG 59.250 50.000 0.00 0.00 44.85 4.00
2631 3276 3.347216 CACCCAAGACTCATTTAGGTGG 58.653 50.000 0.00 0.00 39.67 4.61
2632 3277 2.986728 ACCCAAGACTCATTTAGGTGGT 59.013 45.455 0.00 0.00 0.00 4.16
2633 3278 3.397955 ACCCAAGACTCATTTAGGTGGTT 59.602 43.478 0.00 0.00 0.00 3.67
2634 3279 3.758554 CCCAAGACTCATTTAGGTGGTTG 59.241 47.826 0.00 0.00 0.00 3.77
2673 3318 4.225267 ACCCTAGACTCATTTAGGTGGTTG 59.775 45.833 0.00 0.00 35.66 3.77
2674 3319 4.225267 CCCTAGACTCATTTAGGTGGTTGT 59.775 45.833 0.00 0.00 35.66 3.32
2675 3320 5.280521 CCCTAGACTCATTTAGGTGGTTGTT 60.281 44.000 0.00 0.00 35.66 2.83
2676 3321 6.238648 CCTAGACTCATTTAGGTGGTTGTTT 58.761 40.000 0.00 0.00 33.29 2.83
2677 3322 6.371825 CCTAGACTCATTTAGGTGGTTGTTTC 59.628 42.308 0.00 0.00 33.29 2.78
2678 3323 4.755123 AGACTCATTTAGGTGGTTGTTTCG 59.245 41.667 0.00 0.00 0.00 3.46
2679 3324 4.710324 ACTCATTTAGGTGGTTGTTTCGA 58.290 39.130 0.00 0.00 0.00 3.71
2680 3325 5.313712 ACTCATTTAGGTGGTTGTTTCGAT 58.686 37.500 0.00 0.00 0.00 3.59
2681 3326 5.181245 ACTCATTTAGGTGGTTGTTTCGATG 59.819 40.000 0.00 0.00 0.00 3.84
2682 3327 5.067273 TCATTTAGGTGGTTGTTTCGATGT 58.933 37.500 0.00 0.00 0.00 3.06
2683 3328 5.180492 TCATTTAGGTGGTTGTTTCGATGTC 59.820 40.000 0.00 0.00 0.00 3.06
2684 3329 1.508632 AGGTGGTTGTTTCGATGTCG 58.491 50.000 0.00 0.00 41.45 4.35
2694 3339 3.592814 CGATGTCGAGGCGCCCTA 61.593 66.667 26.15 5.70 43.02 3.53
2695 3340 2.336809 GATGTCGAGGCGCCCTAG 59.663 66.667 26.15 15.34 31.76 3.02
2696 3341 2.123854 ATGTCGAGGCGCCCTAGA 60.124 61.111 26.15 17.68 33.03 2.43
2699 3344 2.516460 TCGAGGCGCCCTAGACTC 60.516 66.667 26.15 12.37 42.75 3.36
2700 3345 2.829003 CGAGGCGCCCTAGACTCA 60.829 66.667 26.15 0.00 46.44 3.41
2701 3346 2.196925 CGAGGCGCCCTAGACTCAT 61.197 63.158 26.15 0.00 46.44 2.90
2702 3347 1.739338 CGAGGCGCCCTAGACTCATT 61.739 60.000 26.15 0.00 46.44 2.57
2703 3348 0.466124 GAGGCGCCCTAGACTCATTT 59.534 55.000 26.15 0.00 45.44 2.32
2704 3349 1.687123 GAGGCGCCCTAGACTCATTTA 59.313 52.381 26.15 0.00 45.44 1.40
2705 3350 1.689273 AGGCGCCCTAGACTCATTTAG 59.311 52.381 26.15 0.00 28.47 1.85
2706 3351 1.270358 GGCGCCCTAGACTCATTTAGG 60.270 57.143 18.11 0.00 36.91 2.69
2707 3352 1.413077 GCGCCCTAGACTCATTTAGGT 59.587 52.381 0.00 0.00 35.66 3.08
2708 3353 2.803492 GCGCCCTAGACTCATTTAGGTG 60.803 54.545 0.00 0.00 35.66 4.00
2709 3354 2.224066 CGCCCTAGACTCATTTAGGTGG 60.224 54.545 0.00 0.00 35.66 4.61
2710 3355 2.772515 GCCCTAGACTCATTTAGGTGGT 59.227 50.000 0.00 0.00 35.66 4.16
2711 3356 3.200165 GCCCTAGACTCATTTAGGTGGTT 59.800 47.826 0.00 0.00 35.66 3.67
2712 3357 4.324331 GCCCTAGACTCATTTAGGTGGTTT 60.324 45.833 0.00 0.00 35.66 3.27
2713 3358 5.104652 GCCCTAGACTCATTTAGGTGGTTTA 60.105 44.000 0.00 0.00 35.66 2.01
2714 3359 6.409349 GCCCTAGACTCATTTAGGTGGTTTAT 60.409 42.308 0.00 0.00 35.66 1.40
2715 3360 7.574607 CCCTAGACTCATTTAGGTGGTTTATT 58.425 38.462 0.00 0.00 35.66 1.40
2716 3361 7.715686 CCCTAGACTCATTTAGGTGGTTTATTC 59.284 40.741 0.00 0.00 35.66 1.75
2717 3362 7.438459 CCTAGACTCATTTAGGTGGTTTATTCG 59.562 40.741 0.00 0.00 33.29 3.34
2718 3363 6.942976 AGACTCATTTAGGTGGTTTATTCGA 58.057 36.000 0.00 0.00 0.00 3.71
2719 3364 6.817140 AGACTCATTTAGGTGGTTTATTCGAC 59.183 38.462 0.00 0.00 0.00 4.20
2720 3365 5.579511 ACTCATTTAGGTGGTTTATTCGACG 59.420 40.000 0.00 0.00 0.00 5.12
2721 3366 5.481105 TCATTTAGGTGGTTTATTCGACGT 58.519 37.500 0.00 0.00 0.00 4.34
2722 3367 5.577945 TCATTTAGGTGGTTTATTCGACGTC 59.422 40.000 5.18 5.18 0.00 4.34
2723 3368 4.789012 TTAGGTGGTTTATTCGACGTCT 57.211 40.909 14.70 0.00 0.00 4.18
2724 3369 2.955614 AGGTGGTTTATTCGACGTCTG 58.044 47.619 14.70 7.51 0.00 3.51
2725 3370 1.997606 GGTGGTTTATTCGACGTCTGG 59.002 52.381 14.70 0.00 0.00 3.86
2726 3371 1.997606 GTGGTTTATTCGACGTCTGGG 59.002 52.381 14.70 0.00 0.00 4.45
2727 3372 1.004595 GGTTTATTCGACGTCTGGGC 58.995 55.000 14.70 0.00 0.00 5.36
2728 3373 1.673626 GGTTTATTCGACGTCTGGGCA 60.674 52.381 14.70 0.00 0.00 5.36
2729 3374 1.392510 GTTTATTCGACGTCTGGGCAC 59.607 52.381 14.70 0.00 0.00 5.01
2745 3390 3.477210 GGCACCCTAGACTCATTTAGG 57.523 52.381 0.00 0.00 36.91 2.69
2746 3391 2.772515 GGCACCCTAGACTCATTTAGGT 59.227 50.000 0.00 0.00 35.66 3.08
2747 3392 3.432326 GGCACCCTAGACTCATTTAGGTG 60.432 52.174 0.00 0.00 35.66 4.00
2748 3393 3.432326 GCACCCTAGACTCATTTAGGTGG 60.432 52.174 8.25 0.00 35.66 4.61
2749 3394 3.775316 CACCCTAGACTCATTTAGGTGGT 59.225 47.826 0.00 0.00 35.66 4.16
2750 3395 4.225267 CACCCTAGACTCATTTAGGTGGTT 59.775 45.833 0.00 0.00 35.66 3.67
2751 3396 4.850386 ACCCTAGACTCATTTAGGTGGTTT 59.150 41.667 0.00 0.00 35.66 3.27
2752 3397 5.312443 ACCCTAGACTCATTTAGGTGGTTTT 59.688 40.000 0.00 0.00 35.66 2.43
2753 3398 6.183361 ACCCTAGACTCATTTAGGTGGTTTTT 60.183 38.462 0.00 0.00 35.66 1.94
3071 3716 4.105727 TTTTTCGACGTCGTGGCA 57.894 50.000 34.40 15.32 40.80 4.92
3072 3717 1.637402 TTTTTCGACGTCGTGGCAC 59.363 52.632 34.40 7.79 40.80 5.01
3073 3718 1.764180 TTTTTCGACGTCGTGGCACC 61.764 55.000 34.40 0.00 40.80 5.01
3074 3719 4.651008 TTCGACGTCGTGGCACCC 62.651 66.667 34.40 1.70 40.80 4.61
3076 3721 3.740397 CGACGTCGTGGCACCCTA 61.740 66.667 29.08 0.00 34.11 3.53
3077 3722 2.181021 GACGTCGTGGCACCCTAG 59.819 66.667 12.86 3.83 0.00 3.02
3078 3723 2.282674 ACGTCGTGGCACCCTAGA 60.283 61.111 12.86 0.00 0.00 2.43
3079 3724 2.181021 CGTCGTGGCACCCTAGAC 59.819 66.667 12.86 12.23 0.00 2.59
3080 3725 2.341101 CGTCGTGGCACCCTAGACT 61.341 63.158 12.86 0.00 32.02 3.24
3081 3726 1.874345 CGTCGTGGCACCCTAGACTT 61.874 60.000 12.86 0.00 32.02 3.01
3082 3727 1.180029 GTCGTGGCACCCTAGACTTA 58.820 55.000 12.86 0.00 31.70 2.24
3083 3728 1.755380 GTCGTGGCACCCTAGACTTAT 59.245 52.381 12.86 0.00 31.70 1.73
3084 3729 2.167900 GTCGTGGCACCCTAGACTTATT 59.832 50.000 12.86 0.00 31.70 1.40
3085 3730 2.835764 TCGTGGCACCCTAGACTTATTT 59.164 45.455 12.86 0.00 0.00 1.40
3086 3731 4.025360 TCGTGGCACCCTAGACTTATTTA 58.975 43.478 12.86 0.00 0.00 1.40
3087 3732 4.098960 TCGTGGCACCCTAGACTTATTTAG 59.901 45.833 12.86 0.00 0.00 1.85
3088 3733 4.704965 GTGGCACCCTAGACTTATTTAGG 58.295 47.826 6.29 0.00 36.91 2.69
3089 3734 4.163649 GTGGCACCCTAGACTTATTTAGGT 59.836 45.833 6.29 0.00 35.66 3.08
3090 3735 4.163458 TGGCACCCTAGACTTATTTAGGTG 59.837 45.833 0.00 0.00 35.66 4.00
3091 3736 4.444449 GGCACCCTAGACTTATTTAGGTGG 60.444 50.000 8.25 0.00 35.66 4.61
3092 3737 4.163649 GCACCCTAGACTTATTTAGGTGGT 59.836 45.833 8.25 0.00 35.66 4.16
3093 3738 5.338953 GCACCCTAGACTTATTTAGGTGGTT 60.339 44.000 8.25 0.00 35.66 3.67
3094 3739 6.113411 CACCCTAGACTTATTTAGGTGGTTG 58.887 44.000 0.00 0.00 35.66 3.77
3173 4731 6.027482 ACCCTAGACTCATTTAGGTGGTTTA 58.973 40.000 0.00 0.00 35.66 2.01
3183 4818 4.789012 TTAGGTGGTTTATTCGACGTCT 57.211 40.909 14.70 0.00 0.00 4.18
3184 4819 2.955614 AGGTGGTTTATTCGACGTCTG 58.044 47.619 14.70 7.51 0.00 3.51
3212 4847 6.027482 ACCCTAGACTCATTTAGGTGGTTTA 58.973 40.000 0.00 0.00 35.66 2.01
3216 4851 8.265055 CCTAGACTCATTTAGGTGGTTTATTCA 58.735 37.037 0.00 0.00 33.29 2.57
3222 4857 6.938030 TCATTTAGGTGGTTTATTCAACGTCT 59.062 34.615 0.00 0.00 36.05 4.18
3223 4858 6.548441 TTTAGGTGGTTTATTCAACGTCTG 57.452 37.500 0.00 0.00 36.05 3.51
3269 4904 5.978919 TGATTCAAGTTCAACAAGCATCAAC 59.021 36.000 0.00 0.00 0.00 3.18
3270 4905 4.979943 TCAAGTTCAACAAGCATCAACA 57.020 36.364 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.379243 AAGCTGGCCCAGACGTCG 62.379 66.667 16.85 5.16 32.44 5.12
4 5 2.435059 GAAGCTGGCCCAGACGTC 60.435 66.667 16.85 7.70 32.44 4.34
5 6 4.021925 GGAAGCTGGCCCAGACGT 62.022 66.667 16.85 3.98 32.44 4.34
6 7 3.710722 AGGAAGCTGGCCCAGACG 61.711 66.667 16.85 0.00 32.44 4.18
7 8 2.045536 CAGGAAGCTGGCCCAGAC 60.046 66.667 16.85 5.96 32.44 3.51
66 67 3.665675 CTTCTTGGACGAGGGCGGG 62.666 68.421 0.00 0.00 43.17 6.13
67 68 2.125512 CTTCTTGGACGAGGGCGG 60.126 66.667 0.00 0.00 43.17 6.13
68 69 2.125512 CCTTCTTGGACGAGGGCG 60.126 66.667 0.00 0.00 44.79 6.13
69 70 1.219393 CTCCTTCTTGGACGAGGGC 59.781 63.158 0.00 0.00 40.56 5.19
70 71 1.219393 GCTCCTTCTTGGACGAGGG 59.781 63.158 0.00 0.00 40.56 4.30
71 72 0.174617 GAGCTCCTTCTTGGACGAGG 59.825 60.000 0.87 0.00 40.56 4.63
72 73 1.181786 AGAGCTCCTTCTTGGACGAG 58.818 55.000 10.93 0.00 40.56 4.18
73 74 1.546476 GAAGAGCTCCTTCTTGGACGA 59.454 52.381 10.93 0.00 46.03 4.20
74 75 2.003196 GAAGAGCTCCTTCTTGGACG 57.997 55.000 10.93 0.00 46.03 4.79
84 85 2.762043 AGGCGGAGGAAGAGCTCC 60.762 66.667 10.93 0.00 45.81 4.70
85 86 1.734388 GAGAGGCGGAGGAAGAGCTC 61.734 65.000 5.27 5.27 0.00 4.09
86 87 1.756561 GAGAGGCGGAGGAAGAGCT 60.757 63.158 0.00 0.00 0.00 4.09
87 88 2.791868 GGAGAGGCGGAGGAAGAGC 61.792 68.421 0.00 0.00 0.00 4.09
88 89 2.485795 CGGAGAGGCGGAGGAAGAG 61.486 68.421 0.00 0.00 0.00 2.85
89 90 2.440430 CGGAGAGGCGGAGGAAGA 60.440 66.667 0.00 0.00 0.00 2.87
90 91 4.214327 GCGGAGAGGCGGAGGAAG 62.214 72.222 0.00 0.00 0.00 3.46
111 112 4.075793 TCCTGGAGGAGGACGGGG 62.076 72.222 0.00 0.00 46.96 5.73
117 118 2.040278 AGCCTGTCCTGGAGGAGG 59.960 66.667 14.86 14.86 46.49 4.30
118 119 2.422231 CGAGCCTGTCCTGGAGGAG 61.422 68.421 6.18 1.32 46.49 3.69
119 120 2.363018 CGAGCCTGTCCTGGAGGA 60.363 66.667 6.18 0.00 43.08 3.71
120 121 2.681778 ACGAGCCTGTCCTGGAGG 60.682 66.667 0.00 0.00 0.00 4.30
121 122 2.575993 CACGAGCCTGTCCTGGAG 59.424 66.667 0.00 0.00 0.00 3.86
122 123 2.435120 TACCACGAGCCTGTCCTGGA 62.435 60.000 0.00 0.00 35.47 3.86
123 124 1.982395 TACCACGAGCCTGTCCTGG 60.982 63.158 0.00 0.00 37.37 4.45
124 125 1.215647 GTACCACGAGCCTGTCCTG 59.784 63.158 0.00 0.00 0.00 3.86
125 126 2.341101 CGTACCACGAGCCTGTCCT 61.341 63.158 0.00 0.00 46.05 3.85
126 127 1.308069 TACGTACCACGAGCCTGTCC 61.308 60.000 5.61 0.00 46.05 4.02
127 128 0.179179 GTACGTACCACGAGCCTGTC 60.179 60.000 15.00 0.00 46.05 3.51
128 129 0.607489 AGTACGTACCACGAGCCTGT 60.607 55.000 21.80 0.00 46.05 4.00
129 130 1.063174 GTAGTACGTACCACGAGCCTG 59.937 57.143 21.80 0.00 46.05 4.85
130 131 1.373570 GTAGTACGTACCACGAGCCT 58.626 55.000 21.80 3.67 46.05 4.58
131 132 3.905900 GTAGTACGTACCACGAGCC 57.094 57.895 21.80 0.00 46.05 4.70
144 145 1.283029 AGGGTGAGCGTACAGGTAGTA 59.717 52.381 0.00 0.00 0.00 1.82
145 146 0.039326 AGGGTGAGCGTACAGGTAGT 59.961 55.000 0.00 0.00 0.00 2.73
146 147 0.456221 CAGGGTGAGCGTACAGGTAG 59.544 60.000 0.00 0.00 0.00 3.18
147 148 1.601419 GCAGGGTGAGCGTACAGGTA 61.601 60.000 0.00 0.00 0.00 3.08
148 149 2.943978 GCAGGGTGAGCGTACAGGT 61.944 63.158 0.00 0.00 0.00 4.00
149 150 2.125512 GCAGGGTGAGCGTACAGG 60.126 66.667 0.00 0.00 0.00 4.00
150 151 1.320344 TAGGCAGGGTGAGCGTACAG 61.320 60.000 0.00 0.00 0.00 2.74
151 152 1.304630 TAGGCAGGGTGAGCGTACA 60.305 57.895 0.00 0.00 0.00 2.90
152 153 1.437986 CTAGGCAGGGTGAGCGTAC 59.562 63.158 0.00 0.00 0.00 3.67
153 154 2.423898 GCTAGGCAGGGTGAGCGTA 61.424 63.158 0.00 0.00 0.00 4.42
154 155 2.856039 TAGCTAGGCAGGGTGAGCGT 62.856 60.000 0.00 0.00 39.96 5.07
155 156 2.081425 CTAGCTAGGCAGGGTGAGCG 62.081 65.000 13.32 0.00 39.96 5.03
156 157 1.745264 CTAGCTAGGCAGGGTGAGC 59.255 63.158 13.32 0.00 35.07 4.26
157 158 0.758685 AGCTAGCTAGGCAGGGTGAG 60.759 60.000 17.69 0.00 0.00 3.51
158 159 0.757188 GAGCTAGCTAGGCAGGGTGA 60.757 60.000 19.38 0.00 0.00 4.02
159 160 1.745264 GAGCTAGCTAGGCAGGGTG 59.255 63.158 19.38 0.00 0.00 4.61
160 161 1.458588 GGAGCTAGCTAGGCAGGGT 60.459 63.158 19.38 1.92 0.00 4.34
161 162 1.152355 AGGAGCTAGCTAGGCAGGG 60.152 63.158 19.38 0.00 0.00 4.45
162 163 1.523154 CGAGGAGCTAGCTAGGCAGG 61.523 65.000 19.38 1.29 0.00 4.85
163 164 1.523154 CCGAGGAGCTAGCTAGGCAG 61.523 65.000 19.38 8.38 0.00 4.85
164 165 1.529478 CCGAGGAGCTAGCTAGGCA 60.529 63.158 19.38 0.00 0.00 4.75
165 166 2.926420 GCCGAGGAGCTAGCTAGGC 61.926 68.421 26.41 26.41 36.08 3.93
166 167 2.272447 GGCCGAGGAGCTAGCTAGG 61.272 68.421 19.38 18.72 0.00 3.02
167 168 2.622011 CGGCCGAGGAGCTAGCTAG 61.622 68.421 24.07 16.84 0.00 3.42
168 169 2.594882 CGGCCGAGGAGCTAGCTA 60.595 66.667 24.07 0.00 0.00 3.32
181 182 4.593864 GAGACTCATCGGCCGGCC 62.594 72.222 36.69 36.69 0.00 6.13
182 183 1.735376 TTAGAGACTCATCGGCCGGC 61.735 60.000 27.83 21.18 0.00 6.13
183 184 0.962489 ATTAGAGACTCATCGGCCGG 59.038 55.000 27.83 11.94 0.00 6.13
184 185 1.609072 TGATTAGAGACTCATCGGCCG 59.391 52.381 22.12 22.12 0.00 6.13
185 186 3.068873 ACTTGATTAGAGACTCATCGGCC 59.931 47.826 5.02 0.00 0.00 6.13
186 187 4.047822 CACTTGATTAGAGACTCATCGGC 58.952 47.826 5.02 0.00 0.00 5.54
187 188 4.615949 CCACTTGATTAGAGACTCATCGG 58.384 47.826 5.02 0.76 0.00 4.18
188 189 4.047822 GCCACTTGATTAGAGACTCATCG 58.952 47.826 5.02 0.00 0.00 3.84
189 190 5.275067 AGCCACTTGATTAGAGACTCATC 57.725 43.478 5.02 0.60 0.00 2.92
190 191 5.690464 AAGCCACTTGATTAGAGACTCAT 57.310 39.130 5.02 0.00 0.00 2.90
191 192 5.012046 TCAAAGCCACTTGATTAGAGACTCA 59.988 40.000 5.02 0.00 30.31 3.41
192 193 5.482908 TCAAAGCCACTTGATTAGAGACTC 58.517 41.667 0.00 0.00 30.31 3.36
193 194 5.489792 TCAAAGCCACTTGATTAGAGACT 57.510 39.130 0.00 0.00 30.31 3.24
194 195 5.065731 CCATCAAAGCCACTTGATTAGAGAC 59.934 44.000 4.07 0.00 42.16 3.36
195 196 5.188434 CCATCAAAGCCACTTGATTAGAGA 58.812 41.667 4.07 0.00 42.16 3.10
196 197 4.946157 ACCATCAAAGCCACTTGATTAGAG 59.054 41.667 4.07 0.00 42.16 2.43
197 198 4.701651 CACCATCAAAGCCACTTGATTAGA 59.298 41.667 4.07 0.00 42.16 2.10
198 199 4.142315 CCACCATCAAAGCCACTTGATTAG 60.142 45.833 4.07 2.76 42.16 1.73
199 200 3.763360 CCACCATCAAAGCCACTTGATTA 59.237 43.478 4.07 0.00 42.16 1.75
200 201 2.564062 CCACCATCAAAGCCACTTGATT 59.436 45.455 4.07 0.00 42.16 2.57
201 202 2.173519 CCACCATCAAAGCCACTTGAT 58.826 47.619 1.46 1.46 44.98 2.57
202 203 1.133513 ACCACCATCAAAGCCACTTGA 60.134 47.619 0.00 0.00 39.56 3.02
203 204 1.000060 CACCACCATCAAAGCCACTTG 60.000 52.381 0.00 0.00 0.00 3.16
204 205 1.331214 CACCACCATCAAAGCCACTT 58.669 50.000 0.00 0.00 0.00 3.16
205 206 0.185901 ACACCACCATCAAAGCCACT 59.814 50.000 0.00 0.00 0.00 4.00
206 207 0.314935 CACACCACCATCAAAGCCAC 59.685 55.000 0.00 0.00 0.00 5.01
207 208 1.462731 GCACACCACCATCAAAGCCA 61.463 55.000 0.00 0.00 0.00 4.75
208 209 1.290009 GCACACCACCATCAAAGCC 59.710 57.895 0.00 0.00 0.00 4.35
209 210 1.081242 CGCACACCACCATCAAAGC 60.081 57.895 0.00 0.00 0.00 3.51
210 211 0.040157 CACGCACACCACCATCAAAG 60.040 55.000 0.00 0.00 0.00 2.77
211 212 2.028936 CACGCACACCACCATCAAA 58.971 52.632 0.00 0.00 0.00 2.69
212 213 2.551006 GCACGCACACCACCATCAA 61.551 57.895 0.00 0.00 0.00 2.57
213 214 2.977456 GCACGCACACCACCATCA 60.977 61.111 0.00 0.00 0.00 3.07
214 215 4.088762 CGCACGCACACCACCATC 62.089 66.667 0.00 0.00 0.00 3.51
231 232 3.763786 CTCTTCAGATTGCGCGCGC 62.764 63.158 45.02 45.02 42.35 6.86
232 233 2.319032 CTCTTCAGATTGCGCGCG 59.681 61.111 28.44 28.44 0.00 6.86
233 234 2.022484 GCTCTTCAGATTGCGCGC 59.978 61.111 27.26 27.26 0.00 6.86
234 235 0.315951 CATGCTCTTCAGATTGCGCG 60.316 55.000 0.00 0.00 0.00 6.86
235 236 0.731417 ACATGCTCTTCAGATTGCGC 59.269 50.000 0.00 0.00 0.00 6.09
236 237 1.063616 CCACATGCTCTTCAGATTGCG 59.936 52.381 0.00 0.00 0.00 4.85
237 238 1.404391 CCCACATGCTCTTCAGATTGC 59.596 52.381 0.00 0.00 0.00 3.56
238 239 2.422479 CACCCACATGCTCTTCAGATTG 59.578 50.000 0.00 0.00 0.00 2.67
239 240 2.619849 CCACCCACATGCTCTTCAGATT 60.620 50.000 0.00 0.00 0.00 2.40
240 241 1.064906 CCACCCACATGCTCTTCAGAT 60.065 52.381 0.00 0.00 0.00 2.90
241 242 0.325933 CCACCCACATGCTCTTCAGA 59.674 55.000 0.00 0.00 0.00 3.27
242 243 0.325933 TCCACCCACATGCTCTTCAG 59.674 55.000 0.00 0.00 0.00 3.02
243 244 0.036732 GTCCACCCACATGCTCTTCA 59.963 55.000 0.00 0.00 0.00 3.02
244 245 0.036732 TGTCCACCCACATGCTCTTC 59.963 55.000 0.00 0.00 0.00 2.87
245 246 0.037303 CTGTCCACCCACATGCTCTT 59.963 55.000 0.00 0.00 0.00 2.85
246 247 1.681666 CTGTCCACCCACATGCTCT 59.318 57.895 0.00 0.00 0.00 4.09
247 248 1.377725 CCTGTCCACCCACATGCTC 60.378 63.158 0.00 0.00 0.00 4.26
248 249 2.759114 CCTGTCCACCCACATGCT 59.241 61.111 0.00 0.00 0.00 3.79
249 250 2.361610 CCCTGTCCACCCACATGC 60.362 66.667 0.00 0.00 0.00 4.06
250 251 1.300963 CTCCCTGTCCACCCACATG 59.699 63.158 0.00 0.00 0.00 3.21
251 252 1.925455 CCTCCCTGTCCACCCACAT 60.925 63.158 0.00 0.00 0.00 3.21
252 253 2.529136 CCTCCCTGTCCACCCACA 60.529 66.667 0.00 0.00 0.00 4.17
253 254 4.035102 GCCTCCCTGTCCACCCAC 62.035 72.222 0.00 0.00 0.00 4.61
289 290 3.959991 GAGGTTCCAGGCGGACAGC 62.960 68.421 0.00 0.00 42.67 4.40
290 291 2.266055 GAGGTTCCAGGCGGACAG 59.734 66.667 0.00 0.00 42.67 3.51
291 292 3.319198 GGAGGTTCCAGGCGGACA 61.319 66.667 0.00 0.00 42.67 4.02
292 293 3.319198 TGGAGGTTCCAGGCGGAC 61.319 66.667 0.00 0.00 42.67 4.79
299 300 1.911766 GGACGGACTGGAGGTTCCA 60.912 63.158 0.00 0.00 45.98 3.53
300 301 1.609794 AGGACGGACTGGAGGTTCC 60.610 63.158 0.00 0.00 36.96 3.62
301 302 1.186267 ACAGGACGGACTGGAGGTTC 61.186 60.000 12.34 0.00 42.75 3.62
302 303 1.152312 ACAGGACGGACTGGAGGTT 60.152 57.895 12.34 0.00 42.75 3.50
303 304 1.606889 GACAGGACGGACTGGAGGT 60.607 63.158 12.34 0.00 42.75 3.85
304 305 2.701780 CGACAGGACGGACTGGAGG 61.702 68.421 12.34 0.00 42.75 4.30
305 306 2.878429 CGACAGGACGGACTGGAG 59.122 66.667 12.34 3.26 42.75 3.86
325 326 2.202974 GGGTAATCGGGCGTGTCC 60.203 66.667 0.00 0.00 0.00 4.02
326 327 2.584143 CGGGTAATCGGGCGTGTC 60.584 66.667 0.00 0.00 0.00 3.67
327 328 3.069946 TCGGGTAATCGGGCGTGT 61.070 61.111 0.00 0.00 0.00 4.49
328 329 2.279252 CTCGGGTAATCGGGCGTG 60.279 66.667 0.00 0.00 0.00 5.34
329 330 2.440796 TCTCGGGTAATCGGGCGT 60.441 61.111 0.00 0.00 0.00 5.68
330 331 2.027169 GTCTCGGGTAATCGGGCG 59.973 66.667 0.00 0.00 0.00 6.13
331 332 2.027169 CGTCTCGGGTAATCGGGC 59.973 66.667 0.00 0.00 0.00 6.13
332 333 2.726274 CCGTCTCGGGTAATCGGG 59.274 66.667 0.00 0.00 44.15 5.14
342 343 3.812019 CGAGTGGGACCCGTCTCG 61.812 72.222 29.95 29.95 41.15 4.04
343 344 2.360852 TCGAGTGGGACCCGTCTC 60.361 66.667 19.64 19.64 0.00 3.36
344 345 2.675772 GTCGAGTGGGACCCGTCT 60.676 66.667 5.91 6.90 0.00 4.18
345 346 4.112341 CGTCGAGTGGGACCCGTC 62.112 72.222 5.91 4.24 33.30 4.79
346 347 4.648626 TCGTCGAGTGGGACCCGT 62.649 66.667 5.91 0.00 33.30 5.28
347 348 4.112341 GTCGTCGAGTGGGACCCG 62.112 72.222 5.91 0.00 33.30 5.28
348 349 2.675772 AGTCGTCGAGTGGGACCC 60.676 66.667 2.45 2.45 33.30 4.46
349 350 1.242665 AAGAGTCGTCGAGTGGGACC 61.243 60.000 7.45 0.00 33.30 4.46
350 351 0.168568 GAAGAGTCGTCGAGTGGGAC 59.831 60.000 7.45 0.00 0.00 4.46
351 352 0.036448 AGAAGAGTCGTCGAGTGGGA 59.964 55.000 7.45 0.00 0.00 4.37
352 353 1.666700 CTAGAAGAGTCGTCGAGTGGG 59.333 57.143 7.45 0.00 0.00 4.61
353 354 1.666700 CCTAGAAGAGTCGTCGAGTGG 59.333 57.143 7.45 0.00 0.00 4.00
354 355 2.348660 ACCTAGAAGAGTCGTCGAGTG 58.651 52.381 7.45 8.52 0.00 3.51
355 356 2.743126 CAACCTAGAAGAGTCGTCGAGT 59.257 50.000 13.42 1.22 0.00 4.18
356 357 2.096174 CCAACCTAGAAGAGTCGTCGAG 59.904 54.545 8.81 8.81 0.00 4.04
357 358 2.082231 CCAACCTAGAAGAGTCGTCGA 58.918 52.381 0.15 0.00 0.00 4.20
358 359 1.811359 ACCAACCTAGAAGAGTCGTCG 59.189 52.381 0.15 0.00 0.00 5.12
359 360 3.670091 CGAACCAACCTAGAAGAGTCGTC 60.670 52.174 0.00 0.00 0.00 4.20
360 361 2.228343 CGAACCAACCTAGAAGAGTCGT 59.772 50.000 0.00 0.00 0.00 4.34
361 362 2.864968 CGAACCAACCTAGAAGAGTCG 58.135 52.381 0.00 0.00 0.00 4.18
362 363 2.231721 AGCGAACCAACCTAGAAGAGTC 59.768 50.000 0.00 0.00 0.00 3.36
363 364 2.231721 GAGCGAACCAACCTAGAAGAGT 59.768 50.000 0.00 0.00 0.00 3.24
364 365 2.417515 GGAGCGAACCAACCTAGAAGAG 60.418 54.545 0.00 0.00 0.00 2.85
365 366 1.549170 GGAGCGAACCAACCTAGAAGA 59.451 52.381 0.00 0.00 0.00 2.87
366 367 1.550976 AGGAGCGAACCAACCTAGAAG 59.449 52.381 0.00 0.00 0.00 2.85
367 368 1.549170 GAGGAGCGAACCAACCTAGAA 59.451 52.381 0.00 0.00 32.53 2.10
368 369 1.183549 GAGGAGCGAACCAACCTAGA 58.816 55.000 0.00 0.00 32.53 2.43
369 370 0.175989 GGAGGAGCGAACCAACCTAG 59.824 60.000 0.00 0.00 32.53 3.02
370 371 0.543410 TGGAGGAGCGAACCAACCTA 60.543 55.000 0.00 0.00 32.53 3.08
371 372 1.201429 ATGGAGGAGCGAACCAACCT 61.201 55.000 0.00 0.00 37.24 3.50
372 373 0.744771 GATGGAGGAGCGAACCAACC 60.745 60.000 0.00 0.00 37.24 3.77
373 374 0.250513 AGATGGAGGAGCGAACCAAC 59.749 55.000 0.00 0.00 37.24 3.77
374 375 0.537188 GAGATGGAGGAGCGAACCAA 59.463 55.000 0.00 0.00 37.24 3.67
375 376 1.330655 GGAGATGGAGGAGCGAACCA 61.331 60.000 0.00 0.00 38.09 3.67
376 377 1.330655 TGGAGATGGAGGAGCGAACC 61.331 60.000 0.00 0.00 0.00 3.62
377 378 0.755686 ATGGAGATGGAGGAGCGAAC 59.244 55.000 0.00 0.00 0.00 3.95
378 379 0.755079 CATGGAGATGGAGGAGCGAA 59.245 55.000 0.00 0.00 0.00 4.70
379 380 1.752358 GCATGGAGATGGAGGAGCGA 61.752 60.000 0.00 0.00 0.00 4.93
380 381 1.301558 GCATGGAGATGGAGGAGCG 60.302 63.158 0.00 0.00 0.00 5.03
381 382 0.534652 GTGCATGGAGATGGAGGAGC 60.535 60.000 0.00 0.00 29.21 4.70
382 383 0.835276 TGTGCATGGAGATGGAGGAG 59.165 55.000 0.00 0.00 29.21 3.69
383 384 1.288188 TTGTGCATGGAGATGGAGGA 58.712 50.000 0.00 0.00 29.21 3.71
384 385 2.359981 ATTGTGCATGGAGATGGAGG 57.640 50.000 0.00 0.00 29.21 4.30
385 386 3.813724 CAGTATTGTGCATGGAGATGGAG 59.186 47.826 0.00 0.00 29.21 3.86
386 387 3.812262 CAGTATTGTGCATGGAGATGGA 58.188 45.455 0.00 0.00 0.00 3.41
387 388 2.292569 GCAGTATTGTGCATGGAGATGG 59.707 50.000 0.00 0.00 43.41 3.51
388 389 3.211865 AGCAGTATTGTGCATGGAGATG 58.788 45.455 0.00 0.00 46.60 2.90
389 390 3.572632 AGCAGTATTGTGCATGGAGAT 57.427 42.857 0.00 0.00 46.60 2.75
390 391 3.452264 AGTAGCAGTATTGTGCATGGAGA 59.548 43.478 0.00 0.00 46.60 3.71
391 392 3.801698 AGTAGCAGTATTGTGCATGGAG 58.198 45.455 0.00 0.00 46.60 3.86
392 393 3.912496 AGTAGCAGTATTGTGCATGGA 57.088 42.857 0.00 0.00 46.60 3.41
393 394 4.697514 AGTAGTAGCAGTATTGTGCATGG 58.302 43.478 0.00 0.00 46.60 3.66
394 395 5.812127 TCAAGTAGTAGCAGTATTGTGCATG 59.188 40.000 0.00 0.00 46.60 4.06
395 396 5.977635 TCAAGTAGTAGCAGTATTGTGCAT 58.022 37.500 0.00 0.00 46.60 3.96
396 397 5.400066 TCAAGTAGTAGCAGTATTGTGCA 57.600 39.130 0.00 0.00 46.60 4.57
397 398 6.721571 TTTCAAGTAGTAGCAGTATTGTGC 57.278 37.500 0.00 0.00 44.35 4.57
398 399 8.383619 GTGATTTCAAGTAGTAGCAGTATTGTG 58.616 37.037 0.00 0.00 0.00 3.33
399 400 8.314751 AGTGATTTCAAGTAGTAGCAGTATTGT 58.685 33.333 0.00 0.00 0.00 2.71
400 401 8.709386 AGTGATTTCAAGTAGTAGCAGTATTG 57.291 34.615 0.00 0.00 0.00 1.90
401 402 9.726438 AAAGTGATTTCAAGTAGTAGCAGTATT 57.274 29.630 0.00 0.00 0.00 1.89
402 403 9.726438 AAAAGTGATTTCAAGTAGTAGCAGTAT 57.274 29.630 0.00 0.00 0.00 2.12
403 404 9.555727 AAAAAGTGATTTCAAGTAGTAGCAGTA 57.444 29.630 0.00 0.00 0.00 2.74
404 405 8.345565 CAAAAAGTGATTTCAAGTAGTAGCAGT 58.654 33.333 0.00 0.00 0.00 4.40
405 406 7.805071 CCAAAAAGTGATTTCAAGTAGTAGCAG 59.195 37.037 0.00 0.00 0.00 4.24
406 407 7.284489 ACCAAAAAGTGATTTCAAGTAGTAGCA 59.716 33.333 0.00 0.00 0.00 3.49
407 408 7.649057 ACCAAAAAGTGATTTCAAGTAGTAGC 58.351 34.615 0.00 0.00 0.00 3.58
467 468 9.270640 CCTAATCTCGAAATGAAATTGATCTCT 57.729 33.333 0.00 0.00 36.10 3.10
468 469 9.265901 TCCTAATCTCGAAATGAAATTGATCTC 57.734 33.333 0.00 0.00 36.10 2.75
469 470 9.790344 ATCCTAATCTCGAAATGAAATTGATCT 57.210 29.630 0.00 0.00 36.10 2.75
470 471 9.823098 CATCCTAATCTCGAAATGAAATTGATC 57.177 33.333 0.00 0.00 36.10 2.92
471 472 9.565090 TCATCCTAATCTCGAAATGAAATTGAT 57.435 29.630 0.00 0.00 36.10 2.57
472 473 8.962884 TCATCCTAATCTCGAAATGAAATTGA 57.037 30.769 0.00 0.00 36.10 2.57
473 474 9.608617 CATCATCCTAATCTCGAAATGAAATTG 57.391 33.333 0.00 0.00 36.10 2.32
474 475 9.347240 ACATCATCCTAATCTCGAAATGAAATT 57.653 29.630 0.00 0.00 38.98 1.82
475 476 8.915057 ACATCATCCTAATCTCGAAATGAAAT 57.085 30.769 0.00 0.00 0.00 2.17
476 477 8.615211 CAACATCATCCTAATCTCGAAATGAAA 58.385 33.333 0.00 0.00 0.00 2.69
477 478 7.254898 GCAACATCATCCTAATCTCGAAATGAA 60.255 37.037 0.00 0.00 0.00 2.57
478 479 6.203530 GCAACATCATCCTAATCTCGAAATGA 59.796 38.462 0.00 0.00 0.00 2.57
479 480 6.369005 GCAACATCATCCTAATCTCGAAATG 58.631 40.000 0.00 0.00 0.00 2.32
480 481 5.178252 CGCAACATCATCCTAATCTCGAAAT 59.822 40.000 0.00 0.00 0.00 2.17
481 482 4.507756 CGCAACATCATCCTAATCTCGAAA 59.492 41.667 0.00 0.00 0.00 3.46
482 483 4.051237 CGCAACATCATCCTAATCTCGAA 58.949 43.478 0.00 0.00 0.00 3.71
483 484 3.642705 CGCAACATCATCCTAATCTCGA 58.357 45.455 0.00 0.00 0.00 4.04
484 485 2.156504 GCGCAACATCATCCTAATCTCG 59.843 50.000 0.30 0.00 0.00 4.04
485 486 3.133691 TGCGCAACATCATCCTAATCTC 58.866 45.455 8.16 0.00 0.00 2.75
486 487 3.198409 TGCGCAACATCATCCTAATCT 57.802 42.857 8.16 0.00 0.00 2.40
487 488 3.818387 CATGCGCAACATCATCCTAATC 58.182 45.455 17.11 0.00 36.64 1.75
488 489 2.030540 GCATGCGCAACATCATCCTAAT 60.031 45.455 17.11 0.00 36.64 1.73
489 490 1.334556 GCATGCGCAACATCATCCTAA 59.665 47.619 17.11 0.00 36.64 2.69
490 491 0.946528 GCATGCGCAACATCATCCTA 59.053 50.000 17.11 0.00 36.64 2.94
491 492 0.750546 AGCATGCGCAACATCATCCT 60.751 50.000 17.11 0.00 42.27 3.24
492 493 0.946528 TAGCATGCGCAACATCATCC 59.053 50.000 17.11 0.00 42.27 3.51
493 494 2.032550 AGTTAGCATGCGCAACATCATC 59.967 45.455 28.46 2.74 42.27 2.92
494 495 2.019249 AGTTAGCATGCGCAACATCAT 58.981 42.857 28.46 13.39 42.27 2.45
495 496 1.452110 AGTTAGCATGCGCAACATCA 58.548 45.000 28.46 0.00 42.27 3.07
496 497 2.096496 AGAAGTTAGCATGCGCAACATC 59.904 45.455 28.46 26.16 42.27 3.06
497 498 2.086869 AGAAGTTAGCATGCGCAACAT 58.913 42.857 28.46 21.56 42.27 2.71
498 499 1.522668 AGAAGTTAGCATGCGCAACA 58.477 45.000 28.46 0.00 42.27 3.33
499 500 2.245096 CAAGAAGTTAGCATGCGCAAC 58.755 47.619 17.11 23.00 42.27 4.17
500 501 1.879380 ACAAGAAGTTAGCATGCGCAA 59.121 42.857 17.11 7.90 42.27 4.85
501 502 1.522668 ACAAGAAGTTAGCATGCGCA 58.477 45.000 14.96 14.96 42.27 6.09
502 503 2.245096 CAACAAGAAGTTAGCATGCGC 58.755 47.619 13.01 0.00 38.74 6.09
503 504 2.095567 AGCAACAAGAAGTTAGCATGCG 60.096 45.455 13.01 0.00 38.74 4.73
504 505 3.565905 AGCAACAAGAAGTTAGCATGC 57.434 42.857 10.51 10.51 38.74 4.06
505 506 4.913924 GTGAAGCAACAAGAAGTTAGCATG 59.086 41.667 0.00 0.00 38.74 4.06
506 507 4.580167 TGTGAAGCAACAAGAAGTTAGCAT 59.420 37.500 0.00 0.00 38.74 3.79
507 508 3.944650 TGTGAAGCAACAAGAAGTTAGCA 59.055 39.130 0.00 0.00 38.74 3.49
508 509 4.201910 TGTGTGAAGCAACAAGAAGTTAGC 60.202 41.667 0.00 0.00 38.74 3.09
509 510 5.484173 TGTGTGAAGCAACAAGAAGTTAG 57.516 39.130 0.00 0.00 38.74 2.34
510 511 7.561021 TTATGTGTGAAGCAACAAGAAGTTA 57.439 32.000 0.00 0.00 38.74 2.24
511 512 4.989279 ATGTGTGAAGCAACAAGAAGTT 57.011 36.364 0.00 0.00 42.42 2.66
512 513 6.265577 GTTTATGTGTGAAGCAACAAGAAGT 58.734 36.000 0.00 0.00 0.00 3.01
513 514 5.396362 CGTTTATGTGTGAAGCAACAAGAAG 59.604 40.000 0.00 0.00 0.00 2.85
514 515 5.065346 TCGTTTATGTGTGAAGCAACAAGAA 59.935 36.000 0.00 0.00 0.00 2.52
515 516 4.572795 TCGTTTATGTGTGAAGCAACAAGA 59.427 37.500 0.00 0.00 0.00 3.02
516 517 4.843147 TCGTTTATGTGTGAAGCAACAAG 58.157 39.130 0.00 0.00 0.00 3.16
517 518 4.884458 TCGTTTATGTGTGAAGCAACAA 57.116 36.364 0.00 0.00 0.00 2.83
518 519 4.334203 AGTTCGTTTATGTGTGAAGCAACA 59.666 37.500 0.00 0.00 0.00 3.33
519 520 4.844267 AGTTCGTTTATGTGTGAAGCAAC 58.156 39.130 0.00 0.00 0.00 4.17
520 521 5.493133 AAGTTCGTTTATGTGTGAAGCAA 57.507 34.783 0.00 0.00 0.00 3.91
521 522 5.986741 TCTAAGTTCGTTTATGTGTGAAGCA 59.013 36.000 0.00 0.00 0.00 3.91
522 523 6.365247 TCTCTAAGTTCGTTTATGTGTGAAGC 59.635 38.462 0.00 0.00 0.00 3.86
523 524 7.869016 TCTCTAAGTTCGTTTATGTGTGAAG 57.131 36.000 0.00 0.00 0.00 3.02
524 525 8.708742 CAATCTCTAAGTTCGTTTATGTGTGAA 58.291 33.333 0.00 0.00 0.00 3.18
525 526 7.870954 ACAATCTCTAAGTTCGTTTATGTGTGA 59.129 33.333 0.00 0.00 0.00 3.58
526 527 7.952101 CACAATCTCTAAGTTCGTTTATGTGTG 59.048 37.037 0.00 0.00 0.00 3.82
527 528 7.656137 ACACAATCTCTAAGTTCGTTTATGTGT 59.344 33.333 0.00 0.00 40.94 3.72
528 529 7.952101 CACACAATCTCTAAGTTCGTTTATGTG 59.048 37.037 0.00 0.00 39.21 3.21
529 530 7.870954 TCACACAATCTCTAAGTTCGTTTATGT 59.129 33.333 0.00 0.00 0.00 2.29
530 531 8.162880 GTCACACAATCTCTAAGTTCGTTTATG 58.837 37.037 0.00 0.00 0.00 1.90
531 532 8.088981 AGTCACACAATCTCTAAGTTCGTTTAT 58.911 33.333 0.00 0.00 0.00 1.40
532 533 7.381408 CAGTCACACAATCTCTAAGTTCGTTTA 59.619 37.037 0.00 0.00 0.00 2.01
533 534 6.201044 CAGTCACACAATCTCTAAGTTCGTTT 59.799 38.462 0.00 0.00 0.00 3.60
534 535 5.692204 CAGTCACACAATCTCTAAGTTCGTT 59.308 40.000 0.00 0.00 0.00 3.85
535 536 5.221263 ACAGTCACACAATCTCTAAGTTCGT 60.221 40.000 0.00 0.00 0.00 3.85
536 537 5.223382 ACAGTCACACAATCTCTAAGTTCG 58.777 41.667 0.00 0.00 0.00 3.95
537 538 7.484035 AAACAGTCACACAATCTCTAAGTTC 57.516 36.000 0.00 0.00 0.00 3.01
538 539 7.770897 AGAAAACAGTCACACAATCTCTAAGTT 59.229 33.333 0.00 0.00 0.00 2.66
539 540 7.225538 CAGAAAACAGTCACACAATCTCTAAGT 59.774 37.037 0.00 0.00 0.00 2.24
540 541 7.225538 ACAGAAAACAGTCACACAATCTCTAAG 59.774 37.037 0.00 0.00 0.00 2.18
541 542 7.011389 CACAGAAAACAGTCACACAATCTCTAA 59.989 37.037 0.00 0.00 0.00 2.10
542 543 6.479990 CACAGAAAACAGTCACACAATCTCTA 59.520 38.462 0.00 0.00 0.00 2.43
543 544 5.295292 CACAGAAAACAGTCACACAATCTCT 59.705 40.000 0.00 0.00 0.00 3.10
544 545 5.294306 TCACAGAAAACAGTCACACAATCTC 59.706 40.000 0.00 0.00 0.00 2.75
545 546 5.185454 TCACAGAAAACAGTCACACAATCT 58.815 37.500 0.00 0.00 0.00 2.40
546 547 5.484173 TCACAGAAAACAGTCACACAATC 57.516 39.130 0.00 0.00 0.00 2.67
547 548 5.357878 ACATCACAGAAAACAGTCACACAAT 59.642 36.000 0.00 0.00 0.00 2.71
548 549 4.699735 ACATCACAGAAAACAGTCACACAA 59.300 37.500 0.00 0.00 0.00 3.33
549 550 4.260985 ACATCACAGAAAACAGTCACACA 58.739 39.130 0.00 0.00 0.00 3.72
550 551 4.882671 ACATCACAGAAAACAGTCACAC 57.117 40.909 0.00 0.00 0.00 3.82
551 552 5.185454 AGAACATCACAGAAAACAGTCACA 58.815 37.500 0.00 0.00 0.00 3.58
552 553 5.741388 AGAACATCACAGAAAACAGTCAC 57.259 39.130 0.00 0.00 0.00 3.67
553 554 5.647658 ACAAGAACATCACAGAAAACAGTCA 59.352 36.000 0.00 0.00 0.00 3.41
554 555 6.124088 ACAAGAACATCACAGAAAACAGTC 57.876 37.500 0.00 0.00 0.00 3.51
555 556 6.324819 CAACAAGAACATCACAGAAAACAGT 58.675 36.000 0.00 0.00 0.00 3.55
556 557 5.230726 GCAACAAGAACATCACAGAAAACAG 59.769 40.000 0.00 0.00 0.00 3.16
557 558 5.101628 GCAACAAGAACATCACAGAAAACA 58.898 37.500 0.00 0.00 0.00 2.83
558 559 4.204978 CGCAACAAGAACATCACAGAAAAC 59.795 41.667 0.00 0.00 0.00 2.43
559 560 4.095632 TCGCAACAAGAACATCACAGAAAA 59.904 37.500 0.00 0.00 0.00 2.29
560 561 3.625313 TCGCAACAAGAACATCACAGAAA 59.375 39.130 0.00 0.00 0.00 2.52
561 562 3.202097 TCGCAACAAGAACATCACAGAA 58.798 40.909 0.00 0.00 0.00 3.02
562 563 2.832563 TCGCAACAAGAACATCACAGA 58.167 42.857 0.00 0.00 0.00 3.41
563 564 3.818961 ATCGCAACAAGAACATCACAG 57.181 42.857 0.00 0.00 0.00 3.66
564 565 5.878332 ATAATCGCAACAAGAACATCACA 57.122 34.783 0.00 0.00 0.00 3.58
565 566 7.910162 ACATAATAATCGCAACAAGAACATCAC 59.090 33.333 0.00 0.00 0.00 3.06
566 567 7.909641 CACATAATAATCGCAACAAGAACATCA 59.090 33.333 0.00 0.00 0.00 3.07
567 568 8.122330 TCACATAATAATCGCAACAAGAACATC 58.878 33.333 0.00 0.00 0.00 3.06
568 569 7.910162 GTCACATAATAATCGCAACAAGAACAT 59.090 33.333 0.00 0.00 0.00 2.71
569 570 7.119116 AGTCACATAATAATCGCAACAAGAACA 59.881 33.333 0.00 0.00 0.00 3.18
570 571 7.426456 CAGTCACATAATAATCGCAACAAGAAC 59.574 37.037 0.00 0.00 0.00 3.01
571 572 7.119116 ACAGTCACATAATAATCGCAACAAGAA 59.881 33.333 0.00 0.00 0.00 2.52
572 573 6.593770 ACAGTCACATAATAATCGCAACAAGA 59.406 34.615 0.00 0.00 0.00 3.02
573 574 6.775088 ACAGTCACATAATAATCGCAACAAG 58.225 36.000 0.00 0.00 0.00 3.16
574 575 6.735678 ACAGTCACATAATAATCGCAACAA 57.264 33.333 0.00 0.00 0.00 2.83
575 576 6.735678 AACAGTCACATAATAATCGCAACA 57.264 33.333 0.00 0.00 0.00 3.33
576 577 7.962918 AGAAAACAGTCACATAATAATCGCAAC 59.037 33.333 0.00 0.00 0.00 4.17
577 578 7.962373 CAGAAAACAGTCACATAATAATCGCAA 59.038 33.333 0.00 0.00 0.00 4.85
578 579 7.119116 ACAGAAAACAGTCACATAATAATCGCA 59.881 33.333 0.00 0.00 0.00 5.10
579 580 7.426456 CACAGAAAACAGTCACATAATAATCGC 59.574 37.037 0.00 0.00 0.00 4.58
580 581 7.426456 GCACAGAAAACAGTCACATAATAATCG 59.574 37.037 0.00 0.00 0.00 3.34
581 582 8.454106 AGCACAGAAAACAGTCACATAATAATC 58.546 33.333 0.00 0.00 0.00 1.75
582 583 8.239314 CAGCACAGAAAACAGTCACATAATAAT 58.761 33.333 0.00 0.00 0.00 1.28
583 584 7.228507 ACAGCACAGAAAACAGTCACATAATAA 59.771 33.333 0.00 0.00 0.00 1.40
584 585 6.710295 ACAGCACAGAAAACAGTCACATAATA 59.290 34.615 0.00 0.00 0.00 0.98
585 586 5.532406 ACAGCACAGAAAACAGTCACATAAT 59.468 36.000 0.00 0.00 0.00 1.28
586 587 4.881273 ACAGCACAGAAAACAGTCACATAA 59.119 37.500 0.00 0.00 0.00 1.90
587 588 4.450976 ACAGCACAGAAAACAGTCACATA 58.549 39.130 0.00 0.00 0.00 2.29
588 589 3.282021 ACAGCACAGAAAACAGTCACAT 58.718 40.909 0.00 0.00 0.00 3.21
589 590 2.710377 ACAGCACAGAAAACAGTCACA 58.290 42.857 0.00 0.00 0.00 3.58
590 591 3.764885 AACAGCACAGAAAACAGTCAC 57.235 42.857 0.00 0.00 0.00 3.67
591 592 5.368145 AGATAACAGCACAGAAAACAGTCA 58.632 37.500 0.00 0.00 0.00 3.41
592 593 5.931441 AGATAACAGCACAGAAAACAGTC 57.069 39.130 0.00 0.00 0.00 3.51
593 594 5.050091 CGAAGATAACAGCACAGAAAACAGT 60.050 40.000 0.00 0.00 0.00 3.55
594 595 5.177511 TCGAAGATAACAGCACAGAAAACAG 59.822 40.000 0.00 0.00 0.00 3.16
595 596 5.053811 TCGAAGATAACAGCACAGAAAACA 58.946 37.500 0.00 0.00 0.00 2.83
596 597 5.177696 ACTCGAAGATAACAGCACAGAAAAC 59.822 40.000 0.00 0.00 33.89 2.43
597 598 5.177511 CACTCGAAGATAACAGCACAGAAAA 59.822 40.000 0.00 0.00 33.89 2.29
598 599 4.686091 CACTCGAAGATAACAGCACAGAAA 59.314 41.667 0.00 0.00 33.89 2.52
599 600 4.022329 TCACTCGAAGATAACAGCACAGAA 60.022 41.667 0.00 0.00 33.89 3.02
600 601 3.506067 TCACTCGAAGATAACAGCACAGA 59.494 43.478 0.00 0.00 33.89 3.41
601 602 3.838120 TCACTCGAAGATAACAGCACAG 58.162 45.455 0.00 0.00 33.89 3.66
602 603 3.934457 TCACTCGAAGATAACAGCACA 57.066 42.857 0.00 0.00 33.89 4.57
603 604 5.554636 CAATTCACTCGAAGATAACAGCAC 58.445 41.667 0.00 0.00 33.74 4.40
604 605 4.093408 GCAATTCACTCGAAGATAACAGCA 59.907 41.667 0.00 0.00 33.74 4.41
605 606 4.093408 TGCAATTCACTCGAAGATAACAGC 59.907 41.667 0.00 0.00 33.74 4.40
606 607 5.784750 TGCAATTCACTCGAAGATAACAG 57.215 39.130 0.00 0.00 33.74 3.16
607 608 6.552859 TTTGCAATTCACTCGAAGATAACA 57.447 33.333 0.00 0.00 33.74 2.41
608 609 7.851822 TTTTTGCAATTCACTCGAAGATAAC 57.148 32.000 0.00 0.00 33.74 1.89
685 686 3.864540 GCCTGGGAATTAGTGTTTTTGGC 60.865 47.826 0.00 0.00 0.00 4.52
878 902 1.536284 GCCTGTAACGATTCGAGGGAG 60.536 57.143 13.95 3.37 0.00 4.30
1099 1140 6.058553 ACACTAACCCTATTTCTACCAACC 57.941 41.667 0.00 0.00 0.00 3.77
1120 1167 4.238669 AGGAAAATCCCCAAATCCAAACA 58.761 39.130 0.00 0.00 37.19 2.83
1594 1735 2.643551 ACAAACCTCACTTGTCCACAG 58.356 47.619 0.00 0.00 31.29 3.66
1616 1757 0.821517 CCCATGCACATGCTTGACAT 59.178 50.000 18.46 6.80 45.61 3.06
1617 1758 0.540133 ACCCATGCACATGCTTGACA 60.540 50.000 18.46 4.72 45.61 3.58
1618 1759 0.604578 AACCCATGCACATGCTTGAC 59.395 50.000 18.46 0.00 45.61 3.18
1619 1760 1.001068 CAAACCCATGCACATGCTTGA 59.999 47.619 18.46 0.00 45.61 3.02
1620 1761 1.434555 CAAACCCATGCACATGCTTG 58.565 50.000 11.71 11.71 43.34 4.01
1621 1762 0.322322 CCAAACCCATGCACATGCTT 59.678 50.000 5.31 0.00 42.66 3.91
1870 2160 3.998913 TGGACAGTGCATTCTCCATTA 57.001 42.857 1.93 0.00 0.00 1.90
2596 3241 2.029964 GGTGCCCAGACGTCGAAA 59.970 61.111 10.46 0.00 0.00 3.46
2597 3242 3.998672 GGGTGCCCAGACGTCGAA 61.999 66.667 10.46 0.00 35.81 3.71
2606 3251 0.482446 AAATGAGTCTTGGGTGCCCA 59.518 50.000 5.73 5.73 45.63 5.36
2607 3252 2.369394 CTAAATGAGTCTTGGGTGCCC 58.631 52.381 0.00 0.00 0.00 5.36
2608 3253 2.290960 ACCTAAATGAGTCTTGGGTGCC 60.291 50.000 0.05 0.00 36.39 5.01
2609 3254 2.749621 CACCTAAATGAGTCTTGGGTGC 59.250 50.000 12.70 0.00 45.00 5.01
2611 3256 2.986728 ACCACCTAAATGAGTCTTGGGT 59.013 45.455 0.00 0.00 38.09 4.51
2612 3257 3.721087 ACCACCTAAATGAGTCTTGGG 57.279 47.619 0.00 0.00 0.00 4.12
2613 3258 4.398319 ACAACCACCTAAATGAGTCTTGG 58.602 43.478 0.00 0.00 0.00 3.61
2614 3259 6.391227 AAACAACCACCTAAATGAGTCTTG 57.609 37.500 0.00 0.00 0.00 3.02
2615 3260 5.238650 CGAAACAACCACCTAAATGAGTCTT 59.761 40.000 0.00 0.00 0.00 3.01
2616 3261 4.755123 CGAAACAACCACCTAAATGAGTCT 59.245 41.667 0.00 0.00 0.00 3.24
2617 3262 4.753107 TCGAAACAACCACCTAAATGAGTC 59.247 41.667 0.00 0.00 0.00 3.36
2618 3263 4.514066 GTCGAAACAACCACCTAAATGAGT 59.486 41.667 0.00 0.00 0.00 3.41
2619 3264 4.377022 CGTCGAAACAACCACCTAAATGAG 60.377 45.833 0.00 0.00 0.00 2.90
2620 3265 3.495377 CGTCGAAACAACCACCTAAATGA 59.505 43.478 0.00 0.00 0.00 2.57
2621 3266 3.249080 ACGTCGAAACAACCACCTAAATG 59.751 43.478 0.00 0.00 0.00 2.32
2622 3267 3.469739 ACGTCGAAACAACCACCTAAAT 58.530 40.909 0.00 0.00 0.00 1.40
2623 3268 2.865551 GACGTCGAAACAACCACCTAAA 59.134 45.455 0.00 0.00 0.00 1.85
2624 3269 2.472816 GACGTCGAAACAACCACCTAA 58.527 47.619 0.00 0.00 0.00 2.69
2625 3270 1.600164 CGACGTCGAAACAACCACCTA 60.600 52.381 33.35 0.00 43.02 3.08
2626 3271 0.872881 CGACGTCGAAACAACCACCT 60.873 55.000 33.35 0.00 43.02 4.00
2627 3272 0.871163 TCGACGTCGAAACAACCACC 60.871 55.000 36.25 0.00 46.30 4.61
2628 3273 2.580661 TCGACGTCGAAACAACCAC 58.419 52.632 36.25 0.00 46.30 4.16
2677 3322 3.544167 CTAGGGCGCCTCGACATCG 62.544 68.421 28.56 2.54 36.10 3.84
2678 3323 2.194212 TCTAGGGCGCCTCGACATC 61.194 63.158 28.56 7.55 36.10 3.06
2679 3324 2.123854 TCTAGGGCGCCTCGACAT 60.124 61.111 28.56 8.16 36.10 3.06
2680 3325 3.138798 GTCTAGGGCGCCTCGACA 61.139 66.667 28.56 3.74 43.22 4.35
2681 3326 2.829458 AGTCTAGGGCGCCTCGAC 60.829 66.667 28.56 26.52 43.81 4.20
2682 3327 2.516460 GAGTCTAGGGCGCCTCGA 60.516 66.667 28.56 17.11 34.61 4.04
2683 3328 1.739338 AATGAGTCTAGGGCGCCTCG 61.739 60.000 28.56 14.91 34.61 4.63
2684 3329 0.466124 AAATGAGTCTAGGGCGCCTC 59.534 55.000 28.56 16.85 34.61 4.70
2685 3330 1.689273 CTAAATGAGTCTAGGGCGCCT 59.311 52.381 28.56 15.07 37.71 5.52
2686 3331 1.270358 CCTAAATGAGTCTAGGGCGCC 60.270 57.143 21.18 21.18 32.46 6.53
2687 3332 1.413077 ACCTAAATGAGTCTAGGGCGC 59.587 52.381 0.00 0.00 39.29 6.53
2688 3333 2.224066 CCACCTAAATGAGTCTAGGGCG 60.224 54.545 8.40 0.70 39.29 6.13
2689 3334 2.772515 ACCACCTAAATGAGTCTAGGGC 59.227 50.000 8.40 0.00 39.29 5.19
2690 3335 5.437191 AAACCACCTAAATGAGTCTAGGG 57.563 43.478 8.40 0.00 39.29 3.53
2691 3336 7.438459 CGAATAAACCACCTAAATGAGTCTAGG 59.562 40.741 3.02 3.02 40.58 3.02
2692 3337 8.195436 TCGAATAAACCACCTAAATGAGTCTAG 58.805 37.037 0.00 0.00 0.00 2.43
2693 3338 7.977853 GTCGAATAAACCACCTAAATGAGTCTA 59.022 37.037 0.00 0.00 0.00 2.59
2694 3339 6.817140 GTCGAATAAACCACCTAAATGAGTCT 59.183 38.462 0.00 0.00 0.00 3.24
2695 3340 6.237755 CGTCGAATAAACCACCTAAATGAGTC 60.238 42.308 0.00 0.00 0.00 3.36
2696 3341 5.579511 CGTCGAATAAACCACCTAAATGAGT 59.420 40.000 0.00 0.00 0.00 3.41
2697 3342 5.579511 ACGTCGAATAAACCACCTAAATGAG 59.420 40.000 0.00 0.00 0.00 2.90
2698 3343 5.481105 ACGTCGAATAAACCACCTAAATGA 58.519 37.500 0.00 0.00 0.00 2.57
2699 3344 5.579511 AGACGTCGAATAAACCACCTAAATG 59.420 40.000 10.46 0.00 0.00 2.32
2700 3345 5.579511 CAGACGTCGAATAAACCACCTAAAT 59.420 40.000 10.46 0.00 0.00 1.40
2701 3346 4.925054 CAGACGTCGAATAAACCACCTAAA 59.075 41.667 10.46 0.00 0.00 1.85
2702 3347 4.487948 CAGACGTCGAATAAACCACCTAA 58.512 43.478 10.46 0.00 0.00 2.69
2703 3348 3.119388 CCAGACGTCGAATAAACCACCTA 60.119 47.826 10.46 0.00 0.00 3.08
2704 3349 2.353406 CCAGACGTCGAATAAACCACCT 60.353 50.000 10.46 0.00 0.00 4.00
2705 3350 1.997606 CCAGACGTCGAATAAACCACC 59.002 52.381 10.46 0.00 0.00 4.61
2706 3351 1.997606 CCCAGACGTCGAATAAACCAC 59.002 52.381 10.46 0.00 0.00 4.16
2707 3352 1.673626 GCCCAGACGTCGAATAAACCA 60.674 52.381 10.46 0.00 0.00 3.67
2708 3353 1.004595 GCCCAGACGTCGAATAAACC 58.995 55.000 10.46 0.00 0.00 3.27
2709 3354 1.392510 GTGCCCAGACGTCGAATAAAC 59.607 52.381 10.46 2.39 0.00 2.01
2710 3355 1.673626 GGTGCCCAGACGTCGAATAAA 60.674 52.381 10.46 0.00 0.00 1.40
2711 3356 0.108520 GGTGCCCAGACGTCGAATAA 60.109 55.000 10.46 0.00 0.00 1.40
2712 3357 1.514087 GGTGCCCAGACGTCGAATA 59.486 57.895 10.46 0.00 0.00 1.75
2713 3358 2.264794 GGTGCCCAGACGTCGAAT 59.735 61.111 10.46 0.00 0.00 3.34
2714 3359 3.998672 GGGTGCCCAGACGTCGAA 61.999 66.667 10.46 0.00 35.81 3.71
2715 3360 3.572447 TAGGGTGCCCAGACGTCGA 62.572 63.158 10.46 0.00 38.92 4.20
2716 3361 3.064987 CTAGGGTGCCCAGACGTCG 62.065 68.421 10.46 5.16 38.92 5.12
2717 3362 1.681327 TCTAGGGTGCCCAGACGTC 60.681 63.158 7.70 7.70 38.92 4.34
2718 3363 1.982938 GTCTAGGGTGCCCAGACGT 60.983 63.158 17.58 0.00 35.89 4.34
2719 3364 1.668101 GAGTCTAGGGTGCCCAGACG 61.668 65.000 22.23 6.53 42.98 4.18
2720 3365 0.614979 TGAGTCTAGGGTGCCCAGAC 60.615 60.000 21.58 21.58 40.85 3.51
2721 3366 0.339859 ATGAGTCTAGGGTGCCCAGA 59.660 55.000 10.26 7.54 38.92 3.86
2722 3367 1.207791 AATGAGTCTAGGGTGCCCAG 58.792 55.000 10.26 5.35 38.92 4.45
2723 3368 1.668826 AAATGAGTCTAGGGTGCCCA 58.331 50.000 10.26 0.00 38.92 5.36
2724 3369 2.104963 CCTAAATGAGTCTAGGGTGCCC 59.895 54.545 0.00 0.00 32.46 5.36
2725 3370 2.772515 ACCTAAATGAGTCTAGGGTGCC 59.227 50.000 8.40 0.00 39.29 5.01
2726 3371 3.432326 CCACCTAAATGAGTCTAGGGTGC 60.432 52.174 8.40 0.00 40.69 5.01
2727 3372 3.775316 ACCACCTAAATGAGTCTAGGGTG 59.225 47.826 8.40 10.12 39.29 4.61
2728 3373 4.076175 ACCACCTAAATGAGTCTAGGGT 57.924 45.455 8.40 0.00 39.29 4.34
2729 3374 5.437191 AAACCACCTAAATGAGTCTAGGG 57.563 43.478 8.40 0.00 39.29 3.53
3054 3699 1.637402 GTGCCACGACGTCGAAAAA 59.363 52.632 41.52 21.93 43.02 1.94
3055 3700 2.239124 GGTGCCACGACGTCGAAAA 61.239 57.895 41.52 21.58 43.02 2.29
3056 3701 2.659244 GGTGCCACGACGTCGAAA 60.659 61.111 41.52 21.24 43.02 3.46
3057 3702 4.651008 GGGTGCCACGACGTCGAA 62.651 66.667 41.52 21.59 43.02 3.71
3059 3704 3.678717 CTAGGGTGCCACGACGTCG 62.679 68.421 34.58 34.58 46.33 5.12
3060 3705 2.181021 CTAGGGTGCCACGACGTC 59.819 66.667 5.18 5.18 0.00 4.34
3061 3706 2.282674 TCTAGGGTGCCACGACGT 60.283 61.111 0.00 0.00 0.00 4.34
3062 3707 1.874345 AAGTCTAGGGTGCCACGACG 61.874 60.000 0.00 0.00 32.74 5.12
3063 3708 1.180029 TAAGTCTAGGGTGCCACGAC 58.820 55.000 0.00 0.00 0.00 4.34
3064 3709 2.154567 ATAAGTCTAGGGTGCCACGA 57.845 50.000 0.00 0.00 0.00 4.35
3065 3710 2.981859 AATAAGTCTAGGGTGCCACG 57.018 50.000 0.00 0.00 0.00 4.94
3066 3711 4.163649 ACCTAAATAAGTCTAGGGTGCCAC 59.836 45.833 0.54 0.00 39.29 5.01
3067 3712 4.163458 CACCTAAATAAGTCTAGGGTGCCA 59.837 45.833 0.00 0.00 39.29 4.92
3068 3713 4.444449 CCACCTAAATAAGTCTAGGGTGCC 60.444 50.000 0.00 0.00 40.69 5.01
3069 3714 4.163649 ACCACCTAAATAAGTCTAGGGTGC 59.836 45.833 0.00 0.00 40.69 5.01
3070 3715 5.952347 ACCACCTAAATAAGTCTAGGGTG 57.048 43.478 0.00 0.00 39.29 4.61
3071 3716 5.789054 ACAACCACCTAAATAAGTCTAGGGT 59.211 40.000 0.54 0.00 39.29 4.34
3072 3717 6.309389 ACAACCACCTAAATAAGTCTAGGG 57.691 41.667 0.54 0.00 39.29 3.53
3073 3718 7.064253 CGAAACAACCACCTAAATAAGTCTAGG 59.936 40.741 0.00 0.00 40.58 3.02
3074 3719 7.816031 TCGAAACAACCACCTAAATAAGTCTAG 59.184 37.037 0.00 0.00 0.00 2.43
3075 3720 7.599998 GTCGAAACAACCACCTAAATAAGTCTA 59.400 37.037 0.00 0.00 0.00 2.59
3076 3721 6.426025 GTCGAAACAACCACCTAAATAAGTCT 59.574 38.462 0.00 0.00 0.00 3.24
3077 3722 6.596703 GTCGAAACAACCACCTAAATAAGTC 58.403 40.000 0.00 0.00 0.00 3.01
3078 3723 5.178067 CGTCGAAACAACCACCTAAATAAGT 59.822 40.000 0.00 0.00 0.00 2.24
3079 3724 5.178067 ACGTCGAAACAACCACCTAAATAAG 59.822 40.000 0.00 0.00 0.00 1.73
3080 3725 5.055812 ACGTCGAAACAACCACCTAAATAA 58.944 37.500 0.00 0.00 0.00 1.40
3081 3726 4.630111 ACGTCGAAACAACCACCTAAATA 58.370 39.130 0.00 0.00 0.00 1.40
3082 3727 3.469739 ACGTCGAAACAACCACCTAAAT 58.530 40.909 0.00 0.00 0.00 1.40
3083 3728 2.865551 GACGTCGAAACAACCACCTAAA 59.134 45.455 0.00 0.00 0.00 1.85
3084 3729 2.472816 GACGTCGAAACAACCACCTAA 58.527 47.619 0.00 0.00 0.00 2.69
3085 3730 1.600164 CGACGTCGAAACAACCACCTA 60.600 52.381 33.35 0.00 43.02 3.08
3086 3731 0.872881 CGACGTCGAAACAACCACCT 60.873 55.000 33.35 0.00 43.02 4.00
3087 3732 0.871163 TCGACGTCGAAACAACCACC 60.871 55.000 36.25 0.00 46.30 4.61
3088 3733 2.580661 TCGACGTCGAAACAACCAC 58.419 52.632 36.25 0.00 46.30 4.16
3173 4731 2.264794 GGTGCCCAGACGTCGAAT 59.735 61.111 10.46 0.00 0.00 3.34
3183 4818 1.668826 AAATGAGTCTAGGGTGCCCA 58.331 50.000 10.26 0.00 38.92 5.36
3184 4819 2.104963 CCTAAATGAGTCTAGGGTGCCC 59.895 54.545 0.00 0.00 32.46 5.36
3212 4847 1.303317 GGGTGCCCAGACGTTGAAT 60.303 57.895 1.66 0.00 35.81 2.57
3222 4857 0.482446 AAATGAGTCTTGGGTGCCCA 59.518 50.000 5.73 5.73 45.63 5.36
3223 4858 2.369394 CTAAATGAGTCTTGGGTGCCC 58.631 52.381 0.00 0.00 0.00 5.36
3231 4866 7.939039 TGAACTTGAATCACCTAAATGAGTCTT 59.061 33.333 5.02 0.00 42.73 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.