Multiple sequence alignment - TraesCS6D01G350200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G350200 chr6D 100.000 5314 0 0 1 5314 447845703 447851016 0.000000e+00 9814.0
1 TraesCS6D01G350200 chr6A 91.319 3168 172 52 1622 4747 594440565 594443671 0.000000e+00 4231.0
2 TraesCS6D01G350200 chr6A 89.358 1231 57 25 327 1531 594439390 594440572 0.000000e+00 1480.0
3 TraesCS6D01G350200 chr6A 87.988 333 32 4 1 328 594435934 594436263 2.320000e-103 387.0
4 TraesCS6D01G350200 chr6A 87.204 211 11 2 4758 4967 594443709 594443904 5.350000e-55 226.0
5 TraesCS6D01G350200 chr6B 91.480 2817 150 45 1622 4389 678681375 678684150 0.000000e+00 3790.0
6 TraesCS6D01G350200 chr6B 89.301 916 42 21 669 1531 678680470 678681382 0.000000e+00 1098.0
7 TraesCS6D01G350200 chr6B 87.755 147 7 9 4454 4590 678684150 678684295 1.530000e-35 161.0
8 TraesCS6D01G350200 chr5A 87.927 936 70 20 1230 2133 644381352 644382276 0.000000e+00 1062.0
9 TraesCS6D01G350200 chr5A 81.741 471 56 20 3249 3693 659891215 659891681 3.020000e-97 366.0
10 TraesCS6D01G350200 chr5A 94.152 171 8 2 946 1114 644380828 644380998 5.280000e-65 259.0
11 TraesCS6D01G350200 chr5A 86.224 196 16 7 4005 4196 659892243 659892431 9.020000e-48 202.0
12 TraesCS6D01G350200 chr5A 93.043 115 6 2 1081 1194 659888931 659889044 3.290000e-37 167.0
13 TraesCS6D01G350200 chr5D 82.126 828 122 18 2310 3117 67929172 67929993 0.000000e+00 686.0
14 TraesCS6D01G350200 chr5D 95.122 41 2 0 555 595 448129641 448129601 1.240000e-06 65.8
15 TraesCS6D01G350200 chr5B 81.862 838 124 16 2305 3117 73990757 73991591 0.000000e+00 680.0
16 TraesCS6D01G350200 chr5B 94.545 55 3 0 536 590 703892183 703892237 9.480000e-13 86.1
17 TraesCS6D01G350200 chrUn 81.107 831 123 17 2310 3117 221267091 221267910 7.510000e-178 634.0
18 TraesCS6D01G350200 chr4A 87.345 403 27 3 999 1382 29795274 29794877 1.760000e-119 440.0
19 TraesCS6D01G350200 chr4B 80.450 578 59 34 3153 3696 612251791 612251234 4.990000e-105 392.0
20 TraesCS6D01G350200 chr4B 82.653 294 29 16 4020 4303 612250707 612250426 1.910000e-59 241.0
21 TraesCS6D01G350200 chr4D 89.606 279 23 4 4200 4478 143562484 143562756 3.050000e-92 350.0
22 TraesCS6D01G350200 chr4D 78.428 598 68 35 3266 3812 482516803 482516216 3.070000e-87 333.0
23 TraesCS6D01G350200 chr4D 81.759 307 29 16 4005 4307 482515915 482515632 1.150000e-56 231.0
24 TraesCS6D01G350200 chr4D 79.638 221 20 15 4629 4838 143562823 143563029 9.280000e-28 135.0
25 TraesCS6D01G350200 chr7A 89.272 261 20 6 4221 4478 728236429 728236174 2.390000e-83 320.0
26 TraesCS6D01G350200 chr7A 92.424 66 5 0 534 599 719819902 719819837 1.580000e-15 95.3
27 TraesCS6D01G350200 chr2D 79.302 401 43 19 1664 2049 264807302 264807677 1.480000e-60 244.0
28 TraesCS6D01G350200 chr2D 90.698 43 4 0 747 789 624563206 624563248 2.070000e-04 58.4
29 TraesCS6D01G350200 chr2B 79.302 401 43 19 1664 2049 330444592 330444217 1.480000e-60 244.0
30 TraesCS6D01G350200 chr2B 97.297 37 1 0 5277 5313 654364087 654364123 4.440000e-06 63.9
31 TraesCS6D01G350200 chr7D 87.619 210 20 6 4269 4478 225676672 225676469 6.880000e-59 239.0
32 TraesCS6D01G350200 chr7D 91.200 125 8 3 4200 4322 637570436 637570313 3.290000e-37 167.0
33 TraesCS6D01G350200 chr7D 97.468 79 2 0 4201 4279 225826141 225826063 9.280000e-28 135.0
34 TraesCS6D01G350200 chr7D 78.947 228 22 14 4631 4847 225676426 225676214 1.200000e-26 132.0
35 TraesCS6D01G350200 chr7D 88.889 90 6 2 4758 4847 637570081 637569996 2.020000e-19 108.0
36 TraesCS6D01G350200 chr7D 94.737 57 3 0 539 595 535551711 535551655 7.330000e-14 89.8
37 TraesCS6D01G350200 chr3B 79.402 301 38 15 1110 1402 753852262 753852546 1.950000e-44 191.0
38 TraesCS6D01G350200 chr3B 80.000 95 16 3 747 839 571810933 571811026 3.430000e-07 67.6
39 TraesCS6D01G350200 chr1B 100.000 28 0 0 717 744 364291734 364291707 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G350200 chr6D 447845703 447851016 5313 False 9814.0 9814 100.000000 1 5314 1 chr6D.!!$F1 5313
1 TraesCS6D01G350200 chr6A 594435934 594443904 7970 False 1581.0 4231 88.967250 1 4967 4 chr6A.!!$F1 4966
2 TraesCS6D01G350200 chr6B 678680470 678684295 3825 False 1683.0 3790 89.512000 669 4590 3 chr6B.!!$F1 3921
3 TraesCS6D01G350200 chr5A 644380828 644382276 1448 False 660.5 1062 91.039500 946 2133 2 chr5A.!!$F1 1187
4 TraesCS6D01G350200 chr5A 659888931 659892431 3500 False 245.0 366 87.002667 1081 4196 3 chr5A.!!$F2 3115
5 TraesCS6D01G350200 chr5D 67929172 67929993 821 False 686.0 686 82.126000 2310 3117 1 chr5D.!!$F1 807
6 TraesCS6D01G350200 chr5B 73990757 73991591 834 False 680.0 680 81.862000 2305 3117 1 chr5B.!!$F1 812
7 TraesCS6D01G350200 chrUn 221267091 221267910 819 False 634.0 634 81.107000 2310 3117 1 chrUn.!!$F1 807
8 TraesCS6D01G350200 chr4B 612250426 612251791 1365 True 316.5 392 81.551500 3153 4303 2 chr4B.!!$R1 1150
9 TraesCS6D01G350200 chr4D 482515632 482516803 1171 True 282.0 333 80.093500 3266 4307 2 chr4D.!!$R1 1041
10 TraesCS6D01G350200 chr4D 143562484 143563029 545 False 242.5 350 84.622000 4200 4838 2 chr4D.!!$F1 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
812 3966 0.032403 GCATGGCAACTTTGTGCTCA 59.968 50.0 0.00 0.00 44.31 4.26 F
1578 5108 0.036306 CTGGGCTGGTCCTAAACGTT 59.964 55.0 0.00 0.00 34.39 3.99 F
1579 5109 0.250553 TGGGCTGGTCCTAAACGTTG 60.251 55.0 0.00 0.00 34.39 4.10 F
3253 8147 1.230635 TTTGACTTCGCTGCTGCCTC 61.231 55.0 10.24 0.72 35.36 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1820 5380 0.625316 TGGCATGCATTCCAGGTACT 59.375 50.000 21.36 0.0 43.88 2.73 R
3495 8391 0.036765 TAACAGCTGCCTAACACCGG 60.037 55.000 15.27 0.0 0.00 5.28 R
3499 8395 2.091541 GCCAATAACAGCTGCCTAACA 58.908 47.619 15.27 0.0 0.00 2.41 R
5015 10448 0.037046 CATTTGCCCAAGCTTCCCAC 60.037 55.000 0.00 0.0 40.80 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.780186 CTTATCTAGTAAAGGAATTTACTGGGG 57.220 37.037 18.87 11.27 44.70 4.96
59 60 3.565905 AGCAAGTACGTACACCTACAC 57.434 47.619 26.55 9.16 0.00 2.90
66 67 1.806542 ACGTACACCTACACTACACCG 59.193 52.381 0.00 0.00 0.00 4.94
121 122 6.778069 TCCCAGTTATGAGAACCTATAGTCAG 59.222 42.308 0.00 0.00 0.00 3.51
122 123 6.015010 CCCAGTTATGAGAACCTATAGTCAGG 60.015 46.154 0.00 0.00 41.87 3.86
143 144 3.633986 GGCAGAAGGAATGATTTAGGGTG 59.366 47.826 0.00 0.00 0.00 4.61
145 146 4.578105 GCAGAAGGAATGATTTAGGGTGAG 59.422 45.833 0.00 0.00 0.00 3.51
160 161 5.700402 AGGGTGAGTAAGCATACAGATTT 57.300 39.130 1.44 0.00 34.29 2.17
161 162 5.675538 AGGGTGAGTAAGCATACAGATTTC 58.324 41.667 1.44 0.00 34.29 2.17
173 178 8.058667 AGCATACAGATTTCAATGAACATCAA 57.941 30.769 15.28 0.00 0.00 2.57
174 179 8.525316 AGCATACAGATTTCAATGAACATCAAA 58.475 29.630 15.28 0.00 0.00 2.69
175 180 9.309516 GCATACAGATTTCAATGAACATCAAAT 57.690 29.630 15.28 0.00 0.00 2.32
244 249 2.354805 GCCTTCCACGTAATTCAGGACT 60.355 50.000 0.00 0.00 0.00 3.85
287 292 8.298729 AGATGACAAGAAATAAAAGGGATTCC 57.701 34.615 0.00 0.00 0.00 3.01
483 3616 8.823220 ATTAGTATTTGCACTAATGGAGGTTT 57.177 30.769 7.52 0.00 45.60 3.27
488 3621 3.826524 TGCACTAATGGAGGTTTTGTCA 58.173 40.909 0.00 0.00 0.00 3.58
493 3626 4.583073 ACTAATGGAGGTTTTGTCAACACC 59.417 41.667 12.25 12.25 0.00 4.16
494 3627 2.516227 TGGAGGTTTTGTCAACACCA 57.484 45.000 20.42 5.41 32.43 4.17
495 3628 2.096248 TGGAGGTTTTGTCAACACCAC 58.904 47.619 20.42 14.83 32.43 4.16
496 3629 2.291282 TGGAGGTTTTGTCAACACCACT 60.291 45.455 20.42 3.38 32.43 4.00
499 3632 4.173256 GAGGTTTTGTCAACACCACTTTG 58.827 43.478 20.42 0.00 32.43 2.77
503 3636 5.175127 GTTTTGTCAACACCACTTTGGAAT 58.825 37.500 0.00 0.00 40.96 3.01
521 3656 6.739331 TGGAATTGGGTTAGACAAATGTTT 57.261 33.333 0.00 0.00 0.00 2.83
608 3743 3.381590 ACCAGAGTTTGAACAAAGAAGGC 59.618 43.478 0.00 0.00 0.00 4.35
612 3747 2.039418 GTTTGAACAAAGAAGGCCCCT 58.961 47.619 0.00 0.00 0.00 4.79
627 3770 2.310233 CCCTCGCTGTGTGTTGTCG 61.310 63.158 0.00 0.00 0.00 4.35
652 3795 2.038975 TCTCCCCTTGGGTCGAGG 59.961 66.667 4.84 0.00 44.74 4.63
657 3800 0.178973 CCCCTTGGGTCGAGGTTTTT 60.179 55.000 4.84 0.00 38.25 1.94
691 3834 5.621197 TGTAAATGTAGTGTCAATGGCAC 57.379 39.130 10.39 10.39 37.13 5.01
707 3850 2.569404 TGGCACATAAATTTTGGACCCC 59.431 45.455 0.00 0.00 0.00 4.95
711 3854 4.339814 GCACATAAATTTTGGACCCCGATA 59.660 41.667 0.00 0.00 0.00 2.92
744 3887 1.074727 TGTTCGGGATTTGACCATGGT 59.925 47.619 19.89 19.89 0.00 3.55
779 3933 0.179127 CAGTGACGCGAGGATGACAT 60.179 55.000 15.93 0.00 0.00 3.06
790 3944 3.063997 CGAGGATGACATGTTTAGTTGGC 59.936 47.826 0.00 0.00 0.00 4.52
812 3966 0.032403 GCATGGCAACTTTGTGCTCA 59.968 50.000 0.00 0.00 44.31 4.26
813 3967 1.538634 GCATGGCAACTTTGTGCTCAA 60.539 47.619 0.00 0.00 44.31 3.02
865 4043 6.851330 CGTTTGACTAAAGAAACCAAGATGTC 59.149 38.462 0.00 0.00 0.00 3.06
866 4044 7.254795 CGTTTGACTAAAGAAACCAAGATGTCT 60.255 37.037 0.00 0.00 0.00 3.41
1017 4204 0.884704 CACGACCCCAAGACAACAGG 60.885 60.000 0.00 0.00 0.00 4.00
1228 4424 3.221389 CGATCCGCCCCCGTTCTA 61.221 66.667 0.00 0.00 0.00 2.10
1455 4932 1.401905 CAATCCCGCTCTAGGTTTTGC 59.598 52.381 0.00 0.00 0.00 3.68
1544 5074 1.267806 CAGTTTGACCACACCAGATGC 59.732 52.381 0.00 0.00 0.00 3.91
1557 5087 4.273480 ACACCAGATGCGTTAATATCTTGC 59.727 41.667 0.00 0.00 31.53 4.01
1562 5092 4.512944 AGATGCGTTAATATCTTGCACTGG 59.487 41.667 0.00 0.00 38.54 4.00
1563 5093 2.942376 TGCGTTAATATCTTGCACTGGG 59.058 45.455 0.00 0.00 0.00 4.45
1569 5099 0.253044 TATCTTGCACTGGGCTGGTC 59.747 55.000 2.50 0.00 45.15 4.02
1577 5107 1.125711 ACTGGGCTGGTCCTAAACGT 61.126 55.000 0.00 0.00 34.39 3.99
1578 5108 0.036306 CTGGGCTGGTCCTAAACGTT 59.964 55.000 0.00 0.00 34.39 3.99
1579 5109 0.250553 TGGGCTGGTCCTAAACGTTG 60.251 55.000 0.00 0.00 34.39 4.10
1587 5136 4.454717 CTAAACGTTGCGCGCCCC 62.455 66.667 30.77 17.93 46.11 5.80
1610 5159 1.751351 TCACTGTCCGTCAGATGGATC 59.249 52.381 14.86 9.05 46.27 3.36
1614 5163 1.548719 TGTCCGTCAGATGGATCGTTT 59.451 47.619 14.86 0.00 35.40 3.60
1623 5172 6.487103 GTCAGATGGATCGTTTGTTTTATCC 58.513 40.000 0.00 0.00 38.71 2.59
1686 5235 6.568653 GCAAGTAGGATTCTCTTTGTCAAACC 60.569 42.308 0.00 0.00 0.00 3.27
1705 5254 7.327761 GTCAAACCATGTCATTTTCTTGATGAG 59.672 37.037 0.00 0.00 34.41 2.90
1709 5261 8.218338 ACCATGTCATTTTCTTGATGAGATAC 57.782 34.615 0.00 0.00 35.91 2.24
1815 5375 3.771216 AGGGGCATATTGCTTTATCAGG 58.229 45.455 0.00 0.00 44.28 3.86
1817 5377 3.256631 GGGGCATATTGCTTTATCAGGTG 59.743 47.826 0.00 0.00 44.28 4.00
1818 5378 3.891366 GGGCATATTGCTTTATCAGGTGT 59.109 43.478 0.00 0.00 44.28 4.16
1819 5379 5.070001 GGGCATATTGCTTTATCAGGTGTA 58.930 41.667 0.00 0.00 44.28 2.90
1820 5380 5.534654 GGGCATATTGCTTTATCAGGTGTAA 59.465 40.000 0.00 0.00 44.28 2.41
1861 5421 7.097834 GCCAATGTAAGTTCTAGTTCTAGTGT 58.902 38.462 6.73 0.00 0.00 3.55
1968 5530 6.148480 GGACAGTGGCATGAAGATTATACATC 59.852 42.308 0.00 0.00 0.00 3.06
1972 5534 8.880750 CAGTGGCATGAAGATTATACATCATAG 58.119 37.037 0.00 0.00 31.59 2.23
1976 5538 9.440773 GGCATGAAGATTATACATCATAGAACA 57.559 33.333 0.00 0.00 31.59 3.18
2112 5675 3.265737 TGGCTAGTAATTCAGGCTTCCAA 59.734 43.478 8.87 0.00 38.14 3.53
2128 5695 2.035632 TCCAACAAAACCCATGGTCAC 58.964 47.619 11.73 0.00 33.12 3.67
2195 5768 8.723942 AACTGAAGTAATGTTAGCCTCAATAG 57.276 34.615 0.00 0.00 0.00 1.73
2227 5800 7.564793 TCTGCATTATTTCCTCTGTTAGCTTA 58.435 34.615 0.00 0.00 0.00 3.09
2487 7340 9.177608 CTTCTATGGATATGAAAGTGGAAACAA 57.822 33.333 0.00 0.00 46.06 2.83
2547 7400 3.639672 TGCATGTTCAGAGGTCATGAT 57.360 42.857 0.00 0.00 40.64 2.45
2571 7424 3.609853 TGCATACATCCTGGTGAACTTC 58.390 45.455 0.00 0.00 0.00 3.01
2587 7440 5.833082 TGAACTTCTCACTCTGTCAAGTAC 58.167 41.667 0.00 0.00 0.00 2.73
2601 7454 4.991687 TGTCAAGTACAATGCGACATAACA 59.008 37.500 0.00 0.00 34.29 2.41
2611 7464 3.855858 TGCGACATAACAGATTACTGCA 58.144 40.909 0.00 0.00 46.95 4.41
2612 7465 4.249661 TGCGACATAACAGATTACTGCAA 58.750 39.130 0.00 0.00 46.95 4.08
2687 7544 9.632638 ATGGTAGAATGAAGTAATACAGCAATT 57.367 29.630 0.00 0.00 0.00 2.32
2733 7604 8.152898 TCTCACAGTATTCATTATCCCATCAAG 58.847 37.037 0.00 0.00 0.00 3.02
2760 7631 4.418392 CAAACTGGCAGAGATGTAATTGC 58.582 43.478 23.66 0.00 35.87 3.56
2795 7666 6.944862 AGGAAATAGAACTTCAACAAGCTCAT 59.055 34.615 0.00 0.00 32.09 2.90
2944 7818 9.768662 AAATGACTGAAAATGCTGTAAGAAAAT 57.231 25.926 0.00 0.00 34.07 1.82
2979 7853 3.644966 TTAATCCCAGTGGCAGTAAGG 57.355 47.619 2.61 0.00 0.00 2.69
3022 7901 7.750229 TGAACTTCATTTGAGAGCATAAACT 57.250 32.000 0.00 0.00 0.00 2.66
3109 8003 4.216472 CCTCTAGAAAAACCTGGACAAAGC 59.784 45.833 0.00 0.00 0.00 3.51
3131 8025 8.956533 AAGCCAATTAAAGCTTTTGTTAAAGA 57.043 26.923 18.47 0.00 46.99 2.52
3163 8057 9.696917 ATCAAGAGTGATTTCCATTTTGTTTAC 57.303 29.630 0.00 0.00 42.03 2.01
3253 8147 1.230635 TTTGACTTCGCTGCTGCCTC 61.231 55.000 10.24 0.72 35.36 4.70
3263 8157 1.796617 GCTGCTGCCTCGCATTAAAAG 60.797 52.381 3.85 0.00 39.52 2.27
3490 8386 6.698008 TGCCAGTTATGACTTATGAATTGG 57.302 37.500 0.00 0.00 32.54 3.16
3495 8391 8.345565 CCAGTTATGACTTATGAATTGGTTAGC 58.654 37.037 0.00 0.00 32.54 3.09
3499 8395 4.196971 GACTTATGAATTGGTTAGCCGGT 58.803 43.478 1.90 0.00 37.67 5.28
3516 8445 2.356135 CGGTGTTAGGCAGCTGTTATT 58.644 47.619 16.64 1.17 42.99 1.40
3528 8457 4.036734 GCAGCTGTTATTGGCATTAGCTTA 59.963 41.667 16.64 0.00 39.29 3.09
3564 8501 7.181143 TGGAACACACTCGAGTAAAATTTAC 57.819 36.000 19.57 7.75 0.00 2.01
3598 8543 1.886542 GGTTTGATCCTGGAACACACC 59.113 52.381 21.68 21.68 30.50 4.16
3874 9158 2.961062 CCTTAGCCAGGCATATGCTTTT 59.039 45.455 26.12 10.43 41.70 2.27
3879 9163 2.101917 GCCAGGCATATGCTTTTCATGT 59.898 45.455 26.12 0.00 41.70 3.21
3890 9176 3.380954 TGCTTTTCATGTCAAAGAGTGCA 59.619 39.130 18.59 10.53 33.69 4.57
3898 9187 1.265365 GTCAAAGAGTGCAAGCCTGTC 59.735 52.381 0.00 0.00 0.00 3.51
3954 9255 6.109359 AGTTCTGCTGCGATACTTAAGAAAT 58.891 36.000 10.09 2.02 0.00 2.17
3977 9278 4.981806 AGCTTTCAGTGCAAAGTTTACA 57.018 36.364 13.21 0.00 36.00 2.41
4007 9380 4.079385 AGTTCCTAACCCTTTCCTTGTGTT 60.079 41.667 0.00 0.00 0.00 3.32
4022 9396 3.090952 TGTGTTGTTTACATTGCTGCC 57.909 42.857 0.00 0.00 39.39 4.85
4036 9410 1.941999 GCTGCCAGAAATGTCCTGCC 61.942 60.000 0.00 0.00 0.00 4.85
4227 9605 2.847234 TTGTGCTCCCCGTCCAGT 60.847 61.111 0.00 0.00 0.00 4.00
4315 9703 8.203485 TGCATCAGTTTGAAATTCCTTAACTTT 58.797 29.630 3.55 0.00 0.00 2.66
4348 9736 5.652014 TGTCTCTGTGTTTTCAGTTTTGGAT 59.348 36.000 0.00 0.00 36.85 3.41
4415 9803 7.815068 ACTCTATTCATGTTGACAGACTTGTAC 59.185 37.037 0.00 0.00 37.76 2.90
4443 9831 4.399395 TGGCCCAGCTCAGCTTCG 62.399 66.667 0.00 0.00 36.40 3.79
4671 10076 8.588290 TTCATAAACAGCATAAACAGGGTTAT 57.412 30.769 0.00 0.00 0.00 1.89
4717 10122 3.464828 AGAGGAAGGTGGGTCATGTAAT 58.535 45.455 0.00 0.00 0.00 1.89
4718 10123 4.631234 AGAGGAAGGTGGGTCATGTAATA 58.369 43.478 0.00 0.00 0.00 0.98
4720 10125 5.104485 AGAGGAAGGTGGGTCATGTAATAAC 60.104 44.000 0.00 0.00 0.00 1.89
4721 10126 4.079958 AGGAAGGTGGGTCATGTAATAACC 60.080 45.833 0.00 0.00 32.00 2.85
4722 10127 4.324719 GGAAGGTGGGTCATGTAATAACCA 60.325 45.833 3.21 0.00 35.79 3.67
4723 10128 5.445964 GAAGGTGGGTCATGTAATAACCAT 58.554 41.667 3.21 0.00 35.79 3.55
4726 10131 5.430417 AGGTGGGTCATGTAATAACCATGTA 59.570 40.000 3.21 0.00 35.79 2.29
4727 10132 5.763204 GGTGGGTCATGTAATAACCATGTAG 59.237 44.000 3.21 0.00 35.79 2.74
4747 10152 5.419788 TGTAGCAGGATCATGATTTTTGCTT 59.580 36.000 30.40 20.76 0.00 3.91
4748 10153 5.007385 AGCAGGATCATGATTTTTGCTTC 57.993 39.130 24.83 8.01 0.00 3.86
4749 10154 4.710375 AGCAGGATCATGATTTTTGCTTCT 59.290 37.500 24.83 8.64 0.00 2.85
4750 10155 5.041940 GCAGGATCATGATTTTTGCTTCTC 58.958 41.667 22.42 5.31 0.00 2.87
4751 10156 5.163540 GCAGGATCATGATTTTTGCTTCTCT 60.164 40.000 22.42 4.34 0.00 3.10
4752 10157 6.266323 CAGGATCATGATTTTTGCTTCTCTG 58.734 40.000 10.14 2.07 0.00 3.35
4753 10158 5.950549 AGGATCATGATTTTTGCTTCTCTGT 59.049 36.000 10.14 0.00 0.00 3.41
4754 10159 7.066645 CAGGATCATGATTTTTGCTTCTCTGTA 59.933 37.037 10.14 0.00 0.00 2.74
4755 10160 7.613022 AGGATCATGATTTTTGCTTCTCTGTAA 59.387 33.333 10.14 0.00 0.00 2.41
4756 10161 8.411683 GGATCATGATTTTTGCTTCTCTGTAAT 58.588 33.333 10.14 0.00 0.00 1.89
4801 10233 2.269023 TGGCAAATTCTCTGGAGAGGA 58.731 47.619 3.83 0.00 42.30 3.71
4802 10234 2.644299 TGGCAAATTCTCTGGAGAGGAA 59.356 45.455 3.83 0.00 42.30 3.36
4803 10235 3.277715 GGCAAATTCTCTGGAGAGGAAG 58.722 50.000 3.83 0.00 42.30 3.46
4804 10236 3.308046 GGCAAATTCTCTGGAGAGGAAGT 60.308 47.826 3.83 0.00 42.30 3.01
4807 10239 5.352846 GCAAATTCTCTGGAGAGGAAGTAAC 59.647 44.000 3.83 0.00 42.30 2.50
4814 10246 6.208994 TCTCTGGAGAGGAAGTAACTAACAAC 59.791 42.308 3.83 0.00 42.30 3.32
4866 10299 3.878237 ATGGATCTCATCTTGCATGGT 57.122 42.857 0.00 0.00 0.00 3.55
4883 10316 5.043248 GCATGGTTGTAATGACATTTAGGC 58.957 41.667 5.89 0.00 34.86 3.93
4891 10324 9.109393 GTTGTAATGACATTTAGGCTATCTGAA 57.891 33.333 5.89 0.00 34.86 3.02
4893 10326 7.715249 TGTAATGACATTTAGGCTATCTGAACC 59.285 37.037 5.89 0.00 0.00 3.62
4902 10335 2.457970 GCTATCTGAACCGACGGTTAC 58.542 52.381 31.17 22.95 46.95 2.50
4930 10363 2.019984 CAGCCTAGGGATTCAGCAAAC 58.980 52.381 11.72 0.00 0.00 2.93
4936 10369 4.082571 CCTAGGGATTCAGCAAACAACAAG 60.083 45.833 0.00 0.00 0.00 3.16
4955 10388 4.225497 GCCCGTGCTAATGCTTCT 57.775 55.556 0.00 0.00 40.48 2.85
4967 10400 5.163622 TGCTAATGCTTCTGCTGATAAAACC 60.164 40.000 0.00 0.00 40.48 3.27
4968 10401 5.163622 GCTAATGCTTCTGCTGATAAAACCA 60.164 40.000 0.00 0.00 40.48 3.67
4969 10402 5.726980 AATGCTTCTGCTGATAAAACCAA 57.273 34.783 0.00 0.00 40.48 3.67
4970 10403 4.771590 TGCTTCTGCTGATAAAACCAAG 57.228 40.909 0.00 0.00 40.48 3.61
4971 10404 4.397420 TGCTTCTGCTGATAAAACCAAGA 58.603 39.130 0.00 0.00 40.48 3.02
4972 10405 4.456911 TGCTTCTGCTGATAAAACCAAGAG 59.543 41.667 0.00 0.00 40.48 2.85
4973 10406 4.673841 GCTTCTGCTGATAAAACCAAGAGC 60.674 45.833 0.00 0.00 36.03 4.09
4974 10407 3.002791 TCTGCTGATAAAACCAAGAGCG 58.997 45.455 0.00 0.00 0.00 5.03
4975 10408 2.083774 TGCTGATAAAACCAAGAGCGG 58.916 47.619 0.00 0.00 0.00 5.52
4976 10409 1.401905 GCTGATAAAACCAAGAGCGGG 59.598 52.381 0.00 0.00 0.00 6.13
4977 10410 2.017049 CTGATAAAACCAAGAGCGGGG 58.983 52.381 0.00 0.00 0.00 5.73
4978 10411 0.738975 GATAAAACCAAGAGCGGGGC 59.261 55.000 0.00 0.00 0.00 5.80
4979 10412 1.029947 ATAAAACCAAGAGCGGGGCG 61.030 55.000 0.00 0.00 0.00 6.13
4980 10413 2.114488 TAAAACCAAGAGCGGGGCGA 62.114 55.000 0.00 0.00 0.00 5.54
4981 10414 4.699522 AACCAAGAGCGGGGCGAC 62.700 66.667 0.00 0.00 0.00 5.19
4996 10429 3.936203 GACGGTGGTGTGGAGGCA 61.936 66.667 0.00 0.00 0.00 4.75
4997 10430 3.249189 ACGGTGGTGTGGAGGCAT 61.249 61.111 0.00 0.00 0.00 4.40
4998 10431 2.436646 CGGTGGTGTGGAGGCATC 60.437 66.667 0.00 0.00 0.00 3.91
4999 10432 2.756400 GGTGGTGTGGAGGCATCA 59.244 61.111 0.00 0.00 0.00 3.07
5000 10433 1.377725 GGTGGTGTGGAGGCATCAG 60.378 63.158 0.00 0.00 29.06 2.90
5001 10434 1.377725 GTGGTGTGGAGGCATCAGG 60.378 63.158 0.00 0.00 29.06 3.86
5002 10435 1.847506 TGGTGTGGAGGCATCAGGT 60.848 57.895 0.00 0.00 0.00 4.00
5003 10436 1.380302 GGTGTGGAGGCATCAGGTT 59.620 57.895 0.00 0.00 0.00 3.50
5004 10437 0.251341 GGTGTGGAGGCATCAGGTTT 60.251 55.000 0.00 0.00 0.00 3.27
5005 10438 1.168714 GTGTGGAGGCATCAGGTTTC 58.831 55.000 0.00 0.00 0.00 2.78
5006 10439 0.038166 TGTGGAGGCATCAGGTTTCC 59.962 55.000 0.00 0.00 0.00 3.13
5007 10440 0.681243 GTGGAGGCATCAGGTTTCCC 60.681 60.000 0.00 0.00 0.00 3.97
5008 10441 1.076705 GGAGGCATCAGGTTTCCCC 60.077 63.158 0.00 0.00 0.00 4.81
5009 10442 1.691219 GAGGCATCAGGTTTCCCCA 59.309 57.895 0.00 0.00 34.66 4.96
5010 10443 0.039618 GAGGCATCAGGTTTCCCCAA 59.960 55.000 0.00 0.00 34.66 4.12
5011 10444 0.040204 AGGCATCAGGTTTCCCCAAG 59.960 55.000 0.00 0.00 34.66 3.61
5012 10445 0.972471 GGCATCAGGTTTCCCCAAGG 60.972 60.000 0.00 0.00 34.66 3.61
5013 10446 0.972471 GCATCAGGTTTCCCCAAGGG 60.972 60.000 0.00 0.00 46.11 3.95
5024 10457 3.500635 CCAAGGGAGTGGGAAGCT 58.499 61.111 0.00 0.00 34.77 3.74
5025 10458 1.770324 CCAAGGGAGTGGGAAGCTT 59.230 57.895 0.00 0.00 34.77 3.74
5026 10459 0.610232 CCAAGGGAGTGGGAAGCTTG 60.610 60.000 2.10 0.00 34.77 4.01
5027 10460 0.610232 CAAGGGAGTGGGAAGCTTGG 60.610 60.000 2.10 0.00 0.00 3.61
5028 10461 1.793820 AAGGGAGTGGGAAGCTTGGG 61.794 60.000 2.10 0.00 0.00 4.12
5029 10462 2.361737 GGAGTGGGAAGCTTGGGC 60.362 66.667 2.10 0.00 39.06 5.36
5030 10463 2.436109 GAGTGGGAAGCTTGGGCA 59.564 61.111 2.10 0.00 41.70 5.36
5031 10464 1.228552 GAGTGGGAAGCTTGGGCAA 60.229 57.895 2.10 0.00 41.70 4.52
5032 10465 0.827507 GAGTGGGAAGCTTGGGCAAA 60.828 55.000 2.10 0.00 41.70 3.68
5033 10466 0.178924 AGTGGGAAGCTTGGGCAAAT 60.179 50.000 2.10 0.00 41.70 2.32
5034 10467 0.037046 GTGGGAAGCTTGGGCAAATG 60.037 55.000 2.10 0.00 41.70 2.32
5035 10468 0.471591 TGGGAAGCTTGGGCAAATGT 60.472 50.000 2.10 0.00 41.70 2.71
5036 10469 0.247460 GGGAAGCTTGGGCAAATGTC 59.753 55.000 2.10 0.00 41.70 3.06
5037 10470 0.968405 GGAAGCTTGGGCAAATGTCA 59.032 50.000 2.10 0.00 41.70 3.58
5038 10471 1.551883 GGAAGCTTGGGCAAATGTCAT 59.448 47.619 2.10 0.00 41.70 3.06
5039 10472 2.613691 GAAGCTTGGGCAAATGTCATG 58.386 47.619 2.10 0.00 41.70 3.07
5040 10473 1.636148 AGCTTGGGCAAATGTCATGT 58.364 45.000 0.00 0.00 41.70 3.21
5041 10474 1.547372 AGCTTGGGCAAATGTCATGTC 59.453 47.619 0.00 0.00 41.70 3.06
5042 10475 1.733389 GCTTGGGCAAATGTCATGTCG 60.733 52.381 0.00 0.00 38.54 4.35
5043 10476 1.811965 CTTGGGCAAATGTCATGTCGA 59.188 47.619 0.00 0.00 0.00 4.20
5044 10477 1.164411 TGGGCAAATGTCATGTCGAC 58.836 50.000 9.11 9.11 45.61 4.20
5045 10478 1.271325 TGGGCAAATGTCATGTCGACT 60.271 47.619 17.92 0.00 45.60 4.18
5046 10479 1.131126 GGGCAAATGTCATGTCGACTG 59.869 52.381 17.92 12.33 45.60 3.51
5047 10480 1.131126 GGCAAATGTCATGTCGACTGG 59.869 52.381 17.92 8.87 45.60 4.00
5048 10481 1.806542 GCAAATGTCATGTCGACTGGT 59.193 47.619 17.92 0.00 45.60 4.00
5049 10482 2.226437 GCAAATGTCATGTCGACTGGTT 59.774 45.455 17.92 6.33 45.60 3.67
5050 10483 3.667960 GCAAATGTCATGTCGACTGGTTC 60.668 47.826 17.92 4.46 45.60 3.62
5051 10484 3.401033 AATGTCATGTCGACTGGTTCA 57.599 42.857 17.92 9.83 45.60 3.18
5052 10485 2.900716 TGTCATGTCGACTGGTTCAA 57.099 45.000 17.92 0.00 45.60 2.69
5053 10486 3.401033 TGTCATGTCGACTGGTTCAAT 57.599 42.857 17.92 0.00 45.60 2.57
5054 10487 3.325870 TGTCATGTCGACTGGTTCAATC 58.674 45.455 17.92 0.00 45.60 2.67
5055 10488 2.345641 GTCATGTCGACTGGTTCAATCG 59.654 50.000 17.92 0.00 41.81 3.34
5056 10489 2.029380 TCATGTCGACTGGTTCAATCGT 60.029 45.455 17.92 0.00 37.16 3.73
5057 10490 2.060326 TGTCGACTGGTTCAATCGTC 57.940 50.000 17.92 0.00 37.16 4.20
5058 10491 1.336517 TGTCGACTGGTTCAATCGTCC 60.337 52.381 17.92 0.00 37.16 4.79
5059 10492 0.245539 TCGACTGGTTCAATCGTCCC 59.754 55.000 0.00 0.00 37.16 4.46
5060 10493 0.739813 CGACTGGTTCAATCGTCCCC 60.740 60.000 0.00 0.00 0.00 4.81
5061 10494 0.613777 GACTGGTTCAATCGTCCCCT 59.386 55.000 0.00 0.00 0.00 4.79
5062 10495 0.613777 ACTGGTTCAATCGTCCCCTC 59.386 55.000 0.00 0.00 0.00 4.30
5063 10496 0.460284 CTGGTTCAATCGTCCCCTCG 60.460 60.000 0.00 0.00 0.00 4.63
5064 10497 0.901114 TGGTTCAATCGTCCCCTCGA 60.901 55.000 0.00 0.00 43.86 4.04
5065 10498 0.179108 GGTTCAATCGTCCCCTCGAG 60.179 60.000 5.13 5.13 43.00 4.04
5066 10499 0.179108 GTTCAATCGTCCCCTCGAGG 60.179 60.000 25.36 25.36 43.00 4.63
5077 10510 3.748863 CCTCGAGGGAGTCACATTG 57.251 57.895 24.62 0.00 38.70 2.82
5078 10511 0.460987 CCTCGAGGGAGTCACATTGC 60.461 60.000 24.62 0.00 38.70 3.56
5079 10512 0.460987 CTCGAGGGAGTCACATTGCC 60.461 60.000 3.91 0.00 35.48 4.52
5080 10513 1.811266 CGAGGGAGTCACATTGCCG 60.811 63.158 0.00 0.00 0.00 5.69
5081 10514 2.045926 AGGGAGTCACATTGCCGC 60.046 61.111 0.00 0.00 0.00 6.53
5082 10515 3.499737 GGGAGTCACATTGCCGCG 61.500 66.667 0.00 0.00 0.00 6.46
5083 10516 3.499737 GGAGTCACATTGCCGCGG 61.500 66.667 24.05 24.05 0.00 6.46
5084 10517 4.166011 GAGTCACATTGCCGCGGC 62.166 66.667 42.35 42.35 42.35 6.53
5085 10518 4.704833 AGTCACATTGCCGCGGCT 62.705 61.111 45.79 28.60 42.51 5.52
5086 10519 4.465512 GTCACATTGCCGCGGCTG 62.466 66.667 45.79 38.06 42.51 4.85
5087 10520 4.695993 TCACATTGCCGCGGCTGA 62.696 61.111 45.79 37.20 42.51 4.26
5088 10521 3.736100 CACATTGCCGCGGCTGAA 61.736 61.111 45.79 34.57 42.51 3.02
5089 10522 2.751436 ACATTGCCGCGGCTGAAT 60.751 55.556 45.79 35.12 42.51 2.57
5090 10523 2.278336 CATTGCCGCGGCTGAATG 60.278 61.111 45.79 39.50 42.51 2.67
5091 10524 2.751436 ATTGCCGCGGCTGAATGT 60.751 55.556 45.79 24.23 42.51 2.71
5092 10525 2.342650 ATTGCCGCGGCTGAATGTT 61.343 52.632 45.79 22.02 42.51 2.71
5093 10526 1.029408 ATTGCCGCGGCTGAATGTTA 61.029 50.000 45.79 24.59 42.51 2.41
5094 10527 1.029408 TTGCCGCGGCTGAATGTTAT 61.029 50.000 45.79 0.00 42.51 1.89
5095 10528 1.009675 GCCGCGGCTGAATGTTATG 60.010 57.895 41.71 4.08 38.26 1.90
5096 10529 1.436195 GCCGCGGCTGAATGTTATGA 61.436 55.000 41.71 0.00 38.26 2.15
5097 10530 0.583438 CCGCGGCTGAATGTTATGAG 59.417 55.000 14.67 0.00 0.00 2.90
5098 10531 1.570813 CGCGGCTGAATGTTATGAGA 58.429 50.000 0.00 0.00 0.00 3.27
5099 10532 1.933181 CGCGGCTGAATGTTATGAGAA 59.067 47.619 0.00 0.00 0.00 2.87
5100 10533 2.033407 CGCGGCTGAATGTTATGAGAAG 60.033 50.000 0.00 0.00 0.00 2.85
5101 10534 2.286654 GCGGCTGAATGTTATGAGAAGC 60.287 50.000 0.00 0.00 0.00 3.86
5102 10535 2.938451 CGGCTGAATGTTATGAGAAGCA 59.062 45.455 0.00 0.00 0.00 3.91
5103 10536 3.002042 CGGCTGAATGTTATGAGAAGCAG 59.998 47.826 0.00 0.00 0.00 4.24
5104 10537 4.194640 GGCTGAATGTTATGAGAAGCAGA 58.805 43.478 0.00 0.00 0.00 4.26
5105 10538 4.637534 GGCTGAATGTTATGAGAAGCAGAA 59.362 41.667 0.00 0.00 0.00 3.02
5106 10539 5.298777 GGCTGAATGTTATGAGAAGCAGAAT 59.701 40.000 0.00 0.00 29.31 2.40
5107 10540 6.183360 GGCTGAATGTTATGAGAAGCAGAATT 60.183 38.462 0.00 0.00 29.31 2.17
5108 10541 7.256286 GCTGAATGTTATGAGAAGCAGAATTT 58.744 34.615 0.00 0.00 29.31 1.82
5109 10542 7.431668 GCTGAATGTTATGAGAAGCAGAATTTC 59.568 37.037 0.00 0.00 29.31 2.17
5110 10543 7.466805 TGAATGTTATGAGAAGCAGAATTTCG 58.533 34.615 0.00 0.00 31.15 3.46
5111 10544 6.992063 ATGTTATGAGAAGCAGAATTTCGT 57.008 33.333 0.00 0.00 29.31 3.85
5112 10545 6.169419 TGTTATGAGAAGCAGAATTTCGTG 57.831 37.500 0.00 0.00 29.31 4.35
5113 10546 5.122239 TGTTATGAGAAGCAGAATTTCGTGG 59.878 40.000 0.00 0.00 29.31 4.94
5114 10547 3.401033 TGAGAAGCAGAATTTCGTGGA 57.599 42.857 0.00 0.00 0.00 4.02
5115 10548 3.942829 TGAGAAGCAGAATTTCGTGGAT 58.057 40.909 0.00 0.00 0.00 3.41
5116 10549 3.686241 TGAGAAGCAGAATTTCGTGGATG 59.314 43.478 0.00 0.00 0.00 3.51
5117 10550 2.421424 AGAAGCAGAATTTCGTGGATGC 59.579 45.455 0.61 0.61 0.00 3.91
5118 10551 1.825090 AGCAGAATTTCGTGGATGCA 58.175 45.000 9.41 0.00 36.15 3.96
5119 10552 1.741706 AGCAGAATTTCGTGGATGCAG 59.258 47.619 9.41 0.00 36.15 4.41
5120 10553 1.470098 GCAGAATTTCGTGGATGCAGT 59.530 47.619 0.00 0.00 33.92 4.40
5121 10554 2.095059 GCAGAATTTCGTGGATGCAGTT 60.095 45.455 0.00 0.00 33.92 3.16
5122 10555 3.612479 GCAGAATTTCGTGGATGCAGTTT 60.612 43.478 0.00 0.00 33.92 2.66
5123 10556 4.549458 CAGAATTTCGTGGATGCAGTTTT 58.451 39.130 0.00 0.00 0.00 2.43
5124 10557 4.618489 CAGAATTTCGTGGATGCAGTTTTC 59.382 41.667 0.00 0.00 0.00 2.29
5125 10558 4.278170 AGAATTTCGTGGATGCAGTTTTCA 59.722 37.500 0.00 0.00 0.00 2.69
5126 10559 3.624326 TTTCGTGGATGCAGTTTTCAG 57.376 42.857 0.00 0.00 0.00 3.02
5127 10560 0.874390 TCGTGGATGCAGTTTTCAGC 59.126 50.000 0.00 0.00 0.00 4.26
5128 10561 0.877071 CGTGGATGCAGTTTTCAGCT 59.123 50.000 0.00 0.00 33.40 4.24
5129 10562 1.400629 CGTGGATGCAGTTTTCAGCTG 60.401 52.381 7.63 7.63 37.06 4.24
5135 10568 1.208614 CAGTTTTCAGCTGCTCGGC 59.791 57.895 9.47 0.00 0.00 5.54
5136 10569 2.174349 GTTTTCAGCTGCTCGGCG 59.826 61.111 9.47 0.00 37.29 6.46
5137 10570 2.030412 TTTTCAGCTGCTCGGCGA 59.970 55.556 10.14 10.14 37.29 5.54
5138 10571 1.375908 TTTTCAGCTGCTCGGCGAT 60.376 52.632 11.27 0.00 37.29 4.58
5139 10572 0.955428 TTTTCAGCTGCTCGGCGATT 60.955 50.000 11.27 0.00 37.29 3.34
5140 10573 0.955428 TTTCAGCTGCTCGGCGATTT 60.955 50.000 11.27 0.00 37.29 2.17
5141 10574 0.955428 TTCAGCTGCTCGGCGATTTT 60.955 50.000 11.27 0.00 37.29 1.82
5142 10575 1.226211 CAGCTGCTCGGCGATTTTG 60.226 57.895 11.27 0.00 37.29 2.44
5143 10576 1.672356 AGCTGCTCGGCGATTTTGT 60.672 52.632 11.27 0.00 37.29 2.83
5144 10577 1.512734 GCTGCTCGGCGATTTTGTG 60.513 57.895 11.27 0.00 0.00 3.33
5145 10578 1.512734 CTGCTCGGCGATTTTGTGC 60.513 57.895 11.27 10.08 0.00 4.57
5146 10579 1.915614 CTGCTCGGCGATTTTGTGCT 61.916 55.000 11.27 0.00 0.00 4.40
5147 10580 1.512734 GCTCGGCGATTTTGTGCTG 60.513 57.895 11.27 0.00 38.85 4.41
5148 10581 1.135315 CTCGGCGATTTTGTGCTGG 59.865 57.895 11.27 0.00 38.05 4.85
5149 10582 1.298157 CTCGGCGATTTTGTGCTGGA 61.298 55.000 11.27 0.00 38.05 3.86
5150 10583 1.135315 CGGCGATTTTGTGCTGGAG 59.865 57.895 0.00 0.00 33.80 3.86
5151 10584 1.508088 GGCGATTTTGTGCTGGAGG 59.492 57.895 0.00 0.00 0.00 4.30
5152 10585 1.244019 GGCGATTTTGTGCTGGAGGT 61.244 55.000 0.00 0.00 0.00 3.85
5153 10586 0.109597 GCGATTTTGTGCTGGAGGTG 60.110 55.000 0.00 0.00 0.00 4.00
5154 10587 1.522668 CGATTTTGTGCTGGAGGTGA 58.477 50.000 0.00 0.00 0.00 4.02
5155 10588 2.086869 CGATTTTGTGCTGGAGGTGAT 58.913 47.619 0.00 0.00 0.00 3.06
5156 10589 2.096496 CGATTTTGTGCTGGAGGTGATC 59.904 50.000 0.00 0.00 0.00 2.92
5157 10590 2.957402 TTTTGTGCTGGAGGTGATCT 57.043 45.000 0.00 0.00 0.00 2.75
5158 10591 2.479566 TTTGTGCTGGAGGTGATCTC 57.520 50.000 0.00 0.00 41.71 2.75
5159 10592 1.649321 TTGTGCTGGAGGTGATCTCT 58.351 50.000 0.00 0.00 42.10 3.10
5160 10593 0.900421 TGTGCTGGAGGTGATCTCTG 59.100 55.000 0.00 0.00 42.10 3.35
5161 10594 1.189752 GTGCTGGAGGTGATCTCTGA 58.810 55.000 0.00 0.00 42.10 3.27
5162 10595 1.761784 GTGCTGGAGGTGATCTCTGAT 59.238 52.381 0.00 0.00 42.10 2.90
5163 10596 2.037901 TGCTGGAGGTGATCTCTGATC 58.962 52.381 0.00 0.98 42.10 2.92
5164 10597 1.344114 GCTGGAGGTGATCTCTGATCC 59.656 57.143 5.27 1.28 42.10 3.36
5165 10598 1.969923 CTGGAGGTGATCTCTGATCCC 59.030 57.143 5.27 6.17 42.10 3.85
5166 10599 0.965439 GGAGGTGATCTCTGATCCCG 59.035 60.000 5.27 0.00 42.10 5.14
5167 10600 0.965439 GAGGTGATCTCTGATCCCGG 59.035 60.000 0.00 0.00 39.38 5.73
5168 10601 0.558220 AGGTGATCTCTGATCCCGGA 59.442 55.000 0.73 0.00 0.00 5.14
5169 10602 1.148867 AGGTGATCTCTGATCCCGGAT 59.851 52.381 0.73 0.00 0.00 4.18
5170 10603 1.974236 GGTGATCTCTGATCCCGGATT 59.026 52.381 0.73 0.00 0.00 3.01
5171 10604 2.370189 GGTGATCTCTGATCCCGGATTT 59.630 50.000 0.73 0.00 0.00 2.17
5172 10605 3.397482 GTGATCTCTGATCCCGGATTTG 58.603 50.000 0.73 0.00 0.00 2.32
5173 10606 3.041211 TGATCTCTGATCCCGGATTTGT 58.959 45.455 0.73 0.00 0.00 2.83
5174 10607 2.988010 TCTCTGATCCCGGATTTGTG 57.012 50.000 0.73 0.00 0.00 3.33
5175 10608 1.134401 TCTCTGATCCCGGATTTGTGC 60.134 52.381 0.73 0.00 0.00 4.57
5176 10609 0.911769 TCTGATCCCGGATTTGTGCT 59.088 50.000 0.73 0.00 0.00 4.40
5177 10610 1.134401 TCTGATCCCGGATTTGTGCTC 60.134 52.381 0.73 0.00 0.00 4.26
5178 10611 0.107214 TGATCCCGGATTTGTGCTCC 60.107 55.000 0.73 0.00 0.00 4.70
5179 10612 0.107214 GATCCCGGATTTGTGCTCCA 60.107 55.000 0.73 0.00 32.72 3.86
5180 10613 0.394352 ATCCCGGATTTGTGCTCCAC 60.394 55.000 0.73 0.00 32.72 4.02
5181 10614 2.398554 CCCGGATTTGTGCTCCACG 61.399 63.158 0.73 0.00 37.14 4.94
5182 10615 2.398554 CCGGATTTGTGCTCCACGG 61.399 63.158 0.00 0.00 37.14 4.94
5183 10616 1.375396 CGGATTTGTGCTCCACGGA 60.375 57.895 0.00 0.00 37.14 4.69
5184 10617 1.361668 CGGATTTGTGCTCCACGGAG 61.362 60.000 8.84 8.84 44.56 4.63
5195 10628 4.767255 CACGGAGCTGGCCCACTC 62.767 72.222 12.61 12.61 0.00 3.51
5199 10632 4.021925 GAGCTGGCCCACTCGGTT 62.022 66.667 0.00 0.00 0.00 4.44
5200 10633 3.959991 GAGCTGGCCCACTCGGTTC 62.960 68.421 0.00 0.00 0.00 3.62
5201 10634 4.329545 GCTGGCCCACTCGGTTCA 62.330 66.667 0.00 0.00 0.00 3.18
5202 10635 2.358737 CTGGCCCACTCGGTTCAC 60.359 66.667 0.00 0.00 0.00 3.18
5203 10636 3.901797 CTGGCCCACTCGGTTCACC 62.902 68.421 0.00 0.00 0.00 4.02
5214 10647 1.509923 GGTTCACCGGTAGGAGTCG 59.490 63.158 6.87 0.00 41.02 4.18
5215 10648 1.153881 GTTCACCGGTAGGAGTCGC 60.154 63.158 6.87 0.00 41.02 5.19
5216 10649 2.345760 TTCACCGGTAGGAGTCGCC 61.346 63.158 6.87 0.00 41.02 5.54
5217 10650 4.189188 CACCGGTAGGAGTCGCCG 62.189 72.222 6.87 11.06 43.43 6.46
5220 10653 3.584052 CGGTAGGAGTCGCCGGAG 61.584 72.222 5.05 0.00 43.43 4.63
5252 10685 2.498077 GAGAGCTCCAAAATGGGCC 58.502 57.895 10.93 0.00 38.32 5.80
5253 10686 1.000866 AGAGCTCCAAAATGGGCCC 59.999 57.895 17.59 17.59 38.32 5.80
5254 10687 1.000866 GAGCTCCAAAATGGGCCCT 59.999 57.895 25.70 5.48 38.32 5.19
5255 10688 0.615827 GAGCTCCAAAATGGGCCCTT 60.616 55.000 25.70 15.22 38.32 3.95
5256 10689 0.709992 AGCTCCAAAATGGGCCCTTA 59.290 50.000 25.70 2.97 38.32 2.69
5257 10690 1.078656 AGCTCCAAAATGGGCCCTTAA 59.921 47.619 25.70 2.00 38.32 1.85
5258 10691 1.207089 GCTCCAAAATGGGCCCTTAAC 59.793 52.381 25.70 0.00 38.32 2.01
5259 10692 1.831106 CTCCAAAATGGGCCCTTAACC 59.169 52.381 25.70 0.00 38.32 2.85
5260 10693 1.150135 TCCAAAATGGGCCCTTAACCA 59.850 47.619 25.70 0.07 38.32 3.67
5261 10694 1.981495 CCAAAATGGGCCCTTAACCAA 59.019 47.619 25.70 0.00 40.73 3.67
5262 10695 2.373502 CCAAAATGGGCCCTTAACCAAA 59.626 45.455 25.70 0.00 40.73 3.28
5263 10696 3.558958 CCAAAATGGGCCCTTAACCAAAG 60.559 47.826 25.70 3.78 40.73 2.77
5264 10697 1.275666 AATGGGCCCTTAACCAAAGC 58.724 50.000 25.70 0.00 40.73 3.51
5265 10698 0.413434 ATGGGCCCTTAACCAAAGCT 59.587 50.000 25.70 0.00 40.73 3.74
5266 10699 0.251608 TGGGCCCTTAACCAAAGCTC 60.252 55.000 25.70 0.00 32.89 4.09
5267 10700 0.970937 GGGCCCTTAACCAAAGCTCC 60.971 60.000 17.04 0.00 33.49 4.70
5268 10701 0.970937 GGCCCTTAACCAAAGCTCCC 60.971 60.000 0.00 0.00 33.49 4.30
5269 10702 0.251608 GCCCTTAACCAAAGCTCCCA 60.252 55.000 0.00 0.00 33.49 4.37
5270 10703 1.839424 CCCTTAACCAAAGCTCCCAG 58.161 55.000 0.00 0.00 33.49 4.45
5271 10704 1.177401 CCTTAACCAAAGCTCCCAGC 58.823 55.000 0.00 0.00 42.84 4.85
5272 10705 1.547675 CCTTAACCAAAGCTCCCAGCA 60.548 52.381 0.00 0.00 45.56 4.41
5273 10706 1.541588 CTTAACCAAAGCTCCCAGCAC 59.458 52.381 0.00 0.00 45.56 4.40
5274 10707 0.771127 TAACCAAAGCTCCCAGCACT 59.229 50.000 0.00 0.00 45.56 4.40
5275 10708 0.771127 AACCAAAGCTCCCAGCACTA 59.229 50.000 0.00 0.00 45.56 2.74
5276 10709 0.995024 ACCAAAGCTCCCAGCACTAT 59.005 50.000 0.00 0.00 45.56 2.12
5277 10710 1.065126 ACCAAAGCTCCCAGCACTATC 60.065 52.381 0.00 0.00 45.56 2.08
5278 10711 1.065199 CCAAAGCTCCCAGCACTATCA 60.065 52.381 0.00 0.00 45.56 2.15
5279 10712 2.618816 CCAAAGCTCCCAGCACTATCAA 60.619 50.000 0.00 0.00 45.56 2.57
5280 10713 2.409948 AAGCTCCCAGCACTATCAAC 57.590 50.000 0.00 0.00 45.56 3.18
5281 10714 1.577736 AGCTCCCAGCACTATCAACT 58.422 50.000 0.00 0.00 45.56 3.16
5282 10715 1.912043 AGCTCCCAGCACTATCAACTT 59.088 47.619 0.00 0.00 45.56 2.66
5283 10716 3.107601 AGCTCCCAGCACTATCAACTTA 58.892 45.455 0.00 0.00 45.56 2.24
5284 10717 3.133721 AGCTCCCAGCACTATCAACTTAG 59.866 47.826 0.00 0.00 45.56 2.18
5285 10718 3.742640 GCTCCCAGCACTATCAACTTAGG 60.743 52.174 0.00 0.00 41.89 2.69
5286 10719 2.771943 TCCCAGCACTATCAACTTAGGG 59.228 50.000 0.00 0.00 35.09 3.53
5287 10720 2.565841 CCAGCACTATCAACTTAGGGC 58.434 52.381 0.00 0.00 46.85 5.19
5291 10724 4.078639 GCACTATCAACTTAGGGCATCT 57.921 45.455 0.99 0.00 45.96 2.90
5292 10725 4.061596 GCACTATCAACTTAGGGCATCTC 58.938 47.826 0.99 0.00 45.96 2.75
5293 10726 4.636249 CACTATCAACTTAGGGCATCTCC 58.364 47.826 0.00 0.00 0.00 3.71
5294 10727 4.101585 CACTATCAACTTAGGGCATCTCCA 59.898 45.833 0.00 0.00 36.21 3.86
5295 10728 4.721776 ACTATCAACTTAGGGCATCTCCAA 59.278 41.667 0.00 0.00 36.21 3.53
5296 10729 3.350219 TCAACTTAGGGCATCTCCAAC 57.650 47.619 0.00 0.00 36.21 3.77
5297 10730 2.009774 CAACTTAGGGCATCTCCAACG 58.990 52.381 0.00 0.00 36.21 4.10
5298 10731 0.541863 ACTTAGGGCATCTCCAACGG 59.458 55.000 0.00 0.00 36.21 4.44
5299 10732 0.815615 CTTAGGGCATCTCCAACGGC 60.816 60.000 0.00 0.00 36.21 5.68
5300 10733 1.558167 TTAGGGCATCTCCAACGGCA 61.558 55.000 0.00 0.00 36.21 5.69
5301 10734 1.558167 TAGGGCATCTCCAACGGCAA 61.558 55.000 0.00 0.00 36.21 4.52
5302 10735 1.754234 GGGCATCTCCAACGGCAAT 60.754 57.895 0.00 0.00 36.21 3.56
5303 10736 1.728490 GGGCATCTCCAACGGCAATC 61.728 60.000 0.00 0.00 36.21 2.67
5304 10737 0.749454 GGCATCTCCAACGGCAATCT 60.749 55.000 0.00 0.00 34.01 2.40
5305 10738 0.379669 GCATCTCCAACGGCAATCTG 59.620 55.000 0.00 0.00 0.00 2.90
5306 10739 0.379669 CATCTCCAACGGCAATCTGC 59.620 55.000 0.00 0.00 44.08 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.350951 GTACTTGCTAAATATTATTTCCCCAGT 57.649 33.333 4.94 7.55 0.00 4.00
40 41 3.565905 AGTGTAGGTGTACGTACTTGC 57.434 47.619 25.12 15.08 37.89 4.01
59 60 2.130395 CATGCTGCTATGACGGTGTAG 58.870 52.381 0.00 0.00 0.00 2.74
66 67 2.480802 CTGATGCTCATGCTGCTATGAC 59.519 50.000 0.00 4.95 40.48 3.06
90 91 4.971282 AGGTTCTCATAACTGGGATCATCA 59.029 41.667 0.00 0.00 30.04 3.07
94 95 7.451877 TGACTATAGGTTCTCATAACTGGGATC 59.548 40.741 4.43 0.00 30.04 3.36
121 122 3.633986 CACCCTAAATCATTCCTTCTGCC 59.366 47.826 0.00 0.00 0.00 4.85
122 123 4.526970 TCACCCTAAATCATTCCTTCTGC 58.473 43.478 0.00 0.00 0.00 4.26
143 144 8.668353 TGTTCATTGAAATCTGTATGCTTACTC 58.332 33.333 10.74 1.20 0.00 2.59
145 146 9.443283 GATGTTCATTGAAATCTGTATGCTTAC 57.557 33.333 0.00 2.86 0.00 2.34
176 181 9.463443 CAGAATGTTTTCCGAGAGTTTATTTTT 57.537 29.630 0.00 0.00 31.84 1.94
177 182 8.846211 TCAGAATGTTTTCCGAGAGTTTATTTT 58.154 29.630 0.00 0.00 37.40 1.82
178 183 8.391075 TCAGAATGTTTTCCGAGAGTTTATTT 57.609 30.769 0.00 0.00 37.40 1.40
179 184 7.979444 TCAGAATGTTTTCCGAGAGTTTATT 57.021 32.000 0.00 0.00 37.40 1.40
180 185 7.414540 GCATCAGAATGTTTTCCGAGAGTTTAT 60.415 37.037 0.00 0.00 37.40 1.40
182 187 5.335191 GCATCAGAATGTTTTCCGAGAGTTT 60.335 40.000 0.00 0.00 37.40 2.66
185 190 3.686241 TGCATCAGAATGTTTTCCGAGAG 59.314 43.478 0.00 0.00 37.40 3.20
187 192 3.181503 CCTGCATCAGAATGTTTTCCGAG 60.182 47.826 0.00 0.00 37.40 4.63
188 193 2.749076 CCTGCATCAGAATGTTTTCCGA 59.251 45.455 0.00 0.00 37.40 4.55
190 195 3.841643 CACCTGCATCAGAATGTTTTCC 58.158 45.455 0.00 0.00 37.40 3.13
191 196 3.248266 GCACCTGCATCAGAATGTTTTC 58.752 45.455 0.00 0.00 41.59 2.29
275 280 5.187576 CAGATTGCCTTTGGAATCCCTTTTA 59.812 40.000 0.00 0.00 30.13 1.52
287 292 9.970395 TTAATTATATCTTGCAGATTGCCTTTG 57.030 29.630 4.35 0.00 44.23 2.77
354 3487 7.936847 ACTTACAAATGTGAGAGTAATCCACAA 59.063 33.333 15.16 0.83 43.02 3.33
483 3616 4.382470 CCAATTCCAAAGTGGTGTTGACAA 60.382 41.667 12.67 0.00 41.53 3.18
488 3621 2.758130 ACCCAATTCCAAAGTGGTGTT 58.242 42.857 5.55 0.00 44.83 3.32
493 3626 5.782893 TTGTCTAACCCAATTCCAAAGTG 57.217 39.130 0.00 0.00 0.00 3.16
494 3627 6.326323 ACATTTGTCTAACCCAATTCCAAAGT 59.674 34.615 0.00 0.00 0.00 2.66
495 3628 6.758254 ACATTTGTCTAACCCAATTCCAAAG 58.242 36.000 0.00 0.00 0.00 2.77
496 3629 6.739331 ACATTTGTCTAACCCAATTCCAAA 57.261 33.333 0.00 0.00 0.00 3.28
499 3632 9.549078 TTTAAAACATTTGTCTAACCCAATTCC 57.451 29.630 0.00 0.00 0.00 3.01
521 3656 5.332732 CGCACGTTCTCAACACTACATTTAA 60.333 40.000 0.00 0.00 0.00 1.52
534 3669 1.953772 TGCTAGACGCACGTTCTCA 59.046 52.632 0.00 0.00 45.47 3.27
568 3703 1.923395 TTGGTAGCCCCACTCCAGG 60.923 63.158 0.00 0.00 45.19 4.45
589 3724 2.959030 GGGCCTTCTTTGTTCAAACTCT 59.041 45.455 0.84 0.00 0.00 3.24
608 3743 1.961277 GACAACACACAGCGAGGGG 60.961 63.158 0.00 0.00 0.00 4.79
612 3747 2.094757 ATCCCGACAACACACAGCGA 62.095 55.000 0.00 0.00 0.00 4.93
744 3887 5.007626 GCGTCACTGAAATTGCCATAGAATA 59.992 40.000 0.00 0.00 0.00 1.75
779 3933 1.000731 GCCATGCTTGCCAACTAAACA 59.999 47.619 0.00 0.00 0.00 2.83
790 3944 0.863144 GCACAAAGTTGCCATGCTTG 59.137 50.000 0.00 0.00 36.42 4.01
812 3966 6.348376 CGGCAATTTTCTGGCAAAAATACATT 60.348 34.615 15.65 0.13 41.82 2.71
813 3967 5.122082 CGGCAATTTTCTGGCAAAAATACAT 59.878 36.000 15.65 4.10 41.82 2.29
1017 4204 1.034838 TTCCTCTCTCGCTGCTCTCC 61.035 60.000 0.00 0.00 0.00 3.71
1226 4422 0.396811 CGCTAGGGTTTGGGGGATAG 59.603 60.000 0.00 0.00 0.00 2.08
1227 4423 1.702022 GCGCTAGGGTTTGGGGGATA 61.702 60.000 8.77 0.00 0.00 2.59
1228 4424 3.056754 GCGCTAGGGTTTGGGGGAT 62.057 63.158 8.77 0.00 0.00 3.85
1268 4704 0.901580 CTTGGCCTCCTGCAACCAAT 60.902 55.000 3.32 0.00 41.17 3.16
1273 4750 0.538057 CAGAACTTGGCCTCCTGCAA 60.538 55.000 3.32 0.00 43.89 4.08
1435 4912 1.401905 GCAAAACCTAGAGCGGGATTG 59.598 52.381 0.00 0.00 0.00 2.67
1455 4932 3.207669 GATGCCGCTGAAGCTGGG 61.208 66.667 12.79 4.16 39.32 4.45
1544 5074 3.002656 CAGCCCAGTGCAAGATATTAACG 59.997 47.826 0.00 0.00 44.83 3.18
1557 5087 0.673644 CGTTTAGGACCAGCCCAGTG 60.674 60.000 0.00 0.00 37.37 3.66
1562 5092 1.873863 GCAACGTTTAGGACCAGCC 59.126 57.895 0.00 0.00 0.00 4.85
1563 5093 1.495951 CGCAACGTTTAGGACCAGC 59.504 57.895 0.00 0.00 0.00 4.85
1569 5099 4.454717 GGGCGCGCAACGTTTAGG 62.455 66.667 34.42 0.00 46.11 2.69
1587 5136 1.340658 CATCTGACGGACAGTGAACG 58.659 55.000 7.32 3.18 45.86 3.95
1595 5144 1.927174 CAAACGATCCATCTGACGGAC 59.073 52.381 0.00 0.00 34.69 4.79
1598 5147 4.404507 AAAACAAACGATCCATCTGACG 57.595 40.909 0.00 0.00 0.00 4.35
1610 5159 4.320690 CACTGCAATCGGATAAAACAAACG 59.679 41.667 0.00 0.00 0.00 3.60
1614 5163 4.083003 GGTTCACTGCAATCGGATAAAACA 60.083 41.667 0.00 0.00 0.00 2.83
1623 5172 0.999406 CTACCGGTTCACTGCAATCG 59.001 55.000 15.04 0.00 0.00 3.34
1657 5206 3.334583 AAGAGAATCCTACTTGCGCAA 57.665 42.857 23.48 23.48 33.66 4.85
1686 5235 8.671028 TGTGTATCTCATCAAGAAAATGACATG 58.329 33.333 0.00 0.00 37.61 3.21
1705 5254 6.978080 TGCTTCAAACCTTTCTTTTGTGTATC 59.022 34.615 0.00 0.00 35.75 2.24
1709 5261 5.062558 CAGTGCTTCAAACCTTTCTTTTGTG 59.937 40.000 0.00 0.00 35.75 3.33
1741 5293 4.065321 AGCACCATCACTCTGCTATAAC 57.935 45.455 0.00 0.00 39.52 1.89
1785 5337 3.139025 AGCAATATGCCCCTTGATGTACT 59.861 43.478 0.00 0.00 46.52 2.73
1815 5375 3.065371 GCATGCATTCCAGGTACTTACAC 59.935 47.826 14.21 0.00 34.60 2.90
1817 5377 2.618709 GGCATGCATTCCAGGTACTTAC 59.381 50.000 21.36 0.00 34.60 2.34
1818 5378 2.240921 TGGCATGCATTCCAGGTACTTA 59.759 45.455 21.36 0.00 34.60 2.24
1819 5379 1.005805 TGGCATGCATTCCAGGTACTT 59.994 47.619 21.36 0.00 34.60 2.24
1820 5380 0.625316 TGGCATGCATTCCAGGTACT 59.375 50.000 21.36 0.00 43.88 2.73
2112 5675 3.132111 GTCAAAGTGACCATGGGTTTTGT 59.868 43.478 18.09 0.00 41.37 2.83
2128 5695 2.719798 CGCTGTTGAAACCTGTCAAAG 58.280 47.619 0.00 0.00 39.18 2.77
2140 5707 1.375853 AACACTTGCAGCGCTGTTGA 61.376 50.000 35.80 21.34 0.00 3.18
2195 5768 5.180868 CAGAGGAAATAATGCAGATGCCTAC 59.819 44.000 1.72 0.00 41.18 3.18
2227 5800 5.065859 GGCATTTTGTTTAACCAAGTTTGCT 59.934 36.000 12.74 0.00 31.54 3.91
2487 7340 7.861629 TCTTGATGTATTACTGGACCTTTGAT 58.138 34.615 0.00 0.00 0.00 2.57
2547 7400 5.372343 AGTTCACCAGGATGTATGCATAA 57.628 39.130 8.28 0.00 35.07 1.90
2571 7424 3.366121 CGCATTGTACTTGACAGAGTGAG 59.634 47.826 0.00 0.00 39.88 3.51
2587 7440 5.200454 GCAGTAATCTGTTATGTCGCATTG 58.800 41.667 0.00 0.00 43.05 2.82
2601 7454 7.141758 TCTCCTATTTGGATTGCAGTAATCT 57.858 36.000 10.68 0.00 45.16 2.40
2680 7537 5.106277 CCTGCATATGTGGAGATAATTGCTG 60.106 44.000 12.62 0.00 45.73 4.41
2687 7544 5.781818 TGAGATTCCTGCATATGTGGAGATA 59.218 40.000 12.62 0.42 45.73 1.98
2733 7604 2.289945 ACATCTCTGCCAGTTTGGAGTC 60.290 50.000 0.00 0.00 40.96 3.36
2760 7631 8.306680 TGAAGTTCTATTTCCTAAGACAAACG 57.693 34.615 4.17 0.00 0.00 3.60
2795 7666 1.239296 GCAGCAGCTCATGGTCAACA 61.239 55.000 0.00 0.00 37.60 3.33
2883 7757 9.932207 TTTGATGATGTTGATTGCTTTATCTTT 57.068 25.926 0.00 0.00 0.00 2.52
2921 7795 9.897744 CTTATTTTCTTACAGCATTTTCAGTCA 57.102 29.630 0.00 0.00 0.00 3.41
2961 7835 0.625849 CCCTTACTGCCACTGGGATT 59.374 55.000 0.00 0.00 40.23 3.01
2979 7853 7.056844 AGTTCATTTAGCAGTATCTAGGACC 57.943 40.000 0.00 0.00 0.00 4.46
3022 7901 9.817809 GGATGTCATGTCTCTATGTTTACTAAA 57.182 33.333 0.00 0.00 0.00 1.85
3033 7912 7.785028 AGGTAATTGTAGGATGTCATGTCTCTA 59.215 37.037 0.00 0.00 0.00 2.43
3093 7987 4.502105 AATTGGCTTTGTCCAGGTTTTT 57.498 36.364 0.00 0.00 37.44 1.94
3131 8025 7.771927 AATGGAAATCACTCTTGATCAACTT 57.228 32.000 3.38 0.00 42.00 2.66
3163 8057 2.101125 CAAGCGACGTTCAAAAGTGTG 58.899 47.619 0.00 0.00 0.00 3.82
3224 8118 4.330074 GCAGCGAAGTCAAAAGAGCTTATA 59.670 41.667 0.00 0.00 32.05 0.98
3263 8157 4.153986 CACAGAAGTCATCAATCAAACGC 58.846 43.478 0.00 0.00 0.00 4.84
3495 8391 0.036765 TAACAGCTGCCTAACACCGG 60.037 55.000 15.27 0.00 0.00 5.28
3499 8395 2.091541 GCCAATAACAGCTGCCTAACA 58.908 47.619 15.27 0.00 0.00 2.41
3506 8402 4.644103 AAGCTAATGCCAATAACAGCTG 57.356 40.909 13.48 13.48 39.22 4.24
3516 8445 4.015764 TGTGAGCAAATAAGCTAATGCCA 58.984 39.130 8.72 5.25 46.75 4.92
3528 8457 2.358898 GTGTGTTCCACTGTGAGCAAAT 59.641 45.455 9.86 0.00 41.11 2.32
3564 8501 4.280174 GGATCAAACCCCATCAGATCAATG 59.720 45.833 0.00 0.00 37.44 2.82
3598 8543 6.573664 TGTATCACAATTTCCCAAGAACTG 57.426 37.500 0.00 0.00 0.00 3.16
3874 9158 1.881973 GGCTTGCACTCTTTGACATGA 59.118 47.619 0.00 0.00 0.00 3.07
3879 9163 1.597742 GACAGGCTTGCACTCTTTGA 58.402 50.000 0.00 0.00 0.00 2.69
3890 9176 2.092753 ACGATCATTGATGGACAGGCTT 60.093 45.455 14.66 0.00 0.00 4.35
3898 9187 2.558378 AGCACAGACGATCATTGATGG 58.442 47.619 3.32 5.45 0.00 3.51
3954 9255 6.262601 GTGTAAACTTTGCACTGAAAGCTAA 58.737 36.000 13.71 0.00 42.10 3.09
3977 9278 0.763035 AGGGTTAGGAACTTGCACGT 59.237 50.000 0.00 0.00 41.75 4.49
4007 9380 4.039004 ACATTTCTGGCAGCAATGTAAACA 59.961 37.500 33.83 2.55 39.61 2.83
4022 9396 0.957395 AGCACGGCAGGACATTTCTG 60.957 55.000 0.00 0.00 35.49 3.02
4036 9410 6.427150 ACAAGAACTAATTAACACAAGCACG 58.573 36.000 0.00 0.00 0.00 5.34
4315 9703 6.345298 TGAAAACACAGAGACAGTACAATCA 58.655 36.000 0.00 0.00 0.00 2.57
4348 9736 8.035394 AGAGAACGACAAGCAAATAAATAGAGA 58.965 33.333 0.00 0.00 0.00 3.10
4415 9803 2.415825 CTGGGCCAGATCAGCATTG 58.584 57.895 29.96 0.00 32.44 2.82
4443 9831 2.751806 CAGAGCAGGAATCTGAAAACCC 59.248 50.000 0.00 0.00 45.80 4.11
4530 9923 2.035530 GCCTGATGCTTCTTACAGCT 57.964 50.000 0.88 0.00 40.79 4.24
4717 10122 5.830799 ATCATGATCCTGCTACATGGTTA 57.169 39.130 1.18 0.00 40.86 2.85
4718 10123 4.719026 ATCATGATCCTGCTACATGGTT 57.281 40.909 1.18 0.00 40.86 3.67
4720 10125 6.213677 CAAAAATCATGATCCTGCTACATGG 58.786 40.000 9.06 0.00 40.86 3.66
4721 10126 5.690409 GCAAAAATCATGATCCTGCTACATG 59.310 40.000 20.91 0.00 41.55 3.21
4722 10127 5.597182 AGCAAAAATCATGATCCTGCTACAT 59.403 36.000 25.87 11.35 0.00 2.29
4723 10128 4.951715 AGCAAAAATCATGATCCTGCTACA 59.048 37.500 25.87 0.00 0.00 2.74
4726 10131 4.710375 AGAAGCAAAAATCATGATCCTGCT 59.290 37.500 23.41 23.41 0.00 4.24
4727 10132 5.007385 AGAAGCAAAAATCATGATCCTGC 57.993 39.130 20.75 20.75 0.00 4.85
4751 10156 9.898152 TGGAGTATGTTCATGAATACAATTACA 57.102 29.630 12.12 3.11 32.69 2.41
4754 10159 9.857656 AGATGGAGTATGTTCATGAATACAATT 57.142 29.630 12.12 0.00 32.69 2.32
4755 10160 9.857656 AAGATGGAGTATGTTCATGAATACAAT 57.142 29.630 12.12 0.00 32.69 2.71
4756 10161 9.112725 CAAGATGGAGTATGTTCATGAATACAA 57.887 33.333 12.12 0.00 32.69 2.41
4778 10210 3.307975 CCTCTCCAGAGAATTTGCCAAGA 60.308 47.826 5.08 0.00 44.74 3.02
4801 10233 7.255139 GCAATCTTCAGTGGTTGTTAGTTACTT 60.255 37.037 0.00 0.00 0.00 2.24
4802 10234 6.204882 GCAATCTTCAGTGGTTGTTAGTTACT 59.795 38.462 0.00 0.00 0.00 2.24
4803 10235 6.371389 GCAATCTTCAGTGGTTGTTAGTTAC 58.629 40.000 0.00 0.00 0.00 2.50
4804 10236 5.472137 GGCAATCTTCAGTGGTTGTTAGTTA 59.528 40.000 0.00 0.00 0.00 2.24
4807 10239 3.120199 CGGCAATCTTCAGTGGTTGTTAG 60.120 47.826 0.00 0.00 0.00 2.34
4814 10246 1.798735 CAGCGGCAATCTTCAGTGG 59.201 57.895 1.45 0.00 0.00 4.00
4866 10299 9.109393 GTTCAGATAGCCTAAATGTCATTACAA 57.891 33.333 0.00 0.00 39.58 2.41
4883 10316 3.075866 GGTAACCGTCGGTTCAGATAG 57.924 52.381 32.02 0.00 43.05 2.08
4902 10335 2.273449 CCCTAGGCTGCAACAGGG 59.727 66.667 15.33 15.33 41.83 4.45
4955 10388 2.083774 CCGCTCTTGGTTTTATCAGCA 58.916 47.619 0.00 0.00 0.00 4.41
4979 10412 3.254024 ATGCCTCCACACCACCGTC 62.254 63.158 0.00 0.00 0.00 4.79
4980 10413 3.249189 ATGCCTCCACACCACCGT 61.249 61.111 0.00 0.00 0.00 4.83
4981 10414 2.436646 GATGCCTCCACACCACCG 60.437 66.667 0.00 0.00 0.00 4.94
4982 10415 1.377725 CTGATGCCTCCACACCACC 60.378 63.158 0.00 0.00 0.00 4.61
4983 10416 1.377725 CCTGATGCCTCCACACCAC 60.378 63.158 0.00 0.00 0.00 4.16
4984 10417 1.426251 AACCTGATGCCTCCACACCA 61.426 55.000 0.00 0.00 0.00 4.17
4985 10418 0.251341 AAACCTGATGCCTCCACACC 60.251 55.000 0.00 0.00 0.00 4.16
4986 10419 1.168714 GAAACCTGATGCCTCCACAC 58.831 55.000 0.00 0.00 0.00 3.82
4987 10420 0.038166 GGAAACCTGATGCCTCCACA 59.962 55.000 0.00 0.00 0.00 4.17
4988 10421 2.873797 GGAAACCTGATGCCTCCAC 58.126 57.895 0.00 0.00 0.00 4.02
5007 10440 0.610232 CAAGCTTCCCACTCCCTTGG 60.610 60.000 0.00 0.00 36.26 3.61
5008 10441 0.610232 CCAAGCTTCCCACTCCCTTG 60.610 60.000 0.00 0.00 34.26 3.61
5009 10442 1.770324 CCAAGCTTCCCACTCCCTT 59.230 57.895 0.00 0.00 0.00 3.95
5010 10443 2.234296 CCCAAGCTTCCCACTCCCT 61.234 63.158 0.00 0.00 0.00 4.20
5011 10444 2.356667 CCCAAGCTTCCCACTCCC 59.643 66.667 0.00 0.00 0.00 4.30
5012 10445 2.361737 GCCCAAGCTTCCCACTCC 60.362 66.667 0.00 0.00 35.50 3.85
5013 10446 0.827507 TTTGCCCAAGCTTCCCACTC 60.828 55.000 0.00 0.00 40.80 3.51
5014 10447 0.178924 ATTTGCCCAAGCTTCCCACT 60.179 50.000 0.00 0.00 40.80 4.00
5015 10448 0.037046 CATTTGCCCAAGCTTCCCAC 60.037 55.000 0.00 0.00 40.80 4.61
5016 10449 0.471591 ACATTTGCCCAAGCTTCCCA 60.472 50.000 0.00 0.00 40.80 4.37
5017 10450 0.247460 GACATTTGCCCAAGCTTCCC 59.753 55.000 0.00 0.00 40.80 3.97
5018 10451 0.968405 TGACATTTGCCCAAGCTTCC 59.032 50.000 0.00 0.00 40.80 3.46
5019 10452 2.028748 ACATGACATTTGCCCAAGCTTC 60.029 45.455 0.00 0.00 40.80 3.86
5020 10453 1.972795 ACATGACATTTGCCCAAGCTT 59.027 42.857 0.00 0.00 40.80 3.74
5021 10454 1.547372 GACATGACATTTGCCCAAGCT 59.453 47.619 0.00 0.00 40.80 3.74
5022 10455 1.733389 CGACATGACATTTGCCCAAGC 60.733 52.381 0.00 0.00 40.48 4.01
5023 10456 1.811965 TCGACATGACATTTGCCCAAG 59.188 47.619 0.00 0.00 0.00 3.61
5024 10457 1.902938 TCGACATGACATTTGCCCAA 58.097 45.000 0.00 0.00 0.00 4.12
5025 10458 3.641017 TCGACATGACATTTGCCCA 57.359 47.368 0.00 0.00 0.00 5.36
5034 10467 2.345641 CGATTGAACCAGTCGACATGAC 59.654 50.000 19.50 5.65 44.29 3.06
5035 10468 2.029380 ACGATTGAACCAGTCGACATGA 60.029 45.455 19.50 0.00 44.29 3.07
5036 10469 2.337583 ACGATTGAACCAGTCGACATG 58.662 47.619 19.50 12.61 44.29 3.21
5037 10470 2.607187 GACGATTGAACCAGTCGACAT 58.393 47.619 19.50 0.00 44.29 3.06
5038 10471 1.336517 GGACGATTGAACCAGTCGACA 60.337 52.381 19.50 0.00 44.29 4.35
5039 10472 1.347320 GGACGATTGAACCAGTCGAC 58.653 55.000 16.56 7.70 44.29 4.20
5040 10473 0.245539 GGGACGATTGAACCAGTCGA 59.754 55.000 16.56 0.00 44.29 4.20
5041 10474 0.739813 GGGGACGATTGAACCAGTCG 60.740 60.000 9.70 9.70 46.30 4.18
5042 10475 0.613777 AGGGGACGATTGAACCAGTC 59.386 55.000 0.00 0.00 0.00 3.51
5043 10476 0.613777 GAGGGGACGATTGAACCAGT 59.386 55.000 0.00 0.00 0.00 4.00
5044 10477 0.460284 CGAGGGGACGATTGAACCAG 60.460 60.000 0.00 0.00 35.09 4.00
5045 10478 0.901114 TCGAGGGGACGATTGAACCA 60.901 55.000 0.00 0.00 37.37 3.67
5046 10479 0.179108 CTCGAGGGGACGATTGAACC 60.179 60.000 3.91 0.00 41.39 3.62
5047 10480 0.179108 CCTCGAGGGGACGATTGAAC 60.179 60.000 24.62 0.00 41.39 3.18
5048 10481 2.199117 CCTCGAGGGGACGATTGAA 58.801 57.895 24.62 0.00 41.39 2.69
5049 10482 3.935024 CCTCGAGGGGACGATTGA 58.065 61.111 24.62 0.00 41.39 2.57
5059 10492 0.460987 GCAATGTGACTCCCTCGAGG 60.461 60.000 25.36 25.36 40.77 4.63
5060 10493 0.460987 GGCAATGTGACTCCCTCGAG 60.461 60.000 5.13 5.13 42.32 4.04
5061 10494 1.596934 GGCAATGTGACTCCCTCGA 59.403 57.895 0.00 0.00 0.00 4.04
5062 10495 1.811266 CGGCAATGTGACTCCCTCG 60.811 63.158 0.00 0.00 0.00 4.63
5063 10496 2.109126 GCGGCAATGTGACTCCCTC 61.109 63.158 0.00 0.00 0.00 4.30
5064 10497 2.045926 GCGGCAATGTGACTCCCT 60.046 61.111 0.00 0.00 0.00 4.20
5065 10498 3.499737 CGCGGCAATGTGACTCCC 61.500 66.667 0.00 0.00 0.00 4.30
5066 10499 3.499737 CCGCGGCAATGTGACTCC 61.500 66.667 14.67 0.00 0.00 3.85
5067 10500 4.166011 GCCGCGGCAATGTGACTC 62.166 66.667 43.55 11.09 41.49 3.36
5077 10510 1.009675 CATAACATTCAGCCGCGGC 60.010 57.895 42.34 42.34 42.33 6.53
5078 10511 0.583438 CTCATAACATTCAGCCGCGG 59.417 55.000 24.05 24.05 0.00 6.46
5079 10512 1.570813 TCTCATAACATTCAGCCGCG 58.429 50.000 0.00 0.00 0.00 6.46
5080 10513 2.286654 GCTTCTCATAACATTCAGCCGC 60.287 50.000 0.00 0.00 0.00 6.53
5081 10514 2.938451 TGCTTCTCATAACATTCAGCCG 59.062 45.455 0.00 0.00 0.00 5.52
5082 10515 4.194640 TCTGCTTCTCATAACATTCAGCC 58.805 43.478 0.00 0.00 0.00 4.85
5083 10516 5.808042 TTCTGCTTCTCATAACATTCAGC 57.192 39.130 0.00 0.00 0.00 4.26
5084 10517 7.639072 CGAAATTCTGCTTCTCATAACATTCAG 59.361 37.037 0.00 0.00 0.00 3.02
5085 10518 7.119699 ACGAAATTCTGCTTCTCATAACATTCA 59.880 33.333 0.00 0.00 0.00 2.57
5086 10519 7.427606 CACGAAATTCTGCTTCTCATAACATTC 59.572 37.037 0.00 0.00 0.00 2.67
5087 10520 7.246311 CACGAAATTCTGCTTCTCATAACATT 58.754 34.615 0.00 0.00 0.00 2.71
5088 10521 6.183360 CCACGAAATTCTGCTTCTCATAACAT 60.183 38.462 0.00 0.00 0.00 2.71
5089 10522 5.122239 CCACGAAATTCTGCTTCTCATAACA 59.878 40.000 0.00 0.00 0.00 2.41
5090 10523 5.351465 TCCACGAAATTCTGCTTCTCATAAC 59.649 40.000 0.00 0.00 0.00 1.89
5091 10524 5.487433 TCCACGAAATTCTGCTTCTCATAA 58.513 37.500 0.00 0.00 0.00 1.90
5092 10525 5.084818 TCCACGAAATTCTGCTTCTCATA 57.915 39.130 0.00 0.00 0.00 2.15
5093 10526 3.942829 TCCACGAAATTCTGCTTCTCAT 58.057 40.909 0.00 0.00 0.00 2.90
5094 10527 3.401033 TCCACGAAATTCTGCTTCTCA 57.599 42.857 0.00 0.00 0.00 3.27
5095 10528 3.486542 GCATCCACGAAATTCTGCTTCTC 60.487 47.826 0.00 0.00 0.00 2.87
5096 10529 2.421424 GCATCCACGAAATTCTGCTTCT 59.579 45.455 0.00 0.00 0.00 2.85
5097 10530 2.162208 TGCATCCACGAAATTCTGCTTC 59.838 45.455 5.89 0.00 0.00 3.86
5098 10531 2.161855 TGCATCCACGAAATTCTGCTT 58.838 42.857 5.89 0.00 0.00 3.91
5099 10532 1.741706 CTGCATCCACGAAATTCTGCT 59.258 47.619 5.89 0.00 0.00 4.24
5100 10533 1.470098 ACTGCATCCACGAAATTCTGC 59.530 47.619 0.00 0.00 0.00 4.26
5101 10534 3.837213 AACTGCATCCACGAAATTCTG 57.163 42.857 0.00 0.00 0.00 3.02
5102 10535 4.278170 TGAAAACTGCATCCACGAAATTCT 59.722 37.500 0.00 0.00 0.00 2.40
5103 10536 4.545610 TGAAAACTGCATCCACGAAATTC 58.454 39.130 0.00 0.00 0.00 2.17
5104 10537 4.549458 CTGAAAACTGCATCCACGAAATT 58.451 39.130 0.00 0.00 0.00 1.82
5105 10538 3.612479 GCTGAAAACTGCATCCACGAAAT 60.612 43.478 0.00 0.00 0.00 2.17
5106 10539 2.287547 GCTGAAAACTGCATCCACGAAA 60.288 45.455 0.00 0.00 0.00 3.46
5107 10540 1.266718 GCTGAAAACTGCATCCACGAA 59.733 47.619 0.00 0.00 0.00 3.85
5108 10541 0.874390 GCTGAAAACTGCATCCACGA 59.126 50.000 0.00 0.00 0.00 4.35
5109 10542 0.877071 AGCTGAAAACTGCATCCACG 59.123 50.000 0.00 0.00 0.00 4.94
5110 10543 2.342910 CAGCTGAAAACTGCATCCAC 57.657 50.000 8.42 0.00 0.00 4.02
5117 10550 1.208614 GCCGAGCAGCTGAAAACTG 59.791 57.895 20.43 0.73 38.22 3.16
5118 10551 2.320587 CGCCGAGCAGCTGAAAACT 61.321 57.895 20.43 4.25 0.00 2.66
5119 10552 1.639298 ATCGCCGAGCAGCTGAAAAC 61.639 55.000 20.43 0.00 0.00 2.43
5120 10553 0.955428 AATCGCCGAGCAGCTGAAAA 60.955 50.000 20.43 0.00 0.00 2.29
5121 10554 0.955428 AAATCGCCGAGCAGCTGAAA 60.955 50.000 20.43 0.00 0.00 2.69
5122 10555 0.955428 AAAATCGCCGAGCAGCTGAA 60.955 50.000 20.43 0.00 0.00 3.02
5123 10556 1.375908 AAAATCGCCGAGCAGCTGA 60.376 52.632 20.43 0.00 0.00 4.26
5124 10557 1.226211 CAAAATCGCCGAGCAGCTG 60.226 57.895 10.11 10.11 0.00 4.24
5125 10558 1.672356 ACAAAATCGCCGAGCAGCT 60.672 52.632 0.00 0.00 0.00 4.24
5126 10559 1.512734 CACAAAATCGCCGAGCAGC 60.513 57.895 0.00 0.00 0.00 5.25
5127 10560 1.512734 GCACAAAATCGCCGAGCAG 60.513 57.895 0.00 0.00 0.00 4.24
5128 10561 1.965930 AGCACAAAATCGCCGAGCA 60.966 52.632 0.00 0.00 0.00 4.26
5129 10562 1.512734 CAGCACAAAATCGCCGAGC 60.513 57.895 0.00 0.00 0.00 5.03
5130 10563 1.135315 CCAGCACAAAATCGCCGAG 59.865 57.895 0.00 0.00 0.00 4.63
5131 10564 1.298157 CTCCAGCACAAAATCGCCGA 61.298 55.000 0.00 0.00 0.00 5.54
5132 10565 1.135315 CTCCAGCACAAAATCGCCG 59.865 57.895 0.00 0.00 0.00 6.46
5133 10566 1.244019 ACCTCCAGCACAAAATCGCC 61.244 55.000 0.00 0.00 0.00 5.54
5134 10567 0.109597 CACCTCCAGCACAAAATCGC 60.110 55.000 0.00 0.00 0.00 4.58
5135 10568 1.522668 TCACCTCCAGCACAAAATCG 58.477 50.000 0.00 0.00 0.00 3.34
5136 10569 3.350833 AGATCACCTCCAGCACAAAATC 58.649 45.455 0.00 0.00 0.00 2.17
5137 10570 3.009916 AGAGATCACCTCCAGCACAAAAT 59.990 43.478 0.00 0.00 42.97 1.82
5138 10571 2.373169 AGAGATCACCTCCAGCACAAAA 59.627 45.455 0.00 0.00 42.97 2.44
5139 10572 1.980765 AGAGATCACCTCCAGCACAAA 59.019 47.619 0.00 0.00 42.97 2.83
5140 10573 1.277273 CAGAGATCACCTCCAGCACAA 59.723 52.381 0.00 0.00 42.97 3.33
5141 10574 0.900421 CAGAGATCACCTCCAGCACA 59.100 55.000 0.00 0.00 42.97 4.57
5142 10575 1.189752 TCAGAGATCACCTCCAGCAC 58.810 55.000 0.00 0.00 42.97 4.40
5143 10576 2.037901 GATCAGAGATCACCTCCAGCA 58.962 52.381 0.00 0.00 42.97 4.41
5144 10577 1.344114 GGATCAGAGATCACCTCCAGC 59.656 57.143 9.02 0.00 42.97 4.85
5145 10578 1.969923 GGGATCAGAGATCACCTCCAG 59.030 57.143 9.02 0.00 42.97 3.86
5146 10579 1.755621 CGGGATCAGAGATCACCTCCA 60.756 57.143 9.02 0.00 42.97 3.86
5147 10580 0.965439 CGGGATCAGAGATCACCTCC 59.035 60.000 9.02 0.00 42.97 4.30
5148 10581 0.965439 CCGGGATCAGAGATCACCTC 59.035 60.000 9.02 0.00 42.28 3.85
5149 10582 0.558220 TCCGGGATCAGAGATCACCT 59.442 55.000 0.00 0.00 0.00 4.00
5150 10583 1.638529 ATCCGGGATCAGAGATCACC 58.361 55.000 2.97 6.83 0.00 4.02
5151 10584 3.181461 ACAAATCCGGGATCAGAGATCAC 60.181 47.826 10.56 4.40 0.00 3.06
5152 10585 3.041211 ACAAATCCGGGATCAGAGATCA 58.959 45.455 10.56 0.00 0.00 2.92
5153 10586 3.397482 CACAAATCCGGGATCAGAGATC 58.603 50.000 10.56 0.00 0.00 2.75
5154 10587 2.486191 GCACAAATCCGGGATCAGAGAT 60.486 50.000 10.56 0.00 0.00 2.75
5155 10588 1.134401 GCACAAATCCGGGATCAGAGA 60.134 52.381 10.56 0.00 0.00 3.10
5156 10589 1.134280 AGCACAAATCCGGGATCAGAG 60.134 52.381 10.56 5.93 0.00 3.35
5157 10590 0.911769 AGCACAAATCCGGGATCAGA 59.088 50.000 10.56 0.00 0.00 3.27
5158 10591 1.303309 GAGCACAAATCCGGGATCAG 58.697 55.000 10.56 8.45 0.00 2.90
5159 10592 0.107214 GGAGCACAAATCCGGGATCA 60.107 55.000 10.56 0.00 0.00 2.92
5160 10593 0.107214 TGGAGCACAAATCCGGGATC 60.107 55.000 10.56 0.00 39.91 3.36
5161 10594 0.394352 GTGGAGCACAAATCCGGGAT 60.394 55.000 2.97 2.97 39.91 3.85
5162 10595 1.002624 GTGGAGCACAAATCCGGGA 60.003 57.895 0.00 0.00 39.91 5.14
5163 10596 2.398554 CGTGGAGCACAAATCCGGG 61.399 63.158 0.00 0.00 39.91 5.73
5164 10597 2.398554 CCGTGGAGCACAAATCCGG 61.399 63.158 0.00 0.00 39.91 5.14
5165 10598 1.361668 CTCCGTGGAGCACAAATCCG 61.362 60.000 2.38 0.00 39.91 4.18
5166 10599 2.471255 CTCCGTGGAGCACAAATCC 58.529 57.895 2.38 0.00 35.31 3.01
5178 10611 4.767255 GAGTGGGCCAGCTCCGTG 62.767 72.222 6.40 0.00 0.00 4.94
5182 10615 3.959991 GAACCGAGTGGGCCAGCTC 62.960 68.421 6.40 15.74 40.62 4.09
5183 10616 4.021925 GAACCGAGTGGGCCAGCT 62.022 66.667 6.40 7.50 40.62 4.24
5184 10617 4.329545 TGAACCGAGTGGGCCAGC 62.330 66.667 6.40 0.23 40.62 4.85
5185 10618 2.358737 GTGAACCGAGTGGGCCAG 60.359 66.667 6.40 0.00 40.62 4.85
5186 10619 3.948719 GGTGAACCGAGTGGGCCA 61.949 66.667 0.00 0.00 40.62 5.36
5196 10629 1.509923 CGACTCCTACCGGTGAACC 59.490 63.158 19.93 0.20 0.00 3.62
5197 10630 1.153881 GCGACTCCTACCGGTGAAC 60.154 63.158 19.93 3.23 0.00 3.18
5198 10631 2.345760 GGCGACTCCTACCGGTGAA 61.346 63.158 19.93 0.00 0.00 3.18
5199 10632 2.753043 GGCGACTCCTACCGGTGA 60.753 66.667 19.93 5.80 0.00 4.02
5200 10633 4.189188 CGGCGACTCCTACCGGTG 62.189 72.222 19.93 7.24 43.23 4.94
5203 10636 3.584052 CTCCGGCGACTCCTACCG 61.584 72.222 9.30 0.00 46.50 4.02
5204 10637 3.217743 CCTCCGGCGACTCCTACC 61.218 72.222 9.30 0.00 0.00 3.18
5205 10638 2.124403 TCCTCCGGCGACTCCTAC 60.124 66.667 9.30 0.00 0.00 3.18
5206 10639 2.192443 CTCCTCCGGCGACTCCTA 59.808 66.667 9.30 0.00 0.00 2.94
5209 10642 3.894947 GAGCTCCTCCGGCGACTC 61.895 72.222 9.30 1.27 34.52 3.36
5234 10667 1.039785 GGGCCCATTTTGGAGCTCTC 61.040 60.000 19.95 4.40 40.96 3.20
5235 10668 1.000866 GGGCCCATTTTGGAGCTCT 59.999 57.895 19.95 0.00 40.96 4.09
5236 10669 0.615827 AAGGGCCCATTTTGGAGCTC 60.616 55.000 27.56 4.71 40.96 4.09
5237 10670 0.709992 TAAGGGCCCATTTTGGAGCT 59.290 50.000 27.56 0.00 40.96 4.09
5238 10671 1.207089 GTTAAGGGCCCATTTTGGAGC 59.793 52.381 27.56 0.00 40.96 4.70
5239 10672 1.831106 GGTTAAGGGCCCATTTTGGAG 59.169 52.381 27.56 0.00 40.96 3.86
5240 10673 1.150135 TGGTTAAGGGCCCATTTTGGA 59.850 47.619 27.56 0.00 40.96 3.53
5241 10674 1.650528 TGGTTAAGGGCCCATTTTGG 58.349 50.000 27.56 0.00 37.25 3.28
5242 10675 3.673902 CTTTGGTTAAGGGCCCATTTTG 58.326 45.455 27.56 0.34 0.00 2.44
5243 10676 2.039746 GCTTTGGTTAAGGGCCCATTTT 59.960 45.455 27.56 12.81 34.26 1.82
5244 10677 1.628340 GCTTTGGTTAAGGGCCCATTT 59.372 47.619 27.56 13.67 34.26 2.32
5245 10678 1.203300 AGCTTTGGTTAAGGGCCCATT 60.203 47.619 27.56 17.66 34.26 3.16
5246 10679 0.413434 AGCTTTGGTTAAGGGCCCAT 59.587 50.000 27.56 16.50 34.26 4.00
5247 10680 0.251608 GAGCTTTGGTTAAGGGCCCA 60.252 55.000 27.56 0.00 34.26 5.36
5248 10681 0.970937 GGAGCTTTGGTTAAGGGCCC 60.971 60.000 16.46 16.46 34.26 5.80
5249 10682 0.970937 GGGAGCTTTGGTTAAGGGCC 60.971 60.000 0.00 0.00 34.26 5.80
5250 10683 0.251608 TGGGAGCTTTGGTTAAGGGC 60.252 55.000 0.00 0.00 34.26 5.19
5251 10684 1.839424 CTGGGAGCTTTGGTTAAGGG 58.161 55.000 0.00 0.00 34.26 3.95
5252 10685 1.177401 GCTGGGAGCTTTGGTTAAGG 58.823 55.000 0.00 0.00 38.45 2.69
5253 10686 1.541588 GTGCTGGGAGCTTTGGTTAAG 59.458 52.381 0.00 0.00 42.97 1.85
5254 10687 1.144913 AGTGCTGGGAGCTTTGGTTAA 59.855 47.619 0.00 0.00 42.97 2.01
5255 10688 0.771127 AGTGCTGGGAGCTTTGGTTA 59.229 50.000 0.00 0.00 42.97 2.85
5256 10689 0.771127 TAGTGCTGGGAGCTTTGGTT 59.229 50.000 0.00 0.00 42.97 3.67
5257 10690 0.995024 ATAGTGCTGGGAGCTTTGGT 59.005 50.000 0.00 0.00 42.97 3.67
5258 10691 1.065199 TGATAGTGCTGGGAGCTTTGG 60.065 52.381 0.00 0.00 42.97 3.28
5259 10692 2.408271 TGATAGTGCTGGGAGCTTTG 57.592 50.000 0.00 0.00 42.97 2.77
5260 10693 2.307098 AGTTGATAGTGCTGGGAGCTTT 59.693 45.455 0.00 0.00 42.97 3.51
5261 10694 1.912043 AGTTGATAGTGCTGGGAGCTT 59.088 47.619 0.00 0.00 42.97 3.74
5262 10695 1.577736 AGTTGATAGTGCTGGGAGCT 58.422 50.000 0.00 0.00 42.97 4.09
5263 10696 2.409948 AAGTTGATAGTGCTGGGAGC 57.590 50.000 0.00 0.00 42.82 4.70
5264 10697 3.181461 CCCTAAGTTGATAGTGCTGGGAG 60.181 52.174 0.00 0.00 34.34 4.30
5265 10698 2.771943 CCCTAAGTTGATAGTGCTGGGA 59.228 50.000 0.00 0.00 34.34 4.37
5266 10699 2.746472 GCCCTAAGTTGATAGTGCTGGG 60.746 54.545 0.00 0.00 35.47 4.45
5267 10700 2.092968 TGCCCTAAGTTGATAGTGCTGG 60.093 50.000 0.00 0.00 29.04 4.85
5268 10701 3.266510 TGCCCTAAGTTGATAGTGCTG 57.733 47.619 0.00 0.00 29.04 4.41
5269 10702 3.713764 AGATGCCCTAAGTTGATAGTGCT 59.286 43.478 0.00 0.00 29.04 4.40
5270 10703 4.061596 GAGATGCCCTAAGTTGATAGTGC 58.938 47.826 0.00 0.00 0.00 4.40
5271 10704 4.101585 TGGAGATGCCCTAAGTTGATAGTG 59.898 45.833 0.00 0.00 34.97 2.74
5272 10705 4.298626 TGGAGATGCCCTAAGTTGATAGT 58.701 43.478 0.00 0.00 34.97 2.12
5273 10706 4.963318 TGGAGATGCCCTAAGTTGATAG 57.037 45.455 0.00 0.00 34.97 2.08
5274 10707 4.442893 CGTTGGAGATGCCCTAAGTTGATA 60.443 45.833 0.00 0.00 34.97 2.15
5275 10708 3.682718 CGTTGGAGATGCCCTAAGTTGAT 60.683 47.826 0.00 0.00 34.97 2.57
5276 10709 2.354704 CGTTGGAGATGCCCTAAGTTGA 60.355 50.000 0.00 0.00 34.97 3.18
5277 10710 2.009774 CGTTGGAGATGCCCTAAGTTG 58.990 52.381 0.00 0.00 34.97 3.16
5278 10711 1.065418 CCGTTGGAGATGCCCTAAGTT 60.065 52.381 0.00 0.00 34.97 2.66
5279 10712 0.541863 CCGTTGGAGATGCCCTAAGT 59.458 55.000 0.00 0.00 34.97 2.24
5280 10713 0.815615 GCCGTTGGAGATGCCCTAAG 60.816 60.000 0.00 0.00 34.97 2.18
5281 10714 1.223487 GCCGTTGGAGATGCCCTAA 59.777 57.895 0.00 0.00 34.97 2.69
5282 10715 1.558167 TTGCCGTTGGAGATGCCCTA 61.558 55.000 0.00 0.00 34.97 3.53
5283 10716 2.215451 ATTGCCGTTGGAGATGCCCT 62.215 55.000 0.00 0.00 34.97 5.19
5284 10717 1.728490 GATTGCCGTTGGAGATGCCC 61.728 60.000 0.00 0.00 34.97 5.36
5285 10718 0.749454 AGATTGCCGTTGGAGATGCC 60.749 55.000 0.00 0.00 37.10 4.40
5286 10719 0.379669 CAGATTGCCGTTGGAGATGC 59.620 55.000 0.00 0.00 0.00 3.91
5287 10720 0.379669 GCAGATTGCCGTTGGAGATG 59.620 55.000 0.00 0.00 37.42 2.90
5288 10721 0.035152 TGCAGATTGCCGTTGGAGAT 60.035 50.000 0.00 0.00 44.23 2.75
5289 10722 0.250684 TTGCAGATTGCCGTTGGAGA 60.251 50.000 0.00 0.00 44.23 3.71
5290 10723 0.597568 TTTGCAGATTGCCGTTGGAG 59.402 50.000 0.00 0.00 44.23 3.86
5291 10724 1.035923 TTTTGCAGATTGCCGTTGGA 58.964 45.000 0.00 0.00 44.23 3.53
5292 10725 1.863267 TTTTTGCAGATTGCCGTTGG 58.137 45.000 0.00 0.00 44.23 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.