Multiple sequence alignment - TraesCS6D01G349900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G349900 chr6D 100.000 3140 0 0 1 3140 447817359 447820498 0.000000e+00 5799.0
1 TraesCS6D01G349900 chr5D 95.434 2234 77 9 916 3140 114472054 114469837 0.000000e+00 3537.0
2 TraesCS6D01G349900 chr5D 91.190 2236 107 26 916 3140 398263325 398261169 0.000000e+00 2955.0
3 TraesCS6D01G349900 chr5D 88.298 2538 178 56 653 3140 274114123 274116591 0.000000e+00 2931.0
4 TraesCS6D01G349900 chr5D 90.689 2234 132 43 916 3140 408555040 408552874 0.000000e+00 2904.0
5 TraesCS6D01G349900 chr5D 87.980 2005 156 35 657 2624 382518084 382520040 0.000000e+00 2289.0
6 TraesCS6D01G349900 chr5D 92.627 217 14 1 653 867 398256108 398256324 8.460000e-81 311.0
7 TraesCS6D01G349900 chr5D 85.567 291 25 14 656 938 114472345 114472064 3.960000e-74 289.0
8 TraesCS6D01G349900 chr7D 93.272 2408 92 28 773 3140 46570485 46572862 0.000000e+00 3485.0
9 TraesCS6D01G349900 chr7D 90.694 2235 133 41 916 3140 92234247 92232078 0.000000e+00 2905.0
10 TraesCS6D01G349900 chr7D 90.506 2233 137 40 916 3140 631818294 631816129 0.000000e+00 2880.0
11 TraesCS6D01G349900 chr7D 88.364 275 26 6 652 923 93605253 93605524 3.020000e-85 326.0
12 TraesCS6D01G349900 chr7D 86.792 106 13 1 320 424 227404551 227404446 1.980000e-22 117.0
13 TraesCS6D01G349900 chr5A 93.856 2116 94 13 916 3018 574041048 574038956 0.000000e+00 3155.0
14 TraesCS6D01G349900 chr5A 89.870 2537 135 42 656 3140 650150479 650152945 0.000000e+00 3149.0
15 TraesCS6D01G349900 chr5A 94.006 634 30 4 2510 3140 701983787 701983159 0.000000e+00 953.0
16 TraesCS6D01G349900 chr5A 93.396 212 13 1 656 867 647573856 647573646 2.350000e-81 313.0
17 TraesCS6D01G349900 chr5A 86.532 297 25 4 656 938 701985671 701985376 2.350000e-81 313.0
18 TraesCS6D01G349900 chr2A 89.822 2535 140 43 656 3140 769227587 769230053 0.000000e+00 3144.0
19 TraesCS6D01G349900 chr3A 89.748 2536 137 50 651 3140 636533540 636531082 0.000000e+00 3129.0
20 TraesCS6D01G349900 chr3D 89.246 2520 174 50 656 3140 45063223 45060766 0.000000e+00 3062.0
21 TraesCS6D01G349900 chr3D 94.734 1823 70 9 924 2743 575254212 575252413 0.000000e+00 2811.0
22 TraesCS6D01G349900 chr4A 89.200 2537 148 55 656 3140 604389451 604386989 0.000000e+00 3051.0
23 TraesCS6D01G349900 chr4A 81.111 180 31 3 257 434 1523385 1523207 1.170000e-29 141.0
24 TraesCS6D01G349900 chr4A 86.957 115 13 2 319 432 500909367 500909254 9.140000e-26 128.0
25 TraesCS6D01G349900 chr1D 88.955 2526 182 50 652 3140 414451245 414448780 0.000000e+00 3029.0
26 TraesCS6D01G349900 chr1D 92.147 1961 92 22 654 2585 335412169 335414096 0.000000e+00 2712.0
27 TraesCS6D01G349900 chrUn 94.514 1440 77 2 1702 3140 97255836 97257274 0.000000e+00 2220.0
28 TraesCS6D01G349900 chrUn 94.367 1438 73 5 1702 3138 97175492 97176922 0.000000e+00 2200.0
29 TraesCS6D01G349900 chr7A 90.796 1532 70 26 656 2144 637872562 637874065 0.000000e+00 1982.0
30 TraesCS6D01G349900 chr7A 91.384 1474 86 21 654 2099 563240957 563239497 0.000000e+00 1980.0
31 TraesCS6D01G349900 chr7A 94.953 634 24 4 2510 3140 15600323 15599695 0.000000e+00 987.0
32 TraesCS6D01G349900 chr7A 79.888 179 33 3 256 431 30213875 30214053 9.140000e-26 128.0
33 TraesCS6D01G349900 chr7A 75.200 250 45 11 7 254 54966125 54965891 5.540000e-18 102.0
34 TraesCS6D01G349900 chr6B 90.000 1040 50 15 654 1662 40798227 40797211 0.000000e+00 1295.0
35 TraesCS6D01G349900 chr6B 81.481 108 19 1 276 382 581286275 581286168 1.550000e-13 87.9
36 TraesCS6D01G349900 chr1B 88.174 964 65 15 656 1606 557113655 557114582 0.000000e+00 1103.0
37 TraesCS6D01G349900 chr2B 93.952 744 20 6 916 1659 69352294 69353012 0.000000e+00 1101.0
38 TraesCS6D01G349900 chr7B 93.154 745 25 7 916 1659 41047295 41048014 0.000000e+00 1070.0
39 TraesCS6D01G349900 chr3B 94.146 632 31 4 2510 3140 470857484 470858110 0.000000e+00 957.0
40 TraesCS6D01G349900 chr6A 87.162 296 22 10 656 938 56130142 56129850 3.910000e-84 322.0
41 TraesCS6D01G349900 chr6A 79.365 252 36 16 7 254 48045450 48045211 2.510000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G349900 chr6D 447817359 447820498 3139 False 5799 5799 100.0000 1 3140 1 chr6D.!!$F1 3139
1 TraesCS6D01G349900 chr5D 398261169 398263325 2156 True 2955 2955 91.1900 916 3140 1 chr5D.!!$R1 2224
2 TraesCS6D01G349900 chr5D 274114123 274116591 2468 False 2931 2931 88.2980 653 3140 1 chr5D.!!$F1 2487
3 TraesCS6D01G349900 chr5D 408552874 408555040 2166 True 2904 2904 90.6890 916 3140 1 chr5D.!!$R2 2224
4 TraesCS6D01G349900 chr5D 382518084 382520040 1956 False 2289 2289 87.9800 657 2624 1 chr5D.!!$F2 1967
5 TraesCS6D01G349900 chr5D 114469837 114472345 2508 True 1913 3537 90.5005 656 3140 2 chr5D.!!$R3 2484
6 TraesCS6D01G349900 chr7D 46570485 46572862 2377 False 3485 3485 93.2720 773 3140 1 chr7D.!!$F1 2367
7 TraesCS6D01G349900 chr7D 92232078 92234247 2169 True 2905 2905 90.6940 916 3140 1 chr7D.!!$R1 2224
8 TraesCS6D01G349900 chr7D 631816129 631818294 2165 True 2880 2880 90.5060 916 3140 1 chr7D.!!$R3 2224
9 TraesCS6D01G349900 chr5A 574038956 574041048 2092 True 3155 3155 93.8560 916 3018 1 chr5A.!!$R1 2102
10 TraesCS6D01G349900 chr5A 650150479 650152945 2466 False 3149 3149 89.8700 656 3140 1 chr5A.!!$F1 2484
11 TraesCS6D01G349900 chr5A 701983159 701985671 2512 True 633 953 90.2690 656 3140 2 chr5A.!!$R3 2484
12 TraesCS6D01G349900 chr2A 769227587 769230053 2466 False 3144 3144 89.8220 656 3140 1 chr2A.!!$F1 2484
13 TraesCS6D01G349900 chr3A 636531082 636533540 2458 True 3129 3129 89.7480 651 3140 1 chr3A.!!$R1 2489
14 TraesCS6D01G349900 chr3D 45060766 45063223 2457 True 3062 3062 89.2460 656 3140 1 chr3D.!!$R1 2484
15 TraesCS6D01G349900 chr3D 575252413 575254212 1799 True 2811 2811 94.7340 924 2743 1 chr3D.!!$R2 1819
16 TraesCS6D01G349900 chr4A 604386989 604389451 2462 True 3051 3051 89.2000 656 3140 1 chr4A.!!$R3 2484
17 TraesCS6D01G349900 chr1D 414448780 414451245 2465 True 3029 3029 88.9550 652 3140 1 chr1D.!!$R1 2488
18 TraesCS6D01G349900 chr1D 335412169 335414096 1927 False 2712 2712 92.1470 654 2585 1 chr1D.!!$F1 1931
19 TraesCS6D01G349900 chrUn 97255836 97257274 1438 False 2220 2220 94.5140 1702 3140 1 chrUn.!!$F2 1438
20 TraesCS6D01G349900 chrUn 97175492 97176922 1430 False 2200 2200 94.3670 1702 3138 1 chrUn.!!$F1 1436
21 TraesCS6D01G349900 chr7A 637872562 637874065 1503 False 1982 1982 90.7960 656 2144 1 chr7A.!!$F2 1488
22 TraesCS6D01G349900 chr7A 563239497 563240957 1460 True 1980 1980 91.3840 654 2099 1 chr7A.!!$R3 1445
23 TraesCS6D01G349900 chr7A 15599695 15600323 628 True 987 987 94.9530 2510 3140 1 chr7A.!!$R1 630
24 TraesCS6D01G349900 chr6B 40797211 40798227 1016 True 1295 1295 90.0000 654 1662 1 chr6B.!!$R1 1008
25 TraesCS6D01G349900 chr1B 557113655 557114582 927 False 1103 1103 88.1740 656 1606 1 chr1B.!!$F1 950
26 TraesCS6D01G349900 chr2B 69352294 69353012 718 False 1101 1101 93.9520 916 1659 1 chr2B.!!$F1 743
27 TraesCS6D01G349900 chr7B 41047295 41048014 719 False 1070 1070 93.1540 916 1659 1 chr7B.!!$F1 743
28 TraesCS6D01G349900 chr3B 470857484 470858110 626 False 957 957 94.1460 2510 3140 1 chr3B.!!$F1 630

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
549 550 0.036388 ACAACTCCGGCGATGAACAT 60.036 50.0 9.3 0.0 0.0 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2338 2586 1.487976 TCATGACTCAAGGATGGCCTC 59.512 52.381 3.32 0.0 46.28 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.545105 TTCCGTGTGTAGTTTTCTTAAATAGAA 57.455 29.630 0.00 0.00 41.11 2.10
27 28 8.981647 TCCGTGTGTAGTTTTCTTAAATAGAAC 58.018 33.333 0.00 0.00 42.50 3.01
28 29 8.767085 CCGTGTGTAGTTTTCTTAAATAGAACA 58.233 33.333 0.00 0.00 42.50 3.18
49 50 9.772973 AGAACAAGATAAGTAACAACATACACA 57.227 29.630 0.00 0.00 0.00 3.72
52 53 9.719355 ACAAGATAAGTAACAACATACACATGA 57.281 29.630 0.00 0.00 35.96 3.07
68 69 9.624697 CATACACATGAAAATTTATATTCCCCG 57.375 33.333 0.00 0.00 33.67 5.73
69 70 6.512297 ACACATGAAAATTTATATTCCCCGC 58.488 36.000 0.00 0.00 0.00 6.13
70 71 6.097554 ACACATGAAAATTTATATTCCCCGCA 59.902 34.615 0.00 0.00 0.00 5.69
71 72 7.153985 CACATGAAAATTTATATTCCCCGCAT 58.846 34.615 0.00 0.00 0.00 4.73
72 73 7.116662 CACATGAAAATTTATATTCCCCGCATG 59.883 37.037 0.00 0.00 35.60 4.06
73 74 6.968263 TGAAAATTTATATTCCCCGCATGA 57.032 33.333 0.00 0.00 0.00 3.07
74 75 7.353414 TGAAAATTTATATTCCCCGCATGAA 57.647 32.000 0.00 0.00 0.00 2.57
75 76 7.206687 TGAAAATTTATATTCCCCGCATGAAC 58.793 34.615 0.00 0.00 0.00 3.18
76 77 6.976934 AAATTTATATTCCCCGCATGAACT 57.023 33.333 0.00 0.00 0.00 3.01
77 78 6.976934 AATTTATATTCCCCGCATGAACTT 57.023 33.333 0.00 0.00 0.00 2.66
78 79 8.472007 AAATTTATATTCCCCGCATGAACTTA 57.528 30.769 0.00 0.00 0.00 2.24
79 80 8.650143 AATTTATATTCCCCGCATGAACTTAT 57.350 30.769 0.00 0.00 0.00 1.73
80 81 8.650143 ATTTATATTCCCCGCATGAACTTATT 57.350 30.769 0.00 0.00 0.00 1.40
81 82 8.472007 TTTATATTCCCCGCATGAACTTATTT 57.528 30.769 0.00 0.00 0.00 1.40
82 83 6.976934 ATATTCCCCGCATGAACTTATTTT 57.023 33.333 0.00 0.00 0.00 1.82
83 84 4.448537 TTCCCCGCATGAACTTATTTTG 57.551 40.909 0.00 0.00 0.00 2.44
84 85 3.691575 TCCCCGCATGAACTTATTTTGA 58.308 40.909 0.00 0.00 0.00 2.69
85 86 4.082845 TCCCCGCATGAACTTATTTTGAA 58.917 39.130 0.00 0.00 0.00 2.69
86 87 4.082463 TCCCCGCATGAACTTATTTTGAAC 60.082 41.667 0.00 0.00 0.00 3.18
87 88 4.082245 CCCCGCATGAACTTATTTTGAACT 60.082 41.667 0.00 0.00 0.00 3.01
88 89 4.858692 CCCGCATGAACTTATTTTGAACTG 59.141 41.667 0.00 0.00 0.00 3.16
89 90 5.460646 CCGCATGAACTTATTTTGAACTGT 58.539 37.500 0.00 0.00 0.00 3.55
90 91 5.343058 CCGCATGAACTTATTTTGAACTGTG 59.657 40.000 0.00 0.00 0.00 3.66
91 92 5.914635 CGCATGAACTTATTTTGAACTGTGT 59.085 36.000 0.00 0.00 0.00 3.72
92 93 6.129378 CGCATGAACTTATTTTGAACTGTGTG 60.129 38.462 0.00 0.00 0.00 3.82
93 94 6.917477 GCATGAACTTATTTTGAACTGTGTGA 59.083 34.615 0.00 0.00 0.00 3.58
94 95 7.434897 GCATGAACTTATTTTGAACTGTGTGAA 59.565 33.333 0.00 0.00 0.00 3.18
95 96 8.745837 CATGAACTTATTTTGAACTGTGTGAAC 58.254 33.333 0.00 0.00 0.00 3.18
96 97 7.821652 TGAACTTATTTTGAACTGTGTGAACA 58.178 30.769 0.00 0.00 0.00 3.18
97 98 8.465999 TGAACTTATTTTGAACTGTGTGAACAT 58.534 29.630 0.00 0.00 0.00 2.71
98 99 9.301153 GAACTTATTTTGAACTGTGTGAACATT 57.699 29.630 0.00 0.00 0.00 2.71
99 100 9.651913 AACTTATTTTGAACTGTGTGAACATTT 57.348 25.926 0.00 0.00 0.00 2.32
100 101 9.651913 ACTTATTTTGAACTGTGTGAACATTTT 57.348 25.926 0.00 0.00 0.00 1.82
108 109 8.386606 TGAACTGTGTGAACATTTTTAAAATGC 58.613 29.630 24.90 13.48 0.00 3.56
109 110 7.840342 ACTGTGTGAACATTTTTAAAATGCA 57.160 28.000 24.90 15.50 0.00 3.96
110 111 8.261492 ACTGTGTGAACATTTTTAAAATGCAA 57.739 26.923 24.90 11.68 0.00 4.08
111 112 8.174422 ACTGTGTGAACATTTTTAAAATGCAAC 58.826 29.630 24.90 20.27 0.00 4.17
112 113 8.261492 TGTGTGAACATTTTTAAAATGCAACT 57.739 26.923 24.90 11.06 0.00 3.16
113 114 8.725148 TGTGTGAACATTTTTAAAATGCAACTT 58.275 25.926 24.90 14.52 0.00 2.66
116 117 9.352163 GTGAACATTTTTAAAATGCAACTTACG 57.648 29.630 24.90 4.23 0.00 3.18
117 118 9.088512 TGAACATTTTTAAAATGCAACTTACGT 57.911 25.926 24.90 4.84 0.00 3.57
118 119 9.909043 GAACATTTTTAAAATGCAACTTACGTT 57.091 25.926 24.90 11.86 0.00 3.99
200 201 7.840342 TTTTTGTGTATTGCATGAACAAGTT 57.160 28.000 0.00 0.00 32.75 2.66
201 202 7.840342 TTTTGTGTATTGCATGAACAAGTTT 57.160 28.000 0.00 0.00 32.75 2.66
202 203 7.840342 TTTGTGTATTGCATGAACAAGTTTT 57.160 28.000 0.00 0.00 32.75 2.43
203 204 8.932945 TTTGTGTATTGCATGAACAAGTTTTA 57.067 26.923 0.00 0.00 32.75 1.52
204 205 8.932945 TTGTGTATTGCATGAACAAGTTTTAA 57.067 26.923 0.00 0.00 31.96 1.52
205 206 8.932945 TGTGTATTGCATGAACAAGTTTTAAA 57.067 26.923 0.00 0.00 31.96 1.52
206 207 9.539825 TGTGTATTGCATGAACAAGTTTTAAAT 57.460 25.926 0.00 0.00 31.96 1.40
207 208 9.796062 GTGTATTGCATGAACAAGTTTTAAATG 57.204 29.630 0.00 0.00 31.96 2.32
208 209 8.494347 TGTATTGCATGAACAAGTTTTAAATGC 58.506 29.630 0.00 12.71 39.44 3.56
209 210 5.921004 TGCATGAACAAGTTTTAAATGCC 57.079 34.783 0.00 5.06 38.48 4.40
210 211 5.363101 TGCATGAACAAGTTTTAAATGCCA 58.637 33.333 0.00 0.00 38.48 4.92
211 212 5.236047 TGCATGAACAAGTTTTAAATGCCAC 59.764 36.000 0.00 0.00 38.48 5.01
212 213 5.236047 GCATGAACAAGTTTTAAATGCCACA 59.764 36.000 0.00 0.00 34.32 4.17
213 214 6.648502 CATGAACAAGTTTTAAATGCCACAC 58.351 36.000 0.00 0.00 0.00 3.82
214 215 5.724328 TGAACAAGTTTTAAATGCCACACA 58.276 33.333 0.00 0.00 0.00 3.72
215 216 5.578727 TGAACAAGTTTTAAATGCCACACAC 59.421 36.000 0.00 0.00 0.00 3.82
216 217 5.078411 ACAAGTTTTAAATGCCACACACA 57.922 34.783 0.00 0.00 0.00 3.72
217 218 5.482908 ACAAGTTTTAAATGCCACACACAA 58.517 33.333 0.00 0.00 0.00 3.33
218 219 6.112058 ACAAGTTTTAAATGCCACACACAAT 58.888 32.000 0.00 0.00 0.00 2.71
219 220 7.268586 ACAAGTTTTAAATGCCACACACAATA 58.731 30.769 0.00 0.00 0.00 1.90
220 221 7.437862 ACAAGTTTTAAATGCCACACACAATAG 59.562 33.333 0.00 0.00 0.00 1.73
221 222 7.283625 AGTTTTAAATGCCACACACAATAGA 57.716 32.000 0.00 0.00 0.00 1.98
222 223 7.721402 AGTTTTAAATGCCACACACAATAGAA 58.279 30.769 0.00 0.00 0.00 2.10
223 224 8.367156 AGTTTTAAATGCCACACACAATAGAAT 58.633 29.630 0.00 0.00 0.00 2.40
224 225 9.632807 GTTTTAAATGCCACACACAATAGAATA 57.367 29.630 0.00 0.00 0.00 1.75
229 230 8.752005 AATGCCACACACAATAGAATATAAGT 57.248 30.769 0.00 0.00 0.00 2.24
230 231 8.752005 ATGCCACACACAATAGAATATAAGTT 57.248 30.769 0.00 0.00 0.00 2.66
231 232 7.984391 TGCCACACACAATAGAATATAAGTTG 58.016 34.615 0.00 0.00 0.00 3.16
232 233 7.609918 TGCCACACACAATAGAATATAAGTTGT 59.390 33.333 0.00 0.00 33.63 3.32
233 234 8.458843 GCCACACACAATAGAATATAAGTTGTT 58.541 33.333 0.00 0.00 31.19 2.83
271 272 9.196552 ACTTTTATTTCAAAGTTAAGCATGCTC 57.803 29.630 22.93 8.91 43.17 4.26
272 273 9.195411 CTTTTATTTCAAAGTTAAGCATGCTCA 57.805 29.630 22.93 2.34 0.00 4.26
273 274 8.746922 TTTATTTCAAAGTTAAGCATGCTCAG 57.253 30.769 22.93 6.17 0.00 3.35
274 275 5.772825 TTTCAAAGTTAAGCATGCTCAGT 57.227 34.783 22.93 11.02 0.00 3.41
275 276 5.772825 TTCAAAGTTAAGCATGCTCAGTT 57.227 34.783 22.93 16.43 0.00 3.16
276 277 5.772825 TCAAAGTTAAGCATGCTCAGTTT 57.227 34.783 22.93 20.97 0.00 2.66
277 278 5.522456 TCAAAGTTAAGCATGCTCAGTTTG 58.478 37.500 31.77 31.77 34.34 2.93
278 279 5.299028 TCAAAGTTAAGCATGCTCAGTTTGA 59.701 36.000 33.79 33.79 36.85 2.69
279 280 5.772825 AAGTTAAGCATGCTCAGTTTGAA 57.227 34.783 22.93 4.12 0.00 2.69
280 281 5.368256 AGTTAAGCATGCTCAGTTTGAAG 57.632 39.130 22.93 0.00 0.00 3.02
281 282 2.719426 AAGCATGCTCAGTTTGAAGC 57.281 45.000 22.93 0.00 0.00 3.86
282 283 1.612676 AGCATGCTCAGTTTGAAGCA 58.387 45.000 16.30 0.00 35.91 3.91
283 284 1.958579 AGCATGCTCAGTTTGAAGCAA 59.041 42.857 16.30 0.00 35.40 3.91
284 285 2.561419 AGCATGCTCAGTTTGAAGCAAT 59.439 40.909 16.30 0.00 35.40 3.56
285 286 3.006537 AGCATGCTCAGTTTGAAGCAATT 59.993 39.130 16.30 0.00 35.40 2.32
286 287 3.744426 GCATGCTCAGTTTGAAGCAATTT 59.256 39.130 11.37 0.00 35.40 1.82
287 288 4.143179 GCATGCTCAGTTTGAAGCAATTTC 60.143 41.667 11.37 0.00 35.40 2.17
288 289 4.652421 TGCTCAGTTTGAAGCAATTTCA 57.348 36.364 0.00 0.00 43.92 2.69
289 290 4.613944 TGCTCAGTTTGAAGCAATTTCAG 58.386 39.130 0.00 0.00 46.01 3.02
290 291 3.985925 GCTCAGTTTGAAGCAATTTCAGG 59.014 43.478 0.00 0.00 46.01 3.86
291 292 4.261741 GCTCAGTTTGAAGCAATTTCAGGA 60.262 41.667 0.00 0.00 46.01 3.86
292 293 5.566230 GCTCAGTTTGAAGCAATTTCAGGAT 60.566 40.000 0.00 0.00 46.01 3.24
293 294 5.775686 TCAGTTTGAAGCAATTTCAGGATG 58.224 37.500 0.00 0.00 46.01 3.51
294 295 4.927425 CAGTTTGAAGCAATTTCAGGATGG 59.073 41.667 0.00 0.00 46.01 3.51
295 296 4.020839 AGTTTGAAGCAATTTCAGGATGGG 60.021 41.667 0.00 0.00 46.01 4.00
296 297 3.173953 TGAAGCAATTTCAGGATGGGT 57.826 42.857 0.00 0.00 40.82 4.51
297 298 2.827322 TGAAGCAATTTCAGGATGGGTG 59.173 45.455 0.00 0.00 40.82 4.61
298 299 2.905415 AGCAATTTCAGGATGGGTGA 57.095 45.000 0.00 0.00 36.16 4.02
299 300 2.450476 AGCAATTTCAGGATGGGTGAC 58.550 47.619 0.00 0.00 36.16 3.67
300 301 2.042162 AGCAATTTCAGGATGGGTGACT 59.958 45.455 0.00 0.00 36.16 3.41
301 302 2.165030 GCAATTTCAGGATGGGTGACTG 59.835 50.000 0.00 0.00 36.16 3.51
302 303 2.756760 CAATTTCAGGATGGGTGACTGG 59.243 50.000 0.00 0.00 36.16 4.00
303 304 0.038166 TTTCAGGATGGGTGACTGGC 59.962 55.000 0.00 0.00 36.16 4.85
304 305 0.842030 TTCAGGATGGGTGACTGGCT 60.842 55.000 0.00 0.00 36.16 4.75
305 306 1.077930 CAGGATGGGTGACTGGCTG 60.078 63.158 0.00 0.00 0.00 4.85
306 307 1.229625 AGGATGGGTGACTGGCTGA 60.230 57.895 0.00 0.00 0.00 4.26
307 308 1.222936 GGATGGGTGACTGGCTGAG 59.777 63.158 0.00 0.00 0.00 3.35
308 309 1.267574 GGATGGGTGACTGGCTGAGA 61.268 60.000 0.00 0.00 0.00 3.27
309 310 0.615331 GATGGGTGACTGGCTGAGAA 59.385 55.000 0.00 0.00 0.00 2.87
310 311 1.211457 GATGGGTGACTGGCTGAGAAT 59.789 52.381 0.00 0.00 0.00 2.40
311 312 1.951209 TGGGTGACTGGCTGAGAATA 58.049 50.000 0.00 0.00 0.00 1.75
312 313 2.481441 TGGGTGACTGGCTGAGAATAT 58.519 47.619 0.00 0.00 0.00 1.28
313 314 2.171237 TGGGTGACTGGCTGAGAATATG 59.829 50.000 0.00 0.00 0.00 1.78
314 315 2.486191 GGGTGACTGGCTGAGAATATGG 60.486 54.545 0.00 0.00 0.00 2.74
315 316 2.171448 GGTGACTGGCTGAGAATATGGT 59.829 50.000 0.00 0.00 0.00 3.55
316 317 3.370953 GGTGACTGGCTGAGAATATGGTT 60.371 47.826 0.00 0.00 0.00 3.67
317 318 3.624861 GTGACTGGCTGAGAATATGGTTG 59.375 47.826 0.00 0.00 0.00 3.77
318 319 3.519107 TGACTGGCTGAGAATATGGTTGA 59.481 43.478 0.00 0.00 0.00 3.18
319 320 4.125703 GACTGGCTGAGAATATGGTTGAG 58.874 47.826 0.00 0.00 0.00 3.02
320 321 3.118112 ACTGGCTGAGAATATGGTTGAGG 60.118 47.826 0.00 0.00 0.00 3.86
321 322 2.846206 TGGCTGAGAATATGGTTGAGGT 59.154 45.455 0.00 0.00 0.00 3.85
322 323 3.209410 GGCTGAGAATATGGTTGAGGTG 58.791 50.000 0.00 0.00 0.00 4.00
323 324 2.615912 GCTGAGAATATGGTTGAGGTGC 59.384 50.000 0.00 0.00 0.00 5.01
324 325 2.868583 CTGAGAATATGGTTGAGGTGCG 59.131 50.000 0.00 0.00 0.00 5.34
325 326 1.599542 GAGAATATGGTTGAGGTGCGC 59.400 52.381 0.00 0.00 0.00 6.09
326 327 1.065491 AGAATATGGTTGAGGTGCGCA 60.065 47.619 5.66 5.66 0.00 6.09
327 328 1.064060 GAATATGGTTGAGGTGCGCAC 59.936 52.381 32.15 32.15 0.00 5.34
328 329 1.089481 ATATGGTTGAGGTGCGCACG 61.089 55.000 32.35 0.00 0.00 5.34
329 330 2.161078 TATGGTTGAGGTGCGCACGA 62.161 55.000 32.35 17.16 0.00 4.35
330 331 3.414700 GGTTGAGGTGCGCACGAG 61.415 66.667 32.35 0.00 0.00 4.18
331 332 2.661866 GTTGAGGTGCGCACGAGT 60.662 61.111 32.35 20.34 0.00 4.18
332 333 2.661537 TTGAGGTGCGCACGAGTG 60.662 61.111 32.35 0.00 0.00 3.51
333 334 3.145422 TTGAGGTGCGCACGAGTGA 62.145 57.895 32.35 15.28 0.00 3.41
334 335 2.355837 GAGGTGCGCACGAGTGAA 60.356 61.111 32.35 0.00 0.00 3.18
335 336 2.356313 AGGTGCGCACGAGTGAAG 60.356 61.111 32.35 1.37 0.00 3.02
336 337 2.355837 GGTGCGCACGAGTGAAGA 60.356 61.111 32.35 0.00 0.00 2.87
337 338 2.658707 GGTGCGCACGAGTGAAGAC 61.659 63.158 32.35 12.86 0.00 3.01
338 339 1.949133 GTGCGCACGAGTGAAGACA 60.949 57.895 26.77 0.00 0.00 3.41
339 340 1.227118 TGCGCACGAGTGAAGACAA 60.227 52.632 5.66 0.00 0.00 3.18
340 341 0.808060 TGCGCACGAGTGAAGACAAA 60.808 50.000 5.66 0.00 0.00 2.83
341 342 0.512952 GCGCACGAGTGAAGACAAAT 59.487 50.000 0.30 0.00 0.00 2.32
342 343 1.069906 GCGCACGAGTGAAGACAAATT 60.070 47.619 0.30 0.00 0.00 1.82
343 344 2.156891 GCGCACGAGTGAAGACAAATTA 59.843 45.455 0.30 0.00 0.00 1.40
344 345 3.181520 GCGCACGAGTGAAGACAAATTAT 60.182 43.478 0.30 0.00 0.00 1.28
345 346 4.326205 CGCACGAGTGAAGACAAATTATG 58.674 43.478 7.50 0.00 0.00 1.90
346 347 4.091424 GCACGAGTGAAGACAAATTATGC 58.909 43.478 7.50 0.00 0.00 3.14
347 348 4.378356 GCACGAGTGAAGACAAATTATGCA 60.378 41.667 7.50 0.00 0.00 3.96
348 349 5.319139 CACGAGTGAAGACAAATTATGCAG 58.681 41.667 0.00 0.00 0.00 4.41
349 350 4.393062 ACGAGTGAAGACAAATTATGCAGG 59.607 41.667 0.00 0.00 0.00 4.85
350 351 4.631377 CGAGTGAAGACAAATTATGCAGGA 59.369 41.667 0.00 0.00 0.00 3.86
351 352 5.122239 CGAGTGAAGACAAATTATGCAGGAA 59.878 40.000 0.00 0.00 0.00 3.36
352 353 6.348458 CGAGTGAAGACAAATTATGCAGGAAA 60.348 38.462 0.00 0.00 0.00 3.13
353 354 6.917533 AGTGAAGACAAATTATGCAGGAAAG 58.082 36.000 0.00 0.00 0.00 2.62
354 355 6.716628 AGTGAAGACAAATTATGCAGGAAAGA 59.283 34.615 0.00 0.00 0.00 2.52
355 356 6.803807 GTGAAGACAAATTATGCAGGAAAGAC 59.196 38.462 0.00 0.00 0.00 3.01
356 357 6.716628 TGAAGACAAATTATGCAGGAAAGACT 59.283 34.615 0.00 0.00 0.00 3.24
357 358 7.882791 TGAAGACAAATTATGCAGGAAAGACTA 59.117 33.333 0.00 0.00 0.00 2.59
358 359 7.856145 AGACAAATTATGCAGGAAAGACTAG 57.144 36.000 0.00 0.00 0.00 2.57
359 360 7.398024 AGACAAATTATGCAGGAAAGACTAGT 58.602 34.615 0.00 0.00 0.00 2.57
360 361 7.335422 AGACAAATTATGCAGGAAAGACTAGTG 59.665 37.037 0.00 0.00 0.00 2.74
361 362 6.942576 ACAAATTATGCAGGAAAGACTAGTGT 59.057 34.615 0.00 0.00 0.00 3.55
362 363 7.448469 ACAAATTATGCAGGAAAGACTAGTGTT 59.552 33.333 0.00 0.00 0.00 3.32
363 364 6.992063 ATTATGCAGGAAAGACTAGTGTTG 57.008 37.500 5.96 0.00 0.00 3.33
364 365 4.623932 ATGCAGGAAAGACTAGTGTTGA 57.376 40.909 5.96 0.00 0.00 3.18
365 366 4.623932 TGCAGGAAAGACTAGTGTTGAT 57.376 40.909 5.96 0.00 0.00 2.57
366 367 4.569943 TGCAGGAAAGACTAGTGTTGATC 58.430 43.478 5.96 1.08 0.00 2.92
367 368 4.284490 TGCAGGAAAGACTAGTGTTGATCT 59.716 41.667 5.96 2.00 0.00 2.75
368 369 4.629200 GCAGGAAAGACTAGTGTTGATCTG 59.371 45.833 17.91 17.91 0.00 2.90
369 370 5.788450 CAGGAAAGACTAGTGTTGATCTGT 58.212 41.667 5.96 0.00 0.00 3.41
370 371 5.636965 CAGGAAAGACTAGTGTTGATCTGTG 59.363 44.000 5.96 0.74 0.00 3.66
371 372 4.932200 GGAAAGACTAGTGTTGATCTGTGG 59.068 45.833 5.96 0.00 0.00 4.17
372 373 5.279506 GGAAAGACTAGTGTTGATCTGTGGA 60.280 44.000 5.96 0.00 0.00 4.02
373 374 5.398603 AAGACTAGTGTTGATCTGTGGAG 57.601 43.478 4.15 0.00 0.00 3.86
374 375 3.194542 AGACTAGTGTTGATCTGTGGAGC 59.805 47.826 0.00 0.00 0.00 4.70
375 376 2.234908 ACTAGTGTTGATCTGTGGAGCC 59.765 50.000 0.00 0.00 0.00 4.70
376 377 1.059098 AGTGTTGATCTGTGGAGCCA 58.941 50.000 0.00 0.00 0.00 4.75
377 378 1.002888 AGTGTTGATCTGTGGAGCCAG 59.997 52.381 0.00 0.00 0.00 4.85
378 379 1.059098 TGTTGATCTGTGGAGCCAGT 58.941 50.000 0.00 0.00 34.02 4.00
379 380 1.002430 TGTTGATCTGTGGAGCCAGTC 59.998 52.381 0.00 0.00 34.02 3.51
380 381 1.277557 GTTGATCTGTGGAGCCAGTCT 59.722 52.381 0.00 0.00 34.02 3.24
381 382 2.497675 GTTGATCTGTGGAGCCAGTCTA 59.502 50.000 0.00 0.00 34.02 2.59
382 383 2.382882 TGATCTGTGGAGCCAGTCTAG 58.617 52.381 0.00 0.00 34.02 2.43
383 384 2.291865 TGATCTGTGGAGCCAGTCTAGT 60.292 50.000 0.00 0.00 34.02 2.57
384 385 2.310779 TCTGTGGAGCCAGTCTAGTT 57.689 50.000 0.00 0.00 34.02 2.24
385 386 2.171840 TCTGTGGAGCCAGTCTAGTTC 58.828 52.381 0.00 0.00 34.02 3.01
386 387 1.205893 CTGTGGAGCCAGTCTAGTTCC 59.794 57.143 0.00 0.00 0.00 3.62
387 388 0.537653 GTGGAGCCAGTCTAGTTCCC 59.462 60.000 0.00 0.00 0.00 3.97
388 389 0.970937 TGGAGCCAGTCTAGTTCCCG 60.971 60.000 0.00 0.00 0.00 5.14
389 390 0.971447 GGAGCCAGTCTAGTTCCCGT 60.971 60.000 0.00 0.00 0.00 5.28
390 391 0.456628 GAGCCAGTCTAGTTCCCGTC 59.543 60.000 0.00 0.00 0.00 4.79
391 392 0.251653 AGCCAGTCTAGTTCCCGTCA 60.252 55.000 0.00 0.00 0.00 4.35
392 393 0.606604 GCCAGTCTAGTTCCCGTCAA 59.393 55.000 0.00 0.00 0.00 3.18
393 394 1.404315 GCCAGTCTAGTTCCCGTCAAG 60.404 57.143 0.00 0.00 0.00 3.02
394 395 2.168496 CCAGTCTAGTTCCCGTCAAGA 58.832 52.381 0.00 0.00 0.00 3.02
395 396 2.164624 CCAGTCTAGTTCCCGTCAAGAG 59.835 54.545 0.00 0.00 0.00 2.85
396 397 2.820787 CAGTCTAGTTCCCGTCAAGAGT 59.179 50.000 0.00 0.00 0.00 3.24
397 398 4.008330 CAGTCTAGTTCCCGTCAAGAGTA 58.992 47.826 0.00 0.00 0.00 2.59
398 399 4.458295 CAGTCTAGTTCCCGTCAAGAGTAA 59.542 45.833 0.00 0.00 0.00 2.24
399 400 4.458642 AGTCTAGTTCCCGTCAAGAGTAAC 59.541 45.833 0.00 0.00 0.00 2.50
400 401 2.719426 AGTTCCCGTCAAGAGTAACG 57.281 50.000 0.00 0.00 38.58 3.18
406 407 2.701073 CGTCAAGAGTAACGGTCAGT 57.299 50.000 0.00 0.00 35.32 3.41
407 408 3.818961 CGTCAAGAGTAACGGTCAGTA 57.181 47.619 0.00 0.00 35.32 2.74
408 409 4.151258 CGTCAAGAGTAACGGTCAGTAA 57.849 45.455 0.00 0.00 35.32 2.24
409 410 3.910767 CGTCAAGAGTAACGGTCAGTAAC 59.089 47.826 0.00 0.00 35.32 2.50
410 411 3.910767 GTCAAGAGTAACGGTCAGTAACG 59.089 47.826 0.00 0.00 0.00 3.18
411 412 3.058016 TCAAGAGTAACGGTCAGTAACGG 60.058 47.826 0.00 0.00 0.00 4.44
412 413 1.200948 AGAGTAACGGTCAGTAACGGC 59.799 52.381 0.00 0.00 0.00 5.68
413 414 0.109597 AGTAACGGTCAGTAACGGCG 60.110 55.000 4.80 4.80 0.00 6.46
414 415 1.072666 GTAACGGTCAGTAACGGCGG 61.073 60.000 13.24 0.00 0.00 6.13
415 416 2.211619 TAACGGTCAGTAACGGCGGG 62.212 60.000 13.24 0.00 0.00 6.13
416 417 4.060038 CGGTCAGTAACGGCGGGT 62.060 66.667 13.24 0.21 0.00 5.28
417 418 2.433664 GGTCAGTAACGGCGGGTG 60.434 66.667 13.24 2.55 0.00 4.61
418 419 2.341176 GTCAGTAACGGCGGGTGT 59.659 61.111 13.24 0.00 0.00 4.16
419 420 2.025418 GTCAGTAACGGCGGGTGTG 61.025 63.158 13.24 3.35 0.00 3.82
420 421 2.029964 CAGTAACGGCGGGTGTGT 59.970 61.111 13.24 0.00 0.00 3.72
421 422 2.025418 CAGTAACGGCGGGTGTGTC 61.025 63.158 13.24 0.00 0.00 3.67
422 423 2.739671 GTAACGGCGGGTGTGTCC 60.740 66.667 13.24 0.00 0.00 4.02
430 431 4.922026 GGGTGTGTCCGTGGCGTT 62.922 66.667 0.00 0.00 37.00 4.84
431 432 2.898343 GGTGTGTCCGTGGCGTTT 60.898 61.111 0.00 0.00 0.00 3.60
432 433 2.629763 GTGTGTCCGTGGCGTTTC 59.370 61.111 0.00 0.00 0.00 2.78
433 434 2.174969 GTGTGTCCGTGGCGTTTCA 61.175 57.895 0.00 0.00 0.00 2.69
434 435 1.885388 TGTGTCCGTGGCGTTTCAG 60.885 57.895 0.00 0.00 0.00 3.02
435 436 1.593209 GTGTCCGTGGCGTTTCAGA 60.593 57.895 0.00 0.00 0.00 3.27
436 437 1.593209 TGTCCGTGGCGTTTCAGAC 60.593 57.895 0.00 0.00 0.00 3.51
445 446 4.647654 GTTTCAGACGAGGACGCA 57.352 55.556 0.00 0.00 43.96 5.24
446 447 3.123674 GTTTCAGACGAGGACGCAT 57.876 52.632 0.00 0.00 43.96 4.73
447 448 0.716108 GTTTCAGACGAGGACGCATG 59.284 55.000 0.00 0.00 43.96 4.06
448 449 1.014044 TTTCAGACGAGGACGCATGC 61.014 55.000 7.91 7.91 43.96 4.06
449 450 2.835701 TTCAGACGAGGACGCATGCC 62.836 60.000 13.15 0.00 43.96 4.40
450 451 4.148825 AGACGAGGACGCATGCCC 62.149 66.667 13.15 8.63 43.96 5.36
451 452 4.148825 GACGAGGACGCATGCCCT 62.149 66.667 14.61 14.61 43.96 5.19
452 453 3.665675 GACGAGGACGCATGCCCTT 62.666 63.158 15.65 3.19 43.96 3.95
453 454 2.292794 GACGAGGACGCATGCCCTTA 62.293 60.000 15.65 0.00 43.96 2.69
454 455 1.069765 CGAGGACGCATGCCCTTAT 59.930 57.895 15.65 0.00 31.84 1.73
455 456 0.946221 CGAGGACGCATGCCCTTATC 60.946 60.000 15.65 5.86 31.84 1.75
456 457 0.603975 GAGGACGCATGCCCTTATCC 60.604 60.000 15.65 12.68 31.84 2.59
457 458 1.961277 GGACGCATGCCCTTATCCG 60.961 63.158 13.15 0.00 0.00 4.18
458 459 1.961277 GACGCATGCCCTTATCCGG 60.961 63.158 13.15 0.00 0.00 5.14
469 470 1.873591 CCTTATCCGGGAGCAAAATCG 59.126 52.381 0.00 0.00 0.00 3.34
470 471 2.484770 CCTTATCCGGGAGCAAAATCGA 60.485 50.000 0.00 0.00 0.00 3.59
471 472 2.526304 TATCCGGGAGCAAAATCGAG 57.474 50.000 0.00 0.00 0.00 4.04
472 473 0.815615 ATCCGGGAGCAAAATCGAGC 60.816 55.000 0.00 0.00 0.00 5.03
473 474 2.703409 CGGGAGCAAAATCGAGCG 59.297 61.111 0.00 0.00 35.48 5.03
474 475 2.813179 CGGGAGCAAAATCGAGCGG 61.813 63.158 0.00 0.00 35.48 5.52
475 476 1.745489 GGGAGCAAAATCGAGCGGT 60.745 57.895 0.00 0.00 35.48 5.68
476 477 1.706287 GGGAGCAAAATCGAGCGGTC 61.706 60.000 4.06 4.06 35.48 4.79
477 478 0.741221 GGAGCAAAATCGAGCGGTCT 60.741 55.000 13.48 0.00 35.48 3.85
478 479 1.079503 GAGCAAAATCGAGCGGTCTT 58.920 50.000 13.48 0.00 35.48 3.01
479 480 0.798776 AGCAAAATCGAGCGGTCTTG 59.201 50.000 13.48 11.08 35.48 3.02
480 481 0.517316 GCAAAATCGAGCGGTCTTGT 59.483 50.000 13.48 0.00 0.00 3.16
481 482 1.730064 GCAAAATCGAGCGGTCTTGTA 59.270 47.619 13.48 0.00 0.00 2.41
482 483 2.474032 GCAAAATCGAGCGGTCTTGTAC 60.474 50.000 13.48 0.00 0.00 2.90
483 484 2.005971 AAATCGAGCGGTCTTGTACC 57.994 50.000 13.48 0.00 45.77 3.34
494 495 3.963428 GTCTTGTACCATGGTCAGACT 57.037 47.619 28.69 9.33 32.02 3.24
495 496 3.589988 GTCTTGTACCATGGTCAGACTG 58.410 50.000 28.69 17.49 32.02 3.51
496 497 2.028112 TCTTGTACCATGGTCAGACTGC 60.028 50.000 23.76 0.00 0.00 4.40
497 498 0.613260 TGTACCATGGTCAGACTGCC 59.387 55.000 23.76 3.31 0.00 4.85
498 499 0.107654 GTACCATGGTCAGACTGCCC 60.108 60.000 23.76 4.62 0.00 5.36
499 500 1.271840 TACCATGGTCAGACTGCCCC 61.272 60.000 23.76 2.20 0.00 5.80
500 501 2.273449 CATGGTCAGACTGCCCCC 59.727 66.667 0.00 0.00 0.00 5.40
501 502 2.204136 ATGGTCAGACTGCCCCCA 60.204 61.111 0.00 5.53 0.00 4.96
502 503 1.620589 ATGGTCAGACTGCCCCCAT 60.621 57.895 12.66 12.66 0.00 4.00
503 504 1.929860 ATGGTCAGACTGCCCCCATG 61.930 60.000 15.96 0.00 34.68 3.66
504 505 2.273449 GTCAGACTGCCCCCATGG 59.727 66.667 4.14 4.14 37.09 3.66
515 516 2.705410 CCCATGGGAGGAGGAGGA 59.295 66.667 28.27 0.00 37.50 3.71
516 517 1.768077 CCCATGGGAGGAGGAGGAC 60.768 68.421 28.27 0.00 37.50 3.85
517 518 1.003442 CCATGGGAGGAGGAGGACA 59.997 63.158 2.85 0.00 0.00 4.02
518 519 0.621571 CCATGGGAGGAGGAGGACAA 60.622 60.000 2.85 0.00 0.00 3.18
519 520 0.543749 CATGGGAGGAGGAGGACAAC 59.456 60.000 0.00 0.00 0.00 3.32
520 521 0.978146 ATGGGAGGAGGAGGACAACG 60.978 60.000 0.00 0.00 0.00 4.10
521 522 1.305046 GGGAGGAGGAGGACAACGA 60.305 63.158 0.00 0.00 0.00 3.85
522 523 1.605971 GGGAGGAGGAGGACAACGAC 61.606 65.000 0.00 0.00 0.00 4.34
523 524 1.507174 GAGGAGGAGGACAACGACG 59.493 63.158 0.00 0.00 0.00 5.12
524 525 0.959372 GAGGAGGAGGACAACGACGA 60.959 60.000 0.00 0.00 0.00 4.20
525 526 0.961358 AGGAGGAGGACAACGACGAG 60.961 60.000 0.00 0.00 0.00 4.18
526 527 1.242665 GGAGGAGGACAACGACGAGT 61.243 60.000 0.00 0.00 0.00 4.18
527 528 0.168568 GAGGAGGACAACGACGAGTC 59.831 60.000 0.00 9.20 0.00 3.36
528 529 0.536687 AGGAGGACAACGACGAGTCA 60.537 55.000 20.53 0.00 36.50 3.41
529 530 0.109689 GGAGGACAACGACGAGTCAG 60.110 60.000 20.53 0.00 36.50 3.51
530 531 0.873054 GAGGACAACGACGAGTCAGA 59.127 55.000 20.53 0.00 36.50 3.27
531 532 0.592148 AGGACAACGACGAGTCAGAC 59.408 55.000 20.53 0.00 36.50 3.51
532 533 0.309922 GGACAACGACGAGTCAGACA 59.690 55.000 20.53 0.00 36.50 3.41
533 534 1.268896 GGACAACGACGAGTCAGACAA 60.269 52.381 20.53 0.00 36.50 3.18
534 535 1.779724 GACAACGACGAGTCAGACAAC 59.220 52.381 16.33 0.00 34.93 3.32
535 536 1.404391 ACAACGACGAGTCAGACAACT 59.596 47.619 0.00 0.00 0.00 3.16
536 537 2.044860 CAACGACGAGTCAGACAACTC 58.955 52.381 0.00 0.00 41.88 3.01
537 538 0.592148 ACGACGAGTCAGACAACTCC 59.408 55.000 0.00 0.00 42.23 3.85
538 539 0.452950 CGACGAGTCAGACAACTCCG 60.453 60.000 2.66 1.06 42.23 4.63
539 540 0.109689 GACGAGTCAGACAACTCCGG 60.110 60.000 2.66 0.00 42.23 5.14
540 541 1.444553 CGAGTCAGACAACTCCGGC 60.445 63.158 2.66 0.00 42.23 6.13
541 542 1.444553 GAGTCAGACAACTCCGGCG 60.445 63.158 0.00 0.00 39.85 6.46
542 543 1.863662 GAGTCAGACAACTCCGGCGA 61.864 60.000 9.30 0.00 39.85 5.54
543 544 1.215647 GTCAGACAACTCCGGCGAT 59.784 57.895 9.30 0.00 0.00 4.58
544 545 1.078759 GTCAGACAACTCCGGCGATG 61.079 60.000 9.30 0.00 0.00 3.84
545 546 1.215382 CAGACAACTCCGGCGATGA 59.785 57.895 9.30 0.00 0.00 2.92
546 547 0.389817 CAGACAACTCCGGCGATGAA 60.390 55.000 9.30 0.00 0.00 2.57
547 548 0.389948 AGACAACTCCGGCGATGAAC 60.390 55.000 9.30 2.63 0.00 3.18
548 549 0.669318 GACAACTCCGGCGATGAACA 60.669 55.000 9.30 0.00 0.00 3.18
549 550 0.036388 ACAACTCCGGCGATGAACAT 60.036 50.000 9.30 0.00 0.00 2.71
550 551 1.206132 ACAACTCCGGCGATGAACATA 59.794 47.619 9.30 0.00 0.00 2.29
551 552 2.158957 ACAACTCCGGCGATGAACATAT 60.159 45.455 9.30 0.00 0.00 1.78
552 553 2.440539 ACTCCGGCGATGAACATATC 57.559 50.000 9.30 0.00 0.00 1.63
553 554 1.000955 ACTCCGGCGATGAACATATCC 59.999 52.381 9.30 0.00 0.00 2.59
554 555 1.000843 CTCCGGCGATGAACATATCCA 59.999 52.381 9.30 0.00 0.00 3.41
555 556 1.000843 TCCGGCGATGAACATATCCAG 59.999 52.381 9.30 0.00 0.00 3.86
556 557 0.792640 CGGCGATGAACATATCCAGC 59.207 55.000 0.00 0.00 0.00 4.85
557 558 1.606480 CGGCGATGAACATATCCAGCT 60.606 52.381 0.00 0.00 0.00 4.24
558 559 2.072298 GGCGATGAACATATCCAGCTC 58.928 52.381 0.00 0.00 0.00 4.09
559 560 1.723542 GCGATGAACATATCCAGCTCG 59.276 52.381 0.00 0.00 0.00 5.03
560 561 2.608016 GCGATGAACATATCCAGCTCGA 60.608 50.000 0.00 0.00 0.00 4.04
561 562 3.842820 CGATGAACATATCCAGCTCGAT 58.157 45.455 0.00 0.00 0.00 3.59
562 563 3.856521 CGATGAACATATCCAGCTCGATC 59.143 47.826 0.00 0.00 0.00 3.69
563 564 3.667497 TGAACATATCCAGCTCGATCC 57.333 47.619 0.00 0.00 0.00 3.36
564 565 2.965147 TGAACATATCCAGCTCGATCCA 59.035 45.455 0.00 0.00 0.00 3.41
565 566 3.580022 TGAACATATCCAGCTCGATCCAT 59.420 43.478 0.00 0.00 0.00 3.41
566 567 4.040829 TGAACATATCCAGCTCGATCCATT 59.959 41.667 0.00 0.00 0.00 3.16
567 568 4.630644 ACATATCCAGCTCGATCCATTT 57.369 40.909 0.00 0.00 0.00 2.32
568 569 4.978099 ACATATCCAGCTCGATCCATTTT 58.022 39.130 0.00 0.00 0.00 1.82
569 570 4.758674 ACATATCCAGCTCGATCCATTTTG 59.241 41.667 0.00 0.00 0.00 2.44
570 571 2.787473 TCCAGCTCGATCCATTTTGT 57.213 45.000 0.00 0.00 0.00 2.83
571 572 2.358957 TCCAGCTCGATCCATTTTGTG 58.641 47.619 0.00 0.00 0.00 3.33
572 573 2.086869 CCAGCTCGATCCATTTTGTGT 58.913 47.619 0.00 0.00 0.00 3.72
573 574 2.096496 CCAGCTCGATCCATTTTGTGTC 59.904 50.000 0.00 0.00 0.00 3.67
574 575 3.005554 CAGCTCGATCCATTTTGTGTCT 58.994 45.455 0.00 0.00 0.00 3.41
575 576 3.438087 CAGCTCGATCCATTTTGTGTCTT 59.562 43.478 0.00 0.00 0.00 3.01
576 577 3.686726 AGCTCGATCCATTTTGTGTCTTC 59.313 43.478 0.00 0.00 0.00 2.87
577 578 3.484229 GCTCGATCCATTTTGTGTCTTCG 60.484 47.826 0.00 0.00 0.00 3.79
578 579 3.920446 TCGATCCATTTTGTGTCTTCGA 58.080 40.909 0.00 0.00 32.07 3.71
579 580 3.678072 TCGATCCATTTTGTGTCTTCGAC 59.322 43.478 0.00 0.00 30.61 4.20
580 581 3.181520 CGATCCATTTTGTGTCTTCGACC 60.182 47.826 0.00 0.00 0.00 4.79
581 582 2.139917 TCCATTTTGTGTCTTCGACCG 58.860 47.619 0.00 0.00 0.00 4.79
582 583 1.196808 CCATTTTGTGTCTTCGACCGG 59.803 52.381 0.00 0.00 0.00 5.28
583 584 1.871039 CATTTTGTGTCTTCGACCGGT 59.129 47.619 6.92 6.92 0.00 5.28
584 585 2.886862 TTTTGTGTCTTCGACCGGTA 57.113 45.000 7.34 0.00 0.00 4.02
585 586 2.886862 TTTGTGTCTTCGACCGGTAA 57.113 45.000 7.34 0.00 0.00 2.85
586 587 3.389925 TTTGTGTCTTCGACCGGTAAT 57.610 42.857 7.34 0.00 0.00 1.89
587 588 3.389925 TTGTGTCTTCGACCGGTAATT 57.610 42.857 7.34 0.00 0.00 1.40
588 589 2.950433 TGTGTCTTCGACCGGTAATTC 58.050 47.619 7.34 0.00 0.00 2.17
589 590 2.265683 GTGTCTTCGACCGGTAATTCC 58.734 52.381 7.34 0.00 0.00 3.01
601 602 3.385079 GGTAATTCCGCGACAAAGAAG 57.615 47.619 8.23 0.00 0.00 2.85
602 603 2.095372 GGTAATTCCGCGACAAAGAAGG 59.905 50.000 8.23 0.00 0.00 3.46
603 604 2.178912 AATTCCGCGACAAAGAAGGA 57.821 45.000 8.23 0.00 0.00 3.36
604 605 2.178912 ATTCCGCGACAAAGAAGGAA 57.821 45.000 8.23 0.00 43.98 3.36
605 606 1.956297 TTCCGCGACAAAGAAGGAAA 58.044 45.000 8.23 0.00 37.96 3.13
606 607 1.956297 TCCGCGACAAAGAAGGAAAA 58.044 45.000 8.23 0.00 0.00 2.29
607 608 1.871039 TCCGCGACAAAGAAGGAAAAG 59.129 47.619 8.23 0.00 0.00 2.27
608 609 1.069227 CCGCGACAAAGAAGGAAAAGG 60.069 52.381 8.23 0.00 0.00 3.11
609 610 1.663161 CGCGACAAAGAAGGAAAAGGC 60.663 52.381 0.00 0.00 0.00 4.35
610 611 1.336755 GCGACAAAGAAGGAAAAGGCA 59.663 47.619 0.00 0.00 0.00 4.75
611 612 2.223711 GCGACAAAGAAGGAAAAGGCAA 60.224 45.455 0.00 0.00 0.00 4.52
612 613 3.372060 CGACAAAGAAGGAAAAGGCAAC 58.628 45.455 0.00 0.00 0.00 4.17
613 614 3.181491 CGACAAAGAAGGAAAAGGCAACA 60.181 43.478 0.00 0.00 41.41 3.33
614 615 4.112634 GACAAAGAAGGAAAAGGCAACAC 58.887 43.478 0.00 0.00 41.41 3.32
615 616 3.513515 ACAAAGAAGGAAAAGGCAACACA 59.486 39.130 0.00 0.00 41.41 3.72
616 617 4.020662 ACAAAGAAGGAAAAGGCAACACAA 60.021 37.500 0.00 0.00 41.41 3.33
617 618 4.391405 AAGAAGGAAAAGGCAACACAAG 57.609 40.909 0.00 0.00 41.41 3.16
618 619 2.695147 AGAAGGAAAAGGCAACACAAGG 59.305 45.455 0.00 0.00 41.41 3.61
619 620 1.413118 AGGAAAAGGCAACACAAGGG 58.587 50.000 0.00 0.00 41.41 3.95
620 621 0.249868 GGAAAAGGCAACACAAGGGC 60.250 55.000 0.00 0.00 41.41 5.19
624 625 3.305516 GGCAACACAAGGGCCAGG 61.306 66.667 6.18 0.00 46.92 4.45
625 626 3.305516 GCAACACAAGGGCCAGGG 61.306 66.667 6.18 0.33 0.00 4.45
626 627 3.305516 CAACACAAGGGCCAGGGC 61.306 66.667 6.18 3.77 41.06 5.19
627 628 3.831637 AACACAAGGGCCAGGGCA 61.832 61.111 16.36 0.00 44.11 5.36
628 629 3.164610 AACACAAGGGCCAGGGCAT 62.165 57.895 16.36 4.33 44.11 4.40
629 630 2.757099 CACAAGGGCCAGGGCATC 60.757 66.667 16.36 5.33 44.11 3.91
630 631 2.943265 ACAAGGGCCAGGGCATCT 60.943 61.111 16.36 7.61 44.11 2.90
631 632 2.441532 CAAGGGCCAGGGCATCTG 60.442 66.667 16.36 5.46 44.11 2.90
632 633 2.943265 AAGGGCCAGGGCATCTGT 60.943 61.111 16.36 0.00 44.11 3.41
633 634 3.292481 AAGGGCCAGGGCATCTGTG 62.292 63.158 16.36 0.00 44.11 3.66
634 635 4.828296 GGGCCAGGGCATCTGTGG 62.828 72.222 16.36 0.00 44.11 4.17
635 636 3.731728 GGCCAGGGCATCTGTGGA 61.732 66.667 13.10 0.00 44.11 4.02
636 637 2.599597 GCCAGGGCATCTGTGGAT 59.400 61.111 5.20 0.00 41.83 3.41
638 639 1.152819 CCAGGGCATCTGTGGATGG 60.153 63.158 7.89 0.00 46.77 3.51
639 640 1.611419 CAGGGCATCTGTGGATGGT 59.389 57.895 7.89 0.00 46.77 3.55
640 641 0.465097 CAGGGCATCTGTGGATGGTC 60.465 60.000 7.89 0.00 46.77 4.02
641 642 0.622738 AGGGCATCTGTGGATGGTCT 60.623 55.000 7.89 0.00 46.77 3.85
642 643 0.257039 GGGCATCTGTGGATGGTCTT 59.743 55.000 7.89 0.00 46.77 3.01
643 644 1.341383 GGGCATCTGTGGATGGTCTTT 60.341 52.381 7.89 0.00 46.77 2.52
644 645 2.019984 GGCATCTGTGGATGGTCTTTC 58.980 52.381 7.89 0.00 46.77 2.62
645 646 2.356535 GGCATCTGTGGATGGTCTTTCT 60.357 50.000 7.89 0.00 46.77 2.52
646 647 2.941720 GCATCTGTGGATGGTCTTTCTC 59.058 50.000 7.89 0.00 46.77 2.87
647 648 3.539604 CATCTGTGGATGGTCTTTCTCC 58.460 50.000 0.00 0.00 43.97 3.71
648 649 2.619931 TCTGTGGATGGTCTTTCTCCA 58.380 47.619 0.00 0.00 39.41 3.86
649 650 3.184628 TCTGTGGATGGTCTTTCTCCAT 58.815 45.455 0.00 0.00 46.78 3.41
696 697 7.184862 ACTACTAGTTTACAGGCTAGGGTTTA 58.815 38.462 0.00 0.00 39.07 2.01
891 918 3.432608 CCGGTCGAAACTGGGGTAAATAT 60.433 47.826 0.00 0.00 46.71 1.28
892 919 4.202243 CCGGTCGAAACTGGGGTAAATATA 60.202 45.833 0.00 0.00 46.71 0.86
893 920 4.746611 CGGTCGAAACTGGGGTAAATATAC 59.253 45.833 0.00 0.00 0.00 1.47
1114 1195 2.130193 GGGTTAGGGTTAGGGTTAGGG 58.870 57.143 0.00 0.00 0.00 3.53
1115 1196 2.565222 GGGTTAGGGTTAGGGTTAGGGT 60.565 54.545 0.00 0.00 0.00 4.34
1116 1197 3.192944 GGTTAGGGTTAGGGTTAGGGTT 58.807 50.000 0.00 0.00 0.00 4.11
1117 1198 4.370776 GGTTAGGGTTAGGGTTAGGGTTA 58.629 47.826 0.00 0.00 0.00 2.85
1118 1199 4.410228 GGTTAGGGTTAGGGTTAGGGTTAG 59.590 50.000 0.00 0.00 0.00 2.34
1119 1200 3.141091 AGGGTTAGGGTTAGGGTTAGG 57.859 52.381 0.00 0.00 0.00 2.69
1239 1338 5.476950 TGTAGGATTGAGGTAACCTAGGA 57.523 43.478 17.98 0.00 35.97 2.94
1266 1365 4.737578 TCTCTGTACAGTGTTAGGGTTCT 58.262 43.478 21.99 0.00 0.00 3.01
1633 1836 8.472683 TGTATTTTTGTCACTTTGGAAACTTG 57.527 30.769 0.00 0.00 0.00 3.16
1790 2004 4.740334 GCAGGAAAATGGTGTGAATTGTGT 60.740 41.667 0.00 0.00 0.00 3.72
1791 2005 5.508825 GCAGGAAAATGGTGTGAATTGTGTA 60.509 40.000 0.00 0.00 0.00 2.90
1839 2053 2.903798 CCTCCTGTTCTTCAGAGATGC 58.096 52.381 0.00 0.00 46.27 3.91
2079 2299 3.456644 TGTACCAGAAACAAGTGGAGGAA 59.543 43.478 0.00 0.00 37.27 3.36
2094 2314 4.994217 GTGGAGGAAGAAGAACTTGAGAAG 59.006 45.833 0.00 0.00 39.13 2.85
2095 2315 4.901849 TGGAGGAAGAAGAACTTGAGAAGA 59.098 41.667 0.00 0.00 39.13 2.87
2096 2316 5.366768 TGGAGGAAGAAGAACTTGAGAAGAA 59.633 40.000 0.00 0.00 39.13 2.52
2305 2552 1.735386 TGCTGAGCTGCTGAAAGATC 58.265 50.000 7.01 0.00 34.07 2.75
2313 2560 2.743183 GCTGCTGAAAGATCGGTATGGT 60.743 50.000 0.00 0.00 34.07 3.55
2338 2586 4.201763 GCAAGGAGAAGTTAGAGCAAATCG 60.202 45.833 0.00 0.00 0.00 3.34
2504 2761 4.389687 GGCCATGCATTTGAACTTTAGTTG 59.610 41.667 0.00 0.00 38.56 3.16
2795 3109 3.203059 ACTAAACCCAACCCCATCCATA 58.797 45.455 0.00 0.00 0.00 2.74
2833 3148 4.360405 CACCCCCACCCTTTCCCG 62.360 72.222 0.00 0.00 0.00 5.14
2958 3296 0.334676 CACAGAGGAGGAGGAGGAGT 59.665 60.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.767085 TGTTCTATTTAAGAAAACTACACACGG 58.233 33.333 0.00 0.00 45.78 4.94
23 24 9.772973 TGTGTATGTTGTTACTTATCTTGTTCT 57.227 29.630 0.00 0.00 0.00 3.01
26 27 9.719355 TCATGTGTATGTTGTTACTTATCTTGT 57.281 29.630 0.00 0.00 35.73 3.16
42 43 9.624697 CGGGGAATATAAATTTTCATGTGTATG 57.375 33.333 0.00 0.00 35.57 2.39
43 44 8.303876 GCGGGGAATATAAATTTTCATGTGTAT 58.696 33.333 0.00 0.00 0.00 2.29
44 45 7.285629 TGCGGGGAATATAAATTTTCATGTGTA 59.714 33.333 0.00 0.00 0.00 2.90
45 46 6.097554 TGCGGGGAATATAAATTTTCATGTGT 59.902 34.615 0.00 0.00 0.00 3.72
46 47 6.511416 TGCGGGGAATATAAATTTTCATGTG 58.489 36.000 0.00 0.00 0.00 3.21
47 48 6.723298 TGCGGGGAATATAAATTTTCATGT 57.277 33.333 0.00 0.00 0.00 3.21
48 49 7.377398 TCATGCGGGGAATATAAATTTTCATG 58.623 34.615 0.00 0.00 0.00 3.07
49 50 7.537596 TCATGCGGGGAATATAAATTTTCAT 57.462 32.000 0.00 0.00 0.00 2.57
50 51 6.968263 TCATGCGGGGAATATAAATTTTCA 57.032 33.333 0.00 0.00 0.00 2.69
51 52 7.433680 AGTTCATGCGGGGAATATAAATTTTC 58.566 34.615 0.00 0.00 0.00 2.29
52 53 7.360113 AGTTCATGCGGGGAATATAAATTTT 57.640 32.000 0.00 0.00 0.00 1.82
53 54 6.976934 AGTTCATGCGGGGAATATAAATTT 57.023 33.333 0.00 0.00 0.00 1.82
54 55 6.976934 AAGTTCATGCGGGGAATATAAATT 57.023 33.333 0.00 0.00 0.00 1.82
55 56 8.650143 AATAAGTTCATGCGGGGAATATAAAT 57.350 30.769 0.00 0.00 0.00 1.40
56 57 8.472007 AAATAAGTTCATGCGGGGAATATAAA 57.528 30.769 0.00 0.00 0.00 1.40
57 58 8.356657 CAAAATAAGTTCATGCGGGGAATATAA 58.643 33.333 0.00 0.00 0.00 0.98
58 59 7.721842 TCAAAATAAGTTCATGCGGGGAATATA 59.278 33.333 0.00 0.00 0.00 0.86
59 60 6.549364 TCAAAATAAGTTCATGCGGGGAATAT 59.451 34.615 0.00 0.00 0.00 1.28
60 61 5.888724 TCAAAATAAGTTCATGCGGGGAATA 59.111 36.000 0.00 0.00 0.00 1.75
61 62 4.709397 TCAAAATAAGTTCATGCGGGGAAT 59.291 37.500 0.00 0.00 0.00 3.01
62 63 4.082845 TCAAAATAAGTTCATGCGGGGAA 58.917 39.130 0.00 0.00 0.00 3.97
63 64 3.691575 TCAAAATAAGTTCATGCGGGGA 58.308 40.909 0.00 0.00 0.00 4.81
64 65 4.082245 AGTTCAAAATAAGTTCATGCGGGG 60.082 41.667 0.00 0.00 0.00 5.73
65 66 4.858692 CAGTTCAAAATAAGTTCATGCGGG 59.141 41.667 0.00 0.00 0.00 6.13
66 67 5.343058 CACAGTTCAAAATAAGTTCATGCGG 59.657 40.000 0.00 0.00 0.00 5.69
67 68 5.914635 ACACAGTTCAAAATAAGTTCATGCG 59.085 36.000 0.00 0.00 0.00 4.73
68 69 6.917477 TCACACAGTTCAAAATAAGTTCATGC 59.083 34.615 0.00 0.00 0.00 4.06
69 70 8.745837 GTTCACACAGTTCAAAATAAGTTCATG 58.254 33.333 0.00 0.00 0.00 3.07
70 71 8.465999 TGTTCACACAGTTCAAAATAAGTTCAT 58.534 29.630 0.00 0.00 0.00 2.57
71 72 7.821652 TGTTCACACAGTTCAAAATAAGTTCA 58.178 30.769 0.00 0.00 0.00 3.18
72 73 8.856490 ATGTTCACACAGTTCAAAATAAGTTC 57.144 30.769 0.00 0.00 35.94 3.01
73 74 9.651913 AAATGTTCACACAGTTCAAAATAAGTT 57.348 25.926 0.00 0.00 36.46 2.66
74 75 9.651913 AAAATGTTCACACAGTTCAAAATAAGT 57.348 25.926 0.00 0.00 40.30 2.24
82 83 8.386606 GCATTTTAAAAATGTTCACACAGTTCA 58.613 29.630 4.44 0.00 40.30 3.18
83 84 8.386606 TGCATTTTAAAAATGTTCACACAGTTC 58.613 29.630 4.44 0.00 40.30 3.01
84 85 8.261492 TGCATTTTAAAAATGTTCACACAGTT 57.739 26.923 4.44 0.00 43.01 3.16
85 86 7.840342 TGCATTTTAAAAATGTTCACACAGT 57.160 28.000 4.44 0.00 35.94 3.55
86 87 8.389603 AGTTGCATTTTAAAAATGTTCACACAG 58.610 29.630 4.44 0.00 35.94 3.66
87 88 8.261492 AGTTGCATTTTAAAAATGTTCACACA 57.739 26.923 4.44 0.00 37.31 3.72
90 91 9.352163 CGTAAGTTGCATTTTAAAAATGTTCAC 57.648 29.630 4.44 0.00 0.00 3.18
176 177 7.840342 AACTTGTTCATGCAATACACAAAAA 57.160 28.000 0.00 0.00 29.88 1.94
177 178 7.840342 AAACTTGTTCATGCAATACACAAAA 57.160 28.000 0.00 0.00 29.88 2.44
178 179 7.840342 AAAACTTGTTCATGCAATACACAAA 57.160 28.000 0.00 0.00 29.88 2.83
179 180 8.932945 TTAAAACTTGTTCATGCAATACACAA 57.067 26.923 0.00 0.00 0.00 3.33
180 181 8.932945 TTTAAAACTTGTTCATGCAATACACA 57.067 26.923 0.00 0.00 0.00 3.72
181 182 9.796062 CATTTAAAACTTGTTCATGCAATACAC 57.204 29.630 0.00 0.00 0.00 2.90
182 183 8.494347 GCATTTAAAACTTGTTCATGCAATACA 58.506 29.630 0.00 0.00 36.41 2.29
183 184 7.956943 GGCATTTAAAACTTGTTCATGCAATAC 59.043 33.333 15.33 0.00 37.81 1.89
184 185 7.658982 TGGCATTTAAAACTTGTTCATGCAATA 59.341 29.630 15.33 0.00 37.81 1.90
185 186 6.485984 TGGCATTTAAAACTTGTTCATGCAAT 59.514 30.769 15.33 0.00 37.81 3.56
186 187 5.819379 TGGCATTTAAAACTTGTTCATGCAA 59.181 32.000 15.33 7.20 37.81 4.08
187 188 5.236047 GTGGCATTTAAAACTTGTTCATGCA 59.764 36.000 15.33 0.00 37.81 3.96
188 189 5.236047 TGTGGCATTTAAAACTTGTTCATGC 59.764 36.000 0.00 0.00 35.79 4.06
189 190 6.257411 TGTGTGGCATTTAAAACTTGTTCATG 59.743 34.615 0.00 0.00 0.00 3.07
190 191 6.257630 GTGTGTGGCATTTAAAACTTGTTCAT 59.742 34.615 0.00 0.00 0.00 2.57
191 192 5.578727 GTGTGTGGCATTTAAAACTTGTTCA 59.421 36.000 0.00 0.00 0.00 3.18
192 193 5.578727 TGTGTGTGGCATTTAAAACTTGTTC 59.421 36.000 0.00 0.00 0.00 3.18
193 194 5.482908 TGTGTGTGGCATTTAAAACTTGTT 58.517 33.333 0.00 0.00 0.00 2.83
194 195 5.078411 TGTGTGTGGCATTTAAAACTTGT 57.922 34.783 0.00 0.00 0.00 3.16
195 196 6.601741 ATTGTGTGTGGCATTTAAAACTTG 57.398 33.333 0.00 0.00 0.00 3.16
196 197 7.721402 TCTATTGTGTGTGGCATTTAAAACTT 58.279 30.769 0.00 0.00 0.00 2.66
197 198 7.283625 TCTATTGTGTGTGGCATTTAAAACT 57.716 32.000 0.00 0.00 0.00 2.66
198 199 7.938563 TTCTATTGTGTGTGGCATTTAAAAC 57.061 32.000 0.00 0.00 0.00 2.43
203 204 9.189156 ACTTATATTCTATTGTGTGTGGCATTT 57.811 29.630 0.00 0.00 0.00 2.32
204 205 8.752005 ACTTATATTCTATTGTGTGTGGCATT 57.248 30.769 0.00 0.00 0.00 3.56
205 206 8.623903 CAACTTATATTCTATTGTGTGTGGCAT 58.376 33.333 0.00 0.00 0.00 4.40
206 207 7.609918 ACAACTTATATTCTATTGTGTGTGGCA 59.390 33.333 0.00 0.00 32.42 4.92
207 208 7.985476 ACAACTTATATTCTATTGTGTGTGGC 58.015 34.615 0.00 0.00 32.42 5.01
246 247 9.195411 TGAGCATGCTTAACTTTGAAATAAAAG 57.805 29.630 23.61 0.00 41.91 2.27
247 248 9.195411 CTGAGCATGCTTAACTTTGAAATAAAA 57.805 29.630 23.61 0.00 0.00 1.52
248 249 8.359642 ACTGAGCATGCTTAACTTTGAAATAAA 58.640 29.630 23.61 0.00 0.00 1.40
249 250 7.885297 ACTGAGCATGCTTAACTTTGAAATAA 58.115 30.769 23.61 0.00 0.00 1.40
250 251 7.452880 ACTGAGCATGCTTAACTTTGAAATA 57.547 32.000 23.61 0.00 0.00 1.40
251 252 6.336842 ACTGAGCATGCTTAACTTTGAAAT 57.663 33.333 23.61 0.00 0.00 2.17
252 253 5.772825 ACTGAGCATGCTTAACTTTGAAA 57.227 34.783 23.61 0.00 0.00 2.69
253 254 5.772825 AACTGAGCATGCTTAACTTTGAA 57.227 34.783 23.61 0.00 0.00 2.69
254 255 5.299028 TCAAACTGAGCATGCTTAACTTTGA 59.701 36.000 25.81 25.81 0.00 2.69
255 256 5.522456 TCAAACTGAGCATGCTTAACTTTG 58.478 37.500 23.61 23.50 0.00 2.77
256 257 5.772825 TCAAACTGAGCATGCTTAACTTT 57.227 34.783 23.61 14.25 0.00 2.66
257 258 5.766222 CTTCAAACTGAGCATGCTTAACTT 58.234 37.500 23.61 10.54 0.00 2.66
258 259 4.320788 GCTTCAAACTGAGCATGCTTAACT 60.321 41.667 23.61 4.32 0.00 2.24
259 260 3.916776 GCTTCAAACTGAGCATGCTTAAC 59.083 43.478 23.61 9.97 0.00 2.01
260 261 3.569277 TGCTTCAAACTGAGCATGCTTAA 59.431 39.130 23.61 12.67 29.93 1.85
261 262 3.148412 TGCTTCAAACTGAGCATGCTTA 58.852 40.909 23.61 17.59 29.93 3.09
262 263 1.958579 TGCTTCAAACTGAGCATGCTT 59.041 42.857 23.61 2.39 29.93 3.91
263 264 1.612676 TGCTTCAAACTGAGCATGCT 58.387 45.000 22.92 22.92 29.93 3.79
264 265 2.427232 TTGCTTCAAACTGAGCATGC 57.573 45.000 10.51 10.51 33.16 4.06
265 266 4.986034 TGAAATTGCTTCAAACTGAGCATG 59.014 37.500 0.00 0.00 41.21 4.06
266 267 5.204409 TGAAATTGCTTCAAACTGAGCAT 57.796 34.783 0.00 0.00 41.21 3.79
267 268 4.500205 CCTGAAATTGCTTCAAACTGAGCA 60.500 41.667 0.00 0.00 43.54 4.26
268 269 3.985925 CCTGAAATTGCTTCAAACTGAGC 59.014 43.478 0.00 0.00 43.54 4.26
269 270 5.443185 TCCTGAAATTGCTTCAAACTGAG 57.557 39.130 0.00 0.00 43.54 3.35
270 271 5.279106 CCATCCTGAAATTGCTTCAAACTGA 60.279 40.000 0.00 0.00 43.54 3.41
271 272 4.927425 CCATCCTGAAATTGCTTCAAACTG 59.073 41.667 0.00 0.00 43.54 3.16
272 273 4.020839 CCCATCCTGAAATTGCTTCAAACT 60.021 41.667 0.00 0.00 43.54 2.66
273 274 4.248058 CCCATCCTGAAATTGCTTCAAAC 58.752 43.478 0.00 0.00 43.54 2.93
274 275 3.903090 ACCCATCCTGAAATTGCTTCAAA 59.097 39.130 0.00 0.00 43.54 2.69
275 276 3.258872 CACCCATCCTGAAATTGCTTCAA 59.741 43.478 0.00 0.00 43.54 2.69
276 277 2.827322 CACCCATCCTGAAATTGCTTCA 59.173 45.455 0.00 0.00 41.93 3.02
277 278 3.091545 TCACCCATCCTGAAATTGCTTC 58.908 45.455 0.00 0.00 34.31 3.86
278 279 2.827921 GTCACCCATCCTGAAATTGCTT 59.172 45.455 0.00 0.00 0.00 3.91
279 280 2.042162 AGTCACCCATCCTGAAATTGCT 59.958 45.455 0.00 0.00 0.00 3.91
280 281 2.165030 CAGTCACCCATCCTGAAATTGC 59.835 50.000 0.00 0.00 0.00 3.56
281 282 2.756760 CCAGTCACCCATCCTGAAATTG 59.243 50.000 0.00 0.00 0.00 2.32
282 283 2.885554 GCCAGTCACCCATCCTGAAATT 60.886 50.000 0.00 0.00 0.00 1.82
283 284 1.341383 GCCAGTCACCCATCCTGAAAT 60.341 52.381 0.00 0.00 0.00 2.17
284 285 0.038166 GCCAGTCACCCATCCTGAAA 59.962 55.000 0.00 0.00 0.00 2.69
285 286 0.842030 AGCCAGTCACCCATCCTGAA 60.842 55.000 0.00 0.00 0.00 3.02
286 287 1.229625 AGCCAGTCACCCATCCTGA 60.230 57.895 0.00 0.00 0.00 3.86
287 288 1.077930 CAGCCAGTCACCCATCCTG 60.078 63.158 0.00 0.00 0.00 3.86
288 289 1.229625 TCAGCCAGTCACCCATCCT 60.230 57.895 0.00 0.00 0.00 3.24
289 290 1.222936 CTCAGCCAGTCACCCATCC 59.777 63.158 0.00 0.00 0.00 3.51
290 291 0.615331 TTCTCAGCCAGTCACCCATC 59.385 55.000 0.00 0.00 0.00 3.51
291 292 1.293062 ATTCTCAGCCAGTCACCCAT 58.707 50.000 0.00 0.00 0.00 4.00
292 293 1.951209 TATTCTCAGCCAGTCACCCA 58.049 50.000 0.00 0.00 0.00 4.51
293 294 2.486191 CCATATTCTCAGCCAGTCACCC 60.486 54.545 0.00 0.00 0.00 4.61
294 295 2.171448 ACCATATTCTCAGCCAGTCACC 59.829 50.000 0.00 0.00 0.00 4.02
295 296 3.550437 ACCATATTCTCAGCCAGTCAC 57.450 47.619 0.00 0.00 0.00 3.67
296 297 3.519107 TCAACCATATTCTCAGCCAGTCA 59.481 43.478 0.00 0.00 0.00 3.41
297 298 4.125703 CTCAACCATATTCTCAGCCAGTC 58.874 47.826 0.00 0.00 0.00 3.51
298 299 3.118112 CCTCAACCATATTCTCAGCCAGT 60.118 47.826 0.00 0.00 0.00 4.00
299 300 3.118112 ACCTCAACCATATTCTCAGCCAG 60.118 47.826 0.00 0.00 0.00 4.85
300 301 2.846206 ACCTCAACCATATTCTCAGCCA 59.154 45.455 0.00 0.00 0.00 4.75
301 302 3.209410 CACCTCAACCATATTCTCAGCC 58.791 50.000 0.00 0.00 0.00 4.85
302 303 2.615912 GCACCTCAACCATATTCTCAGC 59.384 50.000 0.00 0.00 0.00 4.26
303 304 2.868583 CGCACCTCAACCATATTCTCAG 59.131 50.000 0.00 0.00 0.00 3.35
304 305 2.905075 CGCACCTCAACCATATTCTCA 58.095 47.619 0.00 0.00 0.00 3.27
305 306 1.599542 GCGCACCTCAACCATATTCTC 59.400 52.381 0.30 0.00 0.00 2.87
306 307 1.065491 TGCGCACCTCAACCATATTCT 60.065 47.619 5.66 0.00 0.00 2.40
307 308 1.064060 GTGCGCACCTCAACCATATTC 59.936 52.381 30.12 0.00 0.00 1.75
308 309 1.094785 GTGCGCACCTCAACCATATT 58.905 50.000 30.12 0.00 0.00 1.28
309 310 1.089481 CGTGCGCACCTCAACCATAT 61.089 55.000 33.23 0.00 0.00 1.78
310 311 1.739929 CGTGCGCACCTCAACCATA 60.740 57.895 33.23 0.00 0.00 2.74
311 312 3.049674 CGTGCGCACCTCAACCAT 61.050 61.111 33.23 0.00 0.00 3.55
312 313 4.228567 TCGTGCGCACCTCAACCA 62.229 61.111 33.23 6.97 0.00 3.67
313 314 3.414700 CTCGTGCGCACCTCAACC 61.415 66.667 33.23 8.48 0.00 3.77
314 315 2.661866 ACTCGTGCGCACCTCAAC 60.662 61.111 33.23 9.27 0.00 3.18
315 316 2.636778 TTCACTCGTGCGCACCTCAA 62.637 55.000 33.23 16.44 0.00 3.02
316 317 3.145422 TTCACTCGTGCGCACCTCA 62.145 57.895 33.23 17.12 0.00 3.86
317 318 2.355837 TTCACTCGTGCGCACCTC 60.356 61.111 33.23 10.90 0.00 3.85
318 319 2.356313 CTTCACTCGTGCGCACCT 60.356 61.111 33.23 14.29 0.00 4.00
319 320 2.355837 TCTTCACTCGTGCGCACC 60.356 61.111 33.23 16.56 0.00 5.01
320 321 1.487452 TTGTCTTCACTCGTGCGCAC 61.487 55.000 30.42 30.42 0.00 5.34
321 322 0.808060 TTTGTCTTCACTCGTGCGCA 60.808 50.000 5.66 5.66 0.00 6.09
322 323 0.512952 ATTTGTCTTCACTCGTGCGC 59.487 50.000 0.00 0.00 0.00 6.09
323 324 2.949714 AATTTGTCTTCACTCGTGCG 57.050 45.000 0.00 0.00 0.00 5.34
324 325 4.091424 GCATAATTTGTCTTCACTCGTGC 58.909 43.478 0.00 0.00 0.00 5.34
325 326 5.281693 TGCATAATTTGTCTTCACTCGTG 57.718 39.130 0.00 0.00 0.00 4.35
326 327 4.393062 CCTGCATAATTTGTCTTCACTCGT 59.607 41.667 0.00 0.00 0.00 4.18
327 328 4.631377 TCCTGCATAATTTGTCTTCACTCG 59.369 41.667 0.00 0.00 0.00 4.18
328 329 6.500684 TTCCTGCATAATTTGTCTTCACTC 57.499 37.500 0.00 0.00 0.00 3.51
329 330 6.716628 TCTTTCCTGCATAATTTGTCTTCACT 59.283 34.615 0.00 0.00 0.00 3.41
330 331 6.803807 GTCTTTCCTGCATAATTTGTCTTCAC 59.196 38.462 0.00 0.00 0.00 3.18
331 332 6.716628 AGTCTTTCCTGCATAATTTGTCTTCA 59.283 34.615 0.00 0.00 0.00 3.02
332 333 7.150783 AGTCTTTCCTGCATAATTTGTCTTC 57.849 36.000 0.00 0.00 0.00 2.87
333 334 7.885399 ACTAGTCTTTCCTGCATAATTTGTCTT 59.115 33.333 0.00 0.00 0.00 3.01
334 335 7.335422 CACTAGTCTTTCCTGCATAATTTGTCT 59.665 37.037 0.00 0.00 0.00 3.41
335 336 7.119846 ACACTAGTCTTTCCTGCATAATTTGTC 59.880 37.037 0.00 0.00 0.00 3.18
336 337 6.942576 ACACTAGTCTTTCCTGCATAATTTGT 59.057 34.615 0.00 0.00 0.00 2.83
337 338 7.383102 ACACTAGTCTTTCCTGCATAATTTG 57.617 36.000 0.00 0.00 0.00 2.32
338 339 7.665559 TCAACACTAGTCTTTCCTGCATAATTT 59.334 33.333 0.00 0.00 0.00 1.82
339 340 7.168219 TCAACACTAGTCTTTCCTGCATAATT 58.832 34.615 0.00 0.00 0.00 1.40
340 341 6.711277 TCAACACTAGTCTTTCCTGCATAAT 58.289 36.000 0.00 0.00 0.00 1.28
341 342 6.109156 TCAACACTAGTCTTTCCTGCATAA 57.891 37.500 0.00 0.00 0.00 1.90
342 343 5.738619 TCAACACTAGTCTTTCCTGCATA 57.261 39.130 0.00 0.00 0.00 3.14
343 344 4.623932 TCAACACTAGTCTTTCCTGCAT 57.376 40.909 0.00 0.00 0.00 3.96
344 345 4.284490 AGATCAACACTAGTCTTTCCTGCA 59.716 41.667 0.00 0.00 0.00 4.41
345 346 4.629200 CAGATCAACACTAGTCTTTCCTGC 59.371 45.833 0.00 0.00 0.00 4.85
346 347 5.636965 CACAGATCAACACTAGTCTTTCCTG 59.363 44.000 0.00 0.00 0.00 3.86
347 348 5.279708 CCACAGATCAACACTAGTCTTTCCT 60.280 44.000 0.00 0.00 0.00 3.36
348 349 4.932200 CCACAGATCAACACTAGTCTTTCC 59.068 45.833 0.00 0.00 0.00 3.13
349 350 5.784177 TCCACAGATCAACACTAGTCTTTC 58.216 41.667 0.00 0.00 0.00 2.62
350 351 5.788450 CTCCACAGATCAACACTAGTCTTT 58.212 41.667 0.00 0.00 0.00 2.52
351 352 4.322349 GCTCCACAGATCAACACTAGTCTT 60.322 45.833 0.00 0.00 0.00 3.01
352 353 3.194542 GCTCCACAGATCAACACTAGTCT 59.805 47.826 0.00 0.00 0.00 3.24
353 354 3.516615 GCTCCACAGATCAACACTAGTC 58.483 50.000 0.00 0.00 0.00 2.59
354 355 2.234908 GGCTCCACAGATCAACACTAGT 59.765 50.000 0.00 0.00 0.00 2.57
355 356 2.234661 TGGCTCCACAGATCAACACTAG 59.765 50.000 0.00 0.00 0.00 2.57
356 357 2.234661 CTGGCTCCACAGATCAACACTA 59.765 50.000 0.00 0.00 40.97 2.74
357 358 1.002888 CTGGCTCCACAGATCAACACT 59.997 52.381 0.00 0.00 40.97 3.55
358 359 1.271054 ACTGGCTCCACAGATCAACAC 60.271 52.381 0.00 0.00 40.97 3.32
359 360 1.002430 GACTGGCTCCACAGATCAACA 59.998 52.381 0.00 0.00 40.97 3.33
360 361 1.277557 AGACTGGCTCCACAGATCAAC 59.722 52.381 0.00 0.00 40.97 3.18
361 362 1.649321 AGACTGGCTCCACAGATCAA 58.351 50.000 0.00 0.00 40.97 2.57
362 363 2.291865 ACTAGACTGGCTCCACAGATCA 60.292 50.000 0.00 0.00 40.97 2.92
363 364 2.383855 ACTAGACTGGCTCCACAGATC 58.616 52.381 0.00 0.00 40.97 2.75
364 365 2.541233 ACTAGACTGGCTCCACAGAT 57.459 50.000 0.00 0.00 40.97 2.90
365 366 2.171840 GAACTAGACTGGCTCCACAGA 58.828 52.381 0.00 0.00 40.97 3.41
366 367 1.205893 GGAACTAGACTGGCTCCACAG 59.794 57.143 3.52 0.00 44.03 3.66
367 368 1.267121 GGAACTAGACTGGCTCCACA 58.733 55.000 3.52 0.00 0.00 4.17
368 369 0.537653 GGGAACTAGACTGGCTCCAC 59.462 60.000 10.13 0.00 0.00 4.02
369 370 0.970937 CGGGAACTAGACTGGCTCCA 60.971 60.000 10.13 0.00 0.00 3.86
370 371 0.971447 ACGGGAACTAGACTGGCTCC 60.971 60.000 0.00 0.00 0.00 4.70
371 372 0.456628 GACGGGAACTAGACTGGCTC 59.543 60.000 0.00 0.00 0.00 4.70
372 373 0.251653 TGACGGGAACTAGACTGGCT 60.252 55.000 0.00 0.00 0.00 4.75
373 374 0.606604 TTGACGGGAACTAGACTGGC 59.393 55.000 0.00 0.00 0.00 4.85
374 375 2.164624 CTCTTGACGGGAACTAGACTGG 59.835 54.545 0.00 0.00 0.00 4.00
375 376 2.820787 ACTCTTGACGGGAACTAGACTG 59.179 50.000 0.00 0.00 0.00 3.51
376 377 3.157750 ACTCTTGACGGGAACTAGACT 57.842 47.619 0.00 0.00 0.00 3.24
377 378 4.671250 CGTTACTCTTGACGGGAACTAGAC 60.671 50.000 0.00 0.00 35.74 2.59
378 379 3.438087 CGTTACTCTTGACGGGAACTAGA 59.562 47.826 0.00 0.00 35.74 2.43
379 380 3.756069 CGTTACTCTTGACGGGAACTAG 58.244 50.000 0.00 0.00 35.74 2.57
380 381 3.837213 CGTTACTCTTGACGGGAACTA 57.163 47.619 0.00 0.00 35.74 2.24
381 382 2.719426 CGTTACTCTTGACGGGAACT 57.281 50.000 0.00 0.00 35.74 3.01
387 388 2.701073 ACTGACCGTTACTCTTGACG 57.299 50.000 0.00 0.00 38.90 4.35
388 389 3.910767 CGTTACTGACCGTTACTCTTGAC 59.089 47.826 0.00 0.00 0.00 3.18
389 390 3.058016 CCGTTACTGACCGTTACTCTTGA 60.058 47.826 0.00 0.00 0.00 3.02
390 391 3.240069 CCGTTACTGACCGTTACTCTTG 58.760 50.000 0.00 0.00 0.00 3.02
391 392 2.352127 GCCGTTACTGACCGTTACTCTT 60.352 50.000 0.00 0.00 0.00 2.85
392 393 1.200948 GCCGTTACTGACCGTTACTCT 59.799 52.381 0.00 0.00 0.00 3.24
393 394 1.622232 GCCGTTACTGACCGTTACTC 58.378 55.000 0.00 0.00 0.00 2.59
394 395 0.109597 CGCCGTTACTGACCGTTACT 60.110 55.000 0.00 0.00 0.00 2.24
395 396 1.072666 CCGCCGTTACTGACCGTTAC 61.073 60.000 0.00 0.00 0.00 2.50
396 397 1.212490 CCGCCGTTACTGACCGTTA 59.788 57.895 0.00 0.00 0.00 3.18
397 398 2.048877 CCGCCGTTACTGACCGTT 60.049 61.111 0.00 0.00 0.00 4.44
398 399 4.060038 CCCGCCGTTACTGACCGT 62.060 66.667 0.00 0.00 0.00 4.83
399 400 4.060038 ACCCGCCGTTACTGACCG 62.060 66.667 0.00 0.00 0.00 4.79
400 401 2.433664 CACCCGCCGTTACTGACC 60.434 66.667 0.00 0.00 0.00 4.02
401 402 2.025418 CACACCCGCCGTTACTGAC 61.025 63.158 0.00 0.00 0.00 3.51
402 403 2.340809 CACACCCGCCGTTACTGA 59.659 61.111 0.00 0.00 0.00 3.41
403 404 2.025418 GACACACCCGCCGTTACTG 61.025 63.158 0.00 0.00 0.00 2.74
404 405 2.341176 GACACACCCGCCGTTACT 59.659 61.111 0.00 0.00 0.00 2.24
405 406 2.739671 GGACACACCCGCCGTTAC 60.740 66.667 0.00 0.00 0.00 2.50
406 407 4.360964 CGGACACACCCGCCGTTA 62.361 66.667 0.00 0.00 43.25 3.18
413 414 4.922026 AACGCCACGGACACACCC 62.922 66.667 0.00 0.00 34.64 4.61
414 415 2.888998 GAAACGCCACGGACACACC 61.889 63.158 0.00 0.00 0.00 4.16
415 416 2.101209 CTGAAACGCCACGGACACAC 62.101 60.000 0.00 0.00 0.00 3.82
416 417 1.885388 CTGAAACGCCACGGACACA 60.885 57.895 0.00 0.00 0.00 3.72
417 418 1.593209 TCTGAAACGCCACGGACAC 60.593 57.895 0.00 0.00 0.00 3.67
418 419 1.593209 GTCTGAAACGCCACGGACA 60.593 57.895 0.00 0.00 40.72 4.02
419 420 2.654912 CGTCTGAAACGCCACGGAC 61.655 63.158 0.00 0.00 45.76 4.79
420 421 2.355363 CGTCTGAAACGCCACGGA 60.355 61.111 0.00 0.00 45.76 4.69
428 429 0.716108 CATGCGTCCTCGTCTGAAAC 59.284 55.000 0.00 0.00 39.49 2.78
429 430 1.014044 GCATGCGTCCTCGTCTGAAA 61.014 55.000 0.00 0.00 39.49 2.69
430 431 1.446099 GCATGCGTCCTCGTCTGAA 60.446 57.895 0.00 0.00 39.49 3.02
431 432 2.181777 GCATGCGTCCTCGTCTGA 59.818 61.111 0.00 0.00 39.49 3.27
432 433 2.887568 GGCATGCGTCCTCGTCTG 60.888 66.667 12.44 0.00 39.49 3.51
433 434 4.148825 GGGCATGCGTCCTCGTCT 62.149 66.667 12.44 0.00 39.49 4.18
439 440 1.961277 CGGATAAGGGCATGCGTCC 60.961 63.158 12.44 8.35 35.32 4.79
440 441 1.961277 CCGGATAAGGGCATGCGTC 60.961 63.158 12.44 6.58 37.98 5.19
441 442 2.111043 CCGGATAAGGGCATGCGT 59.889 61.111 12.44 1.72 37.98 5.24
442 443 2.669569 CCCGGATAAGGGCATGCG 60.670 66.667 12.44 0.00 45.72 4.73
449 450 1.873591 CGATTTTGCTCCCGGATAAGG 59.126 52.381 0.73 0.00 0.00 2.69
450 451 2.802816 CTCGATTTTGCTCCCGGATAAG 59.197 50.000 0.73 0.00 0.00 1.73
451 452 2.833794 CTCGATTTTGCTCCCGGATAA 58.166 47.619 0.73 0.00 0.00 1.75
452 453 1.540363 GCTCGATTTTGCTCCCGGATA 60.540 52.381 0.73 0.00 0.00 2.59
453 454 0.815615 GCTCGATTTTGCTCCCGGAT 60.816 55.000 0.73 0.00 0.00 4.18
454 455 1.449601 GCTCGATTTTGCTCCCGGA 60.450 57.895 0.73 0.00 0.00 5.14
455 456 2.813179 CGCTCGATTTTGCTCCCGG 61.813 63.158 0.00 0.00 0.00 5.73
456 457 2.703409 CGCTCGATTTTGCTCCCG 59.297 61.111 0.00 0.00 0.00 5.14
457 458 1.706287 GACCGCTCGATTTTGCTCCC 61.706 60.000 0.00 0.00 0.00 4.30
458 459 0.741221 AGACCGCTCGATTTTGCTCC 60.741 55.000 0.00 0.00 0.00 4.70
459 460 1.079503 AAGACCGCTCGATTTTGCTC 58.920 50.000 0.00 0.00 0.00 4.26
460 461 0.798776 CAAGACCGCTCGATTTTGCT 59.201 50.000 0.00 0.00 0.00 3.91
461 462 0.517316 ACAAGACCGCTCGATTTTGC 59.483 50.000 0.00 0.00 0.00 3.68
462 463 2.093783 GGTACAAGACCGCTCGATTTTG 59.906 50.000 0.00 0.00 38.87 2.44
463 464 2.344025 GGTACAAGACCGCTCGATTTT 58.656 47.619 0.00 0.00 38.87 1.82
464 465 2.005971 GGTACAAGACCGCTCGATTT 57.994 50.000 0.00 0.00 38.87 2.17
465 466 3.735181 GGTACAAGACCGCTCGATT 57.265 52.632 0.00 0.00 38.87 3.34
479 480 3.460648 GGCAGTCTGACCATGGTAC 57.539 57.895 19.80 13.08 0.00 3.34
487 488 2.273449 CCATGGGGGCAGTCTGAC 59.727 66.667 2.85 0.00 0.00 3.51
497 498 2.449322 CCTCCTCCTCCCATGGGG 60.449 72.222 30.93 20.22 46.11 4.96
498 499 1.768077 GTCCTCCTCCTCCCATGGG 60.768 68.421 26.30 26.30 0.00 4.00
499 500 0.621571 TTGTCCTCCTCCTCCCATGG 60.622 60.000 4.14 4.14 0.00 3.66
500 501 0.543749 GTTGTCCTCCTCCTCCCATG 59.456 60.000 0.00 0.00 0.00 3.66
501 502 0.978146 CGTTGTCCTCCTCCTCCCAT 60.978 60.000 0.00 0.00 0.00 4.00
502 503 1.609501 CGTTGTCCTCCTCCTCCCA 60.610 63.158 0.00 0.00 0.00 4.37
503 504 1.305046 TCGTTGTCCTCCTCCTCCC 60.305 63.158 0.00 0.00 0.00 4.30
504 505 1.891616 GTCGTTGTCCTCCTCCTCC 59.108 63.158 0.00 0.00 0.00 4.30
505 506 0.959372 TCGTCGTTGTCCTCCTCCTC 60.959 60.000 0.00 0.00 0.00 3.71
506 507 0.961358 CTCGTCGTTGTCCTCCTCCT 60.961 60.000 0.00 0.00 0.00 3.69
507 508 1.242665 ACTCGTCGTTGTCCTCCTCC 61.243 60.000 0.00 0.00 0.00 4.30
508 509 0.168568 GACTCGTCGTTGTCCTCCTC 59.831 60.000 9.01 0.00 0.00 3.71
509 510 0.536687 TGACTCGTCGTTGTCCTCCT 60.537 55.000 14.77 0.00 32.67 3.69
510 511 0.109689 CTGACTCGTCGTTGTCCTCC 60.110 60.000 14.77 0.00 32.67 4.30
511 512 0.873054 TCTGACTCGTCGTTGTCCTC 59.127 55.000 14.77 0.00 32.67 3.71
512 513 0.592148 GTCTGACTCGTCGTTGTCCT 59.408 55.000 14.77 0.00 32.67 3.85
513 514 0.309922 TGTCTGACTCGTCGTTGTCC 59.690 55.000 9.51 4.74 32.67 4.02
514 515 1.779724 GTTGTCTGACTCGTCGTTGTC 59.220 52.381 9.51 11.96 0.00 3.18
515 516 1.404391 AGTTGTCTGACTCGTCGTTGT 59.596 47.619 9.51 0.00 0.00 3.32
516 517 2.044860 GAGTTGTCTGACTCGTCGTTG 58.955 52.381 9.51 0.00 36.97 4.10
517 518 1.001597 GGAGTTGTCTGACTCGTCGTT 60.002 52.381 9.51 0.00 45.53 3.85
518 519 0.592148 GGAGTTGTCTGACTCGTCGT 59.408 55.000 9.51 0.00 45.53 4.34
519 520 0.452950 CGGAGTTGTCTGACTCGTCG 60.453 60.000 9.51 7.85 45.53 5.12
520 521 0.109689 CCGGAGTTGTCTGACTCGTC 60.110 60.000 9.51 2.76 45.53 4.20
521 522 1.957562 CCGGAGTTGTCTGACTCGT 59.042 57.895 9.51 0.00 45.53 4.18
522 523 1.444553 GCCGGAGTTGTCTGACTCG 60.445 63.158 5.05 5.47 45.53 4.18
523 524 1.444553 CGCCGGAGTTGTCTGACTC 60.445 63.158 5.05 2.72 44.20 3.36
524 525 1.251527 ATCGCCGGAGTTGTCTGACT 61.252 55.000 5.05 0.00 0.00 3.41
525 526 1.078759 CATCGCCGGAGTTGTCTGAC 61.079 60.000 5.05 0.00 0.00 3.51
526 527 1.215382 CATCGCCGGAGTTGTCTGA 59.785 57.895 5.05 0.00 0.00 3.27
527 528 0.389817 TTCATCGCCGGAGTTGTCTG 60.390 55.000 5.05 0.00 0.00 3.51
528 529 0.389948 GTTCATCGCCGGAGTTGTCT 60.390 55.000 5.05 0.00 0.00 3.41
529 530 0.669318 TGTTCATCGCCGGAGTTGTC 60.669 55.000 5.05 6.46 0.00 3.18
530 531 0.036388 ATGTTCATCGCCGGAGTTGT 60.036 50.000 5.05 0.00 0.00 3.32
531 532 1.934589 TATGTTCATCGCCGGAGTTG 58.065 50.000 5.05 8.00 0.00 3.16
532 533 2.548067 GGATATGTTCATCGCCGGAGTT 60.548 50.000 5.05 0.00 0.00 3.01
533 534 1.000955 GGATATGTTCATCGCCGGAGT 59.999 52.381 5.05 0.00 0.00 3.85
534 535 1.000843 TGGATATGTTCATCGCCGGAG 59.999 52.381 5.05 0.00 0.00 4.63
535 536 1.000843 CTGGATATGTTCATCGCCGGA 59.999 52.381 5.05 0.00 0.00 5.14
536 537 1.432514 CTGGATATGTTCATCGCCGG 58.567 55.000 0.00 0.00 0.00 6.13
537 538 0.792640 GCTGGATATGTTCATCGCCG 59.207 55.000 0.00 0.00 0.00 6.46
538 539 2.072298 GAGCTGGATATGTTCATCGCC 58.928 52.381 0.00 0.00 0.00 5.54
539 540 1.723542 CGAGCTGGATATGTTCATCGC 59.276 52.381 0.00 0.00 0.00 4.58
540 541 3.288809 TCGAGCTGGATATGTTCATCG 57.711 47.619 0.00 0.00 0.00 3.84
541 542 4.180057 GGATCGAGCTGGATATGTTCATC 58.820 47.826 11.58 0.00 0.00 2.92
542 543 3.580022 TGGATCGAGCTGGATATGTTCAT 59.420 43.478 11.58 0.00 0.00 2.57
543 544 2.965147 TGGATCGAGCTGGATATGTTCA 59.035 45.455 11.58 3.23 0.00 3.18
544 545 3.667497 TGGATCGAGCTGGATATGTTC 57.333 47.619 11.58 0.00 0.00 3.18
545 546 4.630644 AATGGATCGAGCTGGATATGTT 57.369 40.909 11.58 4.00 0.00 2.71
546 547 4.630644 AAATGGATCGAGCTGGATATGT 57.369 40.909 11.58 0.00 0.00 2.29
547 548 4.758674 ACAAAATGGATCGAGCTGGATATG 59.241 41.667 11.58 6.83 0.00 1.78
548 549 4.758674 CACAAAATGGATCGAGCTGGATAT 59.241 41.667 11.58 0.00 0.00 1.63
549 550 4.129380 CACAAAATGGATCGAGCTGGATA 58.871 43.478 11.58 0.00 0.00 2.59
550 551 2.947652 CACAAAATGGATCGAGCTGGAT 59.052 45.455 11.42 11.42 0.00 3.41
551 552 2.290260 ACACAAAATGGATCGAGCTGGA 60.290 45.455 0.00 0.00 0.00 3.86
552 553 2.086869 ACACAAAATGGATCGAGCTGG 58.913 47.619 0.00 0.00 0.00 4.85
553 554 3.005554 AGACACAAAATGGATCGAGCTG 58.994 45.455 0.00 0.00 0.00 4.24
554 555 3.340814 AGACACAAAATGGATCGAGCT 57.659 42.857 0.00 0.00 0.00 4.09
555 556 3.484229 CGAAGACACAAAATGGATCGAGC 60.484 47.826 0.00 0.00 35.19 5.03
556 557 3.926527 TCGAAGACACAAAATGGATCGAG 59.073 43.478 0.00 0.00 36.49 4.04
557 558 3.920446 TCGAAGACACAAAATGGATCGA 58.080 40.909 0.00 0.00 37.99 3.59
581 582 2.095372 CCTTCTTTGTCGCGGAATTACC 59.905 50.000 6.13 0.00 0.00 2.85
582 583 2.997986 TCCTTCTTTGTCGCGGAATTAC 59.002 45.455 6.13 0.00 0.00 1.89
583 584 3.322211 TCCTTCTTTGTCGCGGAATTA 57.678 42.857 6.13 0.00 0.00 1.40
584 585 2.178912 TCCTTCTTTGTCGCGGAATT 57.821 45.000 6.13 0.00 0.00 2.17
585 586 2.178912 TTCCTTCTTTGTCGCGGAAT 57.821 45.000 6.13 0.00 0.00 3.01
586 587 1.956297 TTTCCTTCTTTGTCGCGGAA 58.044 45.000 6.13 0.00 32.30 4.30
587 588 1.871039 CTTTTCCTTCTTTGTCGCGGA 59.129 47.619 6.13 0.00 0.00 5.54
588 589 1.069227 CCTTTTCCTTCTTTGTCGCGG 60.069 52.381 6.13 0.00 0.00 6.46
589 590 1.663161 GCCTTTTCCTTCTTTGTCGCG 60.663 52.381 0.00 0.00 0.00 5.87
590 591 1.336755 TGCCTTTTCCTTCTTTGTCGC 59.663 47.619 0.00 0.00 0.00 5.19
591 592 3.181491 TGTTGCCTTTTCCTTCTTTGTCG 60.181 43.478 0.00 0.00 0.00 4.35
592 593 4.112634 GTGTTGCCTTTTCCTTCTTTGTC 58.887 43.478 0.00 0.00 0.00 3.18
593 594 3.513515 TGTGTTGCCTTTTCCTTCTTTGT 59.486 39.130 0.00 0.00 0.00 2.83
594 595 4.122143 TGTGTTGCCTTTTCCTTCTTTG 57.878 40.909 0.00 0.00 0.00 2.77
595 596 4.383010 CCTTGTGTTGCCTTTTCCTTCTTT 60.383 41.667 0.00 0.00 0.00 2.52
596 597 3.132824 CCTTGTGTTGCCTTTTCCTTCTT 59.867 43.478 0.00 0.00 0.00 2.52
597 598 2.695147 CCTTGTGTTGCCTTTTCCTTCT 59.305 45.455 0.00 0.00 0.00 2.85
598 599 2.224042 CCCTTGTGTTGCCTTTTCCTTC 60.224 50.000 0.00 0.00 0.00 3.46
599 600 1.762370 CCCTTGTGTTGCCTTTTCCTT 59.238 47.619 0.00 0.00 0.00 3.36
600 601 1.413118 CCCTTGTGTTGCCTTTTCCT 58.587 50.000 0.00 0.00 0.00 3.36
601 602 0.249868 GCCCTTGTGTTGCCTTTTCC 60.250 55.000 0.00 0.00 0.00 3.13
602 603 0.249868 GGCCCTTGTGTTGCCTTTTC 60.250 55.000 0.00 0.00 42.01 2.29
603 604 0.980231 TGGCCCTTGTGTTGCCTTTT 60.980 50.000 0.00 0.00 45.56 2.27
604 605 1.382420 TGGCCCTTGTGTTGCCTTT 60.382 52.632 0.00 0.00 45.56 3.11
605 606 1.833934 CTGGCCCTTGTGTTGCCTT 60.834 57.895 0.00 0.00 45.56 4.35
606 607 2.203538 CTGGCCCTTGTGTTGCCT 60.204 61.111 0.00 0.00 45.56 4.75
607 608 3.305516 CCTGGCCCTTGTGTTGCC 61.306 66.667 0.00 0.00 45.56 4.52
608 609 3.305516 CCCTGGCCCTTGTGTTGC 61.306 66.667 0.00 0.00 0.00 4.17
609 610 3.305516 GCCCTGGCCCTTGTGTTG 61.306 66.667 0.00 0.00 34.56 3.33
610 611 3.164610 ATGCCCTGGCCCTTGTGTT 62.165 57.895 5.57 0.00 41.09 3.32
611 612 3.590466 GATGCCCTGGCCCTTGTGT 62.590 63.158 5.57 0.00 41.09 3.72
612 613 2.757099 GATGCCCTGGCCCTTGTG 60.757 66.667 5.57 0.00 41.09 3.33
613 614 2.943265 AGATGCCCTGGCCCTTGT 60.943 61.111 5.57 0.00 41.09 3.16
614 615 2.441532 CAGATGCCCTGGCCCTTG 60.442 66.667 5.57 0.00 39.23 3.61
626 627 4.384978 ATGGAGAAAGACCATCCACAGATG 60.385 45.833 0.00 0.00 45.53 2.90
627 628 3.184628 TGGAGAAAGACCATCCACAGAT 58.815 45.455 0.00 0.00 38.19 2.90
628 629 2.619931 TGGAGAAAGACCATCCACAGA 58.380 47.619 0.00 0.00 38.19 3.41
629 630 3.641434 ATGGAGAAAGACCATCCACAG 57.359 47.619 0.00 0.00 45.53 3.66
630 631 4.536090 AGTTATGGAGAAAGACCATCCACA 59.464 41.667 0.00 0.00 45.53 4.17
631 632 5.104259 AGTTATGGAGAAAGACCATCCAC 57.896 43.478 0.00 0.00 45.53 4.02
632 633 5.250543 TCAAGTTATGGAGAAAGACCATCCA 59.749 40.000 0.00 0.00 45.46 3.41
633 634 5.745227 TCAAGTTATGGAGAAAGACCATCC 58.255 41.667 0.00 0.00 45.46 3.51
634 635 6.410540 ACTCAAGTTATGGAGAAAGACCATC 58.589 40.000 0.00 0.00 45.46 3.51
636 637 5.825593 ACTCAAGTTATGGAGAAAGACCA 57.174 39.130 0.00 0.00 41.83 4.02
637 638 8.794335 ATTTACTCAAGTTATGGAGAAAGACC 57.206 34.615 0.00 0.00 35.17 3.85
639 640 9.601217 GCTATTTACTCAAGTTATGGAGAAAGA 57.399 33.333 0.00 0.00 35.17 2.52
640 641 9.383519 TGCTATTTACTCAAGTTATGGAGAAAG 57.616 33.333 0.00 0.00 35.17 2.62
641 642 9.905713 ATGCTATTTACTCAAGTTATGGAGAAA 57.094 29.630 0.00 0.00 35.17 2.52
1114 1195 2.892215 CCTAGGCCTACTAGCACCTAAC 59.108 54.545 8.91 0.00 46.44 2.34
1115 1196 2.755549 GCCTAGGCCTACTAGCACCTAA 60.756 54.545 24.19 0.00 46.44 2.69
1116 1197 1.203025 GCCTAGGCCTACTAGCACCTA 60.203 57.143 24.19 0.00 46.44 3.08
1117 1198 0.470268 GCCTAGGCCTACTAGCACCT 60.470 60.000 24.19 0.00 46.44 4.00
1118 1199 0.470268 AGCCTAGGCCTACTAGCACC 60.470 60.000 30.42 0.00 46.44 5.01
1119 1200 1.887854 GTAGCCTAGGCCTACTAGCAC 59.112 57.143 30.42 11.14 46.44 4.40
1239 1338 5.721960 ACCCTAACACTGTACAGAGATGAAT 59.278 40.000 29.30 13.19 0.00 2.57
1291 1392 5.536161 ACTTGCACTGTTCATTAAACCTGAT 59.464 36.000 0.00 0.00 37.03 2.90
1790 2004 3.517901 CCCATCAACCCACTCTACAACTA 59.482 47.826 0.00 0.00 0.00 2.24
1791 2005 2.305927 CCCATCAACCCACTCTACAACT 59.694 50.000 0.00 0.00 0.00 3.16
1839 2053 3.194116 ACATTTCCCATAGCTTGCACAAG 59.806 43.478 6.01 6.01 41.24 3.16
2079 2299 8.017418 TCTTCTTCTTCTTCTCAAGTTCTTCT 57.983 34.615 0.00 0.00 0.00 2.85
2094 2314 4.953579 TCCTCTAGCTCCTTCTTCTTCTTC 59.046 45.833 0.00 0.00 0.00 2.87
2095 2315 4.941713 TCCTCTAGCTCCTTCTTCTTCTT 58.058 43.478 0.00 0.00 0.00 2.52
2096 2316 4.229582 TCTCCTCTAGCTCCTTCTTCTTCT 59.770 45.833 0.00 0.00 0.00 2.85
2305 2552 2.431057 ACTTCTCCTTGCTACCATACCG 59.569 50.000 0.00 0.00 0.00 4.02
2313 2560 5.483685 TTTGCTCTAACTTCTCCTTGCTA 57.516 39.130 0.00 0.00 0.00 3.49
2338 2586 1.487976 TCATGACTCAAGGATGGCCTC 59.512 52.381 3.32 0.00 46.28 4.70
2716 3023 3.426615 CACTAAGCCCAATTACCCACAA 58.573 45.455 0.00 0.00 0.00 3.33
2795 3109 4.058731 TGGGGAGGGGTTTATATTGACAT 58.941 43.478 0.00 0.00 0.00 3.06
2980 3318 2.593978 CTCATCCTGGGCCACCTG 59.406 66.667 0.00 0.00 37.76 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.