Multiple sequence alignment - TraesCS6D01G348000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G348000 chr6D 100.000 5822 0 0 1 5822 446440581 446446402 0.000000e+00 10752.0
1 TraesCS6D01G348000 chr6D 85.034 294 25 15 1 287 283805 283524 1.240000e-71 281.0
2 TraesCS6D01G348000 chr6D 96.795 156 5 0 1820 1975 446442250 446442405 1.610000e-65 261.0
3 TraesCS6D01G348000 chr6D 96.795 156 5 0 1670 1825 446442400 446442555 1.610000e-65 261.0
4 TraesCS6D01G348000 chr6D 80.357 168 26 4 5643 5807 81929449 81929286 2.850000e-23 121.0
5 TraesCS6D01G348000 chr6B 95.532 4476 143 24 614 5050 674710094 674714551 0.000000e+00 7105.0
6 TraesCS6D01G348000 chr6B 87.050 556 41 15 5038 5575 674715694 674716236 3.000000e-167 599.0
7 TraesCS6D01G348000 chr6B 92.218 257 16 3 5114 5370 674714764 674715016 1.540000e-95 361.0
8 TraesCS6D01G348000 chr6B 83.333 396 33 12 1 378 674361591 674361971 9.350000e-88 335.0
9 TraesCS6D01G348000 chr6B 96.154 156 6 0 1670 1825 674711327 674711482 7.490000e-64 255.0
10 TraesCS6D01G348000 chr6B 95.513 156 7 0 1820 1975 674711177 674711332 3.480000e-62 250.0
11 TraesCS6D01G348000 chr6B 82.558 172 25 5 5643 5811 580371466 580371297 4.700000e-31 147.0
12 TraesCS6D01G348000 chr6B 84.667 150 17 6 5661 5807 290236166 290236020 1.690000e-30 145.0
13 TraesCS6D01G348000 chr6B 87.356 87 4 1 433 519 394693861 394693782 6.210000e-15 93.5
14 TraesCS6D01G348000 chr6A 96.272 3541 107 11 1820 5347 593007567 593011095 0.000000e+00 5784.0
15 TraesCS6D01G348000 chr6A 95.142 1338 54 8 4013 5347 593027304 593028633 0.000000e+00 2100.0
16 TraesCS6D01G348000 chr6A 90.503 1432 85 24 433 1825 593006303 593007722 0.000000e+00 1844.0
17 TraesCS6D01G348000 chr6A 85.714 273 20 11 5346 5602 593011353 593011622 2.670000e-68 270.0
18 TraesCS6D01G348000 chr6A 94.915 59 2 1 1217 1274 32534077 32534019 2.230000e-14 91.6
19 TraesCS6D01G348000 chr6A 85.057 87 6 1 433 519 228519786 228519865 1.340000e-11 82.4
20 TraesCS6D01G348000 chr6A 84.884 86 6 1 434 519 509284165 509284243 4.840000e-11 80.5
21 TraesCS6D01G348000 chr6A 97.619 42 1 0 5346 5387 593028891 593028932 8.090000e-09 73.1
22 TraesCS6D01G348000 chr7D 85.677 384 32 8 1 378 630718157 630718523 3.290000e-102 383.0
23 TraesCS6D01G348000 chr7D 84.298 121 13 4 5683 5802 422663499 422663614 4.770000e-21 113.0
24 TraesCS6D01G348000 chr7D 80.645 93 10 3 429 521 606556151 606556235 1.350000e-06 65.8
25 TraesCS6D01G348000 chr7A 83.981 412 29 14 4 396 49898648 49898255 1.540000e-95 361.0
26 TraesCS6D01G348000 chr7A 81.081 148 25 3 5667 5811 181185644 181185791 1.330000e-21 115.0
27 TraesCS6D01G348000 chr7B 84.655 391 24 16 7 378 589409985 589409612 2.000000e-94 357.0
28 TraesCS6D01G348000 chr7B 81.579 152 23 5 5661 5808 665364237 665364387 2.850000e-23 121.0
29 TraesCS6D01G348000 chr7B 90.909 55 4 1 1220 1274 559713110 559713057 8.090000e-09 73.1
30 TraesCS6D01G348000 chr7B 89.286 56 4 2 5758 5811 741929538 741929483 1.050000e-07 69.4
31 TraesCS6D01G348000 chr1B 82.415 381 44 13 1 378 656986282 656986642 1.580000e-80 311.0
32 TraesCS6D01G348000 chr1B 81.612 397 34 17 4 381 7227797 7228173 5.710000e-75 292.0
33 TraesCS6D01G348000 chr1B 81.977 172 23 6 5643 5811 183455047 183454881 7.870000e-29 139.0
34 TraesCS6D01G348000 chr2A 81.841 391 43 21 1 380 422110278 422110651 2.640000e-78 303.0
35 TraesCS6D01G348000 chr1D 81.818 385 43 21 2 383 27547219 27546859 1.230000e-76 298.0
36 TraesCS6D01G348000 chr1D 84.192 291 34 12 9 292 220876346 220876061 7.430000e-69 272.0
37 TraesCS6D01G348000 chr1D 95.238 42 2 0 892 933 412824243 412824202 3.770000e-07 67.6
38 TraesCS6D01G348000 chr1D 95.238 42 2 0 892 933 412907782 412907741 3.770000e-07 67.6
39 TraesCS6D01G348000 chr3D 85.866 283 31 8 1 280 598643361 598643637 5.710000e-75 292.0
40 TraesCS6D01G348000 chr3D 90.476 42 4 0 892 933 421023338 421023379 8.150000e-04 56.5
41 TraesCS6D01G348000 chr2D 84.014 294 39 8 1 290 502495975 502496264 5.750000e-70 276.0
42 TraesCS6D01G348000 chr2B 84.615 286 35 9 7 287 621483436 621483155 5.750000e-70 276.0
43 TraesCS6D01G348000 chr1A 87.059 170 12 7 210 378 554577562 554577402 3.580000e-42 183.0
44 TraesCS6D01G348000 chr1A 95.522 67 3 0 1208 1274 389228048 389228114 2.220000e-19 108.0
45 TraesCS6D01G348000 chr1A 100.000 28 0 0 5758 5785 455603244 455603217 1.100000e-02 52.8
46 TraesCS6D01G348000 chr5B 87.059 170 9 3 210 378 549967992 549967835 4.640000e-41 180.0
47 TraesCS6D01G348000 chr5B 84.571 175 9 6 210 378 80686630 80686468 2.170000e-34 158.0
48 TraesCS6D01G348000 chr5B 83.030 165 17 6 5643 5806 292759141 292759295 7.870000e-29 139.0
49 TraesCS6D01G348000 chr5B 81.061 132 19 6 5676 5803 684969767 684969638 3.710000e-17 100.0
50 TraesCS6D01G348000 chr3B 84.524 168 24 2 5643 5809 823396735 823396569 1.300000e-36 165.0
51 TraesCS6D01G348000 chr3B 83.673 147 16 5 5643 5786 188488677 188488536 1.320000e-26 132.0
52 TraesCS6D01G348000 chr4A 84.795 171 11 5 210 378 560966948 560967105 2.170000e-34 158.0
53 TraesCS6D01G348000 chr4A 94.382 89 4 1 296 383 740164943 740164855 1.020000e-27 135.0
54 TraesCS6D01G348000 chr4A 95.349 43 1 1 1217 1258 592072995 592072953 3.770000e-07 67.6
55 TraesCS6D01G348000 chr4B 81.065 169 21 8 5646 5808 670418498 670418661 2.200000e-24 124.0
56 TraesCS6D01G348000 chr5A 80.000 160 24 7 5657 5811 17248662 17248506 1.710000e-20 111.0
57 TraesCS6D01G348000 chr3A 92.857 42 3 0 892 933 180050649 180050608 1.750000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G348000 chr6D 446440581 446446402 5821 False 10752.000000 10752 100.000000 1 5822 1 chr6D.!!$F1 5821
1 TraesCS6D01G348000 chr6B 674710094 674716236 6142 False 1714.000000 7105 93.293400 614 5575 5 chr6B.!!$F2 4961
2 TraesCS6D01G348000 chr6A 593006303 593011622 5319 False 2632.666667 5784 90.829667 433 5602 3 chr6A.!!$F3 5169
3 TraesCS6D01G348000 chr6A 593027304 593028932 1628 False 1086.550000 2100 96.380500 4013 5387 2 chr6A.!!$F4 1374

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 328 0.037326 TCGAGTACAAGGCAAGCCAG 60.037 55.000 14.40 7.89 38.92 4.85 F
1271 1346 0.031010 AGGTAATCCCTTCTCCCGCT 60.031 55.000 0.00 0.00 42.73 5.52 F
1307 1387 0.037326 CTCGGTTAGTGGCAGCTCAA 60.037 55.000 0.00 0.00 0.00 3.02 F
1886 2117 0.675633 AACCCAAGCAGTGTCAATGC 59.324 50.000 17.27 17.27 44.18 3.56 F
2843 3079 0.802494 AAGCACCGCCAGATAAAACG 59.198 50.000 0.00 0.00 0.00 3.60 F
3807 4049 1.814429 ATACGATCCCAATCCACCCA 58.186 50.000 0.00 0.00 0.00 4.51 F
4584 4829 3.057245 GTGAGGCCACAAAGGAAAATCTC 60.057 47.826 3.76 0.00 42.72 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1846 2077 0.037232 GCAACTCGGCTAGTTCCACT 60.037 55.000 0.81 0.0 45.64 4.00 R
3039 3275 0.184692 TCCAGTGGGTTGCACATCAA 59.815 50.000 9.92 0.0 34.93 2.57 R
3179 3415 4.961585 ACCCTGGGTTTAGTCTAGAAGAT 58.038 43.478 14.05 0.0 27.29 2.40 R
3807 4049 3.058914 GTGCATTACGTTGAGTTTCTGCT 60.059 43.478 0.00 0.0 33.93 4.24 R
3982 4226 1.202417 ACCATTCCTGTACGAGCGATG 60.202 52.381 0.00 0.0 0.00 3.84 R
4638 4883 1.348696 TCTTTGCTCTGCTCCATCACA 59.651 47.619 0.00 0.0 0.00 3.58 R
5484 7157 2.667874 TTGCACGCCATTCGCTCA 60.668 55.556 0.00 0.0 43.23 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.026915 AAAACGCCGATCAAAACGAC 57.973 45.000 0.00 0.00 0.00 4.34
20 21 0.236449 AAACGCCGATCAAAACGACC 59.764 50.000 0.00 0.00 0.00 4.79
21 22 1.893168 AACGCCGATCAAAACGACCG 61.893 55.000 0.00 0.00 0.00 4.79
22 23 2.782615 GCCGATCAAAACGACCGG 59.217 61.111 0.00 0.00 42.74 5.28
23 24 2.782615 CCGATCAAAACGACCGGC 59.217 61.111 0.00 0.00 33.47 6.13
25 26 2.089936 CGATCAAAACGACCGGCGA 61.090 57.895 22.10 2.72 44.57 5.54
26 27 1.708027 GATCAAAACGACCGGCGAG 59.292 57.895 22.10 7.51 44.57 5.03
27 28 0.734942 GATCAAAACGACCGGCGAGA 60.735 55.000 22.10 14.33 44.57 4.04
28 29 0.736325 ATCAAAACGACCGGCGAGAG 60.736 55.000 22.10 0.45 44.57 3.20
29 30 1.372499 CAAAACGACCGGCGAGAGA 60.372 57.895 22.10 0.00 44.57 3.10
30 31 1.080705 AAAACGACCGGCGAGAGAG 60.081 57.895 22.10 0.00 44.57 3.20
31 32 2.488087 AAAACGACCGGCGAGAGAGG 62.488 60.000 22.10 0.00 44.57 3.69
34 35 2.754658 GACCGGCGAGAGAGGGAA 60.755 66.667 9.30 0.00 35.21 3.97
35 36 2.283676 ACCGGCGAGAGAGGGAAA 60.284 61.111 9.30 0.00 35.21 3.13
36 37 1.885163 GACCGGCGAGAGAGGGAAAA 61.885 60.000 9.30 0.00 35.21 2.29
37 38 1.295423 CCGGCGAGAGAGGGAAAAA 59.705 57.895 9.30 0.00 0.00 1.94
62 63 3.771978 GCAAGGGCTCGGGAAAAA 58.228 55.556 0.00 0.00 36.96 1.94
63 64 1.586541 GCAAGGGCTCGGGAAAAAG 59.413 57.895 0.00 0.00 36.96 2.27
64 65 0.893727 GCAAGGGCTCGGGAAAAAGA 60.894 55.000 0.00 0.00 36.96 2.52
65 66 0.881796 CAAGGGCTCGGGAAAAAGAC 59.118 55.000 0.00 0.00 0.00 3.01
66 67 0.771755 AAGGGCTCGGGAAAAAGACT 59.228 50.000 0.00 0.00 0.00 3.24
67 68 0.325272 AGGGCTCGGGAAAAAGACTC 59.675 55.000 0.00 0.00 0.00 3.36
68 69 0.325272 GGGCTCGGGAAAAAGACTCT 59.675 55.000 0.00 0.00 0.00 3.24
69 70 1.676314 GGGCTCGGGAAAAAGACTCTC 60.676 57.143 0.00 0.00 0.00 3.20
70 71 1.276705 GGCTCGGGAAAAAGACTCTCT 59.723 52.381 0.00 0.00 0.00 3.10
71 72 2.496470 GGCTCGGGAAAAAGACTCTCTA 59.504 50.000 0.00 0.00 0.00 2.43
72 73 3.429684 GGCTCGGGAAAAAGACTCTCTAG 60.430 52.174 0.00 0.00 0.00 2.43
73 74 3.429684 GCTCGGGAAAAAGACTCTCTAGG 60.430 52.174 0.00 0.00 0.00 3.02
74 75 3.097614 TCGGGAAAAAGACTCTCTAGGG 58.902 50.000 0.00 0.00 0.00 3.53
75 76 2.418884 CGGGAAAAAGACTCTCTAGGGC 60.419 54.545 0.00 0.00 0.00 5.19
76 77 2.572104 GGGAAAAAGACTCTCTAGGGCA 59.428 50.000 0.00 0.00 0.00 5.36
77 78 3.369997 GGGAAAAAGACTCTCTAGGGCAG 60.370 52.174 0.00 0.00 0.00 4.85
78 79 3.266636 GAAAAAGACTCTCTAGGGCAGC 58.733 50.000 0.00 0.00 0.00 5.25
79 80 1.199615 AAAGACTCTCTAGGGCAGCC 58.800 55.000 1.26 1.26 0.00 4.85
80 81 1.040339 AAGACTCTCTAGGGCAGCCG 61.040 60.000 5.00 0.00 0.00 5.52
81 82 2.443016 ACTCTCTAGGGCAGCCGG 60.443 66.667 5.00 0.00 0.00 6.13
82 83 3.922640 CTCTCTAGGGCAGCCGGC 61.923 72.222 21.89 21.89 43.74 6.13
107 108 4.424711 ACCGGCGGACGTACCCTA 62.425 66.667 35.78 0.00 42.24 3.53
108 109 3.589881 CCGGCGGACGTACCCTAG 61.590 72.222 24.41 0.00 42.24 3.02
109 110 3.589881 CGGCGGACGTACCCTAGG 61.590 72.222 0.06 0.06 37.93 3.02
110 111 2.440980 GGCGGACGTACCCTAGGT 60.441 66.667 8.29 0.00 40.16 3.08
111 112 1.152963 GGCGGACGTACCCTAGGTA 60.153 63.158 8.29 0.00 37.09 3.08
118 119 2.195683 TACCCTAGGTACGGGCGG 59.804 66.667 8.29 0.00 46.04 6.13
152 153 2.436646 GGTCATGGTGGCCGACTG 60.437 66.667 0.00 0.00 29.54 3.51
153 154 3.127533 GTCATGGTGGCCGACTGC 61.128 66.667 0.00 0.00 40.16 4.40
186 187 3.810896 GGCGGCGGCTAAGGTTTG 61.811 66.667 27.22 0.00 39.81 2.93
187 188 3.810896 GCGGCGGCTAAGGTTTGG 61.811 66.667 9.78 0.00 35.83 3.28
188 189 2.046700 CGGCGGCTAAGGTTTGGA 60.047 61.111 7.61 0.00 0.00 3.53
189 190 1.451387 CGGCGGCTAAGGTTTGGAT 60.451 57.895 7.61 0.00 0.00 3.41
190 191 1.436983 CGGCGGCTAAGGTTTGGATC 61.437 60.000 7.61 0.00 0.00 3.36
191 192 1.436983 GGCGGCTAAGGTTTGGATCG 61.437 60.000 0.00 0.00 0.00 3.69
192 193 0.743345 GCGGCTAAGGTTTGGATCGT 60.743 55.000 0.00 0.00 0.00 3.73
193 194 1.006832 CGGCTAAGGTTTGGATCGTG 58.993 55.000 0.00 0.00 0.00 4.35
194 195 1.404986 CGGCTAAGGTTTGGATCGTGA 60.405 52.381 0.00 0.00 0.00 4.35
195 196 2.741878 CGGCTAAGGTTTGGATCGTGAT 60.742 50.000 0.00 0.00 0.00 3.06
196 197 3.279434 GGCTAAGGTTTGGATCGTGATT 58.721 45.455 0.00 0.00 0.00 2.57
197 198 4.448210 GGCTAAGGTTTGGATCGTGATTA 58.552 43.478 0.00 0.00 0.00 1.75
198 199 4.511826 GGCTAAGGTTTGGATCGTGATTAG 59.488 45.833 0.00 0.00 0.00 1.73
199 200 4.511826 GCTAAGGTTTGGATCGTGATTAGG 59.488 45.833 0.00 0.00 0.00 2.69
200 201 2.919228 AGGTTTGGATCGTGATTAGGC 58.081 47.619 0.00 0.00 0.00 3.93
201 202 2.505819 AGGTTTGGATCGTGATTAGGCT 59.494 45.455 0.00 0.00 0.00 4.58
202 203 2.614057 GGTTTGGATCGTGATTAGGCTG 59.386 50.000 0.00 0.00 0.00 4.85
203 204 3.531538 GTTTGGATCGTGATTAGGCTGA 58.468 45.455 0.00 0.00 0.00 4.26
204 205 4.130118 GTTTGGATCGTGATTAGGCTGAT 58.870 43.478 0.00 0.00 0.00 2.90
205 206 5.297547 GTTTGGATCGTGATTAGGCTGATA 58.702 41.667 0.00 0.00 0.00 2.15
206 207 4.521130 TGGATCGTGATTAGGCTGATAC 57.479 45.455 0.00 0.00 0.00 2.24
207 208 3.258372 TGGATCGTGATTAGGCTGATACC 59.742 47.826 0.00 0.00 0.00 2.73
208 209 3.258372 GGATCGTGATTAGGCTGATACCA 59.742 47.826 0.00 0.00 0.00 3.25
209 210 4.081420 GGATCGTGATTAGGCTGATACCAT 60.081 45.833 0.00 0.00 0.00 3.55
210 211 4.257267 TCGTGATTAGGCTGATACCATG 57.743 45.455 0.00 0.00 0.00 3.66
211 212 3.641436 TCGTGATTAGGCTGATACCATGT 59.359 43.478 0.00 0.00 0.00 3.21
212 213 4.100963 TCGTGATTAGGCTGATACCATGTT 59.899 41.667 0.00 0.00 0.00 2.71
213 214 5.303333 TCGTGATTAGGCTGATACCATGTTA 59.697 40.000 0.00 0.00 0.00 2.41
214 215 5.989168 CGTGATTAGGCTGATACCATGTTAA 59.011 40.000 0.00 0.00 0.00 2.01
215 216 6.481976 CGTGATTAGGCTGATACCATGTTAAA 59.518 38.462 0.00 0.00 0.00 1.52
216 217 7.011950 CGTGATTAGGCTGATACCATGTTAAAA 59.988 37.037 0.00 0.00 0.00 1.52
217 218 8.345565 GTGATTAGGCTGATACCATGTTAAAAG 58.654 37.037 0.00 0.00 0.00 2.27
218 219 7.502226 TGATTAGGCTGATACCATGTTAAAAGG 59.498 37.037 0.00 0.00 0.00 3.11
219 220 4.536765 AGGCTGATACCATGTTAAAAGGG 58.463 43.478 0.00 0.00 0.00 3.95
220 221 4.229582 AGGCTGATACCATGTTAAAAGGGA 59.770 41.667 2.64 0.00 0.00 4.20
221 222 4.580580 GGCTGATACCATGTTAAAAGGGAG 59.419 45.833 2.64 0.00 0.00 4.30
222 223 5.437060 GCTGATACCATGTTAAAAGGGAGA 58.563 41.667 2.64 0.00 0.00 3.71
223 224 5.529060 GCTGATACCATGTTAAAAGGGAGAG 59.471 44.000 2.64 0.00 0.00 3.20
224 225 6.632672 GCTGATACCATGTTAAAAGGGAGAGA 60.633 42.308 2.64 0.00 0.00 3.10
225 226 6.889198 TGATACCATGTTAAAAGGGAGAGAG 58.111 40.000 2.64 0.00 0.00 3.20
226 227 6.672218 TGATACCATGTTAAAAGGGAGAGAGA 59.328 38.462 2.64 0.00 0.00 3.10
227 228 5.428184 ACCATGTTAAAAGGGAGAGAGAG 57.572 43.478 2.64 0.00 0.00 3.20
228 229 4.226168 ACCATGTTAAAAGGGAGAGAGAGG 59.774 45.833 2.64 0.00 0.00 3.69
229 230 4.471386 CCATGTTAAAAGGGAGAGAGAGGA 59.529 45.833 0.00 0.00 0.00 3.71
230 231 5.131809 CCATGTTAAAAGGGAGAGAGAGGAT 59.868 44.000 0.00 0.00 0.00 3.24
231 232 6.353429 CCATGTTAAAAGGGAGAGAGAGGATT 60.353 42.308 0.00 0.00 0.00 3.01
232 233 6.054860 TGTTAAAAGGGAGAGAGAGGATTG 57.945 41.667 0.00 0.00 0.00 2.67
233 234 5.045578 TGTTAAAAGGGAGAGAGAGGATTGG 60.046 44.000 0.00 0.00 0.00 3.16
234 235 2.959421 AAGGGAGAGAGAGGATTGGT 57.041 50.000 0.00 0.00 0.00 3.67
235 236 4.354208 AAAGGGAGAGAGAGGATTGGTA 57.646 45.455 0.00 0.00 0.00 3.25
236 237 3.611025 AGGGAGAGAGAGGATTGGTAG 57.389 52.381 0.00 0.00 0.00 3.18
237 238 3.135279 AGGGAGAGAGAGGATTGGTAGA 58.865 50.000 0.00 0.00 0.00 2.59
238 239 3.533907 AGGGAGAGAGAGGATTGGTAGAA 59.466 47.826 0.00 0.00 0.00 2.10
239 240 4.171841 AGGGAGAGAGAGGATTGGTAGAAT 59.828 45.833 0.00 0.00 0.00 2.40
240 241 5.377164 AGGGAGAGAGAGGATTGGTAGAATA 59.623 44.000 0.00 0.00 0.00 1.75
241 242 5.714806 GGGAGAGAGAGGATTGGTAGAATAG 59.285 48.000 0.00 0.00 0.00 1.73
242 243 6.311735 GGAGAGAGAGGATTGGTAGAATAGT 58.688 44.000 0.00 0.00 0.00 2.12
243 244 6.780522 GGAGAGAGAGGATTGGTAGAATAGTT 59.219 42.308 0.00 0.00 0.00 2.24
244 245 7.039993 GGAGAGAGAGGATTGGTAGAATAGTTC 60.040 44.444 0.00 0.00 0.00 3.01
245 246 6.488683 AGAGAGAGGATTGGTAGAATAGTTCG 59.511 42.308 0.00 0.00 34.02 3.95
246 247 6.130569 AGAGAGGATTGGTAGAATAGTTCGT 58.869 40.000 0.00 0.00 34.02 3.85
247 248 6.608002 AGAGAGGATTGGTAGAATAGTTCGTT 59.392 38.462 0.00 0.00 34.02 3.85
248 249 6.574350 AGAGGATTGGTAGAATAGTTCGTTG 58.426 40.000 0.00 0.00 34.02 4.10
249 250 6.154706 AGAGGATTGGTAGAATAGTTCGTTGT 59.845 38.462 0.00 0.00 34.02 3.32
250 251 7.341256 AGAGGATTGGTAGAATAGTTCGTTGTA 59.659 37.037 0.00 0.00 34.02 2.41
251 252 8.019656 AGGATTGGTAGAATAGTTCGTTGTAT 57.980 34.615 0.00 0.00 34.02 2.29
252 253 8.483758 AGGATTGGTAGAATAGTTCGTTGTATT 58.516 33.333 0.00 0.00 34.02 1.89
253 254 8.548721 GGATTGGTAGAATAGTTCGTTGTATTG 58.451 37.037 0.00 0.00 34.02 1.90
254 255 6.897259 TGGTAGAATAGTTCGTTGTATTGC 57.103 37.500 0.00 0.00 34.02 3.56
255 256 5.813672 TGGTAGAATAGTTCGTTGTATTGCC 59.186 40.000 0.00 0.00 34.02 4.52
256 257 6.047231 GGTAGAATAGTTCGTTGTATTGCCT 58.953 40.000 0.00 0.00 34.02 4.75
257 258 6.018994 GGTAGAATAGTTCGTTGTATTGCCTG 60.019 42.308 0.00 0.00 34.02 4.85
258 259 5.730550 AGAATAGTTCGTTGTATTGCCTGA 58.269 37.500 0.00 0.00 34.02 3.86
259 260 5.812642 AGAATAGTTCGTTGTATTGCCTGAG 59.187 40.000 0.00 0.00 34.02 3.35
260 261 2.076863 AGTTCGTTGTATTGCCTGAGC 58.923 47.619 0.00 0.00 40.48 4.26
261 262 1.130561 GTTCGTTGTATTGCCTGAGCC 59.869 52.381 0.00 0.00 38.69 4.70
262 263 0.613260 TCGTTGTATTGCCTGAGCCT 59.387 50.000 0.00 0.00 38.69 4.58
263 264 1.009829 CGTTGTATTGCCTGAGCCTC 58.990 55.000 0.00 0.00 38.69 4.70
264 265 1.675714 CGTTGTATTGCCTGAGCCTCA 60.676 52.381 0.00 0.00 38.69 3.86
265 266 2.648059 GTTGTATTGCCTGAGCCTCAT 58.352 47.619 0.00 0.00 38.69 2.90
266 267 3.741075 CGTTGTATTGCCTGAGCCTCATA 60.741 47.826 0.00 0.00 38.69 2.15
267 268 4.199310 GTTGTATTGCCTGAGCCTCATAA 58.801 43.478 0.00 0.00 38.69 1.90
268 269 4.077300 TGTATTGCCTGAGCCTCATAAG 57.923 45.455 0.00 0.00 38.69 1.73
269 270 1.978454 ATTGCCTGAGCCTCATAAGC 58.022 50.000 0.00 0.00 38.69 3.09
270 271 0.620030 TTGCCTGAGCCTCATAAGCA 59.380 50.000 9.40 9.40 38.69 3.91
271 272 0.841961 TGCCTGAGCCTCATAAGCAT 59.158 50.000 9.40 0.00 38.69 3.79
272 273 2.049372 TGCCTGAGCCTCATAAGCATA 58.951 47.619 9.40 0.00 38.69 3.14
273 274 2.641321 TGCCTGAGCCTCATAAGCATAT 59.359 45.455 9.40 0.00 38.69 1.78
274 275 3.840078 TGCCTGAGCCTCATAAGCATATA 59.160 43.478 9.40 0.00 38.69 0.86
275 276 4.472470 TGCCTGAGCCTCATAAGCATATAT 59.528 41.667 9.40 0.00 38.69 0.86
276 277 5.662657 TGCCTGAGCCTCATAAGCATATATA 59.337 40.000 9.40 0.00 38.69 0.86
277 278 6.328410 TGCCTGAGCCTCATAAGCATATATAT 59.672 38.462 9.40 0.00 38.69 0.86
278 279 7.510343 TGCCTGAGCCTCATAAGCATATATATA 59.490 37.037 9.40 0.00 38.69 0.86
279 280 8.034215 GCCTGAGCCTCATAAGCATATATATAG 58.966 40.741 0.00 0.00 0.00 1.31
280 281 9.306777 CCTGAGCCTCATAAGCATATATATAGA 57.693 37.037 0.00 0.00 0.00 1.98
310 311 8.726068 ACATGATCTACTACATGATCTACTTCG 58.274 37.037 12.90 0.00 44.28 3.79
311 312 8.940952 CATGATCTACTACATGATCTACTTCGA 58.059 37.037 0.00 0.00 44.28 3.71
312 313 8.541133 TGATCTACTACATGATCTACTTCGAG 57.459 38.462 0.00 0.00 39.63 4.04
313 314 8.151596 TGATCTACTACATGATCTACTTCGAGT 58.848 37.037 0.00 0.00 39.63 4.18
314 315 9.642327 GATCTACTACATGATCTACTTCGAGTA 57.358 37.037 0.00 0.00 36.92 2.59
315 316 8.815141 TCTACTACATGATCTACTTCGAGTAC 57.185 38.462 0.00 0.00 0.00 2.73
316 317 8.419442 TCTACTACATGATCTACTTCGAGTACA 58.581 37.037 0.00 0.00 0.00 2.90
317 318 7.860918 ACTACATGATCTACTTCGAGTACAA 57.139 36.000 0.00 0.00 0.00 2.41
318 319 7.921787 ACTACATGATCTACTTCGAGTACAAG 58.078 38.462 0.00 0.00 0.00 3.16
319 320 6.137794 ACATGATCTACTTCGAGTACAAGG 57.862 41.667 0.00 0.00 0.00 3.61
320 321 4.634184 TGATCTACTTCGAGTACAAGGC 57.366 45.455 0.00 0.00 0.00 4.35
321 322 4.014406 TGATCTACTTCGAGTACAAGGCA 58.986 43.478 0.00 0.00 0.00 4.75
322 323 4.461431 TGATCTACTTCGAGTACAAGGCAA 59.539 41.667 0.00 0.00 0.00 4.52
323 324 4.436242 TCTACTTCGAGTACAAGGCAAG 57.564 45.455 0.00 0.00 0.00 4.01
324 325 1.797025 ACTTCGAGTACAAGGCAAGC 58.203 50.000 0.00 0.00 0.00 4.01
325 326 1.079503 CTTCGAGTACAAGGCAAGCC 58.920 55.000 2.02 2.02 0.00 4.35
326 327 0.394938 TTCGAGTACAAGGCAAGCCA 59.605 50.000 14.40 0.00 38.92 4.75
327 328 0.037326 TCGAGTACAAGGCAAGCCAG 60.037 55.000 14.40 7.89 38.92 4.85
328 329 0.037326 CGAGTACAAGGCAAGCCAGA 60.037 55.000 14.40 0.00 38.92 3.86
329 330 1.608025 CGAGTACAAGGCAAGCCAGAA 60.608 52.381 14.40 0.00 38.92 3.02
330 331 2.716217 GAGTACAAGGCAAGCCAGAAT 58.284 47.619 14.40 0.00 38.92 2.40
331 332 3.678806 CGAGTACAAGGCAAGCCAGAATA 60.679 47.826 14.40 0.00 38.92 1.75
332 333 4.455606 GAGTACAAGGCAAGCCAGAATAT 58.544 43.478 14.40 0.00 38.92 1.28
333 334 4.860022 AGTACAAGGCAAGCCAGAATATT 58.140 39.130 14.40 0.00 38.92 1.28
334 335 4.884164 AGTACAAGGCAAGCCAGAATATTC 59.116 41.667 14.40 7.41 38.92 1.75
335 336 3.026694 ACAAGGCAAGCCAGAATATTCC 58.973 45.455 14.40 0.00 38.92 3.01
336 337 3.294214 CAAGGCAAGCCAGAATATTCCT 58.706 45.455 14.40 0.00 38.92 3.36
337 338 4.079787 ACAAGGCAAGCCAGAATATTCCTA 60.080 41.667 14.40 0.00 38.92 2.94
338 339 4.363991 AGGCAAGCCAGAATATTCCTAG 57.636 45.455 14.40 2.56 38.92 3.02
339 340 3.718956 AGGCAAGCCAGAATATTCCTAGT 59.281 43.478 14.40 0.00 38.92 2.57
340 341 4.068599 GGCAAGCCAGAATATTCCTAGTC 58.931 47.826 11.92 0.00 35.81 2.59
341 342 4.202409 GGCAAGCCAGAATATTCCTAGTCT 60.202 45.833 11.92 0.47 32.67 3.24
342 343 5.012148 GGCAAGCCAGAATATTCCTAGTCTA 59.988 44.000 11.92 0.00 30.78 2.59
343 344 6.464465 GGCAAGCCAGAATATTCCTAGTCTAA 60.464 42.308 11.92 0.00 30.78 2.10
344 345 7.164803 GCAAGCCAGAATATTCCTAGTCTAAT 58.835 38.462 11.92 0.00 30.78 1.73
345 346 7.333174 GCAAGCCAGAATATTCCTAGTCTAATC 59.667 40.741 11.92 0.00 30.78 1.75
346 347 8.592809 CAAGCCAGAATATTCCTAGTCTAATCT 58.407 37.037 11.92 0.00 30.78 2.40
347 348 9.830186 AAGCCAGAATATTCCTAGTCTAATCTA 57.170 33.333 11.92 0.00 30.78 1.98
374 375 9.478768 TGTTTTCTAATACAATCACGTTACTCA 57.521 29.630 0.00 0.00 0.00 3.41
377 378 9.478768 TTTCTAATACAATCACGTTACTCAACA 57.521 29.630 0.00 0.00 34.05 3.33
378 379 8.683550 TCTAATACAATCACGTTACTCAACAG 57.316 34.615 0.00 0.00 34.05 3.16
379 380 8.301720 TCTAATACAATCACGTTACTCAACAGT 58.698 33.333 0.00 0.00 34.05 3.55
380 381 7.724305 AATACAATCACGTTACTCAACAGTT 57.276 32.000 0.00 0.00 34.05 3.16
381 382 7.724305 ATACAATCACGTTACTCAACAGTTT 57.276 32.000 0.00 0.00 34.05 2.66
382 383 6.431198 ACAATCACGTTACTCAACAGTTTT 57.569 33.333 0.00 0.00 34.05 2.43
383 384 6.483687 ACAATCACGTTACTCAACAGTTTTC 58.516 36.000 0.00 0.00 34.05 2.29
384 385 6.315393 ACAATCACGTTACTCAACAGTTTTCT 59.685 34.615 0.00 0.00 34.05 2.52
385 386 7.493320 ACAATCACGTTACTCAACAGTTTTCTA 59.507 33.333 0.00 0.00 34.05 2.10
386 387 6.817270 TCACGTTACTCAACAGTTTTCTAC 57.183 37.500 0.00 0.00 34.05 2.59
387 388 6.567050 TCACGTTACTCAACAGTTTTCTACT 58.433 36.000 0.00 0.00 37.68 2.57
388 389 7.706159 TCACGTTACTCAACAGTTTTCTACTA 58.294 34.615 0.00 0.00 34.56 1.82
389 390 7.859377 TCACGTTACTCAACAGTTTTCTACTAG 59.141 37.037 0.00 0.00 34.56 2.57
390 391 7.646922 CACGTTACTCAACAGTTTTCTACTAGT 59.353 37.037 0.00 0.00 34.56 2.57
391 392 8.193438 ACGTTACTCAACAGTTTTCTACTAGTT 58.807 33.333 0.00 0.00 34.56 2.24
392 393 9.028185 CGTTACTCAACAGTTTTCTACTAGTTT 57.972 33.333 0.00 0.00 34.56 2.66
394 395 9.880157 TTACTCAACAGTTTTCTACTAGTTTGT 57.120 29.630 0.00 0.00 34.56 2.83
395 396 8.197988 ACTCAACAGTTTTCTACTAGTTTGTG 57.802 34.615 0.00 0.00 34.56 3.33
396 397 8.038944 ACTCAACAGTTTTCTACTAGTTTGTGA 58.961 33.333 0.00 0.00 34.56 3.58
397 398 8.780846 TCAACAGTTTTCTACTAGTTTGTGAA 57.219 30.769 0.00 0.00 34.56 3.18
398 399 9.221933 TCAACAGTTTTCTACTAGTTTGTGAAA 57.778 29.630 0.00 4.99 34.56 2.69
399 400 9.490663 CAACAGTTTTCTACTAGTTTGTGAAAG 57.509 33.333 0.00 0.00 34.56 2.62
400 401 8.209917 ACAGTTTTCTACTAGTTTGTGAAAGG 57.790 34.615 0.00 4.62 34.56 3.11
401 402 7.132863 CAGTTTTCTACTAGTTTGTGAAAGGC 58.867 38.462 0.00 5.24 34.56 4.35
402 403 6.262496 AGTTTTCTACTAGTTTGTGAAAGGCC 59.738 38.462 0.00 0.00 34.56 5.19
403 404 5.562298 TTCTACTAGTTTGTGAAAGGCCT 57.438 39.130 0.00 0.00 0.00 5.19
404 405 6.675413 TTCTACTAGTTTGTGAAAGGCCTA 57.325 37.500 5.16 0.00 0.00 3.93
405 406 6.282199 TCTACTAGTTTGTGAAAGGCCTAG 57.718 41.667 5.16 0.00 0.00 3.02
406 407 6.014647 TCTACTAGTTTGTGAAAGGCCTAGA 58.985 40.000 5.16 0.00 0.00 2.43
407 408 5.562298 ACTAGTTTGTGAAAGGCCTAGAA 57.438 39.130 5.16 0.00 0.00 2.10
408 409 5.937111 ACTAGTTTGTGAAAGGCCTAGAAA 58.063 37.500 5.16 0.00 0.00 2.52
409 410 5.998363 ACTAGTTTGTGAAAGGCCTAGAAAG 59.002 40.000 5.16 0.00 0.00 2.62
410 411 5.048846 AGTTTGTGAAAGGCCTAGAAAGA 57.951 39.130 5.16 0.00 0.00 2.52
411 412 5.445964 AGTTTGTGAAAGGCCTAGAAAGAA 58.554 37.500 5.16 0.00 0.00 2.52
412 413 5.891551 AGTTTGTGAAAGGCCTAGAAAGAAA 59.108 36.000 5.16 0.49 0.00 2.52
413 414 6.039829 AGTTTGTGAAAGGCCTAGAAAGAAAG 59.960 38.462 5.16 0.00 0.00 2.62
414 415 4.398319 TGTGAAAGGCCTAGAAAGAAAGG 58.602 43.478 5.16 0.00 35.86 3.11
415 416 4.104102 TGTGAAAGGCCTAGAAAGAAAGGA 59.896 41.667 5.16 0.00 34.58 3.36
416 417 5.070685 GTGAAAGGCCTAGAAAGAAAGGAA 58.929 41.667 5.16 0.00 34.58 3.36
417 418 5.048643 GTGAAAGGCCTAGAAAGAAAGGAAC 60.049 44.000 5.16 0.00 34.58 3.62
419 420 4.293662 AGGCCTAGAAAGAAAGGAACTG 57.706 45.455 1.29 0.00 40.86 3.16
420 421 2.750166 GGCCTAGAAAGAAAGGAACTGC 59.250 50.000 0.00 0.00 40.86 4.40
421 422 2.750166 GCCTAGAAAGAAAGGAACTGCC 59.250 50.000 0.00 0.00 40.86 4.85
422 423 3.003480 CCTAGAAAGAAAGGAACTGCCG 58.997 50.000 0.00 0.00 40.86 5.69
423 424 1.897560 AGAAAGAAAGGAACTGCCGG 58.102 50.000 0.00 0.00 40.86 6.13
424 425 1.420138 AGAAAGAAAGGAACTGCCGGA 59.580 47.619 5.05 0.00 40.86 5.14
425 426 2.040412 AGAAAGAAAGGAACTGCCGGAT 59.960 45.455 5.05 0.00 40.86 4.18
426 427 2.115343 AAGAAAGGAACTGCCGGATC 57.885 50.000 5.05 0.00 40.86 3.36
427 428 1.280457 AGAAAGGAACTGCCGGATCT 58.720 50.000 5.05 0.00 40.86 2.75
428 429 1.630878 AGAAAGGAACTGCCGGATCTT 59.369 47.619 5.05 0.00 40.86 2.40
429 430 2.010497 GAAAGGAACTGCCGGATCTTC 58.990 52.381 5.05 0.65 40.86 2.87
430 431 0.984230 AAGGAACTGCCGGATCTTCA 59.016 50.000 5.05 0.00 40.86 3.02
431 432 1.207791 AGGAACTGCCGGATCTTCAT 58.792 50.000 5.05 0.00 43.43 2.57
440 441 2.149578 CCGGATCTTCATCATCCTTGC 58.850 52.381 0.00 0.00 38.18 4.01
448 449 4.100035 TCTTCATCATCCTTGCGTCACTAT 59.900 41.667 0.00 0.00 0.00 2.12
453 454 7.666623 TCATCATCCTTGCGTCACTATAATTA 58.333 34.615 0.00 0.00 0.00 1.40
464 465 7.439955 TGCGTCACTATAATTACCATCGAAAAT 59.560 33.333 0.00 0.00 0.00 1.82
477 478 4.689812 CCATCGAAAATGTTCAATTTGCCA 59.310 37.500 0.00 0.00 32.89 4.92
480 481 4.689812 TCGAAAATGTTCAATTTGCCATGG 59.310 37.500 7.63 7.63 32.89 3.66
481 482 4.142859 CGAAAATGTTCAATTTGCCATGGG 60.143 41.667 15.13 0.00 32.89 4.00
482 483 4.379708 GAAAATGTTCAATTTGCCATGGGC 60.380 41.667 15.13 6.55 40.40 5.36
483 484 6.549449 GAAAATGTTCAATTTGCCATGGGCT 61.549 40.000 15.13 0.00 40.52 5.19
484 485 8.270126 GAAAATGTTCAATTTGCCATGGGCTC 62.270 42.308 15.13 0.00 40.52 4.70
521 522 5.421056 TGACGTCAGGTACTTATCATTTCCT 59.579 40.000 15.76 0.00 34.60 3.36
606 645 7.907841 AAAGTTTTCTTTAGGGAAGGCTAAA 57.092 32.000 0.00 0.00 46.76 1.85
607 646 7.907841 AAGTTTTCTTTAGGGAAGGCTAAAA 57.092 32.000 0.00 0.00 36.67 1.52
608 647 7.907841 AGTTTTCTTTAGGGAAGGCTAAAAA 57.092 32.000 0.00 0.00 35.98 1.94
609 648 7.952671 AGTTTTCTTTAGGGAAGGCTAAAAAG 58.047 34.615 0.00 0.00 35.98 2.27
610 649 7.783119 AGTTTTCTTTAGGGAAGGCTAAAAAGA 59.217 33.333 0.00 0.00 35.98 2.52
611 650 8.418662 GTTTTCTTTAGGGAAGGCTAAAAAGAA 58.581 33.333 13.65 13.65 39.73 2.52
612 651 8.541899 TTTCTTTAGGGAAGGCTAAAAAGAAA 57.458 30.769 19.78 19.78 44.39 2.52
703 752 0.339859 TCAGTCTAGCCCATCCCAGT 59.660 55.000 0.00 0.00 0.00 4.00
711 760 2.001803 CCCATCCCAGTCCATGTGT 58.998 57.895 0.00 0.00 0.00 3.72
828 884 2.044252 TCTCTTCTCCCCCGTCCG 60.044 66.667 0.00 0.00 0.00 4.79
1070 1133 1.269998 CCCTAGCGATTTCTACCTCCG 59.730 57.143 0.00 0.00 0.00 4.63
1072 1135 1.955080 CTAGCGATTTCTACCTCCGGT 59.045 52.381 0.00 0.00 40.16 5.28
1258 1333 0.175073 GCCGACGTCCTCAAGGTAAT 59.825 55.000 10.58 0.00 36.34 1.89
1271 1346 0.031010 AGGTAATCCCTTCTCCCGCT 60.031 55.000 0.00 0.00 42.73 5.52
1274 1349 1.113517 TAATCCCTTCTCCCGCTCGG 61.114 60.000 0.48 0.48 0.00 4.63
1300 1380 2.820037 GCAGGCTCGGTTAGTGGC 60.820 66.667 0.00 0.00 38.93 5.01
1307 1387 0.037326 CTCGGTTAGTGGCAGCTCAA 60.037 55.000 0.00 0.00 0.00 3.02
1329 1409 1.153329 TGCAGTTCGTTGGTTCCGT 60.153 52.632 0.00 0.00 0.00 4.69
1398 1478 1.239968 CCAAGTTGGCTCAGCTGGTC 61.240 60.000 15.13 6.87 0.00 4.02
1417 1497 1.001068 TCGCCCAGAAAACGTATGTCA 59.999 47.619 0.00 0.00 0.00 3.58
1461 1541 2.443255 TCATTCCTATGAGAAAGGGGCC 59.557 50.000 0.00 0.00 35.87 5.80
1644 1725 3.041940 CCGCGGTTCGTCTGCTTT 61.042 61.111 19.50 0.00 45.50 3.51
1746 1977 5.801350 GCAGTGTCAATGCTTACATCTTA 57.199 39.130 17.67 0.00 40.59 2.10
1747 1978 5.804173 GCAGTGTCAATGCTTACATCTTAG 58.196 41.667 17.67 0.00 40.59 2.18
1748 1979 5.352569 GCAGTGTCAATGCTTACATCTTAGT 59.647 40.000 17.67 0.00 40.59 2.24
1749 1980 6.128172 GCAGTGTCAATGCTTACATCTTAGTT 60.128 38.462 17.67 0.00 40.59 2.24
1750 1981 7.064609 GCAGTGTCAATGCTTACATCTTAGTTA 59.935 37.037 17.67 0.00 40.59 2.24
1751 1982 9.102757 CAGTGTCAATGCTTACATCTTAGTTAT 57.897 33.333 0.00 0.00 34.62 1.89
1754 1985 9.542462 TGTCAATGCTTACATCTTAGTTATACC 57.458 33.333 0.00 0.00 34.62 2.73
1755 1986 9.765795 GTCAATGCTTACATCTTAGTTATACCT 57.234 33.333 0.00 0.00 34.62 3.08
1756 1987 9.764363 TCAATGCTTACATCTTAGTTATACCTG 57.236 33.333 0.00 0.00 34.62 4.00
1757 1988 9.547753 CAATGCTTACATCTTAGTTATACCTGT 57.452 33.333 0.00 0.00 34.62 4.00
1758 1989 9.547753 AATGCTTACATCTTAGTTATACCTGTG 57.452 33.333 0.00 0.00 34.62 3.66
1759 1990 8.301252 TGCTTACATCTTAGTTATACCTGTGA 57.699 34.615 0.00 0.00 0.00 3.58
1760 1991 8.414003 TGCTTACATCTTAGTTATACCTGTGAG 58.586 37.037 0.00 0.00 0.00 3.51
1761 1992 7.382759 GCTTACATCTTAGTTATACCTGTGAGC 59.617 40.741 0.00 0.00 37.51 4.26
1762 1993 5.833082 ACATCTTAGTTATACCTGTGAGCG 58.167 41.667 0.00 0.00 0.00 5.03
1763 1994 5.593095 ACATCTTAGTTATACCTGTGAGCGA 59.407 40.000 0.00 0.00 0.00 4.93
1764 1995 5.752892 TCTTAGTTATACCTGTGAGCGAG 57.247 43.478 0.00 0.00 0.00 5.03
1765 1996 5.434408 TCTTAGTTATACCTGTGAGCGAGA 58.566 41.667 0.00 0.00 0.00 4.04
1766 1997 5.884232 TCTTAGTTATACCTGTGAGCGAGAA 59.116 40.000 0.00 0.00 0.00 2.87
1767 1998 6.546403 TCTTAGTTATACCTGTGAGCGAGAAT 59.454 38.462 0.00 0.00 0.00 2.40
1768 1999 5.189659 AGTTATACCTGTGAGCGAGAATC 57.810 43.478 0.00 0.00 0.00 2.52
1769 2000 4.645136 AGTTATACCTGTGAGCGAGAATCA 59.355 41.667 0.00 0.00 33.17 2.57
1770 2001 5.127194 AGTTATACCTGTGAGCGAGAATCAA 59.873 40.000 0.00 0.00 33.17 2.57
1771 2002 2.839486 ACCTGTGAGCGAGAATCAAA 57.161 45.000 0.00 0.00 33.17 2.69
1772 2003 2.693069 ACCTGTGAGCGAGAATCAAAG 58.307 47.619 0.00 0.00 32.64 2.77
1773 2004 2.300152 ACCTGTGAGCGAGAATCAAAGA 59.700 45.455 0.00 0.00 34.44 2.52
1774 2005 2.928757 CCTGTGAGCGAGAATCAAAGAG 59.071 50.000 0.00 0.00 34.44 2.85
1775 2006 3.367806 CCTGTGAGCGAGAATCAAAGAGA 60.368 47.826 0.00 0.00 34.44 3.10
1776 2007 4.240888 CTGTGAGCGAGAATCAAAGAGAA 58.759 43.478 0.00 0.00 34.44 2.87
1777 2008 4.631131 TGTGAGCGAGAATCAAAGAGAAA 58.369 39.130 0.00 0.00 33.17 2.52
1778 2009 5.240891 TGTGAGCGAGAATCAAAGAGAAAT 58.759 37.500 0.00 0.00 33.17 2.17
1779 2010 6.398095 TGTGAGCGAGAATCAAAGAGAAATA 58.602 36.000 0.00 0.00 33.17 1.40
1780 2011 6.311445 TGTGAGCGAGAATCAAAGAGAAATAC 59.689 38.462 0.00 0.00 33.17 1.89
1781 2012 6.533367 GTGAGCGAGAATCAAAGAGAAATACT 59.467 38.462 0.00 0.00 33.17 2.12
1782 2013 6.533012 TGAGCGAGAATCAAAGAGAAATACTG 59.467 38.462 0.00 0.00 33.17 2.74
1783 2014 6.402222 AGCGAGAATCAAAGAGAAATACTGT 58.598 36.000 0.00 0.00 33.17 3.55
1784 2015 6.876257 AGCGAGAATCAAAGAGAAATACTGTT 59.124 34.615 0.00 0.00 33.42 3.16
1785 2016 6.958193 GCGAGAATCAAAGAGAAATACTGTTG 59.042 38.462 0.00 0.00 32.37 3.33
1786 2017 7.360438 GCGAGAATCAAAGAGAAATACTGTTGT 60.360 37.037 0.00 0.00 32.37 3.32
1787 2018 8.499162 CGAGAATCAAAGAGAAATACTGTTGTT 58.501 33.333 0.00 0.00 32.37 2.83
1789 2020 9.956720 AGAATCAAAGAGAAATACTGTTGTTTG 57.043 29.630 0.00 0.00 32.37 2.93
1790 2021 9.185192 GAATCAAAGAGAAATACTGTTGTTTGG 57.815 33.333 0.00 0.00 32.37 3.28
1791 2022 7.639113 TCAAAGAGAAATACTGTTGTTTGGT 57.361 32.000 0.00 0.00 32.37 3.67
1792 2023 7.703328 TCAAAGAGAAATACTGTTGTTTGGTC 58.297 34.615 0.00 0.00 32.37 4.02
1793 2024 7.338196 TCAAAGAGAAATACTGTTGTTTGGTCA 59.662 33.333 0.00 0.00 32.37 4.02
1794 2025 7.823745 AAGAGAAATACTGTTGTTTGGTCAT 57.176 32.000 0.00 0.00 30.79 3.06
1795 2026 7.823745 AGAGAAATACTGTTGTTTGGTCATT 57.176 32.000 0.00 0.00 0.00 2.57
1796 2027 7.875971 AGAGAAATACTGTTGTTTGGTCATTC 58.124 34.615 0.00 0.00 0.00 2.67
1797 2028 7.721399 AGAGAAATACTGTTGTTTGGTCATTCT 59.279 33.333 0.00 0.00 0.00 2.40
1798 2029 8.918202 AGAAATACTGTTGTTTGGTCATTCTA 57.082 30.769 0.00 0.00 0.00 2.10
1799 2030 9.520515 AGAAATACTGTTGTTTGGTCATTCTAT 57.479 29.630 0.00 0.00 0.00 1.98
1803 2034 7.088589 ACTGTTGTTTGGTCATTCTATATGC 57.911 36.000 0.00 0.00 0.00 3.14
1804 2035 6.658816 ACTGTTGTTTGGTCATTCTATATGCA 59.341 34.615 0.00 0.00 0.00 3.96
1805 2036 6.851609 TGTTGTTTGGTCATTCTATATGCAC 58.148 36.000 0.00 0.00 0.00 4.57
1806 2037 6.658816 TGTTGTTTGGTCATTCTATATGCACT 59.341 34.615 0.00 0.00 0.00 4.40
1807 2038 6.682423 TGTTTGGTCATTCTATATGCACTG 57.318 37.500 0.00 0.00 0.00 3.66
1808 2039 6.179756 TGTTTGGTCATTCTATATGCACTGT 58.820 36.000 0.00 0.00 0.00 3.55
1809 2040 7.334858 TGTTTGGTCATTCTATATGCACTGTA 58.665 34.615 0.00 0.00 0.00 2.74
1810 2041 7.992608 TGTTTGGTCATTCTATATGCACTGTAT 59.007 33.333 0.00 0.00 0.00 2.29
1811 2042 8.840321 GTTTGGTCATTCTATATGCACTGTATT 58.160 33.333 0.00 0.00 0.00 1.89
1812 2043 7.967890 TGGTCATTCTATATGCACTGTATTG 57.032 36.000 0.00 0.00 0.00 1.90
1813 2044 7.734942 TGGTCATTCTATATGCACTGTATTGA 58.265 34.615 0.00 0.00 0.00 2.57
1814 2045 7.874528 TGGTCATTCTATATGCACTGTATTGAG 59.125 37.037 0.00 0.00 0.00 3.02
1815 2046 7.148507 GGTCATTCTATATGCACTGTATTGAGC 60.149 40.741 0.00 0.00 0.00 4.26
1816 2047 7.601886 GTCATTCTATATGCACTGTATTGAGCT 59.398 37.037 0.00 0.00 0.00 4.09
1817 2048 8.806146 TCATTCTATATGCACTGTATTGAGCTA 58.194 33.333 0.00 0.00 0.00 3.32
1818 2049 9.428097 CATTCTATATGCACTGTATTGAGCTAA 57.572 33.333 0.00 0.00 0.00 3.09
1819 2050 9.650539 ATTCTATATGCACTGTATTGAGCTAAG 57.349 33.333 0.00 0.00 0.00 2.18
1820 2051 8.183104 TCTATATGCACTGTATTGAGCTAAGT 57.817 34.615 0.00 0.00 0.00 2.24
1821 2052 8.642432 TCTATATGCACTGTATTGAGCTAAGTT 58.358 33.333 0.00 0.00 0.00 2.66
1822 2053 9.265901 CTATATGCACTGTATTGAGCTAAGTTT 57.734 33.333 0.00 0.00 0.00 2.66
1823 2054 5.611796 TGCACTGTATTGAGCTAAGTTTG 57.388 39.130 0.00 0.00 0.00 2.93
1824 2055 5.304778 TGCACTGTATTGAGCTAAGTTTGA 58.695 37.500 0.00 0.00 0.00 2.69
1825 2056 5.409520 TGCACTGTATTGAGCTAAGTTTGAG 59.590 40.000 0.00 0.00 0.00 3.02
1826 2057 5.409826 GCACTGTATTGAGCTAAGTTTGAGT 59.590 40.000 0.00 0.00 0.00 3.41
1827 2058 6.073003 GCACTGTATTGAGCTAAGTTTGAGTT 60.073 38.462 0.00 0.00 0.00 3.01
1828 2059 7.293745 CACTGTATTGAGCTAAGTTTGAGTTG 58.706 38.462 0.00 0.00 0.00 3.16
1829 2060 6.992715 ACTGTATTGAGCTAAGTTTGAGTTGT 59.007 34.615 0.00 0.00 0.00 3.32
1830 2061 7.499232 ACTGTATTGAGCTAAGTTTGAGTTGTT 59.501 33.333 0.00 0.00 0.00 2.83
1831 2062 7.639039 TGTATTGAGCTAAGTTTGAGTTGTTG 58.361 34.615 0.00 0.00 0.00 3.33
1832 2063 4.552166 TGAGCTAAGTTTGAGTTGTTGC 57.448 40.909 0.00 0.00 0.00 4.17
1833 2064 4.199310 TGAGCTAAGTTTGAGTTGTTGCT 58.801 39.130 0.00 0.00 0.00 3.91
1834 2065 4.035558 TGAGCTAAGTTTGAGTTGTTGCTG 59.964 41.667 0.00 0.00 0.00 4.41
1835 2066 3.947834 AGCTAAGTTTGAGTTGTTGCTGT 59.052 39.130 0.00 0.00 0.00 4.40
1836 2067 4.037690 GCTAAGTTTGAGTTGTTGCTGTG 58.962 43.478 0.00 0.00 0.00 3.66
1837 2068 4.201910 GCTAAGTTTGAGTTGTTGCTGTGA 60.202 41.667 0.00 0.00 0.00 3.58
1838 2069 4.782019 AAGTTTGAGTTGTTGCTGTGAA 57.218 36.364 0.00 0.00 0.00 3.18
1839 2070 4.782019 AGTTTGAGTTGTTGCTGTGAAA 57.218 36.364 0.00 0.00 0.00 2.69
1840 2071 5.132897 AGTTTGAGTTGTTGCTGTGAAAA 57.867 34.783 0.00 0.00 0.00 2.29
1841 2072 5.537188 AGTTTGAGTTGTTGCTGTGAAAAA 58.463 33.333 0.00 0.00 0.00 1.94
1842 2073 6.165577 AGTTTGAGTTGTTGCTGTGAAAAAT 58.834 32.000 0.00 0.00 0.00 1.82
1843 2074 6.650390 AGTTTGAGTTGTTGCTGTGAAAAATT 59.350 30.769 0.00 0.00 0.00 1.82
1844 2075 7.173047 AGTTTGAGTTGTTGCTGTGAAAAATTT 59.827 29.630 0.00 0.00 0.00 1.82
1845 2076 6.645700 TGAGTTGTTGCTGTGAAAAATTTC 57.354 33.333 0.00 0.00 37.69 2.17
1846 2077 6.162079 TGAGTTGTTGCTGTGAAAAATTTCA 58.838 32.000 4.52 4.52 44.31 2.69
1847 2078 6.310956 TGAGTTGTTGCTGTGAAAAATTTCAG 59.689 34.615 8.76 0.00 46.80 3.02
1848 2079 6.165577 AGTTGTTGCTGTGAAAAATTTCAGT 58.834 32.000 8.76 0.00 46.80 3.41
1849 2080 6.091169 AGTTGTTGCTGTGAAAAATTTCAGTG 59.909 34.615 8.76 6.33 46.80 3.66
1850 2081 4.869297 TGTTGCTGTGAAAAATTTCAGTGG 59.131 37.500 8.76 4.20 46.80 4.00
1851 2082 4.998671 TGCTGTGAAAAATTTCAGTGGA 57.001 36.364 8.76 4.04 46.80 4.02
1852 2083 5.336150 TGCTGTGAAAAATTTCAGTGGAA 57.664 34.783 8.76 0.00 46.80 3.53
1853 2084 5.108517 TGCTGTGAAAAATTTCAGTGGAAC 58.891 37.500 8.76 0.00 46.80 3.62
1869 2100 4.695560 ACTAGCCGAGTTGCCAAC 57.304 55.556 0.00 0.00 33.13 3.77
1870 2101 1.003718 ACTAGCCGAGTTGCCAACC 60.004 57.895 3.45 0.00 33.13 3.77
1871 2102 1.745489 CTAGCCGAGTTGCCAACCC 60.745 63.158 3.45 0.00 0.00 4.11
1872 2103 2.463589 CTAGCCGAGTTGCCAACCCA 62.464 60.000 3.45 0.00 0.00 4.51
1873 2104 2.058125 TAGCCGAGTTGCCAACCCAA 62.058 55.000 3.45 0.00 0.00 4.12
1874 2105 2.919494 GCCGAGTTGCCAACCCAAG 61.919 63.158 3.45 0.00 0.00 3.61
1875 2106 2.644992 CGAGTTGCCAACCCAAGC 59.355 61.111 3.45 0.00 0.00 4.01
1876 2107 2.192861 CGAGTTGCCAACCCAAGCA 61.193 57.895 3.45 0.00 37.18 3.91
1877 2108 1.662044 GAGTTGCCAACCCAAGCAG 59.338 57.895 3.45 0.00 40.73 4.24
1878 2109 1.076044 AGTTGCCAACCCAAGCAGT 60.076 52.632 3.45 0.00 40.73 4.40
1879 2110 1.067916 GTTGCCAACCCAAGCAGTG 59.932 57.895 0.00 0.00 40.73 3.66
1880 2111 1.381056 TTGCCAACCCAAGCAGTGT 60.381 52.632 0.00 0.00 40.73 3.55
1881 2112 1.391157 TTGCCAACCCAAGCAGTGTC 61.391 55.000 0.00 0.00 40.73 3.67
1882 2113 1.827789 GCCAACCCAAGCAGTGTCA 60.828 57.895 0.00 0.00 0.00 3.58
1883 2114 1.391157 GCCAACCCAAGCAGTGTCAA 61.391 55.000 0.00 0.00 0.00 3.18
1884 2115 1.331214 CCAACCCAAGCAGTGTCAAT 58.669 50.000 0.00 0.00 0.00 2.57
1885 2116 1.000060 CCAACCCAAGCAGTGTCAATG 60.000 52.381 0.00 0.00 0.00 2.82
1886 2117 0.675633 AACCCAAGCAGTGTCAATGC 59.324 50.000 17.27 17.27 44.18 3.56
1895 2126 4.691860 GCAGTGTCAATGCTTACATCTT 57.308 40.909 17.67 0.00 40.59 2.40
1992 2223 2.494059 TGAAGGGAAAACTCGAGCAAG 58.506 47.619 13.61 0.00 0.00 4.01
2148 2384 2.352225 CGAGTAAGCTGTCACTGCTTCT 60.352 50.000 23.74 19.20 43.24 2.85
2149 2385 3.658709 GAGTAAGCTGTCACTGCTTCTT 58.341 45.455 23.74 13.89 43.24 2.52
2286 2522 5.505654 GCAACAGCAGTGCTTAAAGTAAAGA 60.506 40.000 16.89 0.00 36.40 2.52
2469 2705 7.820872 CACAATCCTCAAAATAAATGGCTCTTT 59.179 33.333 0.00 0.00 0.00 2.52
2611 2847 0.969149 TGCACCATTCAGTCGAGACT 59.031 50.000 0.00 0.00 43.61 3.24
2718 2954 9.280174 TGATTTTCCCTACTTAACACAACTTAG 57.720 33.333 0.00 0.00 0.00 2.18
2790 3026 6.563422 TGTCAGTTTTCTGTCAATTTCTTGG 58.437 36.000 0.00 0.00 46.98 3.61
2843 3079 0.802494 AAGCACCGCCAGATAAAACG 59.198 50.000 0.00 0.00 0.00 3.60
2865 3101 9.715121 AAACGAATAAAAGGTATTGTCTGTCTA 57.285 29.630 0.00 0.00 0.00 2.59
2933 3169 2.200373 AGCCTGATTTACCAAAGCGT 57.800 45.000 0.00 0.00 0.00 5.07
3036 3272 2.156917 CACATGTCAACAGAGCCACAT 58.843 47.619 0.00 0.00 0.00 3.21
3039 3275 3.008375 ACATGTCAACAGAGCCACATACT 59.992 43.478 0.00 0.00 0.00 2.12
3169 3405 5.108385 GTTTATGTGACCAGAAACACAGG 57.892 43.478 7.77 0.00 46.83 4.00
3178 3414 2.802816 CCAGAAACACAGGACGAAGAAG 59.197 50.000 0.00 0.00 0.00 2.85
3179 3415 3.492656 CCAGAAACACAGGACGAAGAAGA 60.493 47.826 0.00 0.00 0.00 2.87
3282 3518 7.724305 TCATCTTGTAGTTTTAGTGTTCCAC 57.276 36.000 0.00 0.00 34.10 4.02
3465 3701 3.549625 GCAGTGCATATAAAGGCTTCAGC 60.550 47.826 11.09 1.35 41.14 4.26
3485 3721 8.911918 TTCAGCACTCAAGGTAAAGTAATTTA 57.088 30.769 0.00 0.00 0.00 1.40
3663 3899 4.495690 TGATCAATCCGTTTACCCATGA 57.504 40.909 0.00 0.00 0.00 3.07
3807 4049 1.814429 ATACGATCCCAATCCACCCA 58.186 50.000 0.00 0.00 0.00 4.51
4056 4301 5.355350 GCTCATATGTACAAGAAAAGTGGCT 59.645 40.000 0.00 0.00 0.00 4.75
4117 4362 9.856488 GATCACTTCCTTTAAAGGGAAAATAAC 57.144 33.333 29.72 14.06 46.47 1.89
4121 4366 9.996554 ACTTCCTTTAAAGGGAAAATAACAATG 57.003 29.630 29.72 11.10 46.47 2.82
4243 4488 6.939622 TCTAGTGATCTTTGAAATGCTCTCA 58.060 36.000 0.00 0.00 0.00 3.27
4276 4521 7.144722 TCACACTGTCCAATGAAACAATATC 57.855 36.000 0.00 0.00 0.00 1.63
4368 4613 4.221703 AGGACTCAAACATAGAGGACACTG 59.778 45.833 0.00 0.00 37.43 3.66
4372 4617 6.169094 ACTCAAACATAGAGGACACTGATTG 58.831 40.000 0.00 0.00 37.43 2.67
4406 4651 3.375782 ACTTGTAGTGAACCACCGTAC 57.624 47.619 0.00 0.00 34.49 3.67
4468 4713 3.338249 TCTGCCTTTCACTAATGCACTC 58.662 45.455 0.00 0.00 34.32 3.51
4584 4829 3.057245 GTGAGGCCACAAAGGAAAATCTC 60.057 47.826 3.76 0.00 42.72 2.75
4638 4883 1.280421 GTCCCTTCCAGCTCAGATGTT 59.720 52.381 0.00 0.00 0.00 2.71
4922 5167 1.903183 GTAGAGGTCTGTTGCTTCCCT 59.097 52.381 0.00 0.00 0.00 4.20
4990 5236 0.822121 ACAGCGGTCCCTTTTGTTCC 60.822 55.000 0.00 0.00 0.00 3.62
5016 5262 4.122776 ACTGATCATAGCCATTTGTCGTC 58.877 43.478 0.00 0.00 0.00 4.20
5030 5276 3.297830 TGTCGTCGACATGTCTGAATT 57.702 42.857 23.70 0.00 37.67 2.17
5091 6492 0.250038 TGCTCTTCTGTGTGTCCTGC 60.250 55.000 0.00 0.00 0.00 4.85
5098 6499 1.486310 TCTGTGTGTCCTGCTTGAAGT 59.514 47.619 0.00 0.00 0.00 3.01
5103 6504 4.275689 TGTGTGTCCTGCTTGAAGTAATTG 59.724 41.667 0.00 0.00 0.00 2.32
5159 6560 5.025826 GGGTAAGAAAATTATGTGCGAACG 58.974 41.667 0.00 0.00 0.00 3.95
5169 6571 1.990799 TGTGCGAACGTCCTATCTTG 58.009 50.000 0.00 0.00 0.00 3.02
5310 6712 8.458843 GTGCTTCTAATAAGTTTGCCTTTGATA 58.541 33.333 0.00 0.00 34.46 2.15
5393 7054 7.936496 TTGATCCATCAATGCAAAGTTACTA 57.064 32.000 0.00 0.00 41.51 1.82
5394 7055 8.523915 TTGATCCATCAATGCAAAGTTACTAT 57.476 30.769 0.00 0.00 41.51 2.12
5396 7057 9.056005 TGATCCATCAATGCAAAGTTACTATAC 57.944 33.333 0.00 0.00 33.08 1.47
5397 7058 9.277783 GATCCATCAATGCAAAGTTACTATACT 57.722 33.333 0.00 0.00 0.00 2.12
5531 7207 2.026356 CACTGGGTGTTCATATGGGTCA 60.026 50.000 2.13 0.00 0.00 4.02
5652 7330 8.854614 TTCCTTTTTCTTTGGAAATTTGTTCA 57.145 26.923 0.00 0.00 40.57 3.18
5653 7331 9.460019 TTCCTTTTTCTTTGGAAATTTGTTCAT 57.540 25.926 0.00 0.00 40.57 2.57
5654 7332 9.460019 TCCTTTTTCTTTGGAAATTTGTTCATT 57.540 25.926 0.00 0.00 40.57 2.57
5655 7333 9.505995 CCTTTTTCTTTGGAAATTTGTTCATTG 57.494 29.630 0.00 0.00 40.57 2.82
5752 7430 9.698309 TTTGTTGATCAAGTTAAAAAGTGTTCA 57.302 25.926 8.80 0.00 37.35 3.18
5753 7431 8.682128 TGTTGATCAAGTTAAAAAGTGTTCAC 57.318 30.769 8.80 0.00 0.00 3.18
5754 7432 7.757624 TGTTGATCAAGTTAAAAAGTGTTCACC 59.242 33.333 8.80 0.00 0.00 4.02
5755 7433 7.397892 TGATCAAGTTAAAAAGTGTTCACCA 57.602 32.000 0.00 0.00 0.00 4.17
5756 7434 8.006298 TGATCAAGTTAAAAAGTGTTCACCAT 57.994 30.769 0.00 0.00 0.00 3.55
5757 7435 9.126151 TGATCAAGTTAAAAAGTGTTCACCATA 57.874 29.630 0.00 0.00 0.00 2.74
5760 7438 9.959749 TCAAGTTAAAAAGTGTTCACCATATTC 57.040 29.630 0.00 0.00 0.00 1.75
5761 7439 9.743057 CAAGTTAAAAAGTGTTCACCATATTCA 57.257 29.630 0.00 0.00 0.00 2.57
5769 7447 9.612066 AAAGTGTTCACCATATTCAAAATTTGT 57.388 25.926 5.56 0.00 0.00 2.83
5770 7448 9.612066 AAGTGTTCACCATATTCAAAATTTGTT 57.388 25.926 5.56 0.00 0.00 2.83
5771 7449 9.260002 AGTGTTCACCATATTCAAAATTTGTTC 57.740 29.630 5.56 0.00 0.00 3.18
5772 7450 9.039870 GTGTTCACCATATTCAAAATTTGTTCA 57.960 29.630 5.56 0.00 0.00 3.18
5773 7451 9.775854 TGTTCACCATATTCAAAATTTGTTCAT 57.224 25.926 5.56 0.29 0.00 2.57
5775 7453 9.993454 TTCACCATATTCAAAATTTGTTCATCA 57.007 25.926 5.56 0.00 0.00 3.07
5776 7454 9.993454 TCACCATATTCAAAATTTGTTCATCAA 57.007 25.926 5.56 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.334329 GGTCGTTTTGATCGGCGTTTT 60.334 47.619 6.85 0.00 33.53 2.43
1 2 0.236449 GGTCGTTTTGATCGGCGTTT 59.764 50.000 6.85 0.00 33.53 3.60
2 3 1.864176 GGTCGTTTTGATCGGCGTT 59.136 52.632 6.85 0.00 33.53 4.84
3 4 3.557824 GGTCGTTTTGATCGGCGT 58.442 55.556 6.85 0.00 33.53 5.68
8 9 0.734942 TCTCGCCGGTCGTTTTGATC 60.735 55.000 16.00 0.00 39.67 2.92
9 10 0.736325 CTCTCGCCGGTCGTTTTGAT 60.736 55.000 16.00 0.00 39.67 2.57
10 11 1.372499 CTCTCGCCGGTCGTTTTGA 60.372 57.895 16.00 10.26 39.67 2.69
11 12 1.344942 CTCTCTCGCCGGTCGTTTTG 61.345 60.000 16.00 7.31 39.67 2.44
12 13 1.080705 CTCTCTCGCCGGTCGTTTT 60.081 57.895 16.00 0.00 39.67 2.43
13 14 2.567049 CTCTCTCGCCGGTCGTTT 59.433 61.111 16.00 0.00 39.67 3.60
14 15 3.441290 CCTCTCTCGCCGGTCGTT 61.441 66.667 16.00 0.00 39.67 3.85
17 18 1.885163 TTTTCCCTCTCTCGCCGGTC 61.885 60.000 1.90 0.00 0.00 4.79
18 19 1.477685 TTTTTCCCTCTCTCGCCGGT 61.478 55.000 1.90 0.00 0.00 5.28
19 20 1.295423 TTTTTCCCTCTCTCGCCGG 59.705 57.895 0.00 0.00 0.00 6.13
34 35 2.207229 GCCCTTGCTCCGGGTTTTT 61.207 57.895 0.00 0.00 43.92 1.94
35 36 2.600470 GCCCTTGCTCCGGGTTTT 60.600 61.111 0.00 0.00 43.92 2.43
45 46 0.893727 TCTTTTTCCCGAGCCCTTGC 60.894 55.000 0.00 0.00 37.95 4.01
46 47 0.881796 GTCTTTTTCCCGAGCCCTTG 59.118 55.000 0.00 0.00 0.00 3.61
47 48 0.771755 AGTCTTTTTCCCGAGCCCTT 59.228 50.000 0.00 0.00 0.00 3.95
48 49 0.325272 GAGTCTTTTTCCCGAGCCCT 59.675 55.000 0.00 0.00 0.00 5.19
49 50 0.325272 AGAGTCTTTTTCCCGAGCCC 59.675 55.000 0.00 0.00 0.00 5.19
50 51 1.276705 AGAGAGTCTTTTTCCCGAGCC 59.723 52.381 0.00 0.00 0.00 4.70
51 52 2.753055 AGAGAGTCTTTTTCCCGAGC 57.247 50.000 0.00 0.00 0.00 5.03
52 53 3.131400 CCCTAGAGAGTCTTTTTCCCGAG 59.869 52.174 0.00 0.00 0.00 4.63
53 54 3.097614 CCCTAGAGAGTCTTTTTCCCGA 58.902 50.000 0.00 0.00 0.00 5.14
54 55 2.418884 GCCCTAGAGAGTCTTTTTCCCG 60.419 54.545 0.00 0.00 0.00 5.14
55 56 2.572104 TGCCCTAGAGAGTCTTTTTCCC 59.428 50.000 0.00 0.00 0.00 3.97
56 57 3.867857 CTGCCCTAGAGAGTCTTTTTCC 58.132 50.000 0.00 0.00 0.00 3.13
57 58 3.266636 GCTGCCCTAGAGAGTCTTTTTC 58.733 50.000 0.00 0.00 0.00 2.29
58 59 2.026729 GGCTGCCCTAGAGAGTCTTTTT 60.027 50.000 7.66 0.00 0.00 1.94
59 60 1.557371 GGCTGCCCTAGAGAGTCTTTT 59.443 52.381 7.66 0.00 0.00 2.27
60 61 1.199615 GGCTGCCCTAGAGAGTCTTT 58.800 55.000 7.66 0.00 0.00 2.52
61 62 1.040339 CGGCTGCCCTAGAGAGTCTT 61.040 60.000 14.12 0.00 0.00 3.01
62 63 1.454847 CGGCTGCCCTAGAGAGTCT 60.455 63.158 14.12 0.00 0.00 3.24
63 64 2.494530 CCGGCTGCCCTAGAGAGTC 61.495 68.421 14.12 0.00 0.00 3.36
64 65 2.443016 CCGGCTGCCCTAGAGAGT 60.443 66.667 14.12 0.00 0.00 3.24
65 66 3.922640 GCCGGCTGCCCTAGAGAG 61.923 72.222 22.15 0.00 0.00 3.20
90 91 4.424711 TAGGGTACGTCCGCCGGT 62.425 66.667 1.63 0.00 42.24 5.28
91 92 3.589881 CTAGGGTACGTCCGCCGG 61.590 72.222 0.00 0.00 42.24 6.13
92 93 2.940890 TACCTAGGGTACGTCCGCCG 62.941 65.000 14.81 0.00 38.83 6.46
93 94 1.152963 TACCTAGGGTACGTCCGCC 60.153 63.158 14.81 0.00 37.09 6.13
94 95 4.559502 TACCTAGGGTACGTCCGC 57.440 61.111 14.81 0.00 37.09 5.54
132 133 4.077184 TCGGCCACCATGACCGTC 62.077 66.667 2.24 0.00 46.92 4.79
133 134 4.388499 GTCGGCCACCATGACCGT 62.388 66.667 2.24 0.00 46.92 4.83
135 136 2.436646 CAGTCGGCCACCATGACC 60.437 66.667 2.24 0.00 33.09 4.02
136 137 3.127533 GCAGTCGGCCACCATGAC 61.128 66.667 2.24 0.79 36.11 3.06
169 170 3.810896 CAAACCTTAGCCGCCGCC 61.811 66.667 0.00 0.00 34.57 6.13
170 171 3.810896 CCAAACCTTAGCCGCCGC 61.811 66.667 0.00 0.00 0.00 6.53
171 172 1.436983 GATCCAAACCTTAGCCGCCG 61.437 60.000 0.00 0.00 0.00 6.46
172 173 1.436983 CGATCCAAACCTTAGCCGCC 61.437 60.000 0.00 0.00 0.00 6.13
173 174 0.743345 ACGATCCAAACCTTAGCCGC 60.743 55.000 0.00 0.00 0.00 6.53
174 175 1.006832 CACGATCCAAACCTTAGCCG 58.993 55.000 0.00 0.00 0.00 5.52
175 176 2.396590 TCACGATCCAAACCTTAGCC 57.603 50.000 0.00 0.00 0.00 3.93
176 177 4.511826 CCTAATCACGATCCAAACCTTAGC 59.488 45.833 0.00 0.00 0.00 3.09
177 178 4.511826 GCCTAATCACGATCCAAACCTTAG 59.488 45.833 0.00 0.00 0.00 2.18
178 179 4.163458 AGCCTAATCACGATCCAAACCTTA 59.837 41.667 0.00 0.00 0.00 2.69
179 180 3.054361 AGCCTAATCACGATCCAAACCTT 60.054 43.478 0.00 0.00 0.00 3.50
180 181 2.505819 AGCCTAATCACGATCCAAACCT 59.494 45.455 0.00 0.00 0.00 3.50
181 182 2.614057 CAGCCTAATCACGATCCAAACC 59.386 50.000 0.00 0.00 0.00 3.27
182 183 3.531538 TCAGCCTAATCACGATCCAAAC 58.468 45.455 0.00 0.00 0.00 2.93
183 184 3.904800 TCAGCCTAATCACGATCCAAA 57.095 42.857 0.00 0.00 0.00 3.28
184 185 4.262463 GGTATCAGCCTAATCACGATCCAA 60.262 45.833 0.00 0.00 0.00 3.53
185 186 3.258372 GGTATCAGCCTAATCACGATCCA 59.742 47.826 0.00 0.00 0.00 3.41
186 187 3.258372 TGGTATCAGCCTAATCACGATCC 59.742 47.826 0.00 0.00 0.00 3.36
187 188 4.521130 TGGTATCAGCCTAATCACGATC 57.479 45.455 0.00 0.00 0.00 3.69
188 189 4.284490 ACATGGTATCAGCCTAATCACGAT 59.716 41.667 0.00 0.00 0.00 3.73
189 190 3.641436 ACATGGTATCAGCCTAATCACGA 59.359 43.478 0.00 0.00 0.00 4.35
190 191 3.995199 ACATGGTATCAGCCTAATCACG 58.005 45.455 0.00 0.00 0.00 4.35
191 192 7.801716 TTTAACATGGTATCAGCCTAATCAC 57.198 36.000 0.00 0.00 0.00 3.06
192 193 7.502226 CCTTTTAACATGGTATCAGCCTAATCA 59.498 37.037 0.00 0.00 0.00 2.57
193 194 7.040409 CCCTTTTAACATGGTATCAGCCTAATC 60.040 40.741 0.00 0.00 0.00 1.75
194 195 6.777580 CCCTTTTAACATGGTATCAGCCTAAT 59.222 38.462 0.00 0.00 0.00 1.73
195 196 6.069323 TCCCTTTTAACATGGTATCAGCCTAA 60.069 38.462 0.00 0.00 0.00 2.69
196 197 5.430417 TCCCTTTTAACATGGTATCAGCCTA 59.570 40.000 0.00 0.00 0.00 3.93
197 198 4.229582 TCCCTTTTAACATGGTATCAGCCT 59.770 41.667 0.00 0.00 0.00 4.58
198 199 4.532834 TCCCTTTTAACATGGTATCAGCC 58.467 43.478 0.00 0.00 0.00 4.85
199 200 5.437060 TCTCCCTTTTAACATGGTATCAGC 58.563 41.667 0.00 0.00 0.00 4.26
200 201 6.889198 TCTCTCCCTTTTAACATGGTATCAG 58.111 40.000 0.00 0.00 0.00 2.90
201 202 6.672218 TCTCTCTCCCTTTTAACATGGTATCA 59.328 38.462 0.00 0.00 0.00 2.15
202 203 7.125792 TCTCTCTCCCTTTTAACATGGTATC 57.874 40.000 0.00 0.00 0.00 2.24
203 204 6.100424 CCTCTCTCTCCCTTTTAACATGGTAT 59.900 42.308 0.00 0.00 0.00 2.73
204 205 5.425539 CCTCTCTCTCCCTTTTAACATGGTA 59.574 44.000 0.00 0.00 0.00 3.25
205 206 4.226168 CCTCTCTCTCCCTTTTAACATGGT 59.774 45.833 0.00 0.00 0.00 3.55
206 207 4.471386 TCCTCTCTCTCCCTTTTAACATGG 59.529 45.833 0.00 0.00 0.00 3.66
207 208 5.683876 TCCTCTCTCTCCCTTTTAACATG 57.316 43.478 0.00 0.00 0.00 3.21
208 209 6.353429 CCAATCCTCTCTCTCCCTTTTAACAT 60.353 42.308 0.00 0.00 0.00 2.71
209 210 5.045578 CCAATCCTCTCTCTCCCTTTTAACA 60.046 44.000 0.00 0.00 0.00 2.41
210 211 5.045505 ACCAATCCTCTCTCTCCCTTTTAAC 60.046 44.000 0.00 0.00 0.00 2.01
211 212 5.101529 ACCAATCCTCTCTCTCCCTTTTAA 58.898 41.667 0.00 0.00 0.00 1.52
212 213 4.699994 ACCAATCCTCTCTCTCCCTTTTA 58.300 43.478 0.00 0.00 0.00 1.52
213 214 3.536287 ACCAATCCTCTCTCTCCCTTTT 58.464 45.455 0.00 0.00 0.00 2.27
214 215 3.213160 ACCAATCCTCTCTCTCCCTTT 57.787 47.619 0.00 0.00 0.00 3.11
215 216 2.959421 ACCAATCCTCTCTCTCCCTT 57.041 50.000 0.00 0.00 0.00 3.95
216 217 3.135279 TCTACCAATCCTCTCTCTCCCT 58.865 50.000 0.00 0.00 0.00 4.20
217 218 3.603965 TCTACCAATCCTCTCTCTCCC 57.396 52.381 0.00 0.00 0.00 4.30
218 219 6.311735 ACTATTCTACCAATCCTCTCTCTCC 58.688 44.000 0.00 0.00 0.00 3.71
219 220 7.308348 CGAACTATTCTACCAATCCTCTCTCTC 60.308 44.444 0.00 0.00 0.00 3.20
220 221 6.488683 CGAACTATTCTACCAATCCTCTCTCT 59.511 42.308 0.00 0.00 0.00 3.10
221 222 6.263617 ACGAACTATTCTACCAATCCTCTCTC 59.736 42.308 0.00 0.00 0.00 3.20
222 223 6.130569 ACGAACTATTCTACCAATCCTCTCT 58.869 40.000 0.00 0.00 0.00 3.10
223 224 6.394025 ACGAACTATTCTACCAATCCTCTC 57.606 41.667 0.00 0.00 0.00 3.20
224 225 6.154706 ACAACGAACTATTCTACCAATCCTCT 59.845 38.462 0.00 0.00 0.00 3.69
225 226 6.338937 ACAACGAACTATTCTACCAATCCTC 58.661 40.000 0.00 0.00 0.00 3.71
226 227 6.295719 ACAACGAACTATTCTACCAATCCT 57.704 37.500 0.00 0.00 0.00 3.24
227 228 8.548721 CAATACAACGAACTATTCTACCAATCC 58.451 37.037 0.00 0.00 0.00 3.01
228 229 8.062448 GCAATACAACGAACTATTCTACCAATC 58.938 37.037 0.00 0.00 0.00 2.67
229 230 7.012044 GGCAATACAACGAACTATTCTACCAAT 59.988 37.037 0.00 0.00 0.00 3.16
230 231 6.314400 GGCAATACAACGAACTATTCTACCAA 59.686 38.462 0.00 0.00 0.00 3.67
231 232 5.813672 GGCAATACAACGAACTATTCTACCA 59.186 40.000 0.00 0.00 0.00 3.25
232 233 6.018994 CAGGCAATACAACGAACTATTCTACC 60.019 42.308 0.00 0.00 0.00 3.18
233 234 6.755141 TCAGGCAATACAACGAACTATTCTAC 59.245 38.462 0.00 0.00 0.00 2.59
234 235 6.869695 TCAGGCAATACAACGAACTATTCTA 58.130 36.000 0.00 0.00 0.00 2.10
235 236 5.730550 TCAGGCAATACAACGAACTATTCT 58.269 37.500 0.00 0.00 0.00 2.40
236 237 5.502544 GCTCAGGCAATACAACGAACTATTC 60.503 44.000 0.00 0.00 38.54 1.75
237 238 4.332819 GCTCAGGCAATACAACGAACTATT 59.667 41.667 0.00 0.00 38.54 1.73
238 239 3.871594 GCTCAGGCAATACAACGAACTAT 59.128 43.478 0.00 0.00 38.54 2.12
239 240 3.259064 GCTCAGGCAATACAACGAACTA 58.741 45.455 0.00 0.00 38.54 2.24
240 241 2.076863 GCTCAGGCAATACAACGAACT 58.923 47.619 0.00 0.00 38.54 3.01
241 242 1.130561 GGCTCAGGCAATACAACGAAC 59.869 52.381 0.00 0.00 40.87 3.95
242 243 1.003118 AGGCTCAGGCAATACAACGAA 59.997 47.619 0.00 0.00 40.87 3.85
243 244 0.613260 AGGCTCAGGCAATACAACGA 59.387 50.000 0.00 0.00 40.87 3.85
244 245 1.009829 GAGGCTCAGGCAATACAACG 58.990 55.000 10.25 0.00 40.87 4.10
245 246 2.113860 TGAGGCTCAGGCAATACAAC 57.886 50.000 14.43 0.00 40.87 3.32
246 247 4.454678 CTTATGAGGCTCAGGCAATACAA 58.545 43.478 23.24 5.60 40.87 2.41
247 248 3.745480 GCTTATGAGGCTCAGGCAATACA 60.745 47.826 23.24 0.00 40.87 2.29
248 249 2.810852 GCTTATGAGGCTCAGGCAATAC 59.189 50.000 23.24 8.12 40.87 1.89
249 250 2.439135 TGCTTATGAGGCTCAGGCAATA 59.561 45.455 27.83 13.43 40.87 1.90
250 251 1.213678 TGCTTATGAGGCTCAGGCAAT 59.786 47.619 27.83 14.31 40.87 3.56
251 252 0.620030 TGCTTATGAGGCTCAGGCAA 59.380 50.000 27.83 18.78 40.87 4.52
252 253 0.841961 ATGCTTATGAGGCTCAGGCA 59.158 50.000 30.13 30.13 40.87 4.75
253 254 2.847327 TATGCTTATGAGGCTCAGGC 57.153 50.000 23.24 23.48 37.82 4.85
254 255 9.306777 TCTATATATATGCTTATGAGGCTCAGG 57.693 37.037 23.24 15.43 0.00 3.86
284 285 8.726068 CGAAGTAGATCATGTAGTAGATCATGT 58.274 37.037 0.00 0.00 42.36 3.21
285 286 8.940952 TCGAAGTAGATCATGTAGTAGATCATG 58.059 37.037 0.00 0.00 42.36 3.07
286 287 9.161629 CTCGAAGTAGATCATGTAGTAGATCAT 57.838 37.037 0.00 0.00 42.36 2.45
287 288 8.151596 ACTCGAAGTAGATCATGTAGTAGATCA 58.848 37.037 0.00 0.00 42.36 2.92
288 289 8.542497 ACTCGAAGTAGATCATGTAGTAGATC 57.458 38.462 0.00 0.00 40.68 2.75
289 290 9.426837 GTACTCGAAGTAGATCATGTAGTAGAT 57.573 37.037 0.00 0.00 30.12 1.98
290 291 8.419442 TGTACTCGAAGTAGATCATGTAGTAGA 58.581 37.037 0.00 0.00 30.12 2.59
291 292 8.590719 TGTACTCGAAGTAGATCATGTAGTAG 57.409 38.462 0.00 0.00 30.12 2.57
292 293 8.953368 TTGTACTCGAAGTAGATCATGTAGTA 57.047 34.615 0.00 0.00 30.12 1.82
293 294 7.012515 CCTTGTACTCGAAGTAGATCATGTAGT 59.987 40.741 0.00 0.00 30.12 2.73
294 295 7.356540 CCTTGTACTCGAAGTAGATCATGTAG 58.643 42.308 0.00 0.00 30.12 2.74
295 296 6.238676 GCCTTGTACTCGAAGTAGATCATGTA 60.239 42.308 0.00 0.00 30.12 2.29
296 297 5.450688 GCCTTGTACTCGAAGTAGATCATGT 60.451 44.000 0.00 0.00 30.12 3.21
297 298 4.979197 GCCTTGTACTCGAAGTAGATCATG 59.021 45.833 0.00 0.00 30.12 3.07
298 299 4.645136 TGCCTTGTACTCGAAGTAGATCAT 59.355 41.667 0.00 0.00 30.12 2.45
299 300 4.014406 TGCCTTGTACTCGAAGTAGATCA 58.986 43.478 0.00 0.00 30.12 2.92
300 301 4.634184 TGCCTTGTACTCGAAGTAGATC 57.366 45.455 0.00 0.00 30.12 2.75
301 302 4.678309 GCTTGCCTTGTACTCGAAGTAGAT 60.678 45.833 0.00 0.00 30.12 1.98
302 303 3.367087 GCTTGCCTTGTACTCGAAGTAGA 60.367 47.826 0.00 0.00 30.12 2.59
303 304 2.924290 GCTTGCCTTGTACTCGAAGTAG 59.076 50.000 0.00 0.00 30.12 2.57
304 305 2.353406 GGCTTGCCTTGTACTCGAAGTA 60.353 50.000 4.11 0.00 0.00 2.24
305 306 1.608283 GGCTTGCCTTGTACTCGAAGT 60.608 52.381 4.11 0.00 0.00 3.01
306 307 1.079503 GGCTTGCCTTGTACTCGAAG 58.920 55.000 4.11 0.00 0.00 3.79
307 308 0.394938 TGGCTTGCCTTGTACTCGAA 59.605 50.000 13.18 0.00 0.00 3.71
308 309 0.037326 CTGGCTTGCCTTGTACTCGA 60.037 55.000 13.18 0.00 0.00 4.04
309 310 0.037326 TCTGGCTTGCCTTGTACTCG 60.037 55.000 13.18 0.00 0.00 4.18
310 311 2.185004 TTCTGGCTTGCCTTGTACTC 57.815 50.000 13.18 0.00 0.00 2.59
311 312 2.887151 ATTCTGGCTTGCCTTGTACT 57.113 45.000 13.18 0.00 0.00 2.73
312 313 4.036852 GGAATATTCTGGCTTGCCTTGTAC 59.963 45.833 14.95 0.00 0.00 2.90
313 314 4.079787 AGGAATATTCTGGCTTGCCTTGTA 60.080 41.667 14.95 0.81 0.00 2.41
314 315 3.026694 GGAATATTCTGGCTTGCCTTGT 58.973 45.455 14.95 0.00 0.00 3.16
315 316 3.294214 AGGAATATTCTGGCTTGCCTTG 58.706 45.455 14.95 6.10 0.00 3.61
316 317 3.677156 AGGAATATTCTGGCTTGCCTT 57.323 42.857 14.95 0.00 0.00 4.35
317 318 3.718956 ACTAGGAATATTCTGGCTTGCCT 59.281 43.478 14.95 4.58 0.00 4.75
318 319 4.068599 GACTAGGAATATTCTGGCTTGCC 58.931 47.826 14.95 4.43 0.00 4.52
319 320 4.967036 AGACTAGGAATATTCTGGCTTGC 58.033 43.478 14.95 0.00 0.00 4.01
320 321 8.592809 AGATTAGACTAGGAATATTCTGGCTTG 58.407 37.037 14.95 7.54 0.00 4.01
321 322 8.734593 AGATTAGACTAGGAATATTCTGGCTT 57.265 34.615 14.95 0.63 0.00 4.35
348 349 9.478768 TGAGTAACGTGATTGTATTAGAAAACA 57.521 29.630 0.00 0.00 0.00 2.83
351 352 9.478768 TGTTGAGTAACGTGATTGTATTAGAAA 57.521 29.630 0.00 0.00 39.71 2.52
352 353 9.135843 CTGTTGAGTAACGTGATTGTATTAGAA 57.864 33.333 0.00 0.00 39.71 2.10
353 354 8.301720 ACTGTTGAGTAACGTGATTGTATTAGA 58.698 33.333 0.00 0.00 39.71 2.10
354 355 8.462143 ACTGTTGAGTAACGTGATTGTATTAG 57.538 34.615 0.00 0.00 39.71 1.73
355 356 8.821147 AACTGTTGAGTAACGTGATTGTATTA 57.179 30.769 0.00 0.00 39.71 0.98
356 357 7.724305 AACTGTTGAGTAACGTGATTGTATT 57.276 32.000 0.00 0.00 39.71 1.89
357 358 7.724305 AAACTGTTGAGTAACGTGATTGTAT 57.276 32.000 0.00 0.00 39.71 2.29
358 359 7.493320 AGAAAACTGTTGAGTAACGTGATTGTA 59.507 33.333 0.00 0.00 39.71 2.41
359 360 6.315393 AGAAAACTGTTGAGTAACGTGATTGT 59.685 34.615 0.00 0.00 39.71 2.71
360 361 6.715464 AGAAAACTGTTGAGTAACGTGATTG 58.285 36.000 0.00 0.00 39.71 2.67
361 362 6.920569 AGAAAACTGTTGAGTAACGTGATT 57.079 33.333 0.00 0.00 39.71 2.57
362 363 7.208080 AGTAGAAAACTGTTGAGTAACGTGAT 58.792 34.615 0.00 0.00 39.71 3.06
363 364 6.567050 AGTAGAAAACTGTTGAGTAACGTGA 58.433 36.000 0.00 0.00 39.71 4.35
364 365 6.823678 AGTAGAAAACTGTTGAGTAACGTG 57.176 37.500 0.00 0.00 39.71 4.49
365 366 7.710896 ACTAGTAGAAAACTGTTGAGTAACGT 58.289 34.615 3.59 0.00 39.39 3.99
366 367 8.571461 AACTAGTAGAAAACTGTTGAGTAACG 57.429 34.615 3.59 0.00 39.39 3.18
368 369 9.880157 ACAAACTAGTAGAAAACTGTTGAGTAA 57.120 29.630 3.59 0.00 39.39 2.24
369 370 9.309516 CACAAACTAGTAGAAAACTGTTGAGTA 57.690 33.333 3.59 0.00 39.39 2.59
370 371 8.038944 TCACAAACTAGTAGAAAACTGTTGAGT 58.961 33.333 3.59 0.00 39.39 3.41
371 372 8.420374 TCACAAACTAGTAGAAAACTGTTGAG 57.580 34.615 3.59 0.00 39.39 3.02
372 373 8.780846 TTCACAAACTAGTAGAAAACTGTTGA 57.219 30.769 3.59 0.00 39.39 3.18
373 374 9.490663 CTTTCACAAACTAGTAGAAAACTGTTG 57.509 33.333 3.59 0.00 39.39 3.33
374 375 8.674607 CCTTTCACAAACTAGTAGAAAACTGTT 58.325 33.333 3.59 0.00 39.39 3.16
375 376 7.201705 GCCTTTCACAAACTAGTAGAAAACTGT 60.202 37.037 3.59 0.00 39.39 3.55
376 377 7.132863 GCCTTTCACAAACTAGTAGAAAACTG 58.867 38.462 3.59 0.00 39.39 3.16
377 378 6.262496 GGCCTTTCACAAACTAGTAGAAAACT 59.738 38.462 3.59 0.00 42.62 2.66
378 379 6.262496 AGGCCTTTCACAAACTAGTAGAAAAC 59.738 38.462 0.00 1.19 0.00 2.43
379 380 6.362248 AGGCCTTTCACAAACTAGTAGAAAA 58.638 36.000 0.00 0.00 0.00 2.29
380 381 5.937111 AGGCCTTTCACAAACTAGTAGAAA 58.063 37.500 0.00 4.41 0.00 2.52
381 382 5.562298 AGGCCTTTCACAAACTAGTAGAA 57.438 39.130 0.00 0.00 0.00 2.10
382 383 6.014647 TCTAGGCCTTTCACAAACTAGTAGA 58.985 40.000 12.58 0.00 32.07 2.59
383 384 6.282199 TCTAGGCCTTTCACAAACTAGTAG 57.718 41.667 12.58 0.00 32.07 2.57
384 385 6.675413 TTCTAGGCCTTTCACAAACTAGTA 57.325 37.500 12.58 0.00 32.07 1.82
385 386 5.562298 TTCTAGGCCTTTCACAAACTAGT 57.438 39.130 12.58 0.00 32.07 2.57
386 387 6.231211 TCTTTCTAGGCCTTTCACAAACTAG 58.769 40.000 12.58 0.00 0.00 2.57
387 388 6.182507 TCTTTCTAGGCCTTTCACAAACTA 57.817 37.500 12.58 0.00 0.00 2.24
388 389 5.048846 TCTTTCTAGGCCTTTCACAAACT 57.951 39.130 12.58 0.00 0.00 2.66
389 390 5.767816 TTCTTTCTAGGCCTTTCACAAAC 57.232 39.130 12.58 0.00 0.00 2.93
390 391 5.301805 CCTTTCTTTCTAGGCCTTTCACAAA 59.698 40.000 12.58 2.90 0.00 2.83
391 392 4.827284 CCTTTCTTTCTAGGCCTTTCACAA 59.173 41.667 12.58 0.00 0.00 3.33
392 393 4.104102 TCCTTTCTTTCTAGGCCTTTCACA 59.896 41.667 12.58 0.00 0.00 3.58
393 394 4.652822 TCCTTTCTTTCTAGGCCTTTCAC 58.347 43.478 12.58 0.00 0.00 3.18
394 395 4.993705 TCCTTTCTTTCTAGGCCTTTCA 57.006 40.909 12.58 0.00 0.00 2.69
395 396 5.182190 CAGTTCCTTTCTTTCTAGGCCTTTC 59.818 44.000 12.58 0.00 0.00 2.62
396 397 5.073428 CAGTTCCTTTCTTTCTAGGCCTTT 58.927 41.667 12.58 0.00 0.00 3.11
397 398 4.657013 CAGTTCCTTTCTTTCTAGGCCTT 58.343 43.478 12.58 0.00 0.00 4.35
398 399 3.560239 GCAGTTCCTTTCTTTCTAGGCCT 60.560 47.826 11.78 11.78 0.00 5.19
399 400 2.750166 GCAGTTCCTTTCTTTCTAGGCC 59.250 50.000 0.00 0.00 0.00 5.19
400 401 2.750166 GGCAGTTCCTTTCTTTCTAGGC 59.250 50.000 0.00 0.00 0.00 3.93
401 402 3.003480 CGGCAGTTCCTTTCTTTCTAGG 58.997 50.000 0.00 0.00 0.00 3.02
402 403 3.003480 CCGGCAGTTCCTTTCTTTCTAG 58.997 50.000 0.00 0.00 0.00 2.43
403 404 2.635915 TCCGGCAGTTCCTTTCTTTCTA 59.364 45.455 0.00 0.00 0.00 2.10
404 405 1.420138 TCCGGCAGTTCCTTTCTTTCT 59.580 47.619 0.00 0.00 0.00 2.52
405 406 1.892209 TCCGGCAGTTCCTTTCTTTC 58.108 50.000 0.00 0.00 0.00 2.62
406 407 2.040412 AGATCCGGCAGTTCCTTTCTTT 59.960 45.455 0.00 0.00 0.00 2.52
407 408 1.630878 AGATCCGGCAGTTCCTTTCTT 59.369 47.619 0.00 0.00 0.00 2.52
408 409 1.280457 AGATCCGGCAGTTCCTTTCT 58.720 50.000 0.00 0.00 0.00 2.52
409 410 2.010497 GAAGATCCGGCAGTTCCTTTC 58.990 52.381 0.00 0.00 0.00 2.62
410 411 1.351017 TGAAGATCCGGCAGTTCCTTT 59.649 47.619 0.00 0.00 0.00 3.11
411 412 0.984230 TGAAGATCCGGCAGTTCCTT 59.016 50.000 0.00 0.00 0.00 3.36
412 413 1.139853 GATGAAGATCCGGCAGTTCCT 59.860 52.381 0.00 0.00 0.00 3.36
413 414 1.134401 TGATGAAGATCCGGCAGTTCC 60.134 52.381 0.00 0.00 0.00 3.62
414 415 2.315925 TGATGAAGATCCGGCAGTTC 57.684 50.000 0.00 0.00 0.00 3.01
415 416 2.486191 GGATGATGAAGATCCGGCAGTT 60.486 50.000 0.00 0.00 30.30 3.16
416 417 1.071385 GGATGATGAAGATCCGGCAGT 59.929 52.381 0.00 0.00 30.30 4.40
417 418 1.347050 AGGATGATGAAGATCCGGCAG 59.653 52.381 0.00 0.00 43.78 4.85
418 419 1.427809 AGGATGATGAAGATCCGGCA 58.572 50.000 0.00 0.00 43.78 5.69
419 420 2.149578 CAAGGATGATGAAGATCCGGC 58.850 52.381 0.00 0.00 43.78 6.13
420 421 2.149578 GCAAGGATGATGAAGATCCGG 58.850 52.381 0.00 0.00 43.78 5.14
421 422 1.797046 CGCAAGGATGATGAAGATCCG 59.203 52.381 0.00 0.00 43.78 4.18
422 423 2.805099 GACGCAAGGATGATGAAGATCC 59.195 50.000 0.00 0.00 46.39 3.36
423 424 3.247173 GTGACGCAAGGATGATGAAGATC 59.753 47.826 0.00 0.00 46.39 2.75
424 425 3.118482 AGTGACGCAAGGATGATGAAGAT 60.118 43.478 0.00 0.00 46.39 2.40
425 426 2.234661 AGTGACGCAAGGATGATGAAGA 59.765 45.455 0.00 0.00 46.39 2.87
426 427 2.625737 AGTGACGCAAGGATGATGAAG 58.374 47.619 0.00 0.00 46.39 3.02
427 428 2.768253 AGTGACGCAAGGATGATGAA 57.232 45.000 0.00 0.00 46.39 2.57
428 429 5.529581 TTATAGTGACGCAAGGATGATGA 57.470 39.130 0.00 0.00 46.39 2.92
429 430 6.791887 AATTATAGTGACGCAAGGATGATG 57.208 37.500 0.00 0.00 46.39 3.07
430 431 6.874134 GGTAATTATAGTGACGCAAGGATGAT 59.126 38.462 0.00 0.00 46.39 2.45
431 432 6.183360 TGGTAATTATAGTGACGCAAGGATGA 60.183 38.462 0.00 0.00 46.39 2.92
440 441 8.761497 ACATTTTCGATGGTAATTATAGTGACG 58.239 33.333 0.00 0.00 0.00 4.35
453 454 4.690280 GGCAAATTGAACATTTTCGATGGT 59.310 37.500 0.00 0.00 36.16 3.55
481 482 1.071567 GTCAGGTACGAGCAACGAGC 61.072 60.000 10.05 0.00 45.77 5.03
482 483 3.017232 GTCAGGTACGAGCAACGAG 57.983 57.895 10.05 0.00 45.77 4.18
552 589 1.202428 GCCGCGATAGGAAGAACTCTT 60.202 52.381 8.23 0.00 39.23 2.85
585 622 7.948357 TCTTTTTAGCCTTCCCTAAAGAAAAC 58.052 34.615 0.00 0.00 38.23 2.43
590 629 6.813649 GCATTTCTTTTTAGCCTTCCCTAAAG 59.186 38.462 0.00 0.00 38.23 1.85
606 645 4.549458 CACGTGAATGGAAGCATTTCTTT 58.451 39.130 10.90 0.00 34.56 2.52
607 646 3.057315 CCACGTGAATGGAAGCATTTCTT 60.057 43.478 19.30 0.00 43.02 2.52
608 647 2.489329 CCACGTGAATGGAAGCATTTCT 59.511 45.455 19.30 0.00 43.02 2.52
609 648 2.867429 CCACGTGAATGGAAGCATTTC 58.133 47.619 19.30 0.00 43.02 2.17
610 649 1.067635 GCCACGTGAATGGAAGCATTT 60.068 47.619 19.30 0.00 43.02 2.32
611 650 0.527565 GCCACGTGAATGGAAGCATT 59.472 50.000 19.30 0.00 43.02 3.56
612 651 0.608856 TGCCACGTGAATGGAAGCAT 60.609 50.000 19.30 0.00 43.02 3.79
688 737 0.268869 ATGGACTGGGATGGGCTAGA 59.731 55.000 0.00 0.00 0.00 2.43
1070 1133 3.248171 CTTAGACAGCGCGCGACC 61.248 66.667 37.18 17.71 0.00 4.79
1269 1344 2.256461 CTGCTGTTTTGCCCGAGC 59.744 61.111 0.00 0.00 40.48 5.03
1271 1346 3.294493 GCCTGCTGTTTTGCCCGA 61.294 61.111 0.00 0.00 0.00 5.14
1274 1349 2.256461 CGAGCCTGCTGTTTTGCC 59.744 61.111 0.00 0.00 0.00 4.52
1300 1380 1.802960 ACGAACTGCAGAATTGAGCTG 59.197 47.619 23.35 1.85 36.47 4.24
1307 1387 1.880027 GGAACCAACGAACTGCAGAAT 59.120 47.619 23.35 8.80 0.00 2.40
1329 1409 1.078778 TAGGCATCAGCGCGGAAAA 60.079 52.632 15.65 0.00 43.41 2.29
1398 1478 1.393539 CTGACATACGTTTTCTGGGCG 59.606 52.381 0.00 0.00 0.00 6.13
1438 1518 3.885901 GCCCCTTTCTCATAGGAATGAAC 59.114 47.826 0.00 0.00 41.57 3.18
1461 1541 6.082338 CCTCAGAATTCAGAAACATCAAACG 58.918 40.000 8.44 0.00 0.00 3.60
1644 1725 7.912056 CATCTAAACAAGAACAGAGATGGAA 57.088 36.000 0.00 0.00 37.89 3.53
1746 1977 4.645136 TGATTCTCGCTCACAGGTATAACT 59.355 41.667 0.00 0.00 0.00 2.24
1747 1978 4.933330 TGATTCTCGCTCACAGGTATAAC 58.067 43.478 0.00 0.00 0.00 1.89
1748 1979 5.592104 TTGATTCTCGCTCACAGGTATAA 57.408 39.130 0.00 0.00 0.00 0.98
1749 1980 5.359860 TCTTTGATTCTCGCTCACAGGTATA 59.640 40.000 0.00 0.00 0.00 1.47
1750 1981 4.160439 TCTTTGATTCTCGCTCACAGGTAT 59.840 41.667 0.00 0.00 0.00 2.73
1751 1982 3.509967 TCTTTGATTCTCGCTCACAGGTA 59.490 43.478 0.00 0.00 0.00 3.08
1752 1983 2.300152 TCTTTGATTCTCGCTCACAGGT 59.700 45.455 0.00 0.00 0.00 4.00
1753 1984 2.928757 CTCTTTGATTCTCGCTCACAGG 59.071 50.000 0.00 0.00 0.00 4.00
1754 1985 3.842820 TCTCTTTGATTCTCGCTCACAG 58.157 45.455 0.00 0.00 0.00 3.66
1755 1986 3.942130 TCTCTTTGATTCTCGCTCACA 57.058 42.857 0.00 0.00 0.00 3.58
1756 1987 5.793026 ATTTCTCTTTGATTCTCGCTCAC 57.207 39.130 0.00 0.00 0.00 3.51
1757 1988 6.533012 CAGTATTTCTCTTTGATTCTCGCTCA 59.467 38.462 0.00 0.00 0.00 4.26
1758 1989 6.533367 ACAGTATTTCTCTTTGATTCTCGCTC 59.467 38.462 0.00 0.00 0.00 5.03
1759 1990 6.402222 ACAGTATTTCTCTTTGATTCTCGCT 58.598 36.000 0.00 0.00 0.00 4.93
1760 1991 6.654793 ACAGTATTTCTCTTTGATTCTCGC 57.345 37.500 0.00 0.00 0.00 5.03
1761 1992 8.023050 ACAACAGTATTTCTCTTTGATTCTCG 57.977 34.615 0.00 0.00 0.00 4.04
1763 1994 9.956720 CAAACAACAGTATTTCTCTTTGATTCT 57.043 29.630 0.00 0.00 0.00 2.40
1764 1995 9.185192 CCAAACAACAGTATTTCTCTTTGATTC 57.815 33.333 0.00 0.00 0.00 2.52
1765 1996 8.695456 ACCAAACAACAGTATTTCTCTTTGATT 58.305 29.630 0.00 0.00 0.00 2.57
1766 1997 8.237811 ACCAAACAACAGTATTTCTCTTTGAT 57.762 30.769 0.00 0.00 0.00 2.57
1767 1998 7.338196 TGACCAAACAACAGTATTTCTCTTTGA 59.662 33.333 0.00 0.00 0.00 2.69
1768 1999 7.479980 TGACCAAACAACAGTATTTCTCTTTG 58.520 34.615 0.00 0.00 0.00 2.77
1769 2000 7.639113 TGACCAAACAACAGTATTTCTCTTT 57.361 32.000 0.00 0.00 0.00 2.52
1770 2001 7.823745 ATGACCAAACAACAGTATTTCTCTT 57.176 32.000 0.00 0.00 0.00 2.85
1771 2002 7.721399 AGAATGACCAAACAACAGTATTTCTCT 59.279 33.333 0.00 0.00 0.00 3.10
1772 2003 7.875971 AGAATGACCAAACAACAGTATTTCTC 58.124 34.615 0.00 0.00 0.00 2.87
1773 2004 7.823745 AGAATGACCAAACAACAGTATTTCT 57.176 32.000 0.00 0.00 0.00 2.52
1777 2008 8.840321 GCATATAGAATGACCAAACAACAGTAT 58.160 33.333 0.00 0.00 0.00 2.12
1778 2009 7.826744 TGCATATAGAATGACCAAACAACAGTA 59.173 33.333 0.00 0.00 0.00 2.74
1779 2010 6.658816 TGCATATAGAATGACCAAACAACAGT 59.341 34.615 0.00 0.00 0.00 3.55
1780 2011 6.968904 GTGCATATAGAATGACCAAACAACAG 59.031 38.462 0.00 0.00 0.00 3.16
1781 2012 6.658816 AGTGCATATAGAATGACCAAACAACA 59.341 34.615 0.00 0.00 0.00 3.33
1782 2013 6.968904 CAGTGCATATAGAATGACCAAACAAC 59.031 38.462 0.00 0.00 0.00 3.32
1783 2014 6.658816 ACAGTGCATATAGAATGACCAAACAA 59.341 34.615 0.00 0.00 0.00 2.83
1784 2015 6.179756 ACAGTGCATATAGAATGACCAAACA 58.820 36.000 0.00 0.00 0.00 2.83
1785 2016 6.683974 ACAGTGCATATAGAATGACCAAAC 57.316 37.500 0.00 0.00 0.00 2.93
1786 2017 8.839343 CAATACAGTGCATATAGAATGACCAAA 58.161 33.333 0.00 0.00 0.00 3.28
1787 2018 8.210265 TCAATACAGTGCATATAGAATGACCAA 58.790 33.333 0.00 0.00 0.00 3.67
1788 2019 7.734942 TCAATACAGTGCATATAGAATGACCA 58.265 34.615 0.00 0.00 0.00 4.02
1789 2020 7.148507 GCTCAATACAGTGCATATAGAATGACC 60.149 40.741 0.00 0.00 0.00 4.02
1790 2021 7.601886 AGCTCAATACAGTGCATATAGAATGAC 59.398 37.037 0.00 0.00 0.00 3.06
1791 2022 7.674120 AGCTCAATACAGTGCATATAGAATGA 58.326 34.615 0.00 0.00 0.00 2.57
1792 2023 7.902387 AGCTCAATACAGTGCATATAGAATG 57.098 36.000 0.00 0.00 0.00 2.67
1793 2024 9.650539 CTTAGCTCAATACAGTGCATATAGAAT 57.349 33.333 0.00 0.00 0.00 2.40
1794 2025 8.642432 ACTTAGCTCAATACAGTGCATATAGAA 58.358 33.333 0.00 0.00 0.00 2.10
1795 2026 8.183104 ACTTAGCTCAATACAGTGCATATAGA 57.817 34.615 0.00 0.00 0.00 1.98
1796 2027 8.824159 AACTTAGCTCAATACAGTGCATATAG 57.176 34.615 0.00 0.00 0.00 1.31
1797 2028 9.045223 CAAACTTAGCTCAATACAGTGCATATA 57.955 33.333 0.00 0.00 0.00 0.86
1798 2029 7.770433 TCAAACTTAGCTCAATACAGTGCATAT 59.230 33.333 0.00 0.00 0.00 1.78
1799 2030 7.102993 TCAAACTTAGCTCAATACAGTGCATA 58.897 34.615 0.00 0.00 0.00 3.14
1800 2031 5.939883 TCAAACTTAGCTCAATACAGTGCAT 59.060 36.000 0.00 0.00 0.00 3.96
1801 2032 5.304778 TCAAACTTAGCTCAATACAGTGCA 58.695 37.500 0.00 0.00 0.00 4.57
1802 2033 5.409826 ACTCAAACTTAGCTCAATACAGTGC 59.590 40.000 0.00 0.00 0.00 4.40
1803 2034 7.041780 ACAACTCAAACTTAGCTCAATACAGTG 60.042 37.037 0.00 0.00 0.00 3.66
1804 2035 6.992715 ACAACTCAAACTTAGCTCAATACAGT 59.007 34.615 0.00 0.00 0.00 3.55
1805 2036 7.426929 ACAACTCAAACTTAGCTCAATACAG 57.573 36.000 0.00 0.00 0.00 2.74
1806 2037 7.639039 CAACAACTCAAACTTAGCTCAATACA 58.361 34.615 0.00 0.00 0.00 2.29
1807 2038 6.578919 GCAACAACTCAAACTTAGCTCAATAC 59.421 38.462 0.00 0.00 0.00 1.89
1808 2039 6.486657 AGCAACAACTCAAACTTAGCTCAATA 59.513 34.615 0.00 0.00 0.00 1.90
1809 2040 5.300286 AGCAACAACTCAAACTTAGCTCAAT 59.700 36.000 0.00 0.00 0.00 2.57
1810 2041 4.640201 AGCAACAACTCAAACTTAGCTCAA 59.360 37.500 0.00 0.00 0.00 3.02
1811 2042 4.035558 CAGCAACAACTCAAACTTAGCTCA 59.964 41.667 0.00 0.00 0.00 4.26
1812 2043 4.035675 ACAGCAACAACTCAAACTTAGCTC 59.964 41.667 0.00 0.00 0.00 4.09
1813 2044 3.947834 ACAGCAACAACTCAAACTTAGCT 59.052 39.130 0.00 0.00 0.00 3.32
1814 2045 4.037690 CACAGCAACAACTCAAACTTAGC 58.962 43.478 0.00 0.00 0.00 3.09
1815 2046 5.484173 TCACAGCAACAACTCAAACTTAG 57.516 39.130 0.00 0.00 0.00 2.18
1816 2047 5.888691 TTCACAGCAACAACTCAAACTTA 57.111 34.783 0.00 0.00 0.00 2.24
1817 2048 4.782019 TTCACAGCAACAACTCAAACTT 57.218 36.364 0.00 0.00 0.00 2.66
1818 2049 4.782019 TTTCACAGCAACAACTCAAACT 57.218 36.364 0.00 0.00 0.00 2.66
1819 2050 5.837586 TTTTTCACAGCAACAACTCAAAC 57.162 34.783 0.00 0.00 0.00 2.93
1820 2051 7.172190 TGAAATTTTTCACAGCAACAACTCAAA 59.828 29.630 1.66 0.00 41.88 2.69
1821 2052 6.648310 TGAAATTTTTCACAGCAACAACTCAA 59.352 30.769 1.66 0.00 41.88 3.02
1822 2053 6.162079 TGAAATTTTTCACAGCAACAACTCA 58.838 32.000 1.66 0.00 41.88 3.41
1823 2054 6.311200 ACTGAAATTTTTCACAGCAACAACTC 59.689 34.615 1.66 0.00 41.88 3.01
1824 2055 6.091169 CACTGAAATTTTTCACAGCAACAACT 59.909 34.615 1.66 0.00 41.88 3.16
1825 2056 6.242829 CACTGAAATTTTTCACAGCAACAAC 58.757 36.000 1.66 0.00 41.88 3.32
1826 2057 5.350914 CCACTGAAATTTTTCACAGCAACAA 59.649 36.000 1.66 0.00 41.88 2.83
1827 2058 4.869297 CCACTGAAATTTTTCACAGCAACA 59.131 37.500 1.66 0.00 41.88 3.33
1828 2059 5.108517 TCCACTGAAATTTTTCACAGCAAC 58.891 37.500 1.66 0.00 41.88 4.17
1829 2060 5.336150 TCCACTGAAATTTTTCACAGCAA 57.664 34.783 1.66 0.00 41.88 3.91
1830 2061 4.998671 TCCACTGAAATTTTTCACAGCA 57.001 36.364 1.66 0.00 41.88 4.41
1831 2062 5.351458 AGTTCCACTGAAATTTTTCACAGC 58.649 37.500 1.66 0.00 41.88 4.40
1832 2063 6.638468 GCTAGTTCCACTGAAATTTTTCACAG 59.362 38.462 1.66 0.00 41.88 3.66
1833 2064 6.460953 GGCTAGTTCCACTGAAATTTTTCACA 60.461 38.462 1.66 0.00 41.88 3.58
1834 2065 5.920840 GGCTAGTTCCACTGAAATTTTTCAC 59.079 40.000 1.66 0.00 41.88 3.18
1835 2066 5.278266 CGGCTAGTTCCACTGAAATTTTTCA 60.278 40.000 5.67 5.67 44.31 2.69
1836 2067 5.048991 TCGGCTAGTTCCACTGAAATTTTTC 60.049 40.000 0.00 0.00 37.69 2.29
1837 2068 4.825085 TCGGCTAGTTCCACTGAAATTTTT 59.175 37.500 0.00 0.00 30.29 1.94
1838 2069 4.394729 TCGGCTAGTTCCACTGAAATTTT 58.605 39.130 0.00 0.00 30.29 1.82
1839 2070 4.003648 CTCGGCTAGTTCCACTGAAATTT 58.996 43.478 0.00 0.00 30.29 1.82
1840 2071 3.008049 ACTCGGCTAGTTCCACTGAAATT 59.992 43.478 0.00 0.00 33.35 1.82
1841 2072 2.567615 ACTCGGCTAGTTCCACTGAAAT 59.432 45.455 0.00 0.00 33.35 2.17
1842 2073 1.968493 ACTCGGCTAGTTCCACTGAAA 59.032 47.619 0.00 0.00 33.35 2.69
1843 2074 1.629043 ACTCGGCTAGTTCCACTGAA 58.371 50.000 0.00 0.00 33.35 3.02
1844 2075 1.272490 CAACTCGGCTAGTTCCACTGA 59.728 52.381 0.81 0.00 45.64 3.41
1845 2076 1.714794 CAACTCGGCTAGTTCCACTG 58.285 55.000 0.81 0.00 45.64 3.66
1846 2077 0.037232 GCAACTCGGCTAGTTCCACT 60.037 55.000 0.81 0.00 45.64 4.00
1847 2078 1.019805 GGCAACTCGGCTAGTTCCAC 61.020 60.000 0.81 0.00 45.64 4.02
1848 2079 1.295423 GGCAACTCGGCTAGTTCCA 59.705 57.895 0.81 0.00 45.64 3.53
1849 2080 0.321298 TTGGCAACTCGGCTAGTTCC 60.321 55.000 0.81 7.29 45.64 3.62
1850 2081 0.796927 GTTGGCAACTCGGCTAGTTC 59.203 55.000 22.66 0.00 45.64 3.01
1852 2083 1.003718 GGTTGGCAACTCGGCTAGT 60.004 57.895 27.77 0.00 41.49 2.57
1853 2084 1.745489 GGGTTGGCAACTCGGCTAG 60.745 63.158 27.77 0.00 41.89 3.42
1854 2085 2.058125 TTGGGTTGGCAACTCGGCTA 62.058 55.000 27.77 7.12 41.89 3.93
1855 2086 3.429372 TTGGGTTGGCAACTCGGCT 62.429 57.895 27.77 0.00 41.89 5.52
1856 2087 2.909965 TTGGGTTGGCAACTCGGC 60.910 61.111 27.77 12.46 41.67 5.54
1857 2088 2.919494 GCTTGGGTTGGCAACTCGG 61.919 63.158 27.77 21.14 33.43 4.63
1858 2089 2.133742 CTGCTTGGGTTGGCAACTCG 62.134 60.000 27.77 14.70 38.02 4.18
1859 2090 1.109323 ACTGCTTGGGTTGGCAACTC 61.109 55.000 27.77 25.63 38.02 3.01
1860 2091 1.076044 ACTGCTTGGGTTGGCAACT 60.076 52.632 27.77 4.51 38.02 3.16
1861 2092 1.067916 CACTGCTTGGGTTGGCAAC 59.932 57.895 21.92 21.92 38.02 4.17
1862 2093 1.381056 ACACTGCTTGGGTTGGCAA 60.381 52.632 0.00 0.00 38.02 4.52
1863 2094 1.827789 GACACTGCTTGGGTTGGCA 60.828 57.895 0.00 0.00 36.94 4.92
1864 2095 1.391157 TTGACACTGCTTGGGTTGGC 61.391 55.000 0.00 0.00 28.59 4.52
1865 2096 1.000060 CATTGACACTGCTTGGGTTGG 60.000 52.381 0.00 0.00 28.59 3.77
1866 2097 1.603678 GCATTGACACTGCTTGGGTTG 60.604 52.381 10.32 0.00 36.68 3.77
1867 2098 0.675633 GCATTGACACTGCTTGGGTT 59.324 50.000 10.32 0.00 36.68 4.11
1868 2099 2.344535 GCATTGACACTGCTTGGGT 58.655 52.632 10.32 0.00 36.68 4.51
1874 2105 4.691860 AAGATGTAAGCATTGACACTGC 57.308 40.909 9.63 9.63 39.97 4.40
1875 2106 6.974932 ACTAAGATGTAAGCATTGACACTG 57.025 37.500 0.00 0.00 35.07 3.66
1878 2109 9.542462 GGTATAACTAAGATGTAAGCATTGACA 57.458 33.333 0.00 0.00 35.07 3.58
1879 2110 9.765795 AGGTATAACTAAGATGTAAGCATTGAC 57.234 33.333 0.00 0.00 35.07 3.18
1880 2111 9.764363 CAGGTATAACTAAGATGTAAGCATTGA 57.236 33.333 0.00 0.00 35.07 2.57
1881 2112 9.547753 ACAGGTATAACTAAGATGTAAGCATTG 57.452 33.333 0.00 0.00 35.07 2.82
1882 2113 9.547753 CACAGGTATAACTAAGATGTAAGCATT 57.452 33.333 0.00 0.00 35.07 3.56
1883 2114 8.924303 TCACAGGTATAACTAAGATGTAAGCAT 58.076 33.333 0.00 0.00 38.18 3.79
1884 2115 8.301252 TCACAGGTATAACTAAGATGTAAGCA 57.699 34.615 0.00 0.00 0.00 3.91
1885 2116 9.032420 GTTCACAGGTATAACTAAGATGTAAGC 57.968 37.037 0.00 0.00 0.00 3.09
1886 2117 9.234384 CGTTCACAGGTATAACTAAGATGTAAG 57.766 37.037 0.00 0.00 0.00 2.34
1887 2118 8.959548 TCGTTCACAGGTATAACTAAGATGTAA 58.040 33.333 0.00 0.00 0.00 2.41
1888 2119 8.510243 TCGTTCACAGGTATAACTAAGATGTA 57.490 34.615 0.00 0.00 0.00 2.29
1889 2120 7.338703 TCTCGTTCACAGGTATAACTAAGATGT 59.661 37.037 0.00 0.00 0.00 3.06
1890 2121 7.704271 TCTCGTTCACAGGTATAACTAAGATG 58.296 38.462 0.00 0.00 0.00 2.90
1891 2122 7.876936 TCTCGTTCACAGGTATAACTAAGAT 57.123 36.000 0.00 0.00 0.00 2.40
1892 2123 7.692460 TTCTCGTTCACAGGTATAACTAAGA 57.308 36.000 0.00 0.00 0.00 2.10
1893 2124 8.188799 TGATTCTCGTTCACAGGTATAACTAAG 58.811 37.037 0.00 0.00 0.00 2.18
1894 2125 8.058667 TGATTCTCGTTCACAGGTATAACTAA 57.941 34.615 0.00 0.00 0.00 2.24
1895 2126 7.634671 TGATTCTCGTTCACAGGTATAACTA 57.365 36.000 0.00 0.00 0.00 2.24
2159 2395 9.996554 TCTTAGTATTGACAGTTGAAAATCTCA 57.003 29.630 0.00 0.00 0.00 3.27
2286 2522 4.635699 ACTTTACCTCAATTCCCGAAGT 57.364 40.909 0.00 0.00 0.00 3.01
2346 2582 6.982724 CAGGATGGAAAGAAAATAATCAAGCC 59.017 38.462 0.00 0.00 0.00 4.35
2611 2847 6.715280 AGGAGAAGAATGAGCTTTACATTGA 58.285 36.000 4.00 0.00 37.96 2.57
2718 2954 6.849811 GCTGAAGGTAAAGTAGAAACGAAAAC 59.150 38.462 0.00 0.00 0.00 2.43
2865 3101 6.712547 GCATTGCCTCTCAAGTATAGGTAAAT 59.287 38.462 0.00 0.00 38.29 1.40
2933 3169 9.159364 CACTGATGTTCTGAATCAATAGAAAGA 57.841 33.333 0.00 0.00 34.95 2.52
3036 3272 2.503331 CAGTGGGTTGCACATCAAGTA 58.497 47.619 0.00 0.00 34.91 2.24
3039 3275 0.184692 TCCAGTGGGTTGCACATCAA 59.815 50.000 9.92 0.00 34.93 2.57
3178 3414 4.963628 ACCCTGGGTTTAGTCTAGAAGATC 59.036 45.833 14.05 0.00 27.29 2.75
3179 3415 4.961585 ACCCTGGGTTTAGTCTAGAAGAT 58.038 43.478 14.05 0.00 27.29 2.40
3282 3518 7.829725 TCTCCATTATTTGGTTCATCAAGTTG 58.170 34.615 0.00 0.00 46.52 3.16
3663 3899 8.784043 GCACCGTGATAAGGATTAATAAATCTT 58.216 33.333 1.65 0.00 41.18 2.40
3807 4049 3.058914 GTGCATTACGTTGAGTTTCTGCT 60.059 43.478 0.00 0.00 33.93 4.24
3931 4175 2.028420 ATGAGCATGCTACGCTTGAA 57.972 45.000 22.74 0.00 40.63 2.69
3982 4226 1.202417 ACCATTCCTGTACGAGCGATG 60.202 52.381 0.00 0.00 0.00 3.84
4117 4362 8.761575 AAGGAATTGCAATTACAGTAACATTG 57.238 30.769 31.15 0.00 31.40 2.82
4121 4366 8.810652 TGAAAAGGAATTGCAATTACAGTAAC 57.189 30.769 31.15 19.28 31.40 2.50
4162 4407 3.412386 GTGGTTCTGGCTGTTGAGTATT 58.588 45.455 0.00 0.00 0.00 1.89
4243 4488 6.946340 TCATTGGACAGTGTGATGTACTATT 58.054 36.000 0.00 0.00 34.89 1.73
4276 4521 7.381323 AGAAAAATAATTTCTGAGCCAACTGG 58.619 34.615 2.83 0.00 37.37 4.00
4368 4613 8.507249 ACTACAAGTAGAATCAAGTTTGCAATC 58.493 33.333 13.79 0.00 36.97 2.67
4372 4617 7.421530 TCACTACAAGTAGAATCAAGTTTGC 57.578 36.000 13.79 0.00 36.97 3.68
4406 4651 4.158764 AGACTTTACCTCGTCTCTTCATGG 59.841 45.833 0.00 0.00 35.72 3.66
4468 4713 7.754851 TGATTCCATGTTCCATTCAGATATG 57.245 36.000 0.00 0.00 0.00 1.78
4499 4744 5.909610 GGAGATTTTCTGCACATATTTACGC 59.090 40.000 0.00 0.00 34.73 4.42
4584 4829 2.169832 TTTCCTCTTGCTTGGTCTCG 57.830 50.000 0.00 0.00 0.00 4.04
4638 4883 1.348696 TCTTTGCTCTGCTCCATCACA 59.651 47.619 0.00 0.00 0.00 3.58
4990 5236 5.277202 CGACAAATGGCTATGATCAGTTCTG 60.277 44.000 0.09 0.00 0.00 3.02
5016 5262 3.062639 GGCACTGTAATTCAGACATGTCG 59.937 47.826 19.85 14.52 46.27 4.35
5030 5276 1.885887 GCTGTTGGAATTGGCACTGTA 59.114 47.619 0.00 0.00 0.00 2.74
5091 6492 8.773645 TGACAGATAACACACAATTACTTCAAG 58.226 33.333 0.00 0.00 0.00 3.02
5098 6499 9.546428 CCATCTATGACAGATAACACACAATTA 57.454 33.333 0.00 0.00 42.40 1.40
5103 6504 4.752101 GCCCATCTATGACAGATAACACAC 59.248 45.833 0.00 0.00 42.40 3.82
5120 6521 5.324409 TCTTACCCAAATATCATGCCCATC 58.676 41.667 0.00 0.00 0.00 3.51
5159 6560 4.034510 GCTTGCACACATACAAGATAGGAC 59.965 45.833 6.91 0.00 44.89 3.85
5169 6571 7.213252 CAAGATTATTTGCTTGCACACATAC 57.787 36.000 0.00 0.00 35.59 2.39
5484 7157 2.667874 TTGCACGCCATTCGCTCA 60.668 55.556 0.00 0.00 43.23 4.26
5627 7305 8.854614 TGAACAAATTTCCAAAGAAAAAGGAA 57.145 26.923 0.00 0.00 44.91 3.36
5628 7306 9.460019 AATGAACAAATTTCCAAAGAAAAAGGA 57.540 25.926 0.00 0.00 44.91 3.36
5629 7307 9.505995 CAATGAACAAATTTCCAAAGAAAAAGG 57.494 29.630 0.00 0.00 44.91 3.11
5726 7404 9.698309 TGAACACTTTTTAACTTGATCAACAAA 57.302 25.926 3.38 2.82 38.08 2.83
5727 7405 9.134734 GTGAACACTTTTTAACTTGATCAACAA 57.865 29.630 3.38 0.00 36.97 2.83
5728 7406 7.757624 GGTGAACACTTTTTAACTTGATCAACA 59.242 33.333 3.38 0.00 30.92 3.33
5729 7407 7.757624 TGGTGAACACTTTTTAACTTGATCAAC 59.242 33.333 3.38 0.00 31.14 3.18
5730 7408 7.831753 TGGTGAACACTTTTTAACTTGATCAA 58.168 30.769 8.12 8.12 0.00 2.57
5731 7409 7.397892 TGGTGAACACTTTTTAACTTGATCA 57.602 32.000 4.96 0.00 0.00 2.92
5734 7412 9.959749 GAATATGGTGAACACTTTTTAACTTGA 57.040 29.630 4.96 0.00 0.00 3.02
5735 7413 9.743057 TGAATATGGTGAACACTTTTTAACTTG 57.257 29.630 4.96 0.00 0.00 3.16
5743 7421 9.612066 ACAAATTTTGAATATGGTGAACACTTT 57.388 25.926 15.81 0.00 0.00 2.66
5744 7422 9.612066 AACAAATTTTGAATATGGTGAACACTT 57.388 25.926 15.81 0.00 0.00 3.16
5745 7423 9.260002 GAACAAATTTTGAATATGGTGAACACT 57.740 29.630 15.81 0.00 0.00 3.55
5746 7424 9.039870 TGAACAAATTTTGAATATGGTGAACAC 57.960 29.630 15.81 0.00 0.00 3.32
5747 7425 9.775854 ATGAACAAATTTTGAATATGGTGAACA 57.224 25.926 15.81 0.00 0.00 3.18
5749 7427 9.993454 TGATGAACAAATTTTGAATATGGTGAA 57.007 25.926 15.81 0.00 0.00 3.18
5750 7428 9.993454 TTGATGAACAAATTTTGAATATGGTGA 57.007 25.926 15.81 0.00 35.39 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.