Multiple sequence alignment - TraesCS6D01G348600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G348600 chr6D 100.000 2288 0 0 1 2288 446604637 446602350 0.000000e+00 4226
1 TraesCS6D01G348600 chr6D 98.867 353 3 1 1936 2288 446594361 446594010 1.490000e-176 628
2 TraesCS6D01G348600 chr1D 96.080 1709 62 4 1 1709 369900551 369902254 0.000000e+00 2780
3 TraesCS6D01G348600 chr2D 94.001 1717 99 4 1 1715 646800102 646798388 0.000000e+00 2597
4 TraesCS6D01G348600 chr2D 94.001 1717 97 4 1 1715 646883876 646882164 0.000000e+00 2595
5 TraesCS6D01G348600 chr2D 93.710 1717 105 3 1 1715 646961477 646959762 0.000000e+00 2569
6 TraesCS6D01G348600 chr2D 93.593 1717 90 5 1 1715 647091182 647089484 0.000000e+00 2543
7 TraesCS6D01G348600 chr2D 92.662 1717 101 9 1 1715 646863594 646861901 0.000000e+00 2449
8 TraesCS6D01G348600 chr2D 98.319 357 3 2 1932 2288 523394238 523394591 6.940000e-175 623
9 TraesCS6D01G348600 chr2D 98.310 355 4 1 1934 2288 523402642 523402994 2.500000e-174 621
10 TraesCS6D01G348600 chr7A 93.684 1710 103 3 1 1709 167800039 167798334 0.000000e+00 2555
11 TraesCS6D01G348600 chr7A 90.323 124 12 0 1592 1715 699362060 699361937 1.820000e-36 163
12 TraesCS6D01G348600 chr2A 92.662 1717 113 10 1 1712 171849916 171851624 0.000000e+00 2460
13 TraesCS6D01G348600 chr1A 92.753 1711 102 8 1 1709 463969303 463970993 0.000000e+00 2453
14 TraesCS6D01G348600 chr4D 99.153 354 1 1 1935 2288 392800844 392801195 8.920000e-179 636
15 TraesCS6D01G348600 chr7D 98.873 355 2 1 1934 2288 425678394 425678746 1.150000e-177 632
16 TraesCS6D01G348600 chr7D 98.870 354 2 1 1935 2288 162055483 162055132 4.150000e-177 630
17 TraesCS6D01G348600 chr7D 98.592 355 3 1 1934 2288 162047613 162047261 5.370000e-176 627
18 TraesCS6D01G348600 chr7D 98.592 355 4 1 1934 2288 178501414 178501767 5.370000e-176 627
19 TraesCS6D01G348600 chr5D 98.305 354 4 1 1935 2288 220983194 220982843 8.980000e-174 619


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G348600 chr6D 446602350 446604637 2287 True 4226 4226 100.000 1 2288 1 chr6D.!!$R2 2287
1 TraesCS6D01G348600 chr1D 369900551 369902254 1703 False 2780 2780 96.080 1 1709 1 chr1D.!!$F1 1708
2 TraesCS6D01G348600 chr2D 646798388 646800102 1714 True 2597 2597 94.001 1 1715 1 chr2D.!!$R1 1714
3 TraesCS6D01G348600 chr2D 646882164 646883876 1712 True 2595 2595 94.001 1 1715 1 chr2D.!!$R3 1714
4 TraesCS6D01G348600 chr2D 646959762 646961477 1715 True 2569 2569 93.710 1 1715 1 chr2D.!!$R4 1714
5 TraesCS6D01G348600 chr2D 647089484 647091182 1698 True 2543 2543 93.593 1 1715 1 chr2D.!!$R5 1714
6 TraesCS6D01G348600 chr2D 646861901 646863594 1693 True 2449 2449 92.662 1 1715 1 chr2D.!!$R2 1714
7 TraesCS6D01G348600 chr7A 167798334 167800039 1705 True 2555 2555 93.684 1 1709 1 chr7A.!!$R1 1708
8 TraesCS6D01G348600 chr2A 171849916 171851624 1708 False 2460 2460 92.662 1 1712 1 chr2A.!!$F1 1711
9 TraesCS6D01G348600 chr1A 463969303 463970993 1690 False 2453 2453 92.753 1 1709 1 chr1A.!!$F1 1708

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 747 0.109153 TGCTGTGCTTGACTCCATGT 59.891 50.0 0.0 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1875 1918 0.033504 ACTCGTGGTCATCGCAAAGT 59.966 50.0 0.0 0.0 0.0 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
281 286 2.147150 GCACCACTTCTTCCTCTGTTC 58.853 52.381 0.00 0.00 0.00 3.18
728 736 1.520494 CATGAACTCTGTGCTGTGCT 58.480 50.000 0.00 0.00 0.00 4.40
739 747 0.109153 TGCTGTGCTTGACTCCATGT 59.891 50.000 0.00 0.00 0.00 3.21
813 821 4.351054 AAGCAGCCCCTTCACCCG 62.351 66.667 0.00 0.00 0.00 5.28
864 872 1.248785 CCGAGGAAGACCCGAAGACA 61.249 60.000 0.00 0.00 40.87 3.41
1070 1080 0.320374 CTCAGGAACAACACCGGCTA 59.680 55.000 0.00 0.00 0.00 3.93
1155 1165 3.272766 CGCAGCCGTTCATCAGATA 57.727 52.632 0.00 0.00 0.00 1.98
1220 1230 3.285484 CCCTCAAGGTCATCATCTTTGG 58.715 50.000 0.00 0.00 0.00 3.28
1543 1554 2.030274 GGGTTTGTGGACTAACATGCAC 60.030 50.000 0.00 0.00 41.03 4.57
1583 1610 2.036256 GGTTCAGCCCATGCAGGT 59.964 61.111 0.00 0.00 41.13 4.00
1589 1616 0.543277 CAGCCCATGCAGGTAAGAGA 59.457 55.000 0.00 0.00 41.13 3.10
1590 1617 0.835941 AGCCCATGCAGGTAAGAGAG 59.164 55.000 0.00 0.00 41.13 3.20
1621 1664 4.818642 CAACCAAACAACATGCATATGGA 58.181 39.130 14.21 1.06 38.66 3.41
1677 1720 2.009774 GGAGAAGTGTATGCAATGCGT 58.990 47.619 4.95 4.95 0.00 5.24
1709 1752 3.532155 GGCAACCAAACACGCCCA 61.532 61.111 0.00 0.00 38.67 5.36
1711 1754 1.068921 GCAACCAAACACGCCCAAT 59.931 52.632 0.00 0.00 0.00 3.16
1715 1758 1.181786 ACCAAACACGCCCAATATGG 58.818 50.000 0.00 0.00 37.25 2.74
1716 1759 1.181786 CCAAACACGCCCAATATGGT 58.818 50.000 0.00 0.00 35.17 3.55
1717 1760 1.548269 CCAAACACGCCCAATATGGTT 59.452 47.619 0.00 0.00 35.17 3.67
1718 1761 2.605030 CAAACACGCCCAATATGGTTG 58.395 47.619 0.00 0.00 35.17 3.77
1719 1762 0.530288 AACACGCCCAATATGGTTGC 59.470 50.000 0.00 0.00 35.17 4.17
1720 1763 0.610509 ACACGCCCAATATGGTTGCA 60.611 50.000 0.00 0.00 35.17 4.08
1721 1764 0.101040 CACGCCCAATATGGTTGCAG 59.899 55.000 0.00 0.00 35.17 4.41
1722 1765 1.037030 ACGCCCAATATGGTTGCAGG 61.037 55.000 0.00 0.00 35.17 4.85
1723 1766 1.442987 GCCCAATATGGTTGCAGGC 59.557 57.895 0.00 0.00 35.17 4.85
1724 1767 2.031674 GCCCAATATGGTTGCAGGCC 62.032 60.000 0.00 0.00 35.17 5.19
1725 1768 0.397535 CCCAATATGGTTGCAGGCCT 60.398 55.000 0.00 0.00 35.17 5.19
1726 1769 1.133513 CCCAATATGGTTGCAGGCCTA 60.134 52.381 3.98 0.00 35.17 3.93
1727 1770 2.491455 CCCAATATGGTTGCAGGCCTAT 60.491 50.000 3.98 0.00 35.17 2.57
1728 1771 3.233507 CCAATATGGTTGCAGGCCTATT 58.766 45.455 3.98 0.00 31.35 1.73
1729 1772 3.256631 CCAATATGGTTGCAGGCCTATTC 59.743 47.826 3.98 0.00 31.35 1.75
1730 1773 4.147321 CAATATGGTTGCAGGCCTATTCT 58.853 43.478 3.98 0.00 0.00 2.40
1731 1774 5.316167 CAATATGGTTGCAGGCCTATTCTA 58.684 41.667 3.98 0.00 0.00 2.10
1732 1775 3.951563 ATGGTTGCAGGCCTATTCTAA 57.048 42.857 3.98 0.00 0.00 2.10
1733 1776 3.281727 TGGTTGCAGGCCTATTCTAAG 57.718 47.619 3.98 0.00 0.00 2.18
1734 1777 1.950216 GGTTGCAGGCCTATTCTAAGC 59.050 52.381 3.98 2.83 0.00 3.09
1735 1778 2.643551 GTTGCAGGCCTATTCTAAGCA 58.356 47.619 3.98 6.19 0.00 3.91
1736 1779 2.615912 GTTGCAGGCCTATTCTAAGCAG 59.384 50.000 3.98 0.00 0.00 4.24
1737 1780 2.118679 TGCAGGCCTATTCTAAGCAGA 58.881 47.619 3.98 0.00 0.00 4.26
1738 1781 2.707791 TGCAGGCCTATTCTAAGCAGAT 59.292 45.455 3.98 0.00 0.00 2.90
1739 1782 3.072944 GCAGGCCTATTCTAAGCAGATG 58.927 50.000 3.98 0.00 0.00 2.90
1740 1783 3.072944 CAGGCCTATTCTAAGCAGATGC 58.927 50.000 3.98 0.00 42.49 3.91
1741 1784 2.707791 AGGCCTATTCTAAGCAGATGCA 59.292 45.455 1.29 0.00 45.16 3.96
1742 1785 3.072944 GGCCTATTCTAAGCAGATGCAG 58.927 50.000 7.68 0.00 45.16 4.41
1743 1786 3.244353 GGCCTATTCTAAGCAGATGCAGA 60.244 47.826 7.68 0.00 45.16 4.26
1744 1787 4.384056 GCCTATTCTAAGCAGATGCAGAA 58.616 43.478 7.68 8.61 45.16 3.02
1745 1788 5.002516 GCCTATTCTAAGCAGATGCAGAAT 58.997 41.667 18.67 18.67 42.59 2.40
1746 1789 5.106634 GCCTATTCTAAGCAGATGCAGAATG 60.107 44.000 21.57 14.58 41.16 2.67
1747 1790 5.996513 CCTATTCTAAGCAGATGCAGAATGT 59.003 40.000 21.57 7.84 41.16 2.71
1748 1791 6.485984 CCTATTCTAAGCAGATGCAGAATGTT 59.514 38.462 21.57 5.62 41.16 2.71
1749 1792 5.556355 TTCTAAGCAGATGCAGAATGTTG 57.444 39.130 7.68 0.00 45.16 3.33
1750 1793 3.943381 TCTAAGCAGATGCAGAATGTTGG 59.057 43.478 7.68 0.00 45.16 3.77
1751 1794 2.211250 AGCAGATGCAGAATGTTGGT 57.789 45.000 7.68 0.00 45.16 3.67
1752 1795 1.816835 AGCAGATGCAGAATGTTGGTG 59.183 47.619 7.68 0.00 45.16 4.17
1753 1796 1.542915 GCAGATGCAGAATGTTGGTGT 59.457 47.619 0.00 0.00 41.59 4.16
1754 1797 2.029649 GCAGATGCAGAATGTTGGTGTT 60.030 45.455 0.00 0.00 41.59 3.32
1755 1798 3.553508 GCAGATGCAGAATGTTGGTGTTT 60.554 43.478 0.00 0.00 41.59 2.83
1756 1799 4.321156 GCAGATGCAGAATGTTGGTGTTTA 60.321 41.667 0.00 0.00 41.59 2.01
1757 1800 5.771469 CAGATGCAGAATGTTGGTGTTTAA 58.229 37.500 0.00 0.00 39.31 1.52
1758 1801 6.392354 CAGATGCAGAATGTTGGTGTTTAAT 58.608 36.000 0.00 0.00 39.31 1.40
1759 1802 6.869913 CAGATGCAGAATGTTGGTGTTTAATT 59.130 34.615 0.00 0.00 39.31 1.40
1760 1803 8.028354 CAGATGCAGAATGTTGGTGTTTAATTA 58.972 33.333 0.00 0.00 39.31 1.40
1761 1804 8.028938 AGATGCAGAATGTTGGTGTTTAATTAC 58.971 33.333 0.00 0.00 39.31 1.89
1762 1805 7.043961 TGCAGAATGTTGGTGTTTAATTACA 57.956 32.000 0.00 0.00 39.31 2.41
1763 1806 7.665690 TGCAGAATGTTGGTGTTTAATTACAT 58.334 30.769 0.00 0.00 39.31 2.29
1764 1807 7.598118 TGCAGAATGTTGGTGTTTAATTACATG 59.402 33.333 0.00 0.00 39.31 3.21
1765 1808 7.411804 GCAGAATGTTGGTGTTTAATTACATGC 60.412 37.037 0.00 0.00 39.31 4.06
1766 1809 7.598118 CAGAATGTTGGTGTTTAATTACATGCA 59.402 33.333 0.00 0.00 0.00 3.96
1767 1810 8.147058 AGAATGTTGGTGTTTAATTACATGCAA 58.853 29.630 0.00 0.00 0.00 4.08
1768 1811 7.650834 ATGTTGGTGTTTAATTACATGCAAC 57.349 32.000 0.00 0.00 0.00 4.17
1769 1812 6.573434 TGTTGGTGTTTAATTACATGCAACA 58.427 32.000 0.00 0.00 0.00 3.33
1770 1813 6.699204 TGTTGGTGTTTAATTACATGCAACAG 59.301 34.615 0.00 0.00 0.00 3.16
1771 1814 5.226396 TGGTGTTTAATTACATGCAACAGC 58.774 37.500 16.68 16.68 43.14 4.40
1772 1815 4.323336 GGTGTTTAATTACATGCAACAGCG 59.677 41.667 11.36 0.00 36.46 5.18
1773 1816 4.323336 GTGTTTAATTACATGCAACAGCGG 59.677 41.667 0.00 0.00 0.00 5.52
1774 1817 4.022762 TGTTTAATTACATGCAACAGCGGT 60.023 37.500 0.00 0.00 0.00 5.68
1775 1818 2.634982 AATTACATGCAACAGCGGTG 57.365 45.000 14.13 14.13 0.00 4.94
1776 1819 1.819928 ATTACATGCAACAGCGGTGA 58.180 45.000 23.44 0.00 0.00 4.02
1777 1820 1.598882 TTACATGCAACAGCGGTGAA 58.401 45.000 23.44 4.05 0.00 3.18
1778 1821 1.598882 TACATGCAACAGCGGTGAAA 58.401 45.000 23.44 3.67 0.00 2.69
1779 1822 0.961019 ACATGCAACAGCGGTGAAAT 59.039 45.000 23.44 3.95 0.00 2.17
1780 1823 2.158559 ACATGCAACAGCGGTGAAATA 58.841 42.857 23.44 5.25 0.00 1.40
1781 1824 2.095263 ACATGCAACAGCGGTGAAATAC 60.095 45.455 23.44 6.29 0.00 1.89
1782 1825 1.598882 TGCAACAGCGGTGAAATACA 58.401 45.000 23.44 8.87 0.00 2.29
1783 1826 1.950216 TGCAACAGCGGTGAAATACAA 59.050 42.857 23.44 0.00 0.00 2.41
1784 1827 2.031245 TGCAACAGCGGTGAAATACAAG 60.031 45.455 23.44 2.69 0.00 3.16
1785 1828 2.668279 GCAACAGCGGTGAAATACAAGG 60.668 50.000 23.44 0.78 0.00 3.61
1786 1829 1.821216 ACAGCGGTGAAATACAAGGG 58.179 50.000 23.44 0.00 0.00 3.95
1787 1830 1.094785 CAGCGGTGAAATACAAGGGG 58.905 55.000 9.50 0.00 0.00 4.79
1788 1831 0.679960 AGCGGTGAAATACAAGGGGC 60.680 55.000 0.00 0.00 0.00 5.80
1789 1832 0.679960 GCGGTGAAATACAAGGGGCT 60.680 55.000 0.00 0.00 0.00 5.19
1790 1833 1.407712 GCGGTGAAATACAAGGGGCTA 60.408 52.381 0.00 0.00 0.00 3.93
1791 1834 2.748465 GCGGTGAAATACAAGGGGCTAT 60.748 50.000 0.00 0.00 0.00 2.97
1792 1835 3.551846 CGGTGAAATACAAGGGGCTATT 58.448 45.455 0.00 0.00 0.00 1.73
1793 1836 3.951680 CGGTGAAATACAAGGGGCTATTT 59.048 43.478 0.00 0.00 0.00 1.40
1794 1837 4.401202 CGGTGAAATACAAGGGGCTATTTT 59.599 41.667 0.00 0.00 0.00 1.82
1795 1838 5.660460 GGTGAAATACAAGGGGCTATTTTG 58.340 41.667 0.00 0.00 0.00 2.44
1796 1839 5.420739 GGTGAAATACAAGGGGCTATTTTGA 59.579 40.000 0.00 0.00 0.00 2.69
1797 1840 6.330278 GTGAAATACAAGGGGCTATTTTGAC 58.670 40.000 0.00 0.00 0.00 3.18
1798 1841 6.013379 TGAAATACAAGGGGCTATTTTGACA 58.987 36.000 0.00 0.00 0.00 3.58
1799 1842 6.495181 TGAAATACAAGGGGCTATTTTGACAA 59.505 34.615 0.00 0.00 0.00 3.18
1800 1843 6.530019 AATACAAGGGGCTATTTTGACAAG 57.470 37.500 0.00 0.00 0.00 3.16
1801 1844 3.165071 ACAAGGGGCTATTTTGACAAGG 58.835 45.455 0.00 0.00 0.00 3.61
1802 1845 3.181423 ACAAGGGGCTATTTTGACAAGGA 60.181 43.478 0.00 0.00 0.00 3.36
1803 1846 3.372440 AGGGGCTATTTTGACAAGGAG 57.628 47.619 0.00 0.00 0.00 3.69
1804 1847 1.751351 GGGGCTATTTTGACAAGGAGC 59.249 52.381 8.71 8.71 0.00 4.70
1805 1848 2.446435 GGGCTATTTTGACAAGGAGCA 58.554 47.619 15.67 0.00 0.00 4.26
1806 1849 3.026694 GGGCTATTTTGACAAGGAGCAT 58.973 45.455 15.67 0.00 0.00 3.79
1807 1850 3.181483 GGGCTATTTTGACAAGGAGCATG 60.181 47.826 15.67 0.00 0.00 4.06
1808 1851 3.442100 GCTATTTTGACAAGGAGCATGC 58.558 45.455 10.51 10.51 0.00 4.06
1809 1852 3.129988 GCTATTTTGACAAGGAGCATGCT 59.870 43.478 22.92 22.92 40.15 3.79
1810 1853 4.336433 GCTATTTTGACAAGGAGCATGCTA 59.664 41.667 22.74 0.00 33.13 3.49
1811 1854 5.009410 GCTATTTTGACAAGGAGCATGCTAT 59.991 40.000 22.74 9.91 33.13 2.97
1812 1855 4.970662 TTTTGACAAGGAGCATGCTATC 57.029 40.909 22.74 16.01 33.13 2.08
1813 1856 3.920231 TTGACAAGGAGCATGCTATCT 57.080 42.857 22.74 18.11 33.13 1.98
1814 1857 5.357742 TTTGACAAGGAGCATGCTATCTA 57.642 39.130 22.74 7.69 33.13 1.98
1815 1858 4.597404 TGACAAGGAGCATGCTATCTAG 57.403 45.455 22.74 12.29 33.13 2.43
1827 1870 3.518634 GCTATCTAGCTAGGGCATGAC 57.481 52.381 20.58 0.00 45.62 3.06
1828 1871 3.096092 GCTATCTAGCTAGGGCATGACT 58.904 50.000 20.58 0.00 45.62 3.41
1829 1872 3.513515 GCTATCTAGCTAGGGCATGACTT 59.486 47.826 20.58 0.00 45.62 3.01
1830 1873 4.020662 GCTATCTAGCTAGGGCATGACTTT 60.021 45.833 20.58 0.00 45.62 2.66
1831 1874 5.186021 GCTATCTAGCTAGGGCATGACTTTA 59.814 44.000 20.58 0.00 45.62 1.85
1832 1875 5.736951 ATCTAGCTAGGGCATGACTTTAG 57.263 43.478 20.58 2.27 41.70 1.85
1833 1876 4.547671 TCTAGCTAGGGCATGACTTTAGT 58.452 43.478 20.58 0.00 41.70 2.24
1834 1877 3.550437 AGCTAGGGCATGACTTTAGTG 57.450 47.619 0.00 0.00 41.70 2.74
1835 1878 2.840651 AGCTAGGGCATGACTTTAGTGT 59.159 45.455 0.00 0.00 41.70 3.55
1836 1879 2.939103 GCTAGGGCATGACTTTAGTGTG 59.061 50.000 0.00 0.00 38.54 3.82
1837 1880 2.496899 AGGGCATGACTTTAGTGTGG 57.503 50.000 0.00 0.00 0.00 4.17
1838 1881 1.004745 AGGGCATGACTTTAGTGTGGG 59.995 52.381 0.00 0.00 0.00 4.61
1839 1882 1.463674 GGCATGACTTTAGTGTGGGG 58.536 55.000 0.00 0.00 0.00 4.96
1840 1883 0.811281 GCATGACTTTAGTGTGGGGC 59.189 55.000 0.00 0.00 0.00 5.80
1841 1884 1.614317 GCATGACTTTAGTGTGGGGCT 60.614 52.381 0.00 0.00 0.00 5.19
1842 1885 2.355716 GCATGACTTTAGTGTGGGGCTA 60.356 50.000 0.00 0.00 0.00 3.93
1843 1886 3.685550 GCATGACTTTAGTGTGGGGCTAT 60.686 47.826 0.00 0.00 0.00 2.97
1844 1887 3.906720 TGACTTTAGTGTGGGGCTATC 57.093 47.619 0.00 0.00 0.00 2.08
1845 1888 2.504175 TGACTTTAGTGTGGGGCTATCC 59.496 50.000 0.00 0.00 0.00 2.59
1846 1889 2.504175 GACTTTAGTGTGGGGCTATCCA 59.496 50.000 0.00 0.00 37.22 3.41
1847 1890 2.916934 ACTTTAGTGTGGGGCTATCCAA 59.083 45.455 0.00 0.00 38.72 3.53
1848 1891 3.054361 ACTTTAGTGTGGGGCTATCCAAG 60.054 47.826 0.00 0.00 38.72 3.61
1849 1892 2.561209 TAGTGTGGGGCTATCCAAGA 57.439 50.000 0.00 0.00 38.72 3.02
1850 1893 1.207791 AGTGTGGGGCTATCCAAGAG 58.792 55.000 0.00 0.00 38.72 2.85
1851 1894 0.912486 GTGTGGGGCTATCCAAGAGT 59.088 55.000 0.00 0.00 38.72 3.24
1852 1895 0.911769 TGTGGGGCTATCCAAGAGTG 59.088 55.000 0.00 0.00 38.72 3.51
1853 1896 1.204146 GTGGGGCTATCCAAGAGTGA 58.796 55.000 0.00 0.00 38.72 3.41
1854 1897 1.559682 GTGGGGCTATCCAAGAGTGAA 59.440 52.381 0.00 0.00 38.72 3.18
1855 1898 2.026262 GTGGGGCTATCCAAGAGTGAAA 60.026 50.000 0.00 0.00 38.72 2.69
1856 1899 2.647299 TGGGGCTATCCAAGAGTGAAAA 59.353 45.455 0.00 0.00 37.22 2.29
1857 1900 3.269381 TGGGGCTATCCAAGAGTGAAAAT 59.731 43.478 0.00 0.00 37.22 1.82
1858 1901 4.264352 TGGGGCTATCCAAGAGTGAAAATT 60.264 41.667 0.00 0.00 37.22 1.82
1859 1902 4.711846 GGGGCTATCCAAGAGTGAAAATTT 59.288 41.667 0.00 0.00 37.22 1.82
1860 1903 5.187772 GGGGCTATCCAAGAGTGAAAATTTT 59.812 40.000 2.28 2.28 37.22 1.82
1861 1904 6.379988 GGGGCTATCCAAGAGTGAAAATTTTA 59.620 38.462 2.75 0.00 37.22 1.52
1862 1905 7.258441 GGGCTATCCAAGAGTGAAAATTTTAC 58.742 38.462 2.75 3.33 35.00 2.01
1863 1906 7.258441 GGCTATCCAAGAGTGAAAATTTTACC 58.742 38.462 2.75 0.00 0.00 2.85
1864 1907 7.093945 GGCTATCCAAGAGTGAAAATTTTACCA 60.094 37.037 2.75 0.00 0.00 3.25
1865 1908 8.470002 GCTATCCAAGAGTGAAAATTTTACCAT 58.530 33.333 2.75 0.00 0.00 3.55
1866 1909 9.793252 CTATCCAAGAGTGAAAATTTTACCATG 57.207 33.333 2.75 0.00 0.00 3.66
1867 1910 6.454795 TCCAAGAGTGAAAATTTTACCATGC 58.545 36.000 2.75 0.00 0.00 4.06
1868 1911 6.041409 TCCAAGAGTGAAAATTTTACCATGCA 59.959 34.615 2.75 0.00 0.00 3.96
1869 1912 6.875195 CCAAGAGTGAAAATTTTACCATGCAT 59.125 34.615 2.75 0.00 0.00 3.96
1870 1913 7.388500 CCAAGAGTGAAAATTTTACCATGCATT 59.612 33.333 2.75 0.00 0.00 3.56
1871 1914 8.776470 CAAGAGTGAAAATTTTACCATGCATTT 58.224 29.630 2.75 0.00 0.00 2.32
1872 1915 8.314143 AGAGTGAAAATTTTACCATGCATTTG 57.686 30.769 2.75 0.00 0.00 2.32
1873 1916 7.388500 AGAGTGAAAATTTTACCATGCATTTGG 59.612 33.333 2.75 4.73 42.82 3.28
1882 1925 2.261345 CCATGCATTTGGTACTTTGCG 58.739 47.619 0.00 0.00 37.92 4.85
1883 1926 2.094803 CCATGCATTTGGTACTTTGCGA 60.095 45.455 0.00 0.00 37.92 5.10
1884 1927 3.429272 CCATGCATTTGGTACTTTGCGAT 60.429 43.478 0.00 0.00 37.92 4.58
1885 1928 3.214697 TGCATTTGGTACTTTGCGATG 57.785 42.857 0.00 0.00 37.92 3.84
1886 1929 2.816672 TGCATTTGGTACTTTGCGATGA 59.183 40.909 0.00 0.00 37.92 2.92
1887 1930 3.171277 GCATTTGGTACTTTGCGATGAC 58.829 45.455 0.00 0.00 0.00 3.06
1888 1931 3.758300 CATTTGGTACTTTGCGATGACC 58.242 45.455 0.00 0.00 0.00 4.02
1889 1932 2.552599 TTGGTACTTTGCGATGACCA 57.447 45.000 0.00 6.91 38.41 4.02
1890 1933 1.803334 TGGTACTTTGCGATGACCAC 58.197 50.000 0.00 0.00 35.26 4.16
1891 1934 0.719465 GGTACTTTGCGATGACCACG 59.281 55.000 0.00 0.00 0.00 4.94
1892 1935 1.670674 GGTACTTTGCGATGACCACGA 60.671 52.381 0.00 0.00 0.00 4.35
1893 1936 1.654105 GTACTTTGCGATGACCACGAG 59.346 52.381 0.00 0.00 0.00 4.18
1894 1937 0.033504 ACTTTGCGATGACCACGAGT 59.966 50.000 0.00 0.00 0.00 4.18
1895 1938 1.271379 ACTTTGCGATGACCACGAGTA 59.729 47.619 0.00 0.00 0.00 2.59
1896 1939 1.654105 CTTTGCGATGACCACGAGTAC 59.346 52.381 0.00 0.00 0.00 2.73
1897 1940 0.885879 TTGCGATGACCACGAGTACT 59.114 50.000 0.00 0.00 0.00 2.73
1898 1941 0.450583 TGCGATGACCACGAGTACTC 59.549 55.000 13.18 13.18 0.00 2.59
1917 1960 9.649024 GAGTACTCGATTAGTAATACAGACAAC 57.351 37.037 7.22 0.00 42.37 3.32
1918 1961 9.170734 AGTACTCGATTAGTAATACAGACAACA 57.829 33.333 0.00 0.00 42.37 3.33
1919 1962 9.219497 GTACTCGATTAGTAATACAGACAACAC 57.781 37.037 0.00 0.00 42.37 3.32
1920 1963 7.823665 ACTCGATTAGTAATACAGACAACACA 58.176 34.615 0.00 0.00 36.36 3.72
1921 1964 8.467598 ACTCGATTAGTAATACAGACAACACAT 58.532 33.333 0.00 0.00 36.36 3.21
1922 1965 8.628882 TCGATTAGTAATACAGACAACACATG 57.371 34.615 0.00 0.00 0.00 3.21
1923 1966 8.463607 TCGATTAGTAATACAGACAACACATGA 58.536 33.333 0.00 0.00 0.00 3.07
1924 1967 8.746751 CGATTAGTAATACAGACAACACATGAG 58.253 37.037 0.00 0.00 0.00 2.90
1925 1968 9.587772 GATTAGTAATACAGACAACACATGAGT 57.412 33.333 0.00 0.00 0.00 3.41
1926 1969 9.944376 ATTAGTAATACAGACAACACATGAGTT 57.056 29.630 0.00 0.00 0.00 3.01
1929 1972 9.944376 AGTAATACAGACAACACATGAGTTAAT 57.056 29.630 8.25 0.21 0.00 1.40
1935 1978 9.897744 ACAGACAACACATGAGTTAATATTTTG 57.102 29.630 8.25 0.00 0.00 2.44
1936 1979 9.897744 CAGACAACACATGAGTTAATATTTTGT 57.102 29.630 8.25 0.73 0.00 2.83
1937 1980 9.897744 AGACAACACATGAGTTAATATTTTGTG 57.102 29.630 8.25 0.00 39.03 3.33
1938 1981 9.891828 GACAACACATGAGTTAATATTTTGTGA 57.108 29.630 8.25 0.00 37.14 3.58
1939 1982 9.677567 ACAACACATGAGTTAATATTTTGTGAC 57.322 29.630 8.25 0.00 37.14 3.67
1940 1983 8.839914 CAACACATGAGTTAATATTTTGTGACG 58.160 33.333 8.25 0.00 37.14 4.35
1941 1984 7.021196 ACACATGAGTTAATATTTTGTGACGC 58.979 34.615 0.00 0.00 37.14 5.19
1942 1985 6.468956 CACATGAGTTAATATTTTGTGACGCC 59.531 38.462 0.00 0.00 36.06 5.68
1943 1986 5.554822 TGAGTTAATATTTTGTGACGCCC 57.445 39.130 0.00 0.00 0.00 6.13
1944 1987 4.093703 TGAGTTAATATTTTGTGACGCCCG 59.906 41.667 0.00 0.00 0.00 6.13
1945 1988 3.375922 AGTTAATATTTTGTGACGCCCGG 59.624 43.478 0.00 0.00 0.00 5.73
1946 1989 2.116827 AATATTTTGTGACGCCCGGA 57.883 45.000 0.73 0.00 0.00 5.14
1947 1990 2.341846 ATATTTTGTGACGCCCGGAT 57.658 45.000 0.73 0.00 0.00 4.18
1948 1991 2.983907 TATTTTGTGACGCCCGGATA 57.016 45.000 0.73 0.00 0.00 2.59
1949 1992 2.116827 ATTTTGTGACGCCCGGATAA 57.883 45.000 0.73 0.00 0.00 1.75
1950 1993 2.116827 TTTTGTGACGCCCGGATAAT 57.883 45.000 0.73 0.00 0.00 1.28
1951 1994 2.116827 TTTGTGACGCCCGGATAATT 57.883 45.000 0.73 0.00 0.00 1.40
1952 1995 2.983907 TTGTGACGCCCGGATAATTA 57.016 45.000 0.73 0.00 0.00 1.40
1953 1996 3.478857 TTGTGACGCCCGGATAATTAT 57.521 42.857 0.73 0.00 0.00 1.28
1954 1997 2.761559 TGTGACGCCCGGATAATTATG 58.238 47.619 0.73 0.00 0.00 1.90
1955 1998 1.463444 GTGACGCCCGGATAATTATGC 59.537 52.381 0.73 4.64 0.00 3.14
1956 1999 1.346395 TGACGCCCGGATAATTATGCT 59.654 47.619 14.18 0.00 0.00 3.79
1957 2000 2.563620 TGACGCCCGGATAATTATGCTA 59.436 45.455 14.18 0.00 0.00 3.49
1958 2001 2.928116 GACGCCCGGATAATTATGCTAC 59.072 50.000 14.18 3.72 0.00 3.58
1959 2002 2.300723 ACGCCCGGATAATTATGCTACA 59.699 45.455 14.18 0.00 0.00 2.74
1960 2003 2.930040 CGCCCGGATAATTATGCTACAG 59.070 50.000 14.18 0.00 0.00 2.74
1961 2004 3.616560 CGCCCGGATAATTATGCTACAGT 60.617 47.826 14.18 0.00 0.00 3.55
1962 2005 4.381185 CGCCCGGATAATTATGCTACAGTA 60.381 45.833 14.18 0.00 0.00 2.74
1963 2006 5.484715 GCCCGGATAATTATGCTACAGTAA 58.515 41.667 14.18 0.00 0.00 2.24
1964 2007 5.935789 GCCCGGATAATTATGCTACAGTAAA 59.064 40.000 14.18 0.00 0.00 2.01
1965 2008 6.128363 GCCCGGATAATTATGCTACAGTAAAC 60.128 42.308 14.18 0.00 0.00 2.01
1966 2009 6.370718 CCCGGATAATTATGCTACAGTAAACC 59.629 42.308 14.18 0.00 0.00 3.27
1967 2010 7.159372 CCGGATAATTATGCTACAGTAAACCT 58.841 38.462 14.18 0.00 0.00 3.50
1968 2011 8.308931 CCGGATAATTATGCTACAGTAAACCTA 58.691 37.037 14.18 0.00 0.00 3.08
1969 2012 9.136952 CGGATAATTATGCTACAGTAAACCTAC 57.863 37.037 14.18 0.00 0.00 3.18
1970 2013 9.136952 GGATAATTATGCTACAGTAAACCTACG 57.863 37.037 9.54 0.00 32.87 3.51
1971 2014 6.839820 AATTATGCTACAGTAAACCTACGC 57.160 37.500 0.00 0.00 32.87 4.42
1972 2015 5.587388 TTATGCTACAGTAAACCTACGCT 57.413 39.130 0.00 0.00 32.87 5.07
1973 2016 6.698008 TTATGCTACAGTAAACCTACGCTA 57.302 37.500 0.00 0.00 32.87 4.26
1974 2017 5.587388 ATGCTACAGTAAACCTACGCTAA 57.413 39.130 0.00 0.00 32.87 3.09
1975 2018 5.587388 TGCTACAGTAAACCTACGCTAAT 57.413 39.130 0.00 0.00 32.87 1.73
1976 2019 5.345702 TGCTACAGTAAACCTACGCTAATG 58.654 41.667 0.00 0.00 32.87 1.90
1977 2020 5.125900 TGCTACAGTAAACCTACGCTAATGA 59.874 40.000 0.00 0.00 32.87 2.57
1978 2021 6.183360 TGCTACAGTAAACCTACGCTAATGAT 60.183 38.462 0.00 0.00 32.87 2.45
1979 2022 6.144080 GCTACAGTAAACCTACGCTAATGATG 59.856 42.308 0.00 0.00 32.87 3.07
1980 2023 6.216801 ACAGTAAACCTACGCTAATGATGA 57.783 37.500 0.00 0.00 32.87 2.92
1981 2024 6.040878 ACAGTAAACCTACGCTAATGATGAC 58.959 40.000 0.00 0.00 32.87 3.06
1982 2025 6.040247 CAGTAAACCTACGCTAATGATGACA 58.960 40.000 0.00 0.00 32.87 3.58
1983 2026 6.019801 CAGTAAACCTACGCTAATGATGACAC 60.020 42.308 0.00 0.00 32.87 3.67
1984 2027 3.079960 ACCTACGCTAATGATGACACG 57.920 47.619 0.00 0.00 0.00 4.49
1985 2028 2.426024 ACCTACGCTAATGATGACACGT 59.574 45.455 0.00 0.00 37.53 4.49
1986 2029 3.043586 CCTACGCTAATGATGACACGTC 58.956 50.000 0.00 0.00 35.15 4.34
1987 2030 2.647529 ACGCTAATGATGACACGTCA 57.352 45.000 1.71 1.71 44.59 4.35
1988 2031 2.259618 ACGCTAATGATGACACGTCAC 58.740 47.619 1.15 0.00 43.11 3.67
1989 2032 1.588404 CGCTAATGATGACACGTCACC 59.412 52.381 1.15 0.00 43.11 4.02
1990 2033 2.735444 CGCTAATGATGACACGTCACCT 60.735 50.000 1.15 0.00 43.11 4.00
1991 2034 2.860735 GCTAATGATGACACGTCACCTC 59.139 50.000 1.15 0.00 43.11 3.85
1992 2035 3.429547 GCTAATGATGACACGTCACCTCT 60.430 47.826 1.15 0.00 43.11 3.69
1993 2036 2.662006 ATGATGACACGTCACCTCTG 57.338 50.000 1.15 0.00 43.11 3.35
1994 2037 1.328279 TGATGACACGTCACCTCTGT 58.672 50.000 1.15 0.00 43.11 3.41
1995 2038 1.686587 TGATGACACGTCACCTCTGTT 59.313 47.619 1.15 0.00 43.11 3.16
1996 2039 2.888414 TGATGACACGTCACCTCTGTTA 59.112 45.455 1.15 0.00 43.11 2.41
1997 2040 3.057526 TGATGACACGTCACCTCTGTTAG 60.058 47.826 1.15 0.00 43.11 2.34
1998 2041 2.304092 TGACACGTCACCTCTGTTAGT 58.696 47.619 0.00 0.00 34.14 2.24
1999 2042 2.034179 TGACACGTCACCTCTGTTAGTG 59.966 50.000 0.00 0.00 34.14 2.74
2000 2043 2.029623 ACACGTCACCTCTGTTAGTGT 58.970 47.619 0.00 0.00 36.65 3.55
2001 2044 2.429610 ACACGTCACCTCTGTTAGTGTT 59.570 45.455 0.00 0.00 38.03 3.32
2002 2045 2.794910 CACGTCACCTCTGTTAGTGTTG 59.205 50.000 0.00 0.00 35.45 3.33
2003 2046 2.691526 ACGTCACCTCTGTTAGTGTTGA 59.308 45.455 0.00 0.00 35.45 3.18
2004 2047 3.321111 ACGTCACCTCTGTTAGTGTTGAT 59.679 43.478 0.00 0.00 35.45 2.57
2005 2048 4.521639 ACGTCACCTCTGTTAGTGTTGATA 59.478 41.667 0.00 0.00 35.45 2.15
2006 2049 5.010314 ACGTCACCTCTGTTAGTGTTGATAA 59.990 40.000 0.00 0.00 35.45 1.75
2007 2050 6.100004 CGTCACCTCTGTTAGTGTTGATAAT 58.900 40.000 0.00 0.00 35.45 1.28
2008 2051 6.253727 CGTCACCTCTGTTAGTGTTGATAATC 59.746 42.308 0.00 0.00 35.45 1.75
2009 2052 7.324178 GTCACCTCTGTTAGTGTTGATAATCT 58.676 38.462 0.00 0.00 35.45 2.40
2010 2053 7.489757 GTCACCTCTGTTAGTGTTGATAATCTC 59.510 40.741 0.00 0.00 35.45 2.75
2011 2054 6.473778 CACCTCTGTTAGTGTTGATAATCTCG 59.526 42.308 0.00 0.00 0.00 4.04
2012 2055 5.460419 CCTCTGTTAGTGTTGATAATCTCGC 59.540 44.000 0.00 0.00 0.00 5.03
2013 2056 5.034797 TCTGTTAGTGTTGATAATCTCGCG 58.965 41.667 0.00 0.00 0.00 5.87
2014 2057 4.740268 TGTTAGTGTTGATAATCTCGCGT 58.260 39.130 5.77 0.00 0.00 6.01
2015 2058 5.165676 TGTTAGTGTTGATAATCTCGCGTT 58.834 37.500 5.77 0.00 0.00 4.84
2016 2059 6.324042 TGTTAGTGTTGATAATCTCGCGTTA 58.676 36.000 5.77 0.00 0.00 3.18
2017 2060 6.471198 TGTTAGTGTTGATAATCTCGCGTTAG 59.529 38.462 5.77 0.00 0.00 2.34
2018 2061 4.995124 AGTGTTGATAATCTCGCGTTAGT 58.005 39.130 5.77 0.00 0.00 2.24
2019 2062 5.408356 AGTGTTGATAATCTCGCGTTAGTT 58.592 37.500 5.77 0.00 0.00 2.24
2020 2063 5.515626 AGTGTTGATAATCTCGCGTTAGTTC 59.484 40.000 5.77 0.00 0.00 3.01
2021 2064 5.287752 GTGTTGATAATCTCGCGTTAGTTCA 59.712 40.000 5.77 1.05 0.00 3.18
2022 2065 5.865013 TGTTGATAATCTCGCGTTAGTTCAA 59.135 36.000 5.77 7.46 0.00 2.69
2023 2066 6.366604 TGTTGATAATCTCGCGTTAGTTCAAA 59.633 34.615 5.77 0.00 0.00 2.69
2024 2067 6.954616 TGATAATCTCGCGTTAGTTCAAAA 57.045 33.333 5.77 0.00 0.00 2.44
2025 2068 6.758149 TGATAATCTCGCGTTAGTTCAAAAC 58.242 36.000 5.77 0.00 0.00 2.43
2026 2069 4.400036 AATCTCGCGTTAGTTCAAAACC 57.600 40.909 5.77 0.00 0.00 3.27
2027 2070 1.788308 TCTCGCGTTAGTTCAAAACCG 59.212 47.619 5.77 0.00 0.00 4.44
2028 2071 0.860533 TCGCGTTAGTTCAAAACCGG 59.139 50.000 5.77 0.00 0.00 5.28
2029 2072 0.860533 CGCGTTAGTTCAAAACCGGA 59.139 50.000 9.46 0.00 0.00 5.14
2030 2073 1.461897 CGCGTTAGTTCAAAACCGGAT 59.538 47.619 9.46 0.00 0.00 4.18
2031 2074 2.473376 CGCGTTAGTTCAAAACCGGATC 60.473 50.000 9.46 0.00 0.00 3.36
2032 2075 2.481185 GCGTTAGTTCAAAACCGGATCA 59.519 45.455 9.46 0.00 0.00 2.92
2033 2076 3.058777 GCGTTAGTTCAAAACCGGATCAA 60.059 43.478 9.46 0.00 0.00 2.57
2034 2077 4.555116 GCGTTAGTTCAAAACCGGATCAAA 60.555 41.667 9.46 0.00 0.00 2.69
2035 2078 5.512473 CGTTAGTTCAAAACCGGATCAAAA 58.488 37.500 9.46 0.00 0.00 2.44
2036 2079 6.146898 CGTTAGTTCAAAACCGGATCAAAAT 58.853 36.000 9.46 0.00 0.00 1.82
2037 2080 6.639279 CGTTAGTTCAAAACCGGATCAAAATT 59.361 34.615 9.46 0.00 0.00 1.82
2038 2081 7.149031 CGTTAGTTCAAAACCGGATCAAAATTC 60.149 37.037 9.46 0.00 0.00 2.17
2039 2082 6.155475 AGTTCAAAACCGGATCAAAATTCA 57.845 33.333 9.46 0.00 0.00 2.57
2040 2083 6.578023 AGTTCAAAACCGGATCAAAATTCAA 58.422 32.000 9.46 0.00 0.00 2.69
2041 2084 7.044798 AGTTCAAAACCGGATCAAAATTCAAA 58.955 30.769 9.46 0.00 0.00 2.69
2042 2085 7.714813 AGTTCAAAACCGGATCAAAATTCAAAT 59.285 29.630 9.46 0.00 0.00 2.32
2043 2086 8.341903 GTTCAAAACCGGATCAAAATTCAAATT 58.658 29.630 9.46 0.00 0.00 1.82
2044 2087 8.082334 TCAAAACCGGATCAAAATTCAAATTC 57.918 30.769 9.46 0.00 0.00 2.17
2045 2088 7.712639 TCAAAACCGGATCAAAATTCAAATTCA 59.287 29.630 9.46 0.00 0.00 2.57
2046 2089 8.341173 CAAAACCGGATCAAAATTCAAATTCAA 58.659 29.630 9.46 0.00 0.00 2.69
2047 2090 8.443953 AAACCGGATCAAAATTCAAATTCAAA 57.556 26.923 9.46 0.00 0.00 2.69
2048 2091 8.443953 AACCGGATCAAAATTCAAATTCAAAA 57.556 26.923 9.46 0.00 0.00 2.44
2049 2092 8.620116 ACCGGATCAAAATTCAAATTCAAAAT 57.380 26.923 9.46 0.00 0.00 1.82
2050 2093 9.717942 ACCGGATCAAAATTCAAATTCAAAATA 57.282 25.926 9.46 0.00 0.00 1.40
2061 2104 9.896263 ATTCAAATTCAAAATATGGCAAACAAC 57.104 25.926 0.00 0.00 0.00 3.32
2062 2105 8.442632 TCAAATTCAAAATATGGCAAACAACA 57.557 26.923 0.00 0.00 0.00 3.33
2063 2106 8.896744 TCAAATTCAAAATATGGCAAACAACAA 58.103 25.926 0.00 0.00 0.00 2.83
2064 2107 9.512435 CAAATTCAAAATATGGCAAACAACAAA 57.488 25.926 0.00 0.00 0.00 2.83
2066 2109 9.733219 AATTCAAAATATGGCAAACAACAAAAG 57.267 25.926 0.00 0.00 0.00 2.27
2067 2110 7.856145 TCAAAATATGGCAAACAACAAAAGT 57.144 28.000 0.00 0.00 0.00 2.66
2068 2111 8.273780 TCAAAATATGGCAAACAACAAAAGTT 57.726 26.923 0.00 0.00 0.00 2.66
2069 2112 8.734386 TCAAAATATGGCAAACAACAAAAGTTT 58.266 25.926 0.00 0.00 39.61 2.66
2070 2113 9.351570 CAAAATATGGCAAACAACAAAAGTTTT 57.648 25.926 0.00 0.00 37.10 2.43
2071 2114 9.566530 AAAATATGGCAAACAACAAAAGTTTTC 57.433 25.926 0.00 0.00 37.10 2.29
2072 2115 7.856145 ATATGGCAAACAACAAAAGTTTTCA 57.144 28.000 0.00 0.00 37.10 2.69
2073 2116 6.566197 ATGGCAAACAACAAAAGTTTTCAA 57.434 29.167 0.00 0.00 37.10 2.69
2074 2117 6.377327 TGGCAAACAACAAAAGTTTTCAAA 57.623 29.167 0.00 0.00 37.10 2.69
2075 2118 6.795399 TGGCAAACAACAAAAGTTTTCAAAA 58.205 28.000 0.00 0.00 37.10 2.44
2076 2119 7.257722 TGGCAAACAACAAAAGTTTTCAAAAA 58.742 26.923 0.00 0.00 37.10 1.94
2077 2120 7.922811 TGGCAAACAACAAAAGTTTTCAAAAAT 59.077 25.926 0.00 0.00 37.10 1.82
2078 2121 8.759641 GGCAAACAACAAAAGTTTTCAAAAATT 58.240 25.926 0.00 0.00 37.10 1.82
2099 2142 9.688091 AAAATTAAAACTAAAATGTTGGGGTGT 57.312 25.926 0.00 0.00 0.00 4.16
2100 2143 9.688091 AAATTAAAACTAAAATGTTGGGGTGTT 57.312 25.926 0.00 0.00 0.00 3.32
2101 2144 8.669946 ATTAAAACTAAAATGTTGGGGTGTTG 57.330 30.769 0.00 0.00 0.00 3.33
2102 2145 3.744238 ACTAAAATGTTGGGGTGTTGC 57.256 42.857 0.00 0.00 0.00 4.17
2103 2146 2.367241 ACTAAAATGTTGGGGTGTTGCC 59.633 45.455 0.00 0.00 0.00 4.52
2104 2147 1.207791 AAAATGTTGGGGTGTTGCCA 58.792 45.000 0.00 0.00 39.65 4.92
2105 2148 1.207791 AAATGTTGGGGTGTTGCCAA 58.792 45.000 0.00 0.00 39.65 4.52
2106 2149 1.207791 AATGTTGGGGTGTTGCCAAA 58.792 45.000 0.00 0.00 39.65 3.28
2107 2150 1.433121 ATGTTGGGGTGTTGCCAAAT 58.567 45.000 0.00 0.00 39.65 2.32
2108 2151 2.088104 TGTTGGGGTGTTGCCAAATA 57.912 45.000 0.00 0.00 39.65 1.40
2109 2152 2.398588 TGTTGGGGTGTTGCCAAATAA 58.601 42.857 0.00 0.00 39.65 1.40
2110 2153 2.975489 TGTTGGGGTGTTGCCAAATAAT 59.025 40.909 0.00 0.00 39.65 1.28
2111 2154 3.244353 TGTTGGGGTGTTGCCAAATAATG 60.244 43.478 0.00 0.00 39.65 1.90
2112 2155 1.277557 TGGGGTGTTGCCAAATAATGC 59.722 47.619 0.00 0.00 39.65 3.56
2113 2156 1.277557 GGGGTGTTGCCAAATAATGCA 59.722 47.619 0.00 0.00 39.65 3.96
2114 2157 2.093021 GGGGTGTTGCCAAATAATGCAT 60.093 45.455 0.00 0.00 37.33 3.96
2115 2158 3.133721 GGGGTGTTGCCAAATAATGCATA 59.866 43.478 0.00 0.00 37.33 3.14
2116 2159 4.370917 GGGTGTTGCCAAATAATGCATAG 58.629 43.478 0.00 0.00 37.33 2.23
2117 2160 4.370917 GGTGTTGCCAAATAATGCATAGG 58.629 43.478 0.00 0.00 37.33 2.57
2118 2161 4.141959 GGTGTTGCCAAATAATGCATAGGT 60.142 41.667 0.00 0.00 37.33 3.08
2119 2162 5.068460 GGTGTTGCCAAATAATGCATAGGTA 59.932 40.000 0.00 0.00 37.33 3.08
2120 2163 6.406400 GGTGTTGCCAAATAATGCATAGGTAA 60.406 38.462 0.00 0.70 37.33 2.85
2121 2164 7.209475 GTGTTGCCAAATAATGCATAGGTAAT 58.791 34.615 0.00 0.00 37.33 1.89
2122 2165 7.710475 GTGTTGCCAAATAATGCATAGGTAATT 59.290 33.333 0.00 0.00 37.33 1.40
2123 2166 8.918116 TGTTGCCAAATAATGCATAGGTAATTA 58.082 29.630 0.00 0.00 37.33 1.40
2124 2167 9.927668 GTTGCCAAATAATGCATAGGTAATTAT 57.072 29.630 0.00 0.00 37.33 1.28
2126 2169 9.926158 TGCCAAATAATGCATAGGTAATTATTG 57.074 29.630 0.00 0.00 36.86 1.90
2127 2170 9.927668 GCCAAATAATGCATAGGTAATTATTGT 57.072 29.630 0.00 0.00 36.86 2.71
2133 2176 8.995027 AATGCATAGGTAATTATTGTGGAGAA 57.005 30.769 0.00 0.00 0.00 2.87
2134 2177 8.995027 ATGCATAGGTAATTATTGTGGAGAAA 57.005 30.769 0.00 0.00 0.00 2.52
2135 2178 8.220755 TGCATAGGTAATTATTGTGGAGAAAC 57.779 34.615 0.00 0.00 0.00 2.78
2136 2179 7.284489 TGCATAGGTAATTATTGTGGAGAAACC 59.716 37.037 0.00 0.00 39.54 3.27
2152 2195 7.891561 TGGAGAAACCACACCTTTATAAAATG 58.108 34.615 0.00 3.82 44.64 2.32
2153 2196 7.507616 TGGAGAAACCACACCTTTATAAAATGT 59.492 33.333 8.35 8.35 44.64 2.71
2154 2197 8.364894 GGAGAAACCACACCTTTATAAAATGTT 58.635 33.333 10.62 0.17 38.79 2.71
2155 2198 9.758651 GAGAAACCACACCTTTATAAAATGTTT 57.241 29.630 10.62 8.25 0.00 2.83
2268 2311 3.302365 CCAAGTTAATTGTGGCAGTGG 57.698 47.619 0.00 0.00 37.17 4.00
2269 2312 2.627699 CCAAGTTAATTGTGGCAGTGGT 59.372 45.455 0.00 0.00 37.17 4.16
2270 2313 3.823873 CCAAGTTAATTGTGGCAGTGGTA 59.176 43.478 0.00 0.00 37.17 3.25
2271 2314 4.462483 CCAAGTTAATTGTGGCAGTGGTAT 59.538 41.667 0.00 0.00 37.17 2.73
2272 2315 5.650266 CCAAGTTAATTGTGGCAGTGGTATA 59.350 40.000 0.00 0.00 37.17 1.47
2273 2316 6.151985 CCAAGTTAATTGTGGCAGTGGTATAA 59.848 38.462 0.00 0.00 37.17 0.98
2274 2317 7.147915 CCAAGTTAATTGTGGCAGTGGTATAAT 60.148 37.037 0.00 0.00 37.17 1.28
2275 2318 7.954666 AGTTAATTGTGGCAGTGGTATAATT 57.045 32.000 0.00 0.00 0.00 1.40
2276 2319 9.469097 AAGTTAATTGTGGCAGTGGTATAATTA 57.531 29.630 0.00 0.00 0.00 1.40
2277 2320 8.899771 AGTTAATTGTGGCAGTGGTATAATTAC 58.100 33.333 0.00 0.00 0.00 1.89
2278 2321 8.899771 GTTAATTGTGGCAGTGGTATAATTACT 58.100 33.333 0.00 0.00 0.00 2.24
2281 2324 9.640952 AATTGTGGCAGTGGTATAATTACTATT 57.359 29.630 0.00 0.00 0.00 1.73
2283 2326 9.550406 TTGTGGCAGTGGTATAATTACTATTAC 57.450 33.333 0.00 0.00 0.00 1.89
2284 2327 8.930527 TGTGGCAGTGGTATAATTACTATTACT 58.069 33.333 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
535 540 1.664321 GCTCCAGCTCCAATGCCAAG 61.664 60.000 0.00 0.00 38.21 3.61
728 736 3.749226 TGCACACAATACATGGAGTCAA 58.251 40.909 0.00 0.00 0.00 3.18
739 747 3.023832 TCTCCTCGATCTGCACACAATA 58.976 45.455 0.00 0.00 0.00 1.90
813 821 2.100631 CACAACCTCGTCGGGCATC 61.101 63.158 0.00 0.00 36.97 3.91
876 884 2.678580 TCCATGCCCTCGTCGTCA 60.679 61.111 0.00 0.00 0.00 4.35
951 960 2.533266 TGACCTTGCAGAAGTGAGTC 57.467 50.000 0.00 0.00 0.00 3.36
1070 1080 1.152312 ACCGTCACCTTCCAGGAGT 60.152 57.895 0.00 0.00 37.67 3.85
1155 1165 2.738643 CGTCACCATGTAGCCGATCTTT 60.739 50.000 0.00 0.00 0.00 2.52
1220 1230 1.766143 GACCTCAATGCCATCGTCGC 61.766 60.000 0.00 0.00 0.00 5.19
1322 1332 9.153721 CATAAACCATAAACATGTTCAAAGCAT 57.846 29.630 12.39 0.00 0.00 3.79
1460 1471 3.595190 AACCTCTTTGGCTAGTTGGTT 57.405 42.857 0.00 0.00 40.22 3.67
1543 1554 2.027460 GCCTGGTGTTTGGTTGCG 59.973 61.111 0.00 0.00 0.00 4.85
1583 1610 1.679944 GGTTGCCTGCATGCTCTCTTA 60.680 52.381 20.33 0.00 0.00 2.10
1589 1616 1.368579 GTTTGGTTGCCTGCATGCT 59.631 52.632 20.33 0.00 0.00 3.79
1590 1617 0.532417 TTGTTTGGTTGCCTGCATGC 60.532 50.000 11.82 11.82 0.00 4.06
1621 1664 1.674817 GCAAATGCAGCCTCAAATGCT 60.675 47.619 0.00 0.00 42.98 3.79
1677 1720 2.126228 GCCGTGCGCTACAGTACA 60.126 61.111 9.73 0.00 0.00 2.90
1709 1752 4.459852 AGAATAGGCCTGCAACCATATT 57.540 40.909 17.99 3.82 0.00 1.28
1711 1754 4.746702 GCTTAGAATAGGCCTGCAACCATA 60.747 45.833 17.99 0.00 37.77 2.74
1715 1758 2.615912 CTGCTTAGAATAGGCCTGCAAC 59.384 50.000 17.99 4.15 43.92 4.17
1716 1759 2.505407 TCTGCTTAGAATAGGCCTGCAA 59.495 45.455 17.99 0.00 43.92 4.08
1717 1760 2.118679 TCTGCTTAGAATAGGCCTGCA 58.881 47.619 17.99 13.74 43.92 4.41
1718 1761 2.918712 TCTGCTTAGAATAGGCCTGC 57.081 50.000 17.99 9.01 43.92 4.85
1719 1762 3.072944 GCATCTGCTTAGAATAGGCCTG 58.927 50.000 17.99 0.00 43.92 4.85
1720 1763 2.707791 TGCATCTGCTTAGAATAGGCCT 59.292 45.455 11.78 11.78 43.92 5.19
1721 1764 3.072944 CTGCATCTGCTTAGAATAGGCC 58.927 50.000 0.00 0.00 43.92 5.19
1722 1765 4.000331 TCTGCATCTGCTTAGAATAGGC 58.000 45.455 3.53 0.00 44.92 3.93
1723 1766 5.996513 ACATTCTGCATCTGCTTAGAATAGG 59.003 40.000 14.02 8.30 39.95 2.57
1724 1767 7.353497 CAACATTCTGCATCTGCTTAGAATAG 58.647 38.462 14.02 11.74 39.95 1.73
1725 1768 6.261603 CCAACATTCTGCATCTGCTTAGAATA 59.738 38.462 14.02 0.00 39.95 1.75
1726 1769 5.067413 CCAACATTCTGCATCTGCTTAGAAT 59.933 40.000 10.38 10.38 41.51 2.40
1727 1770 4.397103 CCAACATTCTGCATCTGCTTAGAA 59.603 41.667 3.53 5.68 42.66 2.10
1728 1771 3.943381 CCAACATTCTGCATCTGCTTAGA 59.057 43.478 3.53 0.00 42.66 2.10
1729 1772 3.693085 ACCAACATTCTGCATCTGCTTAG 59.307 43.478 3.53 0.00 42.66 2.18
1730 1773 3.441222 CACCAACATTCTGCATCTGCTTA 59.559 43.478 3.53 0.00 42.66 3.09
1731 1774 2.230508 CACCAACATTCTGCATCTGCTT 59.769 45.455 3.53 0.00 42.66 3.91
1732 1775 1.816835 CACCAACATTCTGCATCTGCT 59.183 47.619 3.53 0.00 42.66 4.24
1733 1776 1.542915 ACACCAACATTCTGCATCTGC 59.457 47.619 0.00 0.00 42.50 4.26
1734 1777 3.928727 AACACCAACATTCTGCATCTG 57.071 42.857 0.00 0.00 0.00 2.90
1735 1778 6.594788 ATTAAACACCAACATTCTGCATCT 57.405 33.333 0.00 0.00 0.00 2.90
1736 1779 7.812191 TGTAATTAAACACCAACATTCTGCATC 59.188 33.333 0.00 0.00 0.00 3.91
1737 1780 7.665690 TGTAATTAAACACCAACATTCTGCAT 58.334 30.769 0.00 0.00 0.00 3.96
1738 1781 7.043961 TGTAATTAAACACCAACATTCTGCA 57.956 32.000 0.00 0.00 0.00 4.41
1739 1782 7.411804 GCATGTAATTAAACACCAACATTCTGC 60.412 37.037 0.00 0.00 30.75 4.26
1740 1783 7.598118 TGCATGTAATTAAACACCAACATTCTG 59.402 33.333 0.00 0.00 30.75 3.02
1741 1784 7.665690 TGCATGTAATTAAACACCAACATTCT 58.334 30.769 0.00 0.00 30.75 2.40
1742 1785 7.881643 TGCATGTAATTAAACACCAACATTC 57.118 32.000 0.00 0.00 30.75 2.67
1743 1786 7.712639 TGTTGCATGTAATTAAACACCAACATT 59.287 29.630 17.17 0.00 43.07 2.71
1744 1787 7.212976 TGTTGCATGTAATTAAACACCAACAT 58.787 30.769 17.17 3.87 43.07 2.71
1745 1788 6.573434 TGTTGCATGTAATTAAACACCAACA 58.427 32.000 17.17 17.17 44.25 3.33
1746 1789 6.346518 GCTGTTGCATGTAATTAAACACCAAC 60.347 38.462 14.13 14.13 41.08 3.77
1747 1790 5.694006 GCTGTTGCATGTAATTAAACACCAA 59.306 36.000 0.00 0.00 39.41 3.67
1748 1791 5.226396 GCTGTTGCATGTAATTAAACACCA 58.774 37.500 0.00 0.00 39.41 4.17
1749 1792 4.323336 CGCTGTTGCATGTAATTAAACACC 59.677 41.667 0.00 0.00 39.64 4.16
1750 1793 4.323336 CCGCTGTTGCATGTAATTAAACAC 59.677 41.667 0.00 0.00 39.64 3.32
1751 1794 4.022762 ACCGCTGTTGCATGTAATTAAACA 60.023 37.500 0.00 0.00 39.64 2.83
1752 1795 4.323336 CACCGCTGTTGCATGTAATTAAAC 59.677 41.667 0.00 0.00 39.64 2.01
1753 1796 4.216472 TCACCGCTGTTGCATGTAATTAAA 59.784 37.500 0.00 0.00 39.64 1.52
1754 1797 3.753797 TCACCGCTGTTGCATGTAATTAA 59.246 39.130 0.00 0.00 39.64 1.40
1755 1798 3.339141 TCACCGCTGTTGCATGTAATTA 58.661 40.909 0.00 0.00 39.64 1.40
1756 1799 2.158559 TCACCGCTGTTGCATGTAATT 58.841 42.857 0.00 0.00 39.64 1.40
1757 1800 1.819928 TCACCGCTGTTGCATGTAAT 58.180 45.000 0.00 0.00 39.64 1.89
1758 1801 1.598882 TTCACCGCTGTTGCATGTAA 58.401 45.000 0.00 0.00 39.64 2.41
1759 1802 1.598882 TTTCACCGCTGTTGCATGTA 58.401 45.000 0.00 0.00 39.64 2.29
1760 1803 0.961019 ATTTCACCGCTGTTGCATGT 59.039 45.000 0.00 0.00 39.64 3.21
1761 1804 2.095314 TGTATTTCACCGCTGTTGCATG 60.095 45.455 0.00 0.00 39.64 4.06
1762 1805 2.158559 TGTATTTCACCGCTGTTGCAT 58.841 42.857 0.00 0.00 39.64 3.96
1763 1806 1.598882 TGTATTTCACCGCTGTTGCA 58.401 45.000 0.00 0.00 39.64 4.08
1764 1807 2.584791 CTTGTATTTCACCGCTGTTGC 58.415 47.619 0.00 0.00 0.00 4.17
1765 1808 2.095263 CCCTTGTATTTCACCGCTGTTG 60.095 50.000 0.00 0.00 0.00 3.33
1766 1809 2.159382 CCCTTGTATTTCACCGCTGTT 58.841 47.619 0.00 0.00 0.00 3.16
1767 1810 1.613255 CCCCTTGTATTTCACCGCTGT 60.613 52.381 0.00 0.00 0.00 4.40
1768 1811 1.094785 CCCCTTGTATTTCACCGCTG 58.905 55.000 0.00 0.00 0.00 5.18
1769 1812 0.679960 GCCCCTTGTATTTCACCGCT 60.680 55.000 0.00 0.00 0.00 5.52
1770 1813 0.679960 AGCCCCTTGTATTTCACCGC 60.680 55.000 0.00 0.00 0.00 5.68
1771 1814 2.702592 TAGCCCCTTGTATTTCACCG 57.297 50.000 0.00 0.00 0.00 4.94
1772 1815 5.420739 TCAAAATAGCCCCTTGTATTTCACC 59.579 40.000 0.00 0.00 30.22 4.02
1773 1816 6.071616 TGTCAAAATAGCCCCTTGTATTTCAC 60.072 38.462 0.00 0.00 30.22 3.18
1774 1817 6.013379 TGTCAAAATAGCCCCTTGTATTTCA 58.987 36.000 0.00 0.00 30.22 2.69
1775 1818 6.524101 TGTCAAAATAGCCCCTTGTATTTC 57.476 37.500 0.00 0.00 30.22 2.17
1776 1819 6.070824 CCTTGTCAAAATAGCCCCTTGTATTT 60.071 38.462 0.00 0.00 31.52 1.40
1777 1820 5.422012 CCTTGTCAAAATAGCCCCTTGTATT 59.578 40.000 0.00 0.00 0.00 1.89
1778 1821 4.956075 CCTTGTCAAAATAGCCCCTTGTAT 59.044 41.667 0.00 0.00 0.00 2.29
1779 1822 4.043561 TCCTTGTCAAAATAGCCCCTTGTA 59.956 41.667 0.00 0.00 0.00 2.41
1780 1823 3.165071 CCTTGTCAAAATAGCCCCTTGT 58.835 45.455 0.00 0.00 0.00 3.16
1781 1824 3.430453 TCCTTGTCAAAATAGCCCCTTG 58.570 45.455 0.00 0.00 0.00 3.61
1782 1825 3.701664 CTCCTTGTCAAAATAGCCCCTT 58.298 45.455 0.00 0.00 0.00 3.95
1783 1826 2.621668 GCTCCTTGTCAAAATAGCCCCT 60.622 50.000 3.25 0.00 0.00 4.79
1784 1827 1.751351 GCTCCTTGTCAAAATAGCCCC 59.249 52.381 3.25 0.00 0.00 5.80
1785 1828 2.446435 TGCTCCTTGTCAAAATAGCCC 58.554 47.619 9.69 0.00 0.00 5.19
1786 1829 3.736126 GCATGCTCCTTGTCAAAATAGCC 60.736 47.826 11.37 0.00 0.00 3.93
1787 1830 3.129988 AGCATGCTCCTTGTCAAAATAGC 59.870 43.478 16.30 6.54 0.00 2.97
1788 1831 4.978083 AGCATGCTCCTTGTCAAAATAG 57.022 40.909 16.30 0.00 0.00 1.73
1789 1832 6.359804 AGATAGCATGCTCCTTGTCAAAATA 58.640 36.000 26.57 1.20 0.00 1.40
1790 1833 5.198965 AGATAGCATGCTCCTTGTCAAAAT 58.801 37.500 26.57 7.82 0.00 1.82
1791 1834 4.592942 AGATAGCATGCTCCTTGTCAAAA 58.407 39.130 26.57 2.07 0.00 2.44
1792 1835 4.226427 AGATAGCATGCTCCTTGTCAAA 57.774 40.909 26.57 2.95 0.00 2.69
1793 1836 3.920231 AGATAGCATGCTCCTTGTCAA 57.080 42.857 26.57 3.83 0.00 3.18
1794 1837 4.597404 CTAGATAGCATGCTCCTTGTCA 57.403 45.455 26.57 4.73 0.00 3.58
1808 1851 5.736951 AAAGTCATGCCCTAGCTAGATAG 57.263 43.478 22.70 8.10 40.80 2.08
1809 1852 6.209589 CACTAAAGTCATGCCCTAGCTAGATA 59.790 42.308 22.70 8.06 40.80 1.98
1810 1853 5.011533 CACTAAAGTCATGCCCTAGCTAGAT 59.988 44.000 22.70 4.94 40.80 1.98
1811 1854 4.342378 CACTAAAGTCATGCCCTAGCTAGA 59.658 45.833 22.70 2.39 40.80 2.43
1812 1855 4.100189 ACACTAAAGTCATGCCCTAGCTAG 59.900 45.833 14.20 14.20 40.80 3.42
1813 1856 4.030913 ACACTAAAGTCATGCCCTAGCTA 58.969 43.478 0.00 0.00 40.80 3.32
1814 1857 2.840651 ACACTAAAGTCATGCCCTAGCT 59.159 45.455 0.00 0.00 40.80 3.32
1815 1858 2.939103 CACACTAAAGTCATGCCCTAGC 59.061 50.000 0.00 0.00 40.48 3.42
1816 1859 3.535561 CCACACTAAAGTCATGCCCTAG 58.464 50.000 0.00 0.00 0.00 3.02
1817 1860 2.238646 CCCACACTAAAGTCATGCCCTA 59.761 50.000 0.00 0.00 0.00 3.53
1818 1861 1.004745 CCCACACTAAAGTCATGCCCT 59.995 52.381 0.00 0.00 0.00 5.19
1819 1862 1.463674 CCCACACTAAAGTCATGCCC 58.536 55.000 0.00 0.00 0.00 5.36
1820 1863 1.463674 CCCCACACTAAAGTCATGCC 58.536 55.000 0.00 0.00 0.00 4.40
1821 1864 0.811281 GCCCCACACTAAAGTCATGC 59.189 55.000 0.00 0.00 0.00 4.06
1822 1865 2.496899 AGCCCCACACTAAAGTCATG 57.503 50.000 0.00 0.00 0.00 3.07
1823 1866 3.136626 GGATAGCCCCACACTAAAGTCAT 59.863 47.826 0.00 0.00 0.00 3.06
1824 1867 2.504175 GGATAGCCCCACACTAAAGTCA 59.496 50.000 0.00 0.00 0.00 3.41
1825 1868 2.504175 TGGATAGCCCCACACTAAAGTC 59.496 50.000 0.00 0.00 0.00 3.01
1826 1869 2.557869 TGGATAGCCCCACACTAAAGT 58.442 47.619 0.00 0.00 0.00 2.66
1827 1870 3.199946 TCTTGGATAGCCCCACACTAAAG 59.800 47.826 0.00 0.00 35.62 1.85
1828 1871 3.186283 TCTTGGATAGCCCCACACTAAA 58.814 45.455 0.00 0.00 35.62 1.85
1829 1872 2.771943 CTCTTGGATAGCCCCACACTAA 59.228 50.000 0.00 0.00 35.62 2.24
1830 1873 2.292918 ACTCTTGGATAGCCCCACACTA 60.293 50.000 0.00 0.00 35.62 2.74
1831 1874 1.207791 CTCTTGGATAGCCCCACACT 58.792 55.000 0.00 0.00 35.62 3.55
1832 1875 0.912486 ACTCTTGGATAGCCCCACAC 59.088 55.000 0.00 0.00 35.62 3.82
1833 1876 0.911769 CACTCTTGGATAGCCCCACA 59.088 55.000 0.00 0.00 35.62 4.17
1834 1877 1.204146 TCACTCTTGGATAGCCCCAC 58.796 55.000 0.00 0.00 35.62 4.61
1835 1878 1.965414 TTCACTCTTGGATAGCCCCA 58.035 50.000 0.00 0.00 0.00 4.96
1836 1879 3.366052 TTTTCACTCTTGGATAGCCCC 57.634 47.619 0.00 0.00 0.00 5.80
1837 1880 5.921962 AAATTTTCACTCTTGGATAGCCC 57.078 39.130 0.00 0.00 0.00 5.19
1838 1881 7.093945 TGGTAAAATTTTCACTCTTGGATAGCC 60.094 37.037 6.72 0.00 0.00 3.93
1839 1882 7.826690 TGGTAAAATTTTCACTCTTGGATAGC 58.173 34.615 6.72 0.00 0.00 2.97
1840 1883 9.793252 CATGGTAAAATTTTCACTCTTGGATAG 57.207 33.333 6.72 0.00 0.00 2.08
1841 1884 8.250332 GCATGGTAAAATTTTCACTCTTGGATA 58.750 33.333 6.72 0.00 0.00 2.59
1842 1885 7.099120 GCATGGTAAAATTTTCACTCTTGGAT 58.901 34.615 6.72 0.00 0.00 3.41
1843 1886 6.041409 TGCATGGTAAAATTTTCACTCTTGGA 59.959 34.615 6.72 3.48 0.00 3.53
1844 1887 6.222389 TGCATGGTAAAATTTTCACTCTTGG 58.778 36.000 6.72 0.00 0.00 3.61
1845 1888 7.894376 ATGCATGGTAAAATTTTCACTCTTG 57.106 32.000 6.72 5.72 0.00 3.02
1846 1889 8.776470 CAAATGCATGGTAAAATTTTCACTCTT 58.224 29.630 6.72 0.00 0.00 2.85
1847 1890 7.388500 CCAAATGCATGGTAAAATTTTCACTCT 59.612 33.333 6.72 0.00 35.65 3.24
1848 1891 7.520686 CCAAATGCATGGTAAAATTTTCACTC 58.479 34.615 6.72 0.00 35.65 3.51
1849 1892 7.437793 CCAAATGCATGGTAAAATTTTCACT 57.562 32.000 6.72 0.00 35.65 3.41
1862 1905 2.094803 TCGCAAAGTACCAAATGCATGG 60.095 45.455 0.00 1.38 46.38 3.66
1863 1906 3.214697 TCGCAAAGTACCAAATGCATG 57.785 42.857 0.00 0.00 38.69 4.06
1864 1907 3.443329 TCATCGCAAAGTACCAAATGCAT 59.557 39.130 0.00 0.00 38.69 3.96
1865 1908 2.816672 TCATCGCAAAGTACCAAATGCA 59.183 40.909 0.00 0.00 38.69 3.96
1866 1909 3.171277 GTCATCGCAAAGTACCAAATGC 58.829 45.455 0.00 0.00 35.49 3.56
1867 1910 3.190327 TGGTCATCGCAAAGTACCAAATG 59.810 43.478 0.00 0.00 37.29 2.32
1868 1911 3.190535 GTGGTCATCGCAAAGTACCAAAT 59.809 43.478 0.00 0.00 41.65 2.32
1869 1912 2.550606 GTGGTCATCGCAAAGTACCAAA 59.449 45.455 0.00 0.00 41.65 3.28
1870 1913 2.147958 GTGGTCATCGCAAAGTACCAA 58.852 47.619 0.00 0.00 41.65 3.67
1871 1914 1.803334 GTGGTCATCGCAAAGTACCA 58.197 50.000 0.00 0.00 37.88 3.25
1872 1915 0.719465 CGTGGTCATCGCAAAGTACC 59.281 55.000 0.00 0.00 0.00 3.34
1873 1916 1.654105 CTCGTGGTCATCGCAAAGTAC 59.346 52.381 0.00 0.00 0.00 2.73
1874 1917 1.271379 ACTCGTGGTCATCGCAAAGTA 59.729 47.619 0.00 0.00 0.00 2.24
1875 1918 0.033504 ACTCGTGGTCATCGCAAAGT 59.966 50.000 0.00 0.00 0.00 2.66
1876 1919 1.654105 GTACTCGTGGTCATCGCAAAG 59.346 52.381 0.00 0.00 0.00 2.77
1877 1920 1.271379 AGTACTCGTGGTCATCGCAAA 59.729 47.619 0.00 0.00 0.00 3.68
1878 1921 0.885879 AGTACTCGTGGTCATCGCAA 59.114 50.000 0.00 0.00 0.00 4.85
1879 1922 0.450583 GAGTACTCGTGGTCATCGCA 59.549 55.000 7.22 0.00 0.00 5.10
1880 1923 0.589229 CGAGTACTCGTGGTCATCGC 60.589 60.000 32.24 0.00 46.99 4.58
1881 1924 3.511012 CGAGTACTCGTGGTCATCG 57.489 57.895 32.24 8.88 46.99 3.84
1891 1934 9.649024 GTTGTCTGTATTACTAATCGAGTACTC 57.351 37.037 13.18 13.18 40.50 2.59
1892 1935 9.170734 TGTTGTCTGTATTACTAATCGAGTACT 57.829 33.333 0.00 0.00 40.50 2.73
1893 1936 9.219497 GTGTTGTCTGTATTACTAATCGAGTAC 57.781 37.037 0.00 0.00 40.50 2.73
1894 1937 8.949177 TGTGTTGTCTGTATTACTAATCGAGTA 58.051 33.333 0.00 0.00 39.81 2.59
1895 1938 7.823665 TGTGTTGTCTGTATTACTAATCGAGT 58.176 34.615 0.00 0.00 42.69 4.18
1896 1939 8.746751 CATGTGTTGTCTGTATTACTAATCGAG 58.253 37.037 0.00 0.00 0.00 4.04
1897 1940 8.463607 TCATGTGTTGTCTGTATTACTAATCGA 58.536 33.333 0.00 0.00 0.00 3.59
1898 1941 8.628882 TCATGTGTTGTCTGTATTACTAATCG 57.371 34.615 0.00 0.00 0.00 3.34
1899 1942 9.587772 ACTCATGTGTTGTCTGTATTACTAATC 57.412 33.333 0.00 0.00 0.00 1.75
1900 1943 9.944376 AACTCATGTGTTGTCTGTATTACTAAT 57.056 29.630 12.15 0.00 0.00 1.73
1903 1946 9.944376 ATTAACTCATGTGTTGTCTGTATTACT 57.056 29.630 20.54 0.00 0.00 2.24
1909 1952 9.897744 CAAAATATTAACTCATGTGTTGTCTGT 57.102 29.630 20.54 6.79 0.00 3.41
1910 1953 9.897744 ACAAAATATTAACTCATGTGTTGTCTG 57.102 29.630 20.54 11.20 0.00 3.51
1911 1954 9.897744 CACAAAATATTAACTCATGTGTTGTCT 57.102 29.630 20.54 9.20 33.76 3.41
1912 1955 9.891828 TCACAAAATATTAACTCATGTGTTGTC 57.108 29.630 20.54 0.00 38.22 3.18
1913 1956 9.677567 GTCACAAAATATTAACTCATGTGTTGT 57.322 29.630 20.54 12.57 38.22 3.32
1914 1957 8.839914 CGTCACAAAATATTAACTCATGTGTTG 58.160 33.333 20.54 6.86 38.22 3.33
1915 1958 7.537306 GCGTCACAAAATATTAACTCATGTGTT 59.463 33.333 16.63 16.63 38.22 3.32
1916 1959 7.021196 GCGTCACAAAATATTAACTCATGTGT 58.979 34.615 0.00 0.00 38.22 3.72
1917 1960 6.468956 GGCGTCACAAAATATTAACTCATGTG 59.531 38.462 0.00 0.00 38.36 3.21
1918 1961 6.404293 GGGCGTCACAAAATATTAACTCATGT 60.404 38.462 0.00 0.00 0.00 3.21
1919 1962 5.971202 GGGCGTCACAAAATATTAACTCATG 59.029 40.000 0.00 0.00 0.00 3.07
1920 1963 5.220777 CGGGCGTCACAAAATATTAACTCAT 60.221 40.000 0.00 0.00 0.00 2.90
1921 1964 4.093703 CGGGCGTCACAAAATATTAACTCA 59.906 41.667 0.00 0.00 0.00 3.41
1922 1965 4.495184 CCGGGCGTCACAAAATATTAACTC 60.495 45.833 0.00 0.00 0.00 3.01
1923 1966 3.375922 CCGGGCGTCACAAAATATTAACT 59.624 43.478 0.00 0.00 0.00 2.24
1924 1967 3.374678 TCCGGGCGTCACAAAATATTAAC 59.625 43.478 0.00 0.00 0.00 2.01
1925 1968 3.607741 TCCGGGCGTCACAAAATATTAA 58.392 40.909 0.00 0.00 0.00 1.40
1926 1969 3.263489 TCCGGGCGTCACAAAATATTA 57.737 42.857 0.00 0.00 0.00 0.98
1927 1970 2.116827 TCCGGGCGTCACAAAATATT 57.883 45.000 0.00 0.00 0.00 1.28
1928 1971 2.341846 ATCCGGGCGTCACAAAATAT 57.658 45.000 0.00 0.00 0.00 1.28
1929 1972 2.983907 TATCCGGGCGTCACAAAATA 57.016 45.000 0.00 0.00 0.00 1.40
1930 1973 2.116827 TTATCCGGGCGTCACAAAAT 57.883 45.000 0.00 0.00 0.00 1.82
1931 1974 2.116827 ATTATCCGGGCGTCACAAAA 57.883 45.000 0.00 0.00 0.00 2.44
1932 1975 2.116827 AATTATCCGGGCGTCACAAA 57.883 45.000 0.00 0.00 0.00 2.83
1933 1976 2.983907 TAATTATCCGGGCGTCACAA 57.016 45.000 0.00 0.00 0.00 3.33
1934 1977 2.761559 CATAATTATCCGGGCGTCACA 58.238 47.619 0.00 0.00 0.00 3.58
1935 1978 1.463444 GCATAATTATCCGGGCGTCAC 59.537 52.381 0.00 0.00 0.00 3.67
1936 1979 1.346395 AGCATAATTATCCGGGCGTCA 59.654 47.619 0.00 0.00 0.00 4.35
1937 1980 2.094762 AGCATAATTATCCGGGCGTC 57.905 50.000 0.00 0.00 0.00 5.19
1938 1981 2.300723 TGTAGCATAATTATCCGGGCGT 59.699 45.455 0.00 0.00 0.00 5.68
1939 1982 2.930040 CTGTAGCATAATTATCCGGGCG 59.070 50.000 0.00 0.00 0.00 6.13
1940 1983 3.939066 ACTGTAGCATAATTATCCGGGC 58.061 45.455 0.00 0.00 0.00 6.13
1941 1984 6.370718 GGTTTACTGTAGCATAATTATCCGGG 59.629 42.308 0.00 0.00 0.00 5.73
1942 1985 7.159372 AGGTTTACTGTAGCATAATTATCCGG 58.841 38.462 0.00 0.00 0.00 5.14
1943 1986 9.136952 GTAGGTTTACTGTAGCATAATTATCCG 57.863 37.037 0.00 0.00 0.00 4.18
1944 1987 9.136952 CGTAGGTTTACTGTAGCATAATTATCC 57.863 37.037 0.00 0.00 0.00 2.59
1945 1988 8.645487 GCGTAGGTTTACTGTAGCATAATTATC 58.355 37.037 0.00 0.00 0.00 1.75
1946 1989 8.365647 AGCGTAGGTTTACTGTAGCATAATTAT 58.634 33.333 0.00 0.00 27.67 1.28
1947 1990 7.719483 AGCGTAGGTTTACTGTAGCATAATTA 58.281 34.615 0.00 0.00 27.67 1.40
1948 1991 6.579865 AGCGTAGGTTTACTGTAGCATAATT 58.420 36.000 0.00 0.00 27.67 1.40
1949 1992 6.158023 AGCGTAGGTTTACTGTAGCATAAT 57.842 37.500 0.00 0.00 27.67 1.28
1950 1993 5.587388 AGCGTAGGTTTACTGTAGCATAA 57.413 39.130 0.00 0.00 27.67 1.90
1951 1994 6.698008 TTAGCGTAGGTTTACTGTAGCATA 57.302 37.500 0.00 0.00 40.68 3.14
1952 1995 5.587388 TTAGCGTAGGTTTACTGTAGCAT 57.413 39.130 0.00 0.00 40.68 3.79
1953 1996 5.125900 TCATTAGCGTAGGTTTACTGTAGCA 59.874 40.000 0.00 0.00 40.68 3.49
1954 1997 5.585390 TCATTAGCGTAGGTTTACTGTAGC 58.415 41.667 0.00 0.00 40.68 3.58
1955 1998 7.378995 GTCATCATTAGCGTAGGTTTACTGTAG 59.621 40.741 0.00 0.00 40.68 2.74
1956 1999 7.148035 TGTCATCATTAGCGTAGGTTTACTGTA 60.148 37.037 0.00 0.00 40.68 2.74
1957 2000 6.040878 GTCATCATTAGCGTAGGTTTACTGT 58.959 40.000 0.00 0.00 40.68 3.55
1958 2001 6.019801 GTGTCATCATTAGCGTAGGTTTACTG 60.020 42.308 0.00 0.00 40.68 2.74
1959 2002 6.040878 GTGTCATCATTAGCGTAGGTTTACT 58.959 40.000 0.00 0.00 40.68 2.24
1960 2003 5.051907 CGTGTCATCATTAGCGTAGGTTTAC 60.052 44.000 0.00 0.00 40.68 2.01
1961 2004 5.038683 CGTGTCATCATTAGCGTAGGTTTA 58.961 41.667 0.00 0.00 40.68 2.01
1962 2005 3.863424 CGTGTCATCATTAGCGTAGGTTT 59.137 43.478 0.00 0.00 40.68 3.27
1963 2006 3.119245 ACGTGTCATCATTAGCGTAGGTT 60.119 43.478 0.00 0.00 40.68 3.50
1964 2007 2.426024 ACGTGTCATCATTAGCGTAGGT 59.574 45.455 0.00 0.00 44.89 3.08
1965 2008 3.043586 GACGTGTCATCATTAGCGTAGG 58.956 50.000 0.00 0.00 32.56 3.18
1966 2009 3.482472 GTGACGTGTCATCATTAGCGTAG 59.518 47.826 5.91 0.00 42.18 3.51
1967 2010 3.431856 GTGACGTGTCATCATTAGCGTA 58.568 45.455 5.91 0.00 42.18 4.42
1968 2011 2.259618 GTGACGTGTCATCATTAGCGT 58.740 47.619 5.91 0.00 42.18 5.07
1969 2012 1.588404 GGTGACGTGTCATCATTAGCG 59.412 52.381 8.35 0.00 42.18 4.26
1970 2013 2.860735 GAGGTGACGTGTCATCATTAGC 59.139 50.000 15.13 0.00 42.98 3.09
1971 2014 4.108336 CAGAGGTGACGTGTCATCATTAG 58.892 47.826 15.13 0.00 42.98 1.73
1972 2015 3.509967 ACAGAGGTGACGTGTCATCATTA 59.490 43.478 15.13 0.00 42.98 1.90
1973 2016 2.300152 ACAGAGGTGACGTGTCATCATT 59.700 45.455 15.13 0.47 42.98 2.57
1974 2017 1.895798 ACAGAGGTGACGTGTCATCAT 59.104 47.619 15.13 3.25 42.98 2.45
1975 2018 1.328279 ACAGAGGTGACGTGTCATCA 58.672 50.000 15.13 0.00 42.98 3.07
1976 2019 2.440539 AACAGAGGTGACGTGTCATC 57.559 50.000 5.91 5.50 42.18 2.92
1977 2020 2.891580 ACTAACAGAGGTGACGTGTCAT 59.108 45.455 5.91 0.00 42.18 3.06
1978 2021 2.034179 CACTAACAGAGGTGACGTGTCA 59.966 50.000 0.00 0.00 35.69 3.58
1979 2022 2.034305 ACACTAACAGAGGTGACGTGTC 59.966 50.000 0.00 0.00 37.22 3.67
1980 2023 2.029623 ACACTAACAGAGGTGACGTGT 58.970 47.619 0.00 0.00 37.22 4.49
1981 2024 2.794910 CAACACTAACAGAGGTGACGTG 59.205 50.000 0.00 0.00 37.22 4.49
1982 2025 2.691526 TCAACACTAACAGAGGTGACGT 59.308 45.455 0.00 0.00 37.22 4.34
1983 2026 3.364889 TCAACACTAACAGAGGTGACG 57.635 47.619 0.00 0.00 37.22 4.35
1984 2027 7.324178 AGATTATCAACACTAACAGAGGTGAC 58.676 38.462 0.00 0.00 37.22 3.67
1985 2028 7.482169 AGATTATCAACACTAACAGAGGTGA 57.518 36.000 0.00 0.00 37.22 4.02
1986 2029 6.473778 CGAGATTATCAACACTAACAGAGGTG 59.526 42.308 0.00 0.00 39.13 4.00
1987 2030 6.565234 CGAGATTATCAACACTAACAGAGGT 58.435 40.000 0.00 0.00 0.00 3.85
1988 2031 5.460419 GCGAGATTATCAACACTAACAGAGG 59.540 44.000 0.00 0.00 0.00 3.69
1989 2032 5.172232 CGCGAGATTATCAACACTAACAGAG 59.828 44.000 0.00 0.00 0.00 3.35
1990 2033 5.034797 CGCGAGATTATCAACACTAACAGA 58.965 41.667 0.00 0.00 0.00 3.41
1991 2034 4.798907 ACGCGAGATTATCAACACTAACAG 59.201 41.667 15.93 0.00 0.00 3.16
1992 2035 4.740268 ACGCGAGATTATCAACACTAACA 58.260 39.130 15.93 0.00 0.00 2.41
1993 2036 5.697848 AACGCGAGATTATCAACACTAAC 57.302 39.130 15.93 0.00 0.00 2.34
1994 2037 6.558009 ACTAACGCGAGATTATCAACACTAA 58.442 36.000 15.93 0.00 0.00 2.24
1995 2038 6.127810 ACTAACGCGAGATTATCAACACTA 57.872 37.500 15.93 0.00 0.00 2.74
1996 2039 4.995124 ACTAACGCGAGATTATCAACACT 58.005 39.130 15.93 0.00 0.00 3.55
1997 2040 5.287752 TGAACTAACGCGAGATTATCAACAC 59.712 40.000 15.93 0.00 0.00 3.32
1998 2041 5.404096 TGAACTAACGCGAGATTATCAACA 58.596 37.500 15.93 0.00 0.00 3.33
1999 2042 5.944049 TGAACTAACGCGAGATTATCAAC 57.056 39.130 15.93 0.00 0.00 3.18
2000 2043 6.954616 TTTGAACTAACGCGAGATTATCAA 57.045 33.333 15.93 13.02 0.00 2.57
2001 2044 6.183360 GGTTTTGAACTAACGCGAGATTATCA 60.183 38.462 15.93 7.15 0.00 2.15
2002 2045 6.183324 GGTTTTGAACTAACGCGAGATTATC 58.817 40.000 15.93 4.29 0.00 1.75
2003 2046 5.220340 CGGTTTTGAACTAACGCGAGATTAT 60.220 40.000 15.93 0.00 0.00 1.28
2004 2047 4.090354 CGGTTTTGAACTAACGCGAGATTA 59.910 41.667 15.93 0.00 0.00 1.75
2005 2048 3.120786 CGGTTTTGAACTAACGCGAGATT 60.121 43.478 15.93 0.00 0.00 2.40
2006 2049 2.410730 CGGTTTTGAACTAACGCGAGAT 59.589 45.455 15.93 0.13 0.00 2.75
2007 2050 1.788308 CGGTTTTGAACTAACGCGAGA 59.212 47.619 15.93 0.00 0.00 4.04
2008 2051 1.136446 CCGGTTTTGAACTAACGCGAG 60.136 52.381 15.93 2.26 0.00 5.03
2009 2052 0.860533 CCGGTTTTGAACTAACGCGA 59.139 50.000 15.93 0.00 0.00 5.87
2010 2053 0.860533 TCCGGTTTTGAACTAACGCG 59.139 50.000 3.53 3.53 0.00 6.01
2011 2054 2.481185 TGATCCGGTTTTGAACTAACGC 59.519 45.455 0.00 0.00 0.00 4.84
2012 2055 4.735662 TTGATCCGGTTTTGAACTAACG 57.264 40.909 0.00 0.00 0.00 3.18
2013 2056 7.650104 TGAATTTTGATCCGGTTTTGAACTAAC 59.350 33.333 0.00 0.00 0.00 2.34
2014 2057 7.717568 TGAATTTTGATCCGGTTTTGAACTAA 58.282 30.769 0.00 0.00 0.00 2.24
2015 2058 7.278461 TGAATTTTGATCCGGTTTTGAACTA 57.722 32.000 0.00 0.00 0.00 2.24
2016 2059 6.155475 TGAATTTTGATCCGGTTTTGAACT 57.845 33.333 0.00 0.00 0.00 3.01
2017 2060 6.836577 TTGAATTTTGATCCGGTTTTGAAC 57.163 33.333 0.00 0.00 0.00 3.18
2018 2061 8.443953 AATTTGAATTTTGATCCGGTTTTGAA 57.556 26.923 0.00 0.00 0.00 2.69
2019 2062 7.712639 TGAATTTGAATTTTGATCCGGTTTTGA 59.287 29.630 0.00 0.00 0.00 2.69
2020 2063 7.859598 TGAATTTGAATTTTGATCCGGTTTTG 58.140 30.769 0.00 0.00 0.00 2.44
2021 2064 8.443953 TTGAATTTGAATTTTGATCCGGTTTT 57.556 26.923 0.00 0.00 0.00 2.43
2022 2065 8.443953 TTTGAATTTGAATTTTGATCCGGTTT 57.556 26.923 0.00 0.00 0.00 3.27
2023 2066 8.443953 TTTTGAATTTGAATTTTGATCCGGTT 57.556 26.923 0.00 0.00 0.00 4.44
2024 2067 8.620116 ATTTTGAATTTGAATTTTGATCCGGT 57.380 26.923 0.00 0.00 0.00 5.28
2035 2078 9.896263 GTTGTTTGCCATATTTTGAATTTGAAT 57.104 25.926 0.00 0.00 0.00 2.57
2036 2079 8.896744 TGTTGTTTGCCATATTTTGAATTTGAA 58.103 25.926 0.00 0.00 0.00 2.69
2037 2080 8.442632 TGTTGTTTGCCATATTTTGAATTTGA 57.557 26.923 0.00 0.00 0.00 2.69
2038 2081 9.512435 TTTGTTGTTTGCCATATTTTGAATTTG 57.488 25.926 0.00 0.00 0.00 2.32
2040 2083 9.733219 CTTTTGTTGTTTGCCATATTTTGAATT 57.267 25.926 0.00 0.00 0.00 2.17
2041 2084 8.901793 ACTTTTGTTGTTTGCCATATTTTGAAT 58.098 25.926 0.00 0.00 0.00 2.57
2042 2085 8.273780 ACTTTTGTTGTTTGCCATATTTTGAA 57.726 26.923 0.00 0.00 0.00 2.69
2043 2086 7.856145 ACTTTTGTTGTTTGCCATATTTTGA 57.144 28.000 0.00 0.00 0.00 2.69
2044 2087 8.908172 AAACTTTTGTTGTTTGCCATATTTTG 57.092 26.923 0.00 0.00 42.67 2.44
2045 2088 9.566530 GAAAACTTTTGTTGTTTGCCATATTTT 57.433 25.926 0.00 0.00 42.67 1.82
2046 2089 8.734386 TGAAAACTTTTGTTGTTTGCCATATTT 58.266 25.926 0.00 0.00 42.67 1.40
2047 2090 8.273780 TGAAAACTTTTGTTGTTTGCCATATT 57.726 26.923 0.00 0.00 42.67 1.28
2048 2091 7.856145 TGAAAACTTTTGTTGTTTGCCATAT 57.144 28.000 0.00 0.00 42.67 1.78
2049 2092 7.672983 TTGAAAACTTTTGTTGTTTGCCATA 57.327 28.000 0.00 0.00 42.67 2.74
2050 2093 6.566197 TTGAAAACTTTTGTTGTTTGCCAT 57.434 29.167 0.00 0.00 42.67 4.40
2051 2094 6.377327 TTTGAAAACTTTTGTTGTTTGCCA 57.623 29.167 0.00 0.00 42.67 4.92
2052 2095 7.685532 TTTTTGAAAACTTTTGTTGTTTGCC 57.314 28.000 0.00 0.00 42.67 4.52
2073 2116 9.688091 ACACCCCAACATTTTAGTTTTAATTTT 57.312 25.926 0.00 0.00 0.00 1.82
2074 2117 9.688091 AACACCCCAACATTTTAGTTTTAATTT 57.312 25.926 0.00 0.00 0.00 1.82
2075 2118 9.114952 CAACACCCCAACATTTTAGTTTTAATT 57.885 29.630 0.00 0.00 0.00 1.40
2076 2119 7.227711 GCAACACCCCAACATTTTAGTTTTAAT 59.772 33.333 0.00 0.00 0.00 1.40
2077 2120 6.539103 GCAACACCCCAACATTTTAGTTTTAA 59.461 34.615 0.00 0.00 0.00 1.52
2078 2121 6.049790 GCAACACCCCAACATTTTAGTTTTA 58.950 36.000 0.00 0.00 0.00 1.52
2079 2122 4.878971 GCAACACCCCAACATTTTAGTTTT 59.121 37.500 0.00 0.00 0.00 2.43
2080 2123 4.447290 GCAACACCCCAACATTTTAGTTT 58.553 39.130 0.00 0.00 0.00 2.66
2081 2124 3.181459 GGCAACACCCCAACATTTTAGTT 60.181 43.478 0.00 0.00 0.00 2.24
2082 2125 2.367241 GGCAACACCCCAACATTTTAGT 59.633 45.455 0.00 0.00 0.00 2.24
2083 2126 2.366916 TGGCAACACCCCAACATTTTAG 59.633 45.455 0.00 0.00 46.17 1.85
2084 2127 2.398588 TGGCAACACCCCAACATTTTA 58.601 42.857 0.00 0.00 46.17 1.52
2085 2128 1.207791 TGGCAACACCCCAACATTTT 58.792 45.000 0.00 0.00 46.17 1.82
2086 2129 2.922162 TGGCAACACCCCAACATTT 58.078 47.368 0.00 0.00 46.17 2.32
2087 2130 4.716025 TGGCAACACCCCAACATT 57.284 50.000 0.00 0.00 46.17 2.71
2098 2141 9.927668 ATAATTACCTATGCATTATTTGGCAAC 57.072 29.630 3.54 0.00 44.20 4.17
2100 2143 9.926158 CAATAATTACCTATGCATTATTTGGCA 57.074 29.630 3.54 0.00 45.23 4.92
2101 2144 9.927668 ACAATAATTACCTATGCATTATTTGGC 57.072 29.630 3.54 0.00 32.93 4.52
2108 2151 8.995027 TTCTCCACAATAATTACCTATGCATT 57.005 30.769 3.54 0.00 0.00 3.56
2109 2152 8.850156 GTTTCTCCACAATAATTACCTATGCAT 58.150 33.333 3.79 3.79 0.00 3.96
2110 2153 7.284489 GGTTTCTCCACAATAATTACCTATGCA 59.716 37.037 0.00 0.00 35.97 3.96
2111 2154 7.284489 TGGTTTCTCCACAATAATTACCTATGC 59.716 37.037 0.00 0.00 41.93 3.14
2112 2155 8.746052 TGGTTTCTCCACAATAATTACCTATG 57.254 34.615 0.00 0.00 41.93 2.23
2127 2170 7.507616 ACATTTTATAAAGGTGTGGTTTCTCCA 59.492 33.333 14.08 0.00 45.01 3.86
2128 2171 7.892609 ACATTTTATAAAGGTGTGGTTTCTCC 58.107 34.615 14.08 0.00 0.00 3.71
2129 2172 9.758651 AAACATTTTATAAAGGTGTGGTTTCTC 57.241 29.630 15.04 0.00 0.00 2.87
2248 2291 2.627699 ACCACTGCCACAATTAACTTGG 59.372 45.455 0.00 0.00 39.30 3.61
2249 2292 5.643379 ATACCACTGCCACAATTAACTTG 57.357 39.130 0.00 0.00 40.90 3.16
2250 2293 7.954666 ATTATACCACTGCCACAATTAACTT 57.045 32.000 0.00 0.00 0.00 2.66
2251 2294 7.954666 AATTATACCACTGCCACAATTAACT 57.045 32.000 0.00 0.00 0.00 2.24
2252 2295 8.899771 AGTAATTATACCACTGCCACAATTAAC 58.100 33.333 0.00 0.00 32.08 2.01
2255 2298 9.640952 AATAGTAATTATACCACTGCCACAATT 57.359 29.630 0.00 0.00 32.08 2.32
2257 2300 9.550406 GTAATAGTAATTATACCACTGCCACAA 57.450 33.333 0.00 0.00 32.08 3.33
2258 2301 8.930527 AGTAATAGTAATTATACCACTGCCACA 58.069 33.333 0.00 0.00 32.08 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.