Multiple sequence alignment - TraesCS6D01G347500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G347500 chr6D 100.000 3482 0 0 1 3482 446101844 446105325 0.000000e+00 6431.0
1 TraesCS6D01G347500 chr6D 88.402 776 68 17 2715 3477 231962115 231961349 0.000000e+00 915.0
2 TraesCS6D01G347500 chr6D 87.596 782 78 15 2703 3477 272164876 272165645 0.000000e+00 889.0
3 TraesCS6D01G347500 chr6D 81.096 365 62 6 1040 1399 420569126 420568764 5.690000e-73 285.0
4 TraesCS6D01G347500 chr6B 94.471 1682 75 7 894 2570 674327159 674328827 0.000000e+00 2575.0
5 TraesCS6D01G347500 chr6B 89.196 398 29 7 390 778 674326704 674327096 5.230000e-133 484.0
6 TraesCS6D01G347500 chr6B 92.188 64 4 1 61 123 687089503 687089566 4.790000e-14 89.8
7 TraesCS6D01G347500 chr6A 91.486 1656 108 16 964 2609 592814301 592812669 0.000000e+00 2246.0
8 TraesCS6D01G347500 chr6A 93.194 1528 92 5 975 2501 592818471 592816955 0.000000e+00 2235.0
9 TraesCS6D01G347500 chr6A 84.770 499 32 23 400 874 592818995 592818517 8.810000e-126 460.0
10 TraesCS6D01G347500 chr6A 81.096 365 62 6 1040 1399 563484793 563485155 5.690000e-73 285.0
11 TraesCS6D01G347500 chr6A 84.519 239 21 9 643 874 592814589 592814360 4.520000e-54 222.0
12 TraesCS6D01G347500 chr6A 94.872 39 2 0 2571 2609 592816897 592816859 1.040000e-05 62.1
13 TraesCS6D01G347500 chr1D 92.698 808 53 5 2675 3477 272994674 272993868 0.000000e+00 1160.0
14 TraesCS6D01G347500 chr7D 90.476 777 49 18 2714 3476 502855324 502856089 0.000000e+00 1002.0
15 TraesCS6D01G347500 chr7D 92.240 683 49 3 2800 3482 557216749 557216071 0.000000e+00 965.0
16 TraesCS6D01G347500 chr7D 89.119 772 65 13 2714 3476 220481517 220482278 0.000000e+00 942.0
17 TraesCS6D01G347500 chr7D 88.417 777 75 11 2714 3481 494826238 494827008 0.000000e+00 922.0
18 TraesCS6D01G347500 chr7D 92.982 57 3 1 70 126 156034014 156033959 8.010000e-12 82.4
19 TraesCS6D01G347500 chr4D 89.673 794 68 11 2693 3477 127121551 127120763 0.000000e+00 1000.0
20 TraesCS6D01G347500 chr4D 89.322 796 67 14 2693 3477 127144113 127143325 0.000000e+00 983.0
21 TraesCS6D01G347500 chr3D 87.879 726 67 13 2764 3477 136679421 136678705 0.000000e+00 833.0
22 TraesCS6D01G347500 chr2D 87.744 718 68 11 2773 3482 2555082 2555787 0.000000e+00 821.0
23 TraesCS6D01G347500 chr2D 83.112 829 126 12 1529 2350 337923676 337924497 0.000000e+00 743.0
24 TraesCS6D01G347500 chr2D 80.577 762 139 8 1603 2361 338331081 338330326 2.330000e-161 579.0
25 TraesCS6D01G347500 chr2D 81.352 488 79 11 1040 1521 337923090 337923571 1.520000e-103 387.0
26 TraesCS6D01G347500 chr2B 81.590 918 151 16 1529 2437 405262935 405263843 0.000000e+00 743.0
27 TraesCS6D01G347500 chr2B 77.988 845 150 25 1610 2433 481899947 481900776 6.710000e-137 497.0
28 TraesCS6D01G347500 chr2B 81.148 488 80 11 1040 1521 405262348 405262829 7.050000e-102 381.0
29 TraesCS6D01G347500 chr2A 82.816 838 130 12 1529 2359 448153739 448154569 0.000000e+00 737.0
30 TraesCS6D01G347500 chr2A 78.055 843 153 24 1610 2433 544332539 544333368 1.440000e-138 503.0
31 TraesCS6D01G347500 chr1B 79.268 574 99 16 1727 2293 90405972 90406532 1.960000e-102 383.0
32 TraesCS6D01G347500 chr1B 91.803 61 3 2 65 123 282043749 282043809 2.230000e-12 84.2
33 TraesCS6D01G347500 chr5A 79.551 445 79 12 1040 1478 529080995 529080557 1.210000e-79 307.0
34 TraesCS6D01G347500 chr5A 94.828 58 2 1 68 124 40817307 40817250 4.790000e-14 89.8
35 TraesCS6D01G347500 chr5A 78.571 126 22 5 1610 1731 468908001 468907877 1.040000e-10 78.7
36 TraesCS6D01G347500 chr5A 90.000 60 5 1 65 123 534122498 534122557 3.730000e-10 76.8
37 TraesCS6D01G347500 chr5B 79.418 447 76 15 1040 1478 503116618 503116180 5.650000e-78 302.0
38 TraesCS6D01G347500 chr5B 76.149 457 101 7 1040 1492 611868539 611868991 2.090000e-57 233.0
39 TraesCS6D01G347500 chr5D 74.478 431 100 10 1066 1491 495290556 495290981 9.930000e-41 178.0
40 TraesCS6D01G347500 chr4A 98.148 54 1 0 70 123 691268792 691268845 1.030000e-15 95.3
41 TraesCS6D01G347500 chr7A 98.077 52 1 0 72 123 74932224 74932173 1.330000e-14 91.6
42 TraesCS6D01G347500 chr7A 93.103 58 2 2 66 121 114675498 114675441 2.230000e-12 84.2
43 TraesCS6D01G347500 chrUn 93.443 61 2 2 69 127 399069839 399069899 4.790000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G347500 chr6D 446101844 446105325 3481 False 6431.00 6431 100.0000 1 3482 1 chr6D.!!$F2 3481
1 TraesCS6D01G347500 chr6D 231961349 231962115 766 True 915.00 915 88.4020 2715 3477 1 chr6D.!!$R1 762
2 TraesCS6D01G347500 chr6D 272164876 272165645 769 False 889.00 889 87.5960 2703 3477 1 chr6D.!!$F1 774
3 TraesCS6D01G347500 chr6B 674326704 674328827 2123 False 1529.50 2575 91.8335 390 2570 2 chr6B.!!$F2 2180
4 TraesCS6D01G347500 chr6A 592812669 592818995 6326 True 1045.02 2246 89.7682 400 2609 5 chr6A.!!$R1 2209
5 TraesCS6D01G347500 chr1D 272993868 272994674 806 True 1160.00 1160 92.6980 2675 3477 1 chr1D.!!$R1 802
6 TraesCS6D01G347500 chr7D 502855324 502856089 765 False 1002.00 1002 90.4760 2714 3476 1 chr7D.!!$F3 762
7 TraesCS6D01G347500 chr7D 557216071 557216749 678 True 965.00 965 92.2400 2800 3482 1 chr7D.!!$R2 682
8 TraesCS6D01G347500 chr7D 220481517 220482278 761 False 942.00 942 89.1190 2714 3476 1 chr7D.!!$F1 762
9 TraesCS6D01G347500 chr7D 494826238 494827008 770 False 922.00 922 88.4170 2714 3481 1 chr7D.!!$F2 767
10 TraesCS6D01G347500 chr4D 127120763 127121551 788 True 1000.00 1000 89.6730 2693 3477 1 chr4D.!!$R1 784
11 TraesCS6D01G347500 chr4D 127143325 127144113 788 True 983.00 983 89.3220 2693 3477 1 chr4D.!!$R2 784
12 TraesCS6D01G347500 chr3D 136678705 136679421 716 True 833.00 833 87.8790 2764 3477 1 chr3D.!!$R1 713
13 TraesCS6D01G347500 chr2D 2555082 2555787 705 False 821.00 821 87.7440 2773 3482 1 chr2D.!!$F1 709
14 TraesCS6D01G347500 chr2D 338330326 338331081 755 True 579.00 579 80.5770 1603 2361 1 chr2D.!!$R1 758
15 TraesCS6D01G347500 chr2D 337923090 337924497 1407 False 565.00 743 82.2320 1040 2350 2 chr2D.!!$F2 1310
16 TraesCS6D01G347500 chr2B 405262348 405263843 1495 False 562.00 743 81.3690 1040 2437 2 chr2B.!!$F2 1397
17 TraesCS6D01G347500 chr2B 481899947 481900776 829 False 497.00 497 77.9880 1610 2433 1 chr2B.!!$F1 823
18 TraesCS6D01G347500 chr2A 448153739 448154569 830 False 737.00 737 82.8160 1529 2359 1 chr2A.!!$F1 830
19 TraesCS6D01G347500 chr2A 544332539 544333368 829 False 503.00 503 78.0550 1610 2433 1 chr2A.!!$F2 823
20 TraesCS6D01G347500 chr1B 90405972 90406532 560 False 383.00 383 79.2680 1727 2293 1 chr1B.!!$F1 566

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
228 229 0.027716 GACGAGCAATGCAGCAGATG 59.972 55.0 8.35 3.79 36.85 2.9 F
359 360 0.033228 GAGACCGGGCATCAGATCTG 59.967 60.0 17.07 17.07 0.00 2.9 F
902 937 0.106708 TGTTGGTCAGTCAGTGCTCC 59.893 55.0 0.00 0.00 0.00 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1284 1321 3.127533 GTCATGGTGGAGCGGCAC 61.128 66.667 1.45 0.00 0.0 5.01 R
2315 2462 0.979665 CATGGCCTCCCGTATCATCT 59.020 55.000 3.32 0.00 0.0 2.90 R
2497 6820 0.109458 TCGAAATCAGGGACGTCACG 60.109 55.000 18.91 10.53 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.650950 GGCACCCTCCCAGAGCAA 61.651 66.667 0.00 0.00 0.00 3.91
19 20 2.360475 GCACCCTCCCAGAGCAAC 60.360 66.667 0.00 0.00 0.00 4.17
20 21 3.160585 CACCCTCCCAGAGCAACA 58.839 61.111 0.00 0.00 0.00 3.33
21 22 1.455849 CACCCTCCCAGAGCAACAA 59.544 57.895 0.00 0.00 0.00 2.83
22 23 0.178992 CACCCTCCCAGAGCAACAAA 60.179 55.000 0.00 0.00 0.00 2.83
23 24 0.779997 ACCCTCCCAGAGCAACAAAT 59.220 50.000 0.00 0.00 0.00 2.32
24 25 1.180029 CCCTCCCAGAGCAACAAATG 58.820 55.000 0.00 0.00 0.00 2.32
25 26 1.180029 CCTCCCAGAGCAACAAATGG 58.820 55.000 0.00 0.00 0.00 3.16
27 28 3.056213 CCCAGAGCAACAAATGGGT 57.944 52.632 0.76 0.00 46.19 4.51
28 29 0.604578 CCCAGAGCAACAAATGGGTG 59.395 55.000 0.76 0.00 46.19 4.61
29 30 1.619654 CCAGAGCAACAAATGGGTGA 58.380 50.000 0.00 0.00 0.00 4.02
30 31 2.173519 CCAGAGCAACAAATGGGTGAT 58.826 47.619 0.00 0.00 0.00 3.06
31 32 2.165030 CCAGAGCAACAAATGGGTGATC 59.835 50.000 0.00 0.00 0.00 2.92
32 33 2.821378 CAGAGCAACAAATGGGTGATCA 59.179 45.455 0.00 0.00 0.00 2.92
33 34 3.256383 CAGAGCAACAAATGGGTGATCAA 59.744 43.478 0.00 0.00 0.00 2.57
34 35 3.256631 AGAGCAACAAATGGGTGATCAAC 59.743 43.478 0.73 0.73 0.00 3.18
35 36 2.964464 AGCAACAAATGGGTGATCAACA 59.036 40.909 13.90 8.46 0.00 3.33
36 37 3.387374 AGCAACAAATGGGTGATCAACAA 59.613 39.130 13.90 0.11 0.00 2.83
37 38 4.125703 GCAACAAATGGGTGATCAACAAA 58.874 39.130 13.90 0.00 0.00 2.83
38 39 4.211794 GCAACAAATGGGTGATCAACAAAG 59.788 41.667 13.90 0.00 0.00 2.77
39 40 3.993920 ACAAATGGGTGATCAACAAAGC 58.006 40.909 13.90 0.00 0.00 3.51
40 41 3.387374 ACAAATGGGTGATCAACAAAGCA 59.613 39.130 13.90 1.05 0.00 3.91
41 42 4.141756 ACAAATGGGTGATCAACAAAGCAA 60.142 37.500 13.90 0.00 0.00 3.91
42 43 4.686191 AATGGGTGATCAACAAAGCAAA 57.314 36.364 13.90 0.00 0.00 3.68
43 44 4.686191 ATGGGTGATCAACAAAGCAAAA 57.314 36.364 13.90 0.00 0.00 2.44
44 45 4.686191 TGGGTGATCAACAAAGCAAAAT 57.314 36.364 13.90 0.00 0.00 1.82
45 46 4.378774 TGGGTGATCAACAAAGCAAAATG 58.621 39.130 13.90 0.00 0.00 2.32
46 47 3.747529 GGGTGATCAACAAAGCAAAATGG 59.252 43.478 13.90 0.00 0.00 3.16
47 48 4.502950 GGGTGATCAACAAAGCAAAATGGA 60.503 41.667 13.90 0.00 0.00 3.41
48 49 4.448732 GGTGATCAACAAAGCAAAATGGAC 59.551 41.667 5.69 0.00 0.00 4.02
49 50 5.049167 GTGATCAACAAAGCAAAATGGACA 58.951 37.500 0.00 0.00 0.00 4.02
50 51 5.523188 GTGATCAACAAAGCAAAATGGACAA 59.477 36.000 0.00 0.00 0.00 3.18
51 52 6.036953 GTGATCAACAAAGCAAAATGGACAAA 59.963 34.615 0.00 0.00 0.00 2.83
52 53 6.596888 TGATCAACAAAGCAAAATGGACAAAA 59.403 30.769 0.00 0.00 0.00 2.44
53 54 6.998968 TCAACAAAGCAAAATGGACAAAAT 57.001 29.167 0.00 0.00 0.00 1.82
54 55 7.014092 TCAACAAAGCAAAATGGACAAAATC 57.986 32.000 0.00 0.00 0.00 2.17
55 56 6.822676 TCAACAAAGCAAAATGGACAAAATCT 59.177 30.769 0.00 0.00 0.00 2.40
56 57 6.607735 ACAAAGCAAAATGGACAAAATCTG 57.392 33.333 0.00 0.00 0.00 2.90
57 58 6.347696 ACAAAGCAAAATGGACAAAATCTGA 58.652 32.000 0.00 0.00 0.00 3.27
58 59 6.822676 ACAAAGCAAAATGGACAAAATCTGAA 59.177 30.769 0.00 0.00 0.00 3.02
59 60 7.011669 ACAAAGCAAAATGGACAAAATCTGAAG 59.988 33.333 0.00 0.00 0.00 3.02
60 61 5.544650 AGCAAAATGGACAAAATCTGAAGG 58.455 37.500 0.00 0.00 0.00 3.46
61 62 5.305128 AGCAAAATGGACAAAATCTGAAGGA 59.695 36.000 0.00 0.00 0.00 3.36
62 63 5.990996 GCAAAATGGACAAAATCTGAAGGAA 59.009 36.000 0.00 0.00 0.00 3.36
63 64 6.073602 GCAAAATGGACAAAATCTGAAGGAAC 60.074 38.462 0.00 0.00 0.00 3.62
98 99 5.898630 TTAAACGAAGGCAAAAGATTTGC 57.101 34.783 17.18 17.18 44.22 3.68
110 111 7.599630 GCAAAAGATTTGCCTCATTCATTAA 57.400 32.000 15.12 0.00 39.38 1.40
111 112 8.205131 GCAAAAGATTTGCCTCATTCATTAAT 57.795 30.769 15.12 0.00 39.38 1.40
112 113 8.671028 GCAAAAGATTTGCCTCATTCATTAATT 58.329 29.630 15.12 0.00 39.38 1.40
122 123 9.685276 TGCCTCATTCATTAATTAAGAAGAAGA 57.315 29.630 3.94 6.82 0.00 2.87
143 144 9.847224 AGAAGATAGAACAAAGTTTTAAGGTCA 57.153 29.630 0.00 0.00 0.00 4.02
146 147 8.936864 AGATAGAACAAAGTTTTAAGGTCATCG 58.063 33.333 0.00 0.00 0.00 3.84
147 148 8.842358 ATAGAACAAAGTTTTAAGGTCATCGA 57.158 30.769 0.00 0.00 0.00 3.59
148 149 6.956047 AGAACAAAGTTTTAAGGTCATCGAC 58.044 36.000 0.00 0.00 0.00 4.20
156 157 2.124695 GGTCATCGACCCAAGGCC 60.125 66.667 0.00 0.00 46.19 5.19
157 158 2.511600 GTCATCGACCCAAGGCCG 60.512 66.667 0.00 0.00 0.00 6.13
158 159 2.682136 TCATCGACCCAAGGCCGA 60.682 61.111 0.00 0.00 36.72 5.54
159 160 2.267642 CATCGACCCAAGGCCGAA 59.732 61.111 0.00 0.00 35.87 4.30
160 161 2.106683 CATCGACCCAAGGCCGAAC 61.107 63.158 0.00 0.00 35.87 3.95
161 162 2.589157 ATCGACCCAAGGCCGAACA 61.589 57.895 0.00 0.00 35.87 3.18
162 163 2.119484 ATCGACCCAAGGCCGAACAA 62.119 55.000 0.00 0.00 35.87 2.83
163 164 1.894756 CGACCCAAGGCCGAACAAA 60.895 57.895 0.00 0.00 0.00 2.83
164 165 1.852067 CGACCCAAGGCCGAACAAAG 61.852 60.000 0.00 0.00 0.00 2.77
165 166 0.822121 GACCCAAGGCCGAACAAAGT 60.822 55.000 0.00 0.00 0.00 2.66
166 167 0.396556 ACCCAAGGCCGAACAAAGTT 60.397 50.000 0.00 0.00 0.00 2.66
167 168 0.750249 CCCAAGGCCGAACAAAGTTT 59.250 50.000 0.00 0.00 0.00 2.66
168 169 1.138069 CCCAAGGCCGAACAAAGTTTT 59.862 47.619 0.00 0.00 0.00 2.43
169 170 2.362717 CCCAAGGCCGAACAAAGTTTTA 59.637 45.455 0.00 0.00 0.00 1.52
170 171 3.181474 CCCAAGGCCGAACAAAGTTTTAA 60.181 43.478 0.00 0.00 0.00 1.52
171 172 4.048504 CCAAGGCCGAACAAAGTTTTAAG 58.951 43.478 0.00 0.00 0.00 1.85
172 173 4.202070 CCAAGGCCGAACAAAGTTTTAAGA 60.202 41.667 0.00 0.00 0.00 2.10
173 174 4.830826 AGGCCGAACAAAGTTTTAAGAG 57.169 40.909 0.00 0.00 0.00 2.85
174 175 3.004419 AGGCCGAACAAAGTTTTAAGAGC 59.996 43.478 0.00 0.00 0.00 4.09
175 176 3.243267 GGCCGAACAAAGTTTTAAGAGCA 60.243 43.478 0.00 0.00 0.00 4.26
176 177 3.729217 GCCGAACAAAGTTTTAAGAGCAC 59.271 43.478 0.00 0.00 0.00 4.40
177 178 3.966218 CCGAACAAAGTTTTAAGAGCACG 59.034 43.478 0.00 0.00 0.00 5.34
178 179 4.260456 CCGAACAAAGTTTTAAGAGCACGA 60.260 41.667 0.00 0.00 0.00 4.35
179 180 4.664851 CGAACAAAGTTTTAAGAGCACGAC 59.335 41.667 0.00 0.00 0.00 4.34
180 181 5.501897 CGAACAAAGTTTTAAGAGCACGACT 60.502 40.000 0.00 0.00 0.00 4.18
181 182 5.156804 ACAAAGTTTTAAGAGCACGACTG 57.843 39.130 0.00 0.00 0.00 3.51
182 183 4.873827 ACAAAGTTTTAAGAGCACGACTGA 59.126 37.500 0.00 0.00 0.00 3.41
183 184 5.527582 ACAAAGTTTTAAGAGCACGACTGAT 59.472 36.000 0.00 0.00 0.00 2.90
184 185 5.847670 AAGTTTTAAGAGCACGACTGATC 57.152 39.130 0.00 0.00 32.55 2.92
185 186 5.140747 AGTTTTAAGAGCACGACTGATCT 57.859 39.130 0.00 0.00 45.38 2.75
186 187 4.926238 AGTTTTAAGAGCACGACTGATCTG 59.074 41.667 0.00 0.00 42.53 2.90
187 188 4.783764 TTTAAGAGCACGACTGATCTGA 57.216 40.909 6.60 0.00 42.53 3.27
188 189 4.783764 TTAAGAGCACGACTGATCTGAA 57.216 40.909 6.60 0.00 42.53 3.02
189 190 2.937469 AGAGCACGACTGATCTGAAG 57.063 50.000 6.60 2.51 41.75 3.02
190 191 1.476085 AGAGCACGACTGATCTGAAGG 59.524 52.381 6.60 0.00 41.75 3.46
191 192 1.474478 GAGCACGACTGATCTGAAGGA 59.526 52.381 6.60 0.00 29.54 3.36
192 193 1.895798 AGCACGACTGATCTGAAGGAA 59.104 47.619 6.60 0.00 0.00 3.36
193 194 1.996191 GCACGACTGATCTGAAGGAAC 59.004 52.381 6.60 0.00 0.00 3.62
194 195 6.404508 GAGCACGACTGATCTGAAGGAACT 62.405 50.000 6.60 0.00 31.65 3.01
195 196 7.794542 GAGCACGACTGATCTGAAGGAACTT 62.795 48.000 6.60 0.00 39.82 2.66
209 210 4.843220 AGGAACTTCTTGTGAAATGCTG 57.157 40.909 0.00 0.00 27.25 4.41
210 211 4.464008 AGGAACTTCTTGTGAAATGCTGA 58.536 39.130 0.00 0.00 27.25 4.26
211 212 4.276926 AGGAACTTCTTGTGAAATGCTGAC 59.723 41.667 0.00 0.00 27.25 3.51
212 213 3.885484 ACTTCTTGTGAAATGCTGACG 57.115 42.857 0.00 0.00 0.00 4.35
213 214 3.466836 ACTTCTTGTGAAATGCTGACGA 58.533 40.909 0.00 0.00 0.00 4.20
214 215 3.496130 ACTTCTTGTGAAATGCTGACGAG 59.504 43.478 0.00 0.00 0.00 4.18
215 216 1.800586 TCTTGTGAAATGCTGACGAGC 59.199 47.619 0.00 0.00 46.44 5.03
223 224 2.099831 GCTGACGAGCAATGCAGC 59.900 61.111 8.35 3.03 45.46 5.25
224 225 3.569902 CTGACGAGCAATGCAGCA 58.430 55.556 8.35 0.00 36.85 4.41
225 226 1.424240 CTGACGAGCAATGCAGCAG 59.576 57.895 8.35 8.92 36.85 4.24
226 227 1.004679 TGACGAGCAATGCAGCAGA 60.005 52.632 8.35 0.00 36.85 4.26
227 228 0.392060 TGACGAGCAATGCAGCAGAT 60.392 50.000 8.35 0.00 36.85 2.90
228 229 0.027716 GACGAGCAATGCAGCAGATG 59.972 55.000 8.35 3.79 36.85 2.90
237 238 3.132139 CAGCAGATGCAAGCGCCT 61.132 61.111 2.29 0.00 45.16 5.52
238 239 3.132139 AGCAGATGCAAGCGCCTG 61.132 61.111 2.29 1.24 45.16 4.85
239 240 3.437795 GCAGATGCAAGCGCCTGT 61.438 61.111 2.29 0.00 41.59 4.00
240 241 2.789917 CAGATGCAAGCGCCTGTC 59.210 61.111 2.29 0.00 37.32 3.51
241 242 2.036571 CAGATGCAAGCGCCTGTCA 61.037 57.895 2.29 4.54 37.32 3.58
242 243 1.302752 AGATGCAAGCGCCTGTCAA 60.303 52.632 2.29 0.00 37.32 3.18
243 244 0.679002 AGATGCAAGCGCCTGTCAAT 60.679 50.000 2.29 0.00 37.32 2.57
244 245 0.171903 GATGCAAGCGCCTGTCAATT 59.828 50.000 2.29 0.00 37.32 2.32
245 246 0.108992 ATGCAAGCGCCTGTCAATTG 60.109 50.000 2.29 0.00 37.32 2.32
246 247 1.444895 GCAAGCGCCTGTCAATTGG 60.445 57.895 2.29 0.00 0.00 3.16
247 248 1.865788 GCAAGCGCCTGTCAATTGGA 61.866 55.000 2.29 0.00 0.00 3.53
248 249 0.169672 CAAGCGCCTGTCAATTGGAG 59.830 55.000 2.29 2.13 0.00 3.86
249 250 0.036732 AAGCGCCTGTCAATTGGAGA 59.963 50.000 2.29 0.00 0.00 3.71
250 251 0.036732 AGCGCCTGTCAATTGGAGAA 59.963 50.000 2.29 0.00 0.00 2.87
251 252 0.881118 GCGCCTGTCAATTGGAGAAA 59.119 50.000 5.42 0.00 0.00 2.52
252 253 1.269448 GCGCCTGTCAATTGGAGAAAA 59.731 47.619 5.42 0.00 0.00 2.29
253 254 2.288152 GCGCCTGTCAATTGGAGAAAAA 60.288 45.455 5.42 0.00 0.00 1.94
270 271 2.341911 AAAAATGTTGCCCGCCCG 59.658 55.556 0.00 0.00 0.00 6.13
271 272 2.203771 AAAAATGTTGCCCGCCCGA 61.204 52.632 0.00 0.00 0.00 5.14
272 273 2.153547 AAAAATGTTGCCCGCCCGAG 62.154 55.000 0.00 0.00 0.00 4.63
273 274 3.561120 AAATGTTGCCCGCCCGAGA 62.561 57.895 0.00 0.00 0.00 4.04
274 275 3.976701 AATGTTGCCCGCCCGAGAG 62.977 63.158 0.00 0.00 0.00 3.20
285 286 2.272797 CCGAGAGTCCGGGAGTCT 59.727 66.667 29.96 29.96 44.03 3.24
286 287 1.378778 CCGAGAGTCCGGGAGTCTT 60.379 63.158 30.06 16.94 41.76 3.01
287 288 1.658686 CCGAGAGTCCGGGAGTCTTG 61.659 65.000 30.65 30.65 41.76 3.02
288 289 0.677098 CGAGAGTCCGGGAGTCTTGA 60.677 60.000 32.72 0.00 42.92 3.02
289 290 1.770294 GAGAGTCCGGGAGTCTTGAT 58.230 55.000 30.06 12.62 41.76 2.57
290 291 1.407258 GAGAGTCCGGGAGTCTTGATG 59.593 57.143 30.06 0.00 41.76 3.07
291 292 0.461961 GAGTCCGGGAGTCTTGATGG 59.538 60.000 22.07 0.00 0.00 3.51
292 293 1.153349 GTCCGGGAGTCTTGATGGC 60.153 63.158 0.00 0.00 0.00 4.40
293 294 2.190578 CCGGGAGTCTTGATGGCC 59.809 66.667 0.00 0.00 0.00 5.36
294 295 2.370445 CCGGGAGTCTTGATGGCCT 61.370 63.158 3.32 0.00 0.00 5.19
295 296 1.144936 CGGGAGTCTTGATGGCCTC 59.855 63.158 3.32 0.00 0.00 4.70
296 297 1.333636 CGGGAGTCTTGATGGCCTCT 61.334 60.000 3.32 0.00 0.00 3.69
297 298 0.179936 GGGAGTCTTGATGGCCTCTG 59.820 60.000 3.32 0.00 0.00 3.35
298 299 1.198713 GGAGTCTTGATGGCCTCTGA 58.801 55.000 3.32 0.00 0.00 3.27
299 300 1.767681 GGAGTCTTGATGGCCTCTGAT 59.232 52.381 3.32 0.00 0.00 2.90
300 301 2.172293 GGAGTCTTGATGGCCTCTGATT 59.828 50.000 3.32 0.00 0.00 2.57
301 302 3.204526 GAGTCTTGATGGCCTCTGATTG 58.795 50.000 3.32 0.00 0.00 2.67
302 303 1.674962 GTCTTGATGGCCTCTGATTGC 59.325 52.381 3.32 0.00 0.00 3.56
303 304 1.282738 TCTTGATGGCCTCTGATTGCA 59.717 47.619 3.32 0.00 0.00 4.08
304 305 2.092049 TCTTGATGGCCTCTGATTGCAT 60.092 45.455 3.32 0.00 0.00 3.96
305 306 2.447408 TGATGGCCTCTGATTGCATT 57.553 45.000 3.32 0.00 0.00 3.56
306 307 2.028876 TGATGGCCTCTGATTGCATTG 58.971 47.619 3.32 0.00 0.00 2.82
307 308 1.340248 GATGGCCTCTGATTGCATTGG 59.660 52.381 3.32 0.00 0.00 3.16
308 309 0.685131 TGGCCTCTGATTGCATTGGG 60.685 55.000 3.32 0.00 0.00 4.12
309 310 1.440476 GCCTCTGATTGCATTGGGC 59.560 57.895 0.00 0.00 45.13 5.36
310 311 2.024590 GCCTCTGATTGCATTGGGCC 62.025 60.000 0.00 0.00 43.89 5.80
311 312 0.396695 CCTCTGATTGCATTGGGCCT 60.397 55.000 4.53 0.00 43.89 5.19
312 313 0.744874 CTCTGATTGCATTGGGCCTG 59.255 55.000 4.53 0.00 43.89 4.85
313 314 0.685131 TCTGATTGCATTGGGCCTGG 60.685 55.000 4.53 0.00 43.89 4.45
314 315 1.682451 CTGATTGCATTGGGCCTGGG 61.682 60.000 4.53 0.00 43.89 4.45
315 316 1.686800 GATTGCATTGGGCCTGGGT 60.687 57.895 4.53 0.00 43.89 4.51
316 317 1.229593 ATTGCATTGGGCCTGGGTT 60.230 52.632 4.53 0.00 43.89 4.11
317 318 1.555477 ATTGCATTGGGCCTGGGTTG 61.555 55.000 4.53 0.00 43.89 3.77
318 319 2.283821 GCATTGGGCCTGGGTTGA 60.284 61.111 4.53 0.00 36.11 3.18
319 320 1.912763 GCATTGGGCCTGGGTTGAA 60.913 57.895 4.53 0.00 36.11 2.69
320 321 1.266867 GCATTGGGCCTGGGTTGAAT 61.267 55.000 4.53 0.00 36.11 2.57
321 322 0.538118 CATTGGGCCTGGGTTGAATG 59.462 55.000 4.53 0.07 0.00 2.67
322 323 0.618393 ATTGGGCCTGGGTTGAATGG 60.618 55.000 4.53 0.00 0.00 3.16
323 324 1.734420 TTGGGCCTGGGTTGAATGGA 61.734 55.000 4.53 0.00 0.00 3.41
324 325 1.380380 GGGCCTGGGTTGAATGGAG 60.380 63.158 0.84 0.00 0.00 3.86
325 326 2.054453 GGCCTGGGTTGAATGGAGC 61.054 63.158 0.00 0.00 0.00 4.70
326 327 1.304381 GCCTGGGTTGAATGGAGCA 60.304 57.895 0.00 0.00 0.00 4.26
327 328 0.899717 GCCTGGGTTGAATGGAGCAA 60.900 55.000 0.00 0.00 0.00 3.91
328 329 1.856629 CCTGGGTTGAATGGAGCAAT 58.143 50.000 0.00 0.00 0.00 3.56
329 330 1.479323 CCTGGGTTGAATGGAGCAATG 59.521 52.381 0.00 0.00 0.00 2.82
330 331 0.896923 TGGGTTGAATGGAGCAATGC 59.103 50.000 0.00 0.00 0.00 3.56
331 332 0.176449 GGGTTGAATGGAGCAATGCC 59.824 55.000 0.00 0.00 0.00 4.40
332 333 0.176449 GGTTGAATGGAGCAATGCCC 59.824 55.000 0.00 3.51 0.00 5.36
333 334 0.176449 GTTGAATGGAGCAATGCCCC 59.824 55.000 0.00 0.00 0.00 5.80
334 335 1.321805 TTGAATGGAGCAATGCCCCG 61.322 55.000 0.00 0.00 0.00 5.73
335 336 1.453745 GAATGGAGCAATGCCCCGA 60.454 57.895 0.00 0.00 0.00 5.14
336 337 1.450531 GAATGGAGCAATGCCCCGAG 61.451 60.000 0.00 0.00 0.00 4.63
337 338 1.925285 AATGGAGCAATGCCCCGAGA 61.925 55.000 0.00 0.00 0.00 4.04
338 339 2.514824 GGAGCAATGCCCCGAGAC 60.515 66.667 0.00 0.00 0.00 3.36
339 340 2.514824 GAGCAATGCCCCGAGACC 60.515 66.667 0.00 0.00 0.00 3.85
340 341 4.473520 AGCAATGCCCCGAGACCG 62.474 66.667 0.00 0.00 0.00 4.79
341 342 4.467084 GCAATGCCCCGAGACCGA 62.467 66.667 0.00 0.00 38.22 4.69
342 343 2.202932 CAATGCCCCGAGACCGAG 60.203 66.667 0.00 0.00 38.22 4.63
343 344 2.363795 AATGCCCCGAGACCGAGA 60.364 61.111 0.00 0.00 38.22 4.04
344 345 2.722201 AATGCCCCGAGACCGAGAC 61.722 63.158 0.00 0.00 38.22 3.36
356 357 3.133014 CGAGACCGGGCATCAGAT 58.867 61.111 11.69 0.00 0.00 2.90
357 358 1.006805 CGAGACCGGGCATCAGATC 60.007 63.158 11.69 0.00 0.00 2.75
358 359 1.459455 CGAGACCGGGCATCAGATCT 61.459 60.000 11.69 0.00 0.00 2.75
359 360 0.033228 GAGACCGGGCATCAGATCTG 59.967 60.000 17.07 17.07 0.00 2.90
360 361 1.596477 GACCGGGCATCAGATCTGC 60.596 63.158 18.36 7.38 38.93 4.26
365 366 4.842292 GCATCAGATCTGCCGTGA 57.158 55.556 18.36 0.50 33.44 4.35
366 367 3.302375 GCATCAGATCTGCCGTGAT 57.698 52.632 18.36 3.15 33.44 3.06
367 368 1.590932 GCATCAGATCTGCCGTGATT 58.409 50.000 18.36 0.00 33.44 2.57
368 369 2.759191 GCATCAGATCTGCCGTGATTA 58.241 47.619 18.36 0.00 33.44 1.75
369 370 3.133691 GCATCAGATCTGCCGTGATTAA 58.866 45.455 18.36 0.00 33.44 1.40
370 371 3.561310 GCATCAGATCTGCCGTGATTAAA 59.439 43.478 18.36 0.00 33.44 1.52
371 372 4.035558 GCATCAGATCTGCCGTGATTAAAA 59.964 41.667 18.36 0.00 33.44 1.52
372 373 5.449041 GCATCAGATCTGCCGTGATTAAAAA 60.449 40.000 18.36 0.00 33.44 1.94
373 374 6.732154 CATCAGATCTGCCGTGATTAAAAAT 58.268 36.000 18.36 0.00 0.00 1.82
374 375 6.757897 TCAGATCTGCCGTGATTAAAAATT 57.242 33.333 18.36 0.00 0.00 1.82
375 376 7.156876 TCAGATCTGCCGTGATTAAAAATTT 57.843 32.000 18.36 0.00 0.00 1.82
376 377 7.028962 TCAGATCTGCCGTGATTAAAAATTTG 58.971 34.615 18.36 0.00 0.00 2.32
377 378 7.028962 CAGATCTGCCGTGATTAAAAATTTGA 58.971 34.615 10.38 0.00 0.00 2.69
378 379 7.703621 CAGATCTGCCGTGATTAAAAATTTGAT 59.296 33.333 10.38 0.00 0.00 2.57
379 380 7.703621 AGATCTGCCGTGATTAAAAATTTGATG 59.296 33.333 0.00 0.00 0.00 3.07
380 381 6.686630 TCTGCCGTGATTAAAAATTTGATGT 58.313 32.000 0.00 0.00 0.00 3.06
381 382 6.806249 TCTGCCGTGATTAAAAATTTGATGTC 59.194 34.615 0.00 0.00 0.00 3.06
382 383 6.450545 TGCCGTGATTAAAAATTTGATGTCA 58.549 32.000 0.00 0.00 0.00 3.58
383 384 6.585702 TGCCGTGATTAAAAATTTGATGTCAG 59.414 34.615 0.00 0.00 0.00 3.51
384 385 6.454186 GCCGTGATTAAAAATTTGATGTCAGC 60.454 38.462 0.00 0.00 0.00 4.26
385 386 6.034898 CCGTGATTAAAAATTTGATGTCAGCC 59.965 38.462 0.00 0.00 0.00 4.85
386 387 6.034898 CGTGATTAAAAATTTGATGTCAGCCC 59.965 38.462 0.00 0.00 0.00 5.19
387 388 7.099120 GTGATTAAAAATTTGATGTCAGCCCT 58.901 34.615 0.00 0.00 0.00 5.19
388 389 7.063780 GTGATTAAAAATTTGATGTCAGCCCTG 59.936 37.037 0.00 0.00 0.00 4.45
392 393 0.323302 TTTGATGTCAGCCCTGCGTA 59.677 50.000 0.00 0.00 0.00 4.42
394 395 1.218047 GATGTCAGCCCTGCGTACA 59.782 57.895 0.00 0.00 34.01 2.90
410 411 3.731717 GCGTACATACAGAGCTAAGCTTC 59.268 47.826 0.00 0.00 39.88 3.86
435 437 2.260434 CCATGTGCCTTGCAGTGC 59.740 61.111 8.58 8.58 40.08 4.40
439 441 2.666190 GTGCCTTGCAGTGCGAGA 60.666 61.111 30.49 11.51 42.27 4.04
453 455 4.033702 CAGTGCGAGACGATTACTGTACTA 59.966 45.833 0.00 0.00 33.62 1.82
454 456 4.033817 AGTGCGAGACGATTACTGTACTAC 59.966 45.833 0.00 0.00 0.00 2.73
455 457 3.934579 TGCGAGACGATTACTGTACTACA 59.065 43.478 0.00 0.00 0.00 2.74
457 459 4.962751 GCGAGACGATTACTGTACTACAAG 59.037 45.833 0.00 0.00 0.00 3.16
458 460 5.447010 GCGAGACGATTACTGTACTACAAGT 60.447 44.000 0.00 0.00 0.00 3.16
462 471 5.166398 ACGATTACTGTACTACAAGTTGCC 58.834 41.667 1.81 0.00 0.00 4.52
528 546 1.669115 CATGGGCACGGATCCGATC 60.669 63.158 39.55 27.18 42.83 3.69
634 656 3.423154 CGCTTCGTGCCCCAAGAC 61.423 66.667 0.00 0.00 38.78 3.01
659 681 0.542702 AGCCCAACACCCAATCAAGG 60.543 55.000 0.00 0.00 0.00 3.61
680 702 7.598493 TCAAGGTTTTGTTTTCTCAAGAAACAG 59.402 33.333 4.71 0.00 37.14 3.16
704 726 2.597217 TCAACTTTGCCTGCCGGG 60.597 61.111 2.18 0.00 38.36 5.73
762 789 2.778659 GCATCACAAGCGATTCAAGAC 58.221 47.619 0.00 0.00 0.00 3.01
782 809 7.982371 AAGACGAACTTGTTAAGTATATCCG 57.018 36.000 0.00 0.00 41.91 4.18
784 811 5.045872 ACGAACTTGTTAAGTATATCCGGC 58.954 41.667 0.00 0.00 41.91 6.13
785 812 4.147653 CGAACTTGTTAAGTATATCCGGCG 59.852 45.833 0.00 0.00 41.91 6.46
787 814 4.614946 ACTTGTTAAGTATATCCGGCGTC 58.385 43.478 6.01 0.00 40.69 5.19
789 816 5.532406 ACTTGTTAAGTATATCCGGCGTCTA 59.468 40.000 6.01 0.00 40.69 2.59
790 817 6.208204 ACTTGTTAAGTATATCCGGCGTCTAT 59.792 38.462 6.01 4.94 40.69 1.98
793 820 8.109705 TGTTAAGTATATCCGGCGTCTATAAA 57.890 34.615 6.01 0.00 0.00 1.40
794 821 8.023128 TGTTAAGTATATCCGGCGTCTATAAAC 58.977 37.037 6.01 8.56 0.00 2.01
795 822 6.830873 AAGTATATCCGGCGTCTATAAACT 57.169 37.500 6.01 1.36 0.00 2.66
796 823 7.928307 AAGTATATCCGGCGTCTATAAACTA 57.072 36.000 6.01 0.00 0.00 2.24
797 824 8.517062 AAGTATATCCGGCGTCTATAAACTAT 57.483 34.615 6.01 0.00 0.00 2.12
798 825 8.517062 AGTATATCCGGCGTCTATAAACTATT 57.483 34.615 6.01 0.00 0.00 1.73
799 826 8.619546 AGTATATCCGGCGTCTATAAACTATTC 58.380 37.037 6.01 0.00 0.00 1.75
800 827 5.717078 ATCCGGCGTCTATAAACTATTCA 57.283 39.130 6.01 0.00 0.00 2.57
801 828 5.518848 TCCGGCGTCTATAAACTATTCAA 57.481 39.130 6.01 0.00 0.00 2.69
802 829 5.284079 TCCGGCGTCTATAAACTATTCAAC 58.716 41.667 6.01 0.00 0.00 3.18
803 830 4.147653 CCGGCGTCTATAAACTATTCAACG 59.852 45.833 6.01 0.00 0.00 4.10
804 831 4.147653 CGGCGTCTATAAACTATTCAACGG 59.852 45.833 0.00 0.00 0.00 4.44
820 847 1.080093 CGGACGGTTGAGCTTAGCA 60.080 57.895 7.07 0.00 0.00 3.49
841 868 4.020128 GCAGCCCCTATAACTAAGTATGCT 60.020 45.833 0.00 0.00 0.00 3.79
874 909 0.324614 TTCACATCACTGCCACGGAT 59.675 50.000 0.00 0.00 0.00 4.18
875 910 0.108186 TCACATCACTGCCACGGATC 60.108 55.000 0.00 0.00 0.00 3.36
876 911 0.391528 CACATCACTGCCACGGATCA 60.392 55.000 0.00 0.00 0.00 2.92
877 912 0.107993 ACATCACTGCCACGGATCAG 60.108 55.000 0.00 0.00 36.45 2.90
878 913 1.153289 ATCACTGCCACGGATCAGC 60.153 57.895 0.00 0.00 33.80 4.26
879 914 2.913054 ATCACTGCCACGGATCAGCG 62.913 60.000 0.00 0.00 33.80 5.18
880 915 4.457496 ACTGCCACGGATCAGCGG 62.457 66.667 0.00 0.00 38.87 5.52
885 920 4.457496 CACGGATCAGCGGGCTGT 62.457 66.667 19.21 7.84 43.96 4.40
886 921 3.706373 ACGGATCAGCGGGCTGTT 61.706 61.111 19.21 11.90 43.96 3.16
887 922 3.197790 CGGATCAGCGGGCTGTTG 61.198 66.667 19.21 3.45 43.96 3.33
888 923 2.825836 GGATCAGCGGGCTGTTGG 60.826 66.667 19.21 0.00 43.96 3.77
889 924 2.045926 GATCAGCGGGCTGTTGGT 60.046 61.111 19.21 2.35 43.96 3.67
890 925 2.045926 ATCAGCGGGCTGTTGGTC 60.046 61.111 19.21 0.00 43.96 4.02
891 926 2.803155 GATCAGCGGGCTGTTGGTCA 62.803 60.000 17.39 0.44 43.96 4.02
892 927 2.809861 ATCAGCGGGCTGTTGGTCAG 62.810 60.000 19.21 0.00 46.12 3.51
893 928 3.560251 AGCGGGCTGTTGGTCAGT 61.560 61.111 0.00 0.00 45.23 3.41
894 929 3.050275 GCGGGCTGTTGGTCAGTC 61.050 66.667 0.00 0.00 46.91 3.51
898 933 2.621763 GGCTGTTGGTCAGTCAGTG 58.378 57.895 0.00 0.00 46.85 3.66
899 934 1.510480 GGCTGTTGGTCAGTCAGTGC 61.510 60.000 0.00 0.00 46.85 4.40
900 935 0.533755 GCTGTTGGTCAGTCAGTGCT 60.534 55.000 0.00 0.00 45.23 4.40
901 936 1.506493 CTGTTGGTCAGTCAGTGCTC 58.494 55.000 0.00 0.00 39.17 4.26
902 937 0.106708 TGTTGGTCAGTCAGTGCTCC 59.893 55.000 0.00 0.00 0.00 4.70
903 938 0.394565 GTTGGTCAGTCAGTGCTCCT 59.605 55.000 0.00 0.00 0.00 3.69
904 939 1.618837 GTTGGTCAGTCAGTGCTCCTA 59.381 52.381 0.00 0.00 0.00 2.94
905 940 1.257743 TGGTCAGTCAGTGCTCCTAC 58.742 55.000 0.00 0.00 0.00 3.18
906 941 1.257743 GGTCAGTCAGTGCTCCTACA 58.742 55.000 0.00 0.00 0.00 2.74
907 942 1.618837 GGTCAGTCAGTGCTCCTACAA 59.381 52.381 0.00 0.00 0.00 2.41
908 943 2.037251 GGTCAGTCAGTGCTCCTACAAA 59.963 50.000 0.00 0.00 0.00 2.83
909 944 3.307059 GGTCAGTCAGTGCTCCTACAAAT 60.307 47.826 0.00 0.00 0.00 2.32
910 945 4.319177 GTCAGTCAGTGCTCCTACAAATT 58.681 43.478 0.00 0.00 0.00 1.82
911 946 5.479306 GTCAGTCAGTGCTCCTACAAATTA 58.521 41.667 0.00 0.00 0.00 1.40
912 947 5.348997 GTCAGTCAGTGCTCCTACAAATTAC 59.651 44.000 0.00 0.00 0.00 1.89
913 948 5.011635 TCAGTCAGTGCTCCTACAAATTACA 59.988 40.000 0.00 0.00 0.00 2.41
927 962 6.727824 ACAAATTACAGTAGTTAGCAGCAG 57.272 37.500 0.00 0.00 0.00 4.24
928 963 5.122396 ACAAATTACAGTAGTTAGCAGCAGC 59.878 40.000 0.00 0.00 42.56 5.25
929 964 3.953712 TTACAGTAGTTAGCAGCAGCA 57.046 42.857 3.17 0.00 45.49 4.41
930 965 2.839486 ACAGTAGTTAGCAGCAGCAA 57.161 45.000 3.17 0.00 45.49 3.91
931 966 2.693069 ACAGTAGTTAGCAGCAGCAAG 58.307 47.619 3.17 0.00 45.49 4.01
932 967 2.037772 ACAGTAGTTAGCAGCAGCAAGT 59.962 45.455 3.17 1.72 45.49 3.16
933 968 2.670414 CAGTAGTTAGCAGCAGCAAGTC 59.330 50.000 3.17 0.00 45.49 3.01
934 969 2.564947 AGTAGTTAGCAGCAGCAAGTCT 59.435 45.455 3.17 0.00 45.49 3.24
962 997 3.740321 GCAGATAGTAGATCACTTGCTGC 59.260 47.826 21.36 21.36 46.54 5.25
963 998 5.199024 CAGATAGTAGATCACTTGCTGCT 57.801 43.478 0.00 0.00 38.80 4.24
979 1014 2.595536 GCTGCTGTGATTTATTTGTGCG 59.404 45.455 0.00 0.00 0.00 5.34
1002 1039 3.763414 ATCGAGTCGAGCGATCATG 57.237 52.632 21.36 0.00 44.39 3.07
1003 1040 0.239613 ATCGAGTCGAGCGATCATGG 59.760 55.000 21.36 0.00 44.39 3.66
1004 1041 2.013483 CGAGTCGAGCGATCATGGC 61.013 63.158 6.73 0.00 0.00 4.40
1038 1075 2.819595 GATCCGGCGCAGAAGCAA 60.820 61.111 10.83 0.00 42.27 3.91
1777 1924 4.828296 TCCTCCCGCCCGTCTACC 62.828 72.222 0.00 0.00 0.00 3.18
1875 2022 2.203788 TGGAAGGAGCAGGACGGT 60.204 61.111 0.00 0.00 0.00 4.83
2343 2490 3.493303 GAGGCCATGGAGGGGGAC 61.493 72.222 18.40 0.00 38.09 4.46
2425 6748 2.037367 CAGGTGGACCCTCGGAGA 59.963 66.667 6.58 0.00 43.86 3.71
2487 6810 1.270678 ACGGGTCAAGCCTGAAAGTAC 60.271 52.381 0.00 0.00 46.81 2.73
2488 6811 1.270625 CGGGTCAAGCCTGAAAGTACA 60.271 52.381 0.00 0.00 46.81 2.90
2495 6818 4.892934 TCAAGCCTGAAAGTACAAATTGGT 59.107 37.500 0.00 0.00 0.00 3.67
2496 6819 4.853924 AGCCTGAAAGTACAAATTGGTG 57.146 40.909 0.00 0.00 0.00 4.17
2497 6820 3.005791 AGCCTGAAAGTACAAATTGGTGC 59.994 43.478 0.00 0.00 0.00 5.01
2498 6821 3.564511 CCTGAAAGTACAAATTGGTGCG 58.435 45.455 0.00 0.00 0.00 5.34
2499 6822 3.004315 CCTGAAAGTACAAATTGGTGCGT 59.996 43.478 0.00 0.00 0.00 5.24
2510 6838 3.986006 GGTGCGTGACGTCCCTGA 61.986 66.667 14.12 0.00 0.00 3.86
2530 6858 5.454736 TGATTTCGATCGTGTTCTCATTG 57.545 39.130 15.94 0.00 0.00 2.82
2570 6898 2.536761 TTCGTCGGTTCTGAATTGGT 57.463 45.000 0.00 0.00 0.00 3.67
2571 6899 3.663995 TTCGTCGGTTCTGAATTGGTA 57.336 42.857 0.00 0.00 0.00 3.25
2572 6900 2.950433 TCGTCGGTTCTGAATTGGTAC 58.050 47.619 0.00 0.00 0.00 3.34
2573 6901 2.559668 TCGTCGGTTCTGAATTGGTACT 59.440 45.455 0.00 0.00 0.00 2.73
2574 6902 3.758023 TCGTCGGTTCTGAATTGGTACTA 59.242 43.478 0.00 0.00 0.00 1.82
2576 6904 5.105635 TCGTCGGTTCTGAATTGGTACTATT 60.106 40.000 0.00 0.00 0.00 1.73
2578 6906 6.455113 CGTCGGTTCTGAATTGGTACTATTTG 60.455 42.308 0.00 0.00 0.00 2.32
2579 6907 6.592607 GTCGGTTCTGAATTGGTACTATTTGA 59.407 38.462 0.00 0.00 0.00 2.69
2580 6908 7.280205 GTCGGTTCTGAATTGGTACTATTTGAT 59.720 37.037 0.00 0.00 0.00 2.57
2581 6909 7.279981 TCGGTTCTGAATTGGTACTATTTGATG 59.720 37.037 0.00 0.00 0.00 3.07
2582 6910 7.279981 CGGTTCTGAATTGGTACTATTTGATGA 59.720 37.037 0.00 0.00 0.00 2.92
2583 6911 9.125026 GGTTCTGAATTGGTACTATTTGATGAT 57.875 33.333 0.00 0.00 0.00 2.45
2602 6930 2.450867 TAGATGTGGAGAGCTGCTCT 57.549 50.000 30.85 30.85 44.28 4.09
2606 6934 0.534412 TGTGGAGAGCTGCTCTTAGC 59.466 55.000 30.90 22.30 41.35 3.09
2643 6971 4.507794 AAAAACTTGTAGCGCGCG 57.492 50.000 28.44 28.44 0.00 6.86
2644 6972 1.724581 AAAAACTTGTAGCGCGCGC 60.725 52.632 45.10 45.10 42.33 6.86
2654 6982 4.741781 GCGCGCGCATTGTTCTGT 62.742 61.111 46.11 0.00 41.49 3.41
2655 6983 2.127270 CGCGCGCATTGTTCTGTT 60.127 55.556 32.61 0.00 0.00 3.16
2656 6984 1.725625 CGCGCGCATTGTTCTGTTT 60.726 52.632 32.61 0.00 0.00 2.83
2657 6985 1.268113 CGCGCGCATTGTTCTGTTTT 61.268 50.000 32.61 0.00 0.00 2.43
2658 6986 0.159345 GCGCGCATTGTTCTGTTTTG 59.841 50.000 29.10 0.00 0.00 2.44
2659 6987 0.159345 CGCGCATTGTTCTGTTTTGC 59.841 50.000 8.75 0.00 0.00 3.68
2660 6988 1.490621 GCGCATTGTTCTGTTTTGCT 58.509 45.000 0.30 0.00 0.00 3.91
2661 6989 1.860326 GCGCATTGTTCTGTTTTGCTT 59.140 42.857 0.30 0.00 0.00 3.91
2662 6990 2.347846 GCGCATTGTTCTGTTTTGCTTG 60.348 45.455 0.30 0.00 0.00 4.01
2663 6991 2.859538 CGCATTGTTCTGTTTTGCTTGT 59.140 40.909 0.00 0.00 0.00 3.16
2664 6992 3.306703 CGCATTGTTCTGTTTTGCTTGTT 59.693 39.130 0.00 0.00 0.00 2.83
2665 6993 4.502282 CGCATTGTTCTGTTTTGCTTGTTA 59.498 37.500 0.00 0.00 0.00 2.41
2666 6994 5.554324 CGCATTGTTCTGTTTTGCTTGTTAC 60.554 40.000 0.00 0.00 0.00 2.50
2667 6995 5.554324 GCATTGTTCTGTTTTGCTTGTTACG 60.554 40.000 0.00 0.00 0.00 3.18
2668 6996 4.688511 TGTTCTGTTTTGCTTGTTACGT 57.311 36.364 0.00 0.00 0.00 3.57
2669 6997 5.798015 TGTTCTGTTTTGCTTGTTACGTA 57.202 34.783 0.00 0.00 0.00 3.57
2670 6998 6.179504 TGTTCTGTTTTGCTTGTTACGTAA 57.820 33.333 3.29 3.29 0.00 3.18
2671 6999 6.609533 TGTTCTGTTTTGCTTGTTACGTAAA 58.390 32.000 10.11 0.00 0.00 2.01
2672 7000 6.523893 TGTTCTGTTTTGCTTGTTACGTAAAC 59.476 34.615 10.11 4.51 38.67 2.01
2673 7001 6.179504 TCTGTTTTGCTTGTTACGTAAACA 57.820 33.333 10.11 9.00 46.41 2.83
2830 7181 1.066430 TCATCTCTCCCCGAAAAACCG 60.066 52.381 0.00 0.00 0.00 4.44
2905 7259 0.031585 ATATAGCTCCGTTTCGCGCA 59.968 50.000 8.75 0.00 39.71 6.09
2951 7305 8.446273 CGTCTCATGATACTCTTCATTTTGTTT 58.554 33.333 9.31 0.00 34.09 2.83
3021 7375 3.532892 CAAGAGTGCTAGTTGCTGTTG 57.467 47.619 0.00 0.00 43.37 3.33
3093 7447 4.436113 TTCTGTGCATCTTATGGGCATA 57.564 40.909 0.00 0.00 40.05 3.14
3135 7489 6.267242 TGTTGTATGCCATGCCATATTTACAT 59.733 34.615 0.00 0.00 31.01 2.29
3140 7494 5.392995 TGCCATGCCATATTTACATAGGTT 58.607 37.500 0.00 0.00 0.00 3.50
3177 7531 3.767711 TGTGATCTCTGTGGTGACTAGT 58.232 45.455 0.00 0.00 0.00 2.57
3263 7619 7.547227 AGTCTTTGTCTGCTGTTATTTTGTTT 58.453 30.769 0.00 0.00 0.00 2.83
3305 7661 7.821359 GCTACAGAGAGATCCATGCATATTTTA 59.179 37.037 0.00 0.00 0.00 1.52
3306 7662 9.716531 CTACAGAGAGATCCATGCATATTTTAA 57.283 33.333 0.00 0.00 0.00 1.52
3453 7809 6.551736 GGCAGATTGTTTACGTGTTATTCAT 58.448 36.000 0.00 0.00 0.00 2.57
3467 7823 8.132362 ACGTGTTATTCATTTTTGTCAAGCTTA 58.868 29.630 0.00 0.00 0.00 3.09
3477 7833 8.702438 CATTTTTGTCAAGCTTATTGTAGTTGG 58.298 33.333 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.619654 TCACCCATTTGTTGCTCTGG 58.380 50.000 0.00 0.00 0.00 3.86
11 12 2.821378 TGATCACCCATTTGTTGCTCTG 59.179 45.455 0.00 0.00 0.00 3.35
12 13 3.159213 TGATCACCCATTTGTTGCTCT 57.841 42.857 0.00 0.00 0.00 4.09
13 14 3.005684 TGTTGATCACCCATTTGTTGCTC 59.994 43.478 0.00 0.00 0.00 4.26
14 15 2.964464 TGTTGATCACCCATTTGTTGCT 59.036 40.909 0.00 0.00 0.00 3.91
15 16 3.383620 TGTTGATCACCCATTTGTTGC 57.616 42.857 0.00 0.00 0.00 4.17
16 17 4.211794 GCTTTGTTGATCACCCATTTGTTG 59.788 41.667 0.00 0.00 0.00 3.33
17 18 4.141756 TGCTTTGTTGATCACCCATTTGTT 60.142 37.500 0.00 0.00 0.00 2.83
18 19 3.387374 TGCTTTGTTGATCACCCATTTGT 59.613 39.130 0.00 0.00 0.00 2.83
19 20 3.992643 TGCTTTGTTGATCACCCATTTG 58.007 40.909 0.00 0.00 0.00 2.32
20 21 4.686191 TTGCTTTGTTGATCACCCATTT 57.314 36.364 0.00 0.00 0.00 2.32
21 22 4.686191 TTTGCTTTGTTGATCACCCATT 57.314 36.364 0.00 0.00 0.00 3.16
22 23 4.686191 TTTTGCTTTGTTGATCACCCAT 57.314 36.364 0.00 0.00 0.00 4.00
23 24 4.378774 CATTTTGCTTTGTTGATCACCCA 58.621 39.130 0.00 0.00 0.00 4.51
24 25 3.747529 CCATTTTGCTTTGTTGATCACCC 59.252 43.478 0.00 0.00 0.00 4.61
25 26 4.448732 GTCCATTTTGCTTTGTTGATCACC 59.551 41.667 0.00 0.00 0.00 4.02
26 27 5.049167 TGTCCATTTTGCTTTGTTGATCAC 58.951 37.500 0.00 0.00 0.00 3.06
27 28 5.273674 TGTCCATTTTGCTTTGTTGATCA 57.726 34.783 0.00 0.00 0.00 2.92
28 29 6.601741 TTTGTCCATTTTGCTTTGTTGATC 57.398 33.333 0.00 0.00 0.00 2.92
29 30 6.998968 TTTTGTCCATTTTGCTTTGTTGAT 57.001 29.167 0.00 0.00 0.00 2.57
30 31 6.822676 AGATTTTGTCCATTTTGCTTTGTTGA 59.177 30.769 0.00 0.00 0.00 3.18
31 32 6.908284 CAGATTTTGTCCATTTTGCTTTGTTG 59.092 34.615 0.00 0.00 0.00 3.33
32 33 6.822676 TCAGATTTTGTCCATTTTGCTTTGTT 59.177 30.769 0.00 0.00 0.00 2.83
33 34 6.347696 TCAGATTTTGTCCATTTTGCTTTGT 58.652 32.000 0.00 0.00 0.00 2.83
34 35 6.847956 TCAGATTTTGTCCATTTTGCTTTG 57.152 33.333 0.00 0.00 0.00 2.77
35 36 6.484308 CCTTCAGATTTTGTCCATTTTGCTTT 59.516 34.615 0.00 0.00 0.00 3.51
36 37 5.993441 CCTTCAGATTTTGTCCATTTTGCTT 59.007 36.000 0.00 0.00 0.00 3.91
37 38 5.305128 TCCTTCAGATTTTGTCCATTTTGCT 59.695 36.000 0.00 0.00 0.00 3.91
38 39 5.540911 TCCTTCAGATTTTGTCCATTTTGC 58.459 37.500 0.00 0.00 0.00 3.68
39 40 7.212274 AGTTCCTTCAGATTTTGTCCATTTTG 58.788 34.615 0.00 0.00 0.00 2.44
40 41 7.365497 AGTTCCTTCAGATTTTGTCCATTTT 57.635 32.000 0.00 0.00 0.00 1.82
41 42 6.983906 AGTTCCTTCAGATTTTGTCCATTT 57.016 33.333 0.00 0.00 0.00 2.32
42 43 6.779539 AGAAGTTCCTTCAGATTTTGTCCATT 59.220 34.615 0.00 0.00 42.37 3.16
43 44 6.310149 AGAAGTTCCTTCAGATTTTGTCCAT 58.690 36.000 0.00 0.00 42.37 3.41
44 45 5.694995 AGAAGTTCCTTCAGATTTTGTCCA 58.305 37.500 0.00 0.00 42.37 4.02
45 46 6.641169 AAGAAGTTCCTTCAGATTTTGTCC 57.359 37.500 0.00 0.00 42.37 4.02
46 47 8.932945 AAAAAGAAGTTCCTTCAGATTTTGTC 57.067 30.769 0.00 0.00 42.37 3.18
73 74 7.183433 GCAAATCTTTTGCCTTCGTTTAAAAA 58.817 30.769 12.74 0.00 39.38 1.94
74 75 6.710611 GCAAATCTTTTGCCTTCGTTTAAAA 58.289 32.000 12.74 0.00 39.38 1.52
75 76 6.280537 GCAAATCTTTTGCCTTCGTTTAAA 57.719 33.333 12.74 0.00 39.38 1.52
76 77 5.898630 GCAAATCTTTTGCCTTCGTTTAA 57.101 34.783 12.74 0.00 39.38 1.52
86 87 7.599630 TTAATGAATGAGGCAAATCTTTTGC 57.400 32.000 14.88 14.88 44.22 3.68
96 97 9.685276 TCTTCTTCTTAATTAATGAATGAGGCA 57.315 29.630 0.00 0.00 0.00 4.75
117 118 9.847224 TGACCTTAAAACTTTGTTCTATCTTCT 57.153 29.630 0.00 0.00 0.00 2.85
120 121 8.936864 CGATGACCTTAAAACTTTGTTCTATCT 58.063 33.333 0.00 0.00 0.00 1.98
121 122 8.932791 TCGATGACCTTAAAACTTTGTTCTATC 58.067 33.333 0.00 0.00 0.00 2.08
122 123 8.718734 GTCGATGACCTTAAAACTTTGTTCTAT 58.281 33.333 0.00 0.00 0.00 1.98
123 124 8.080083 GTCGATGACCTTAAAACTTTGTTCTA 57.920 34.615 0.00 0.00 0.00 2.10
124 125 6.956047 GTCGATGACCTTAAAACTTTGTTCT 58.044 36.000 0.00 0.00 0.00 3.01
146 147 0.822121 ACTTTGTTCGGCCTTGGGTC 60.822 55.000 0.00 0.00 0.00 4.46
147 148 0.396556 AACTTTGTTCGGCCTTGGGT 60.397 50.000 0.00 0.00 0.00 4.51
148 149 0.750249 AAACTTTGTTCGGCCTTGGG 59.250 50.000 0.00 0.00 0.00 4.12
149 150 2.595124 AAAACTTTGTTCGGCCTTGG 57.405 45.000 0.00 0.00 0.00 3.61
150 151 4.927422 TCTTAAAACTTTGTTCGGCCTTG 58.073 39.130 0.00 0.00 0.00 3.61
151 152 4.499188 GCTCTTAAAACTTTGTTCGGCCTT 60.499 41.667 0.00 0.00 0.00 4.35
152 153 3.004419 GCTCTTAAAACTTTGTTCGGCCT 59.996 43.478 0.00 0.00 0.00 5.19
153 154 3.243267 TGCTCTTAAAACTTTGTTCGGCC 60.243 43.478 0.00 0.00 0.00 6.13
154 155 3.729217 GTGCTCTTAAAACTTTGTTCGGC 59.271 43.478 0.00 0.00 0.00 5.54
155 156 3.966218 CGTGCTCTTAAAACTTTGTTCGG 59.034 43.478 0.00 0.00 0.00 4.30
156 157 4.664851 GTCGTGCTCTTAAAACTTTGTTCG 59.335 41.667 0.00 0.00 0.00 3.95
157 158 5.677178 CAGTCGTGCTCTTAAAACTTTGTTC 59.323 40.000 0.00 0.00 0.00 3.18
158 159 5.353123 TCAGTCGTGCTCTTAAAACTTTGTT 59.647 36.000 0.00 0.00 0.00 2.83
159 160 4.873827 TCAGTCGTGCTCTTAAAACTTTGT 59.126 37.500 0.00 0.00 0.00 2.83
160 161 5.403897 TCAGTCGTGCTCTTAAAACTTTG 57.596 39.130 0.00 0.00 0.00 2.77
161 162 5.992217 AGATCAGTCGTGCTCTTAAAACTTT 59.008 36.000 0.00 0.00 0.00 2.66
162 163 5.406780 CAGATCAGTCGTGCTCTTAAAACTT 59.593 40.000 0.00 0.00 25.98 2.66
163 164 4.926238 CAGATCAGTCGTGCTCTTAAAACT 59.074 41.667 0.00 0.00 25.98 2.66
164 165 4.923871 TCAGATCAGTCGTGCTCTTAAAAC 59.076 41.667 0.00 0.00 25.98 2.43
165 166 5.134202 TCAGATCAGTCGTGCTCTTAAAA 57.866 39.130 0.00 0.00 25.98 1.52
166 167 4.783764 TCAGATCAGTCGTGCTCTTAAA 57.216 40.909 0.00 0.00 25.98 1.52
167 168 4.380973 CCTTCAGATCAGTCGTGCTCTTAA 60.381 45.833 0.00 0.00 25.98 1.85
168 169 3.129462 CCTTCAGATCAGTCGTGCTCTTA 59.871 47.826 0.00 0.00 25.98 2.10
169 170 2.094286 CCTTCAGATCAGTCGTGCTCTT 60.094 50.000 0.00 0.00 25.98 2.85
170 171 1.476085 CCTTCAGATCAGTCGTGCTCT 59.524 52.381 0.00 0.00 28.75 4.09
171 172 1.474478 TCCTTCAGATCAGTCGTGCTC 59.526 52.381 0.00 0.00 0.00 4.26
172 173 1.550327 TCCTTCAGATCAGTCGTGCT 58.450 50.000 0.00 0.00 0.00 4.40
173 174 1.996191 GTTCCTTCAGATCAGTCGTGC 59.004 52.381 0.00 0.00 0.00 5.34
174 175 3.584406 AGTTCCTTCAGATCAGTCGTG 57.416 47.619 0.00 0.00 0.00 4.35
175 176 3.829601 AGAAGTTCCTTCAGATCAGTCGT 59.170 43.478 0.00 0.00 42.37 4.34
176 177 4.448537 AGAAGTTCCTTCAGATCAGTCG 57.551 45.455 0.00 0.00 42.37 4.18
177 178 5.407995 CACAAGAAGTTCCTTCAGATCAGTC 59.592 44.000 0.00 0.00 42.37 3.51
178 179 5.070981 TCACAAGAAGTTCCTTCAGATCAGT 59.929 40.000 0.00 0.00 42.37 3.41
179 180 5.545588 TCACAAGAAGTTCCTTCAGATCAG 58.454 41.667 0.00 0.00 42.37 2.90
180 181 5.551305 TCACAAGAAGTTCCTTCAGATCA 57.449 39.130 0.00 0.00 42.37 2.92
181 182 6.867662 TTTCACAAGAAGTTCCTTCAGATC 57.132 37.500 0.00 0.00 42.37 2.75
182 183 6.294397 GCATTTCACAAGAAGTTCCTTCAGAT 60.294 38.462 0.00 0.00 42.37 2.90
183 184 5.009010 GCATTTCACAAGAAGTTCCTTCAGA 59.991 40.000 0.00 0.00 42.37 3.27
184 185 5.009410 AGCATTTCACAAGAAGTTCCTTCAG 59.991 40.000 0.00 1.81 42.37 3.02
185 186 4.889409 AGCATTTCACAAGAAGTTCCTTCA 59.111 37.500 0.00 0.00 42.37 3.02
186 187 5.009010 TCAGCATTTCACAAGAAGTTCCTTC 59.991 40.000 0.00 0.00 40.45 3.46
187 188 4.889409 TCAGCATTTCACAAGAAGTTCCTT 59.111 37.500 0.00 0.00 34.71 3.36
188 189 4.276926 GTCAGCATTTCACAAGAAGTTCCT 59.723 41.667 0.00 0.00 34.71 3.36
189 190 4.540824 GTCAGCATTTCACAAGAAGTTCC 58.459 43.478 0.00 0.00 34.71 3.62
190 191 4.024893 TCGTCAGCATTTCACAAGAAGTTC 60.025 41.667 0.00 0.00 34.71 3.01
191 192 3.876914 TCGTCAGCATTTCACAAGAAGTT 59.123 39.130 0.00 0.00 34.71 2.66
192 193 3.466836 TCGTCAGCATTTCACAAGAAGT 58.533 40.909 0.00 0.00 34.71 3.01
193 194 3.666374 GCTCGTCAGCATTTCACAAGAAG 60.666 47.826 0.00 0.00 46.06 2.85
194 195 2.224079 GCTCGTCAGCATTTCACAAGAA 59.776 45.455 0.00 0.00 46.06 2.52
195 196 1.800586 GCTCGTCAGCATTTCACAAGA 59.199 47.619 0.00 0.00 46.06 3.02
196 197 2.238245 GCTCGTCAGCATTTCACAAG 57.762 50.000 0.00 0.00 46.06 3.16
207 208 1.017701 TCTGCTGCATTGCTCGTCAG 61.018 55.000 10.49 10.90 0.00 3.51
208 209 0.392060 ATCTGCTGCATTGCTCGTCA 60.392 50.000 10.49 1.96 0.00 4.35
209 210 0.027716 CATCTGCTGCATTGCTCGTC 59.972 55.000 10.49 0.00 0.00 4.20
210 211 2.095750 CATCTGCTGCATTGCTCGT 58.904 52.632 10.49 0.00 0.00 4.18
211 212 4.998294 CATCTGCTGCATTGCTCG 57.002 55.556 10.49 2.31 0.00 5.03
220 221 3.132139 AGGCGCTTGCATCTGCTG 61.132 61.111 7.64 0.00 42.66 4.41
221 222 3.132139 CAGGCGCTTGCATCTGCT 61.132 61.111 6.58 0.00 42.66 4.24
222 223 3.392595 GACAGGCGCTTGCATCTGC 62.393 63.158 20.58 3.91 41.71 4.26
223 224 1.579964 TTGACAGGCGCTTGCATCTG 61.580 55.000 20.58 13.31 41.71 2.90
224 225 0.679002 ATTGACAGGCGCTTGCATCT 60.679 50.000 20.58 0.00 41.71 2.90
225 226 0.171903 AATTGACAGGCGCTTGCATC 59.828 50.000 20.58 11.25 41.71 3.91
226 227 0.108992 CAATTGACAGGCGCTTGCAT 60.109 50.000 20.58 6.53 41.71 3.96
227 228 1.286570 CAATTGACAGGCGCTTGCA 59.713 52.632 20.58 15.33 41.71 4.08
228 229 1.444895 CCAATTGACAGGCGCTTGC 60.445 57.895 20.58 12.82 38.11 4.01
229 230 0.169672 CTCCAATTGACAGGCGCTTG 59.830 55.000 19.01 19.01 0.00 4.01
230 231 0.036732 TCTCCAATTGACAGGCGCTT 59.963 50.000 7.64 0.00 0.00 4.68
231 232 0.036732 TTCTCCAATTGACAGGCGCT 59.963 50.000 7.64 0.00 0.00 5.92
232 233 0.881118 TTTCTCCAATTGACAGGCGC 59.119 50.000 7.12 0.00 0.00 6.53
233 234 3.641437 TTTTTCTCCAATTGACAGGCG 57.359 42.857 7.12 0.00 0.00 5.52
253 254 2.153547 CTCGGGCGGGCAACATTTTT 62.154 55.000 3.27 0.00 39.74 1.94
254 255 2.598985 TCGGGCGGGCAACATTTT 60.599 55.556 3.27 0.00 39.74 1.82
255 256 3.061848 CTCGGGCGGGCAACATTT 61.062 61.111 3.27 0.00 39.74 2.32
256 257 3.976701 CTCTCGGGCGGGCAACATT 62.977 63.158 3.27 0.00 39.74 2.71
257 258 4.473520 CTCTCGGGCGGGCAACAT 62.474 66.667 3.27 0.00 39.74 2.71
269 270 0.677098 TCAAGACTCCCGGACTCTCG 60.677 60.000 0.73 0.00 0.00 4.04
270 271 1.407258 CATCAAGACTCCCGGACTCTC 59.593 57.143 0.73 0.00 0.00 3.20
271 272 1.479709 CATCAAGACTCCCGGACTCT 58.520 55.000 0.73 0.00 0.00 3.24
272 273 0.461961 CCATCAAGACTCCCGGACTC 59.538 60.000 0.73 0.00 0.00 3.36
273 274 1.617947 GCCATCAAGACTCCCGGACT 61.618 60.000 0.73 0.00 0.00 3.85
274 275 1.153349 GCCATCAAGACTCCCGGAC 60.153 63.158 0.73 0.00 0.00 4.79
275 276 2.367202 GGCCATCAAGACTCCCGGA 61.367 63.158 0.73 0.00 0.00 5.14
276 277 2.190578 GGCCATCAAGACTCCCGG 59.809 66.667 0.00 0.00 0.00 5.73
277 278 1.144936 GAGGCCATCAAGACTCCCG 59.855 63.158 5.01 0.00 0.00 5.14
278 279 0.179936 CAGAGGCCATCAAGACTCCC 59.820 60.000 5.01 0.00 0.00 4.30
279 280 1.198713 TCAGAGGCCATCAAGACTCC 58.801 55.000 5.01 0.00 0.00 3.85
280 281 3.204526 CAATCAGAGGCCATCAAGACTC 58.795 50.000 5.01 0.00 0.00 3.36
281 282 2.683152 GCAATCAGAGGCCATCAAGACT 60.683 50.000 5.01 0.00 0.00 3.24
282 283 1.674962 GCAATCAGAGGCCATCAAGAC 59.325 52.381 5.01 0.00 0.00 3.01
283 284 1.282738 TGCAATCAGAGGCCATCAAGA 59.717 47.619 5.01 2.88 0.00 3.02
284 285 1.758936 TGCAATCAGAGGCCATCAAG 58.241 50.000 5.01 0.00 0.00 3.02
285 286 2.429250 CAATGCAATCAGAGGCCATCAA 59.571 45.455 5.01 0.00 0.00 2.57
286 287 2.028876 CAATGCAATCAGAGGCCATCA 58.971 47.619 5.01 0.00 0.00 3.07
287 288 1.340248 CCAATGCAATCAGAGGCCATC 59.660 52.381 5.01 0.00 0.00 3.51
288 289 1.410004 CCAATGCAATCAGAGGCCAT 58.590 50.000 5.01 0.00 0.00 4.40
289 290 0.685131 CCCAATGCAATCAGAGGCCA 60.685 55.000 5.01 0.00 0.00 5.36
290 291 2.024590 GCCCAATGCAATCAGAGGCC 62.025 60.000 0.00 0.00 40.77 5.19
291 292 1.440476 GCCCAATGCAATCAGAGGC 59.560 57.895 0.00 0.00 40.77 4.70
292 293 0.396695 AGGCCCAATGCAATCAGAGG 60.397 55.000 0.00 0.00 43.89 3.69
293 294 0.744874 CAGGCCCAATGCAATCAGAG 59.255 55.000 0.00 0.00 43.89 3.35
294 295 0.685131 CCAGGCCCAATGCAATCAGA 60.685 55.000 0.00 0.00 43.89 3.27
295 296 1.682451 CCCAGGCCCAATGCAATCAG 61.682 60.000 0.00 0.00 43.89 2.90
296 297 1.686455 CCCAGGCCCAATGCAATCA 60.686 57.895 0.00 0.00 43.89 2.57
297 298 1.266867 AACCCAGGCCCAATGCAATC 61.267 55.000 0.00 0.00 43.89 2.67
298 299 1.229593 AACCCAGGCCCAATGCAAT 60.230 52.632 0.00 0.00 43.89 3.56
299 300 2.203750 AACCCAGGCCCAATGCAA 59.796 55.556 0.00 0.00 43.89 4.08
300 301 2.604079 CAACCCAGGCCCAATGCA 60.604 61.111 0.00 0.00 43.89 3.96
301 302 1.266867 ATTCAACCCAGGCCCAATGC 61.267 55.000 0.00 0.00 40.16 3.56
302 303 0.538118 CATTCAACCCAGGCCCAATG 59.462 55.000 0.00 0.00 0.00 2.82
303 304 0.618393 CCATTCAACCCAGGCCCAAT 60.618 55.000 0.00 0.00 0.00 3.16
304 305 1.229145 CCATTCAACCCAGGCCCAA 60.229 57.895 0.00 0.00 0.00 4.12
305 306 2.153898 CTCCATTCAACCCAGGCCCA 62.154 60.000 0.00 0.00 0.00 5.36
306 307 1.380380 CTCCATTCAACCCAGGCCC 60.380 63.158 0.00 0.00 0.00 5.80
307 308 2.054453 GCTCCATTCAACCCAGGCC 61.054 63.158 0.00 0.00 0.00 5.19
308 309 0.899717 TTGCTCCATTCAACCCAGGC 60.900 55.000 0.00 0.00 0.00 4.85
309 310 1.479323 CATTGCTCCATTCAACCCAGG 59.521 52.381 0.00 0.00 0.00 4.45
310 311 1.134907 GCATTGCTCCATTCAACCCAG 60.135 52.381 0.16 0.00 0.00 4.45
311 312 0.896923 GCATTGCTCCATTCAACCCA 59.103 50.000 0.16 0.00 0.00 4.51
312 313 0.176449 GGCATTGCTCCATTCAACCC 59.824 55.000 8.82 0.00 0.00 4.11
313 314 0.176449 GGGCATTGCTCCATTCAACC 59.824 55.000 8.82 0.00 0.00 3.77
314 315 3.746900 GGGCATTGCTCCATTCAAC 57.253 52.632 8.82 0.00 0.00 3.18
322 323 2.514824 GGTCTCGGGGCATTGCTC 60.515 66.667 8.82 3.81 0.00 4.26
323 324 4.473520 CGGTCTCGGGGCATTGCT 62.474 66.667 8.82 0.00 0.00 3.91
324 325 4.467084 TCGGTCTCGGGGCATTGC 62.467 66.667 0.00 0.00 36.95 3.56
325 326 2.202932 CTCGGTCTCGGGGCATTG 60.203 66.667 0.00 0.00 36.95 2.82
326 327 2.363795 TCTCGGTCTCGGGGCATT 60.364 61.111 0.00 0.00 37.49 3.56
327 328 3.148279 GTCTCGGTCTCGGGGCAT 61.148 66.667 0.00 0.00 41.87 4.40
339 340 1.006805 GATCTGATGCCCGGTCTCG 60.007 63.158 0.00 0.00 0.00 4.04
340 341 0.033228 CAGATCTGATGCCCGGTCTC 59.967 60.000 18.34 0.00 0.00 3.36
341 342 2.037620 GCAGATCTGATGCCCGGTCT 62.038 60.000 27.04 0.00 37.73 3.85
342 343 1.596477 GCAGATCTGATGCCCGGTC 60.596 63.158 27.04 1.04 37.73 4.79
343 344 2.507944 GCAGATCTGATGCCCGGT 59.492 61.111 27.04 0.00 37.73 5.28
348 349 1.590932 AATCACGGCAGATCTGATGC 58.409 50.000 27.04 11.92 43.09 3.91
349 350 5.739752 TTTTAATCACGGCAGATCTGATG 57.260 39.130 27.04 19.01 0.00 3.07
350 351 6.949352 ATTTTTAATCACGGCAGATCTGAT 57.051 33.333 27.04 7.74 0.00 2.90
351 352 6.757897 AATTTTTAATCACGGCAGATCTGA 57.242 33.333 27.04 5.42 0.00 3.27
352 353 7.028962 TCAAATTTTTAATCACGGCAGATCTG 58.971 34.615 18.84 18.84 0.00 2.90
353 354 7.156876 TCAAATTTTTAATCACGGCAGATCT 57.843 32.000 0.00 0.00 0.00 2.75
354 355 7.489113 ACATCAAATTTTTAATCACGGCAGATC 59.511 33.333 0.00 0.00 0.00 2.75
355 356 7.322664 ACATCAAATTTTTAATCACGGCAGAT 58.677 30.769 0.00 0.00 0.00 2.90
356 357 6.686630 ACATCAAATTTTTAATCACGGCAGA 58.313 32.000 0.00 0.00 0.00 4.26
357 358 6.585702 TGACATCAAATTTTTAATCACGGCAG 59.414 34.615 0.00 0.00 0.00 4.85
358 359 6.450545 TGACATCAAATTTTTAATCACGGCA 58.549 32.000 0.00 0.00 0.00 5.69
359 360 6.454186 GCTGACATCAAATTTTTAATCACGGC 60.454 38.462 0.00 0.00 0.00 5.68
360 361 6.034898 GGCTGACATCAAATTTTTAATCACGG 59.965 38.462 0.00 0.00 0.00 4.94
361 362 6.034898 GGGCTGACATCAAATTTTTAATCACG 59.965 38.462 0.00 0.00 0.00 4.35
362 363 7.063780 CAGGGCTGACATCAAATTTTTAATCAC 59.936 37.037 0.00 0.00 0.00 3.06
363 364 7.098477 CAGGGCTGACATCAAATTTTTAATCA 58.902 34.615 0.00 0.00 0.00 2.57
364 365 6.036408 GCAGGGCTGACATCAAATTTTTAATC 59.964 38.462 0.00 0.00 0.00 1.75
365 366 5.876460 GCAGGGCTGACATCAAATTTTTAAT 59.124 36.000 0.00 0.00 0.00 1.40
366 367 5.237048 GCAGGGCTGACATCAAATTTTTAA 58.763 37.500 0.00 0.00 0.00 1.52
367 368 4.617995 CGCAGGGCTGACATCAAATTTTTA 60.618 41.667 0.00 0.00 0.00 1.52
368 369 3.667360 GCAGGGCTGACATCAAATTTTT 58.333 40.909 0.00 0.00 0.00 1.94
369 370 2.353011 CGCAGGGCTGACATCAAATTTT 60.353 45.455 0.00 0.00 0.00 1.82
370 371 1.203052 CGCAGGGCTGACATCAAATTT 59.797 47.619 0.00 0.00 0.00 1.82
371 372 0.813184 CGCAGGGCTGACATCAAATT 59.187 50.000 0.00 0.00 0.00 1.82
372 373 0.322816 ACGCAGGGCTGACATCAAAT 60.323 50.000 0.00 0.00 0.00 2.32
373 374 0.323302 TACGCAGGGCTGACATCAAA 59.677 50.000 0.00 0.00 0.00 2.69
374 375 0.391130 GTACGCAGGGCTGACATCAA 60.391 55.000 0.00 0.00 0.00 2.57
375 376 1.218047 GTACGCAGGGCTGACATCA 59.782 57.895 0.00 0.00 0.00 3.07
376 377 0.179073 ATGTACGCAGGGCTGACATC 60.179 55.000 0.00 0.00 0.00 3.06
377 378 1.119684 TATGTACGCAGGGCTGACAT 58.880 50.000 9.01 9.01 35.09 3.06
378 379 0.174845 GTATGTACGCAGGGCTGACA 59.825 55.000 0.00 0.00 0.00 3.58
379 380 0.174845 TGTATGTACGCAGGGCTGAC 59.825 55.000 0.00 0.00 0.00 3.51
380 381 0.459899 CTGTATGTACGCAGGGCTGA 59.540 55.000 0.00 0.00 0.00 4.26
381 382 0.459899 TCTGTATGTACGCAGGGCTG 59.540 55.000 10.60 0.00 33.81 4.85
382 383 0.747255 CTCTGTATGTACGCAGGGCT 59.253 55.000 10.60 0.00 33.81 5.19
383 384 3.274393 CTCTGTATGTACGCAGGGC 57.726 57.895 10.60 0.00 33.81 5.19
384 385 0.747255 AGCTCTGTATGTACGCAGGG 59.253 55.000 10.60 8.97 36.35 4.45
385 386 3.633235 CTTAGCTCTGTATGTACGCAGG 58.367 50.000 0.00 4.87 33.81 4.85
386 387 3.046390 GCTTAGCTCTGTATGTACGCAG 58.954 50.000 0.00 5.79 0.00 5.18
387 388 2.688446 AGCTTAGCTCTGTATGTACGCA 59.312 45.455 0.00 0.00 30.62 5.24
388 389 3.357166 AGCTTAGCTCTGTATGTACGC 57.643 47.619 0.00 0.00 30.62 4.42
435 437 6.104439 ACTTGTAGTACAGTAATCGTCTCG 57.896 41.667 2.68 0.00 0.00 4.04
439 441 5.166398 GGCAACTTGTAGTACAGTAATCGT 58.834 41.667 2.68 0.00 0.00 3.73
568 586 3.211963 GGAGCGCATGGCCGATTT 61.212 61.111 11.47 0.00 45.17 2.17
629 651 0.178992 TGTTGGGCTTCCTGGTCTTG 60.179 55.000 0.00 0.00 0.00 3.02
634 656 2.283173 GGGTGTTGGGCTTCCTGG 60.283 66.667 0.00 0.00 0.00 4.45
659 681 5.869344 AGCCTGTTTCTTGAGAAAACAAAAC 59.131 36.000 7.69 0.00 44.58 2.43
680 702 2.050077 GGCAAAGTTGACGCAGCC 60.050 61.111 0.00 0.00 34.71 4.85
761 788 5.045872 GCCGGATATACTTAACAAGTTCGT 58.954 41.667 5.05 0.00 42.81 3.85
762 789 4.147653 CGCCGGATATACTTAACAAGTTCG 59.852 45.833 5.05 0.00 42.81 3.95
778 805 5.717078 TGAATAGTTTATAGACGCCGGAT 57.283 39.130 5.05 0.00 0.00 4.18
779 806 5.284079 GTTGAATAGTTTATAGACGCCGGA 58.716 41.667 5.05 0.00 0.00 5.14
780 807 4.147653 CGTTGAATAGTTTATAGACGCCGG 59.852 45.833 0.00 0.00 0.00 6.13
782 809 5.174579 GTCCGTTGAATAGTTTATAGACGCC 59.825 44.000 0.00 0.00 0.00 5.68
784 811 5.397534 CCGTCCGTTGAATAGTTTATAGACG 59.602 44.000 0.00 0.00 42.07 4.18
785 812 6.268566 ACCGTCCGTTGAATAGTTTATAGAC 58.731 40.000 0.00 0.00 0.00 2.59
800 827 0.669625 GCTAAGCTCAACCGTCCGTT 60.670 55.000 0.00 0.00 33.90 4.44
801 828 1.080025 GCTAAGCTCAACCGTCCGT 60.080 57.895 0.00 0.00 0.00 4.69
802 829 1.078759 CTGCTAAGCTCAACCGTCCG 61.079 60.000 0.00 0.00 0.00 4.79
803 830 1.362406 GCTGCTAAGCTCAACCGTCC 61.362 60.000 0.00 0.00 46.60 4.79
804 831 2.082354 GCTGCTAAGCTCAACCGTC 58.918 57.895 0.00 0.00 46.60 4.79
820 847 6.329197 TGAAAGCATACTTAGTTATAGGGGCT 59.671 38.462 0.00 0.00 34.05 5.19
830 857 5.551233 TGCAGAGTTGAAAGCATACTTAGT 58.449 37.500 0.00 0.00 34.05 2.24
831 858 5.641209 ACTGCAGAGTTGAAAGCATACTTAG 59.359 40.000 23.35 0.00 36.28 2.18
832 859 5.551233 ACTGCAGAGTTGAAAGCATACTTA 58.449 37.500 23.35 0.00 36.28 2.24
833 860 4.392940 ACTGCAGAGTTGAAAGCATACTT 58.607 39.130 23.35 0.00 36.28 2.24
841 868 4.035558 GTGATGTGAACTGCAGAGTTGAAA 59.964 41.667 23.35 0.00 42.80 2.69
874 909 3.535629 CTGACCAACAGCCCGCTGA 62.536 63.158 22.97 0.00 46.30 4.26
883 918 0.106708 GGAGCACTGACTGACCAACA 59.893 55.000 0.00 0.00 0.00 3.33
884 919 0.394565 AGGAGCACTGACTGACCAAC 59.605 55.000 0.00 0.00 0.00 3.77
885 920 1.618837 GTAGGAGCACTGACTGACCAA 59.381 52.381 0.00 0.00 0.00 3.67
886 921 1.257743 GTAGGAGCACTGACTGACCA 58.742 55.000 0.00 0.00 0.00 4.02
887 922 1.257743 TGTAGGAGCACTGACTGACC 58.742 55.000 0.00 0.00 0.00 4.02
888 923 3.386768 TTTGTAGGAGCACTGACTGAC 57.613 47.619 0.00 0.00 0.00 3.51
889 924 4.623932 AATTTGTAGGAGCACTGACTGA 57.376 40.909 0.00 0.00 0.00 3.41
890 925 5.237815 TGTAATTTGTAGGAGCACTGACTG 58.762 41.667 0.00 0.00 0.00 3.51
891 926 5.012148 ACTGTAATTTGTAGGAGCACTGACT 59.988 40.000 0.00 0.00 0.00 3.41
892 927 5.238583 ACTGTAATTTGTAGGAGCACTGAC 58.761 41.667 0.00 0.00 0.00 3.51
893 928 5.483685 ACTGTAATTTGTAGGAGCACTGA 57.516 39.130 0.00 0.00 0.00 3.41
894 929 6.398918 ACTACTGTAATTTGTAGGAGCACTG 58.601 40.000 13.66 0.00 40.11 3.66
895 930 6.607004 ACTACTGTAATTTGTAGGAGCACT 57.393 37.500 13.66 0.00 40.11 4.40
896 931 7.010275 GCTAACTACTGTAATTTGTAGGAGCAC 59.990 40.741 20.94 1.90 42.64 4.40
897 932 7.039882 GCTAACTACTGTAATTTGTAGGAGCA 58.960 38.462 20.94 4.97 42.64 4.26
898 933 7.039882 TGCTAACTACTGTAATTTGTAGGAGC 58.960 38.462 20.12 20.12 42.98 4.70
899 934 7.222999 GCTGCTAACTACTGTAATTTGTAGGAG 59.777 40.741 9.51 3.62 40.11 3.69
900 935 7.039882 GCTGCTAACTACTGTAATTTGTAGGA 58.960 38.462 9.51 0.00 40.11 2.94
901 936 6.816640 TGCTGCTAACTACTGTAATTTGTAGG 59.183 38.462 9.51 2.84 40.11 3.18
902 937 7.464710 GCTGCTGCTAACTACTGTAATTTGTAG 60.465 40.741 8.53 4.77 38.11 2.74
903 938 6.312918 GCTGCTGCTAACTACTGTAATTTGTA 59.687 38.462 8.53 0.00 36.03 2.41
904 939 5.122396 GCTGCTGCTAACTACTGTAATTTGT 59.878 40.000 8.53 0.00 36.03 2.83
905 940 5.122239 TGCTGCTGCTAACTACTGTAATTTG 59.878 40.000 17.00 0.00 40.48 2.32
906 941 5.245531 TGCTGCTGCTAACTACTGTAATTT 58.754 37.500 17.00 0.00 40.48 1.82
907 942 4.832248 TGCTGCTGCTAACTACTGTAATT 58.168 39.130 17.00 0.00 40.48 1.40
908 943 4.471904 TGCTGCTGCTAACTACTGTAAT 57.528 40.909 17.00 0.00 40.48 1.89
909 944 3.953712 TGCTGCTGCTAACTACTGTAA 57.046 42.857 17.00 0.00 40.48 2.41
910 945 3.258372 ACTTGCTGCTGCTAACTACTGTA 59.742 43.478 17.00 0.00 40.48 2.74
911 946 2.037772 ACTTGCTGCTGCTAACTACTGT 59.962 45.455 17.00 0.00 40.48 3.55
912 947 2.670414 GACTTGCTGCTGCTAACTACTG 59.330 50.000 17.00 0.00 40.48 2.74
913 948 2.564947 AGACTTGCTGCTGCTAACTACT 59.435 45.455 17.00 6.05 40.48 2.57
930 965 8.163408 AGTGATCTACTATCTGCTAATCAGACT 58.837 37.037 0.00 0.00 42.52 3.24
931 966 8.335532 AGTGATCTACTATCTGCTAATCAGAC 57.664 38.462 0.00 0.00 42.52 3.51
932 967 8.791675 CAAGTGATCTACTATCTGCTAATCAGA 58.208 37.037 0.00 0.00 46.78 3.27
933 968 7.541783 GCAAGTGATCTACTATCTGCTAATCAG 59.458 40.741 10.59 0.00 40.58 2.90
934 969 7.232330 AGCAAGTGATCTACTATCTGCTAATCA 59.768 37.037 15.38 0.00 44.86 2.57
947 982 2.964740 TCACAGCAGCAAGTGATCTAC 58.035 47.619 14.67 0.00 39.65 2.59
962 997 5.281693 TCAGTCGCACAAATAAATCACAG 57.718 39.130 0.00 0.00 0.00 3.66
963 998 5.445806 CGATCAGTCGCACAAATAAATCACA 60.446 40.000 0.00 0.00 41.49 3.58
993 1028 4.260609 ATGGCCGCCATGATCGCT 62.261 61.111 24.52 0.00 43.39 4.93
1033 1070 4.980903 CGCGTGCGGCTTTTGCTT 62.981 61.111 6.30 0.00 46.54 3.91
1284 1321 3.127533 GTCATGGTGGAGCGGCAC 61.128 66.667 1.45 0.00 0.00 5.01
1538 1673 4.139234 GGTACCCGTCCGTGAGCC 62.139 72.222 0.00 0.00 0.00 4.70
2315 2462 0.979665 CATGGCCTCCCGTATCATCT 59.020 55.000 3.32 0.00 0.00 2.90
2343 2490 2.507944 CGCATCTCCTCCCCCTTG 59.492 66.667 0.00 0.00 0.00 3.61
2425 6748 5.110814 TGAATTAATCCGTCCAGATTGGT 57.889 39.130 0.00 0.00 39.03 3.67
2487 6810 0.385473 GGACGTCACGCACCAATTTG 60.385 55.000 18.91 0.00 0.00 2.32
2488 6811 1.512156 GGGACGTCACGCACCAATTT 61.512 55.000 18.91 0.00 0.00 1.82
2495 6818 0.669318 GAAATCAGGGACGTCACGCA 60.669 55.000 18.91 6.00 0.00 5.24
2496 6819 1.683790 CGAAATCAGGGACGTCACGC 61.684 60.000 18.91 0.00 0.00 5.34
2497 6820 0.109458 TCGAAATCAGGGACGTCACG 60.109 55.000 18.91 10.53 0.00 4.35
2498 6821 2.194271 GATCGAAATCAGGGACGTCAC 58.806 52.381 18.91 15.14 31.76 3.67
2499 6822 1.202256 CGATCGAAATCAGGGACGTCA 60.202 52.381 18.91 0.00 31.76 4.35
2510 6838 4.690748 ACACAATGAGAACACGATCGAAAT 59.309 37.500 24.34 6.56 0.00 2.17
2530 6858 1.281925 ATCCCCCTGGACATGGACAC 61.282 60.000 0.00 0.00 45.58 3.67
2555 6883 6.703319 TCAAATAGTACCAATTCAGAACCGA 58.297 36.000 0.00 0.00 0.00 4.69
2570 6898 8.526978 GCTCTCCACATCTATCATCAAATAGTA 58.473 37.037 0.00 0.00 32.18 1.82
2571 6899 7.235193 AGCTCTCCACATCTATCATCAAATAGT 59.765 37.037 0.00 0.00 32.18 2.12
2572 6900 7.546316 CAGCTCTCCACATCTATCATCAAATAG 59.454 40.741 0.00 0.00 0.00 1.73
2573 6901 7.384477 CAGCTCTCCACATCTATCATCAAATA 58.616 38.462 0.00 0.00 0.00 1.40
2574 6902 6.231951 CAGCTCTCCACATCTATCATCAAAT 58.768 40.000 0.00 0.00 0.00 2.32
2576 6904 4.502777 GCAGCTCTCCACATCTATCATCAA 60.503 45.833 0.00 0.00 0.00 2.57
2578 6906 3.258872 AGCAGCTCTCCACATCTATCATC 59.741 47.826 0.00 0.00 0.00 2.92
2579 6907 3.241156 AGCAGCTCTCCACATCTATCAT 58.759 45.455 0.00 0.00 0.00 2.45
2580 6908 2.627221 GAGCAGCTCTCCACATCTATCA 59.373 50.000 15.78 0.00 35.77 2.15
2581 6909 2.892852 AGAGCAGCTCTCCACATCTATC 59.107 50.000 20.04 0.00 42.90 2.08
2582 6910 2.961510 AGAGCAGCTCTCCACATCTAT 58.038 47.619 20.04 0.00 42.90 1.98
2583 6911 2.450867 AGAGCAGCTCTCCACATCTA 57.549 50.000 20.04 0.00 42.90 1.98
2584 6912 1.570803 AAGAGCAGCTCTCCACATCT 58.429 50.000 25.58 4.97 40.28 2.90
2585 6913 2.802774 GCTAAGAGCAGCTCTCCACATC 60.803 54.545 25.58 8.11 40.28 3.06
2586 6914 1.138661 GCTAAGAGCAGCTCTCCACAT 59.861 52.381 25.58 11.91 40.28 3.21
2626 6954 1.724581 GCGCGCGCTACAAGTTTTT 60.725 52.632 44.38 0.00 38.26 1.94
2627 6955 2.127383 GCGCGCGCTACAAGTTTT 60.127 55.556 44.38 0.00 38.26 2.43
2637 6965 4.741781 ACAGAACAATGCGCGCGC 62.742 61.111 45.02 45.02 42.35 6.86
2638 6966 1.268113 AAAACAGAACAATGCGCGCG 61.268 50.000 28.44 28.44 0.00 6.86
2639 6967 0.159345 CAAAACAGAACAATGCGCGC 59.841 50.000 27.26 27.26 0.00 6.86
2640 6968 0.159345 GCAAAACAGAACAATGCGCG 59.841 50.000 0.00 0.00 0.00 6.86
2641 6969 1.490621 AGCAAAACAGAACAATGCGC 58.509 45.000 0.00 0.00 41.72 6.09
2642 6970 2.859538 ACAAGCAAAACAGAACAATGCG 59.140 40.909 0.00 0.00 41.72 4.73
2643 6971 4.863152 AACAAGCAAAACAGAACAATGC 57.137 36.364 0.00 0.00 37.28 3.56
2644 6972 5.514914 ACGTAACAAGCAAAACAGAACAATG 59.485 36.000 0.00 0.00 0.00 2.82
2645 6973 5.646606 ACGTAACAAGCAAAACAGAACAAT 58.353 33.333 0.00 0.00 0.00 2.71
2646 6974 5.049398 ACGTAACAAGCAAAACAGAACAA 57.951 34.783 0.00 0.00 0.00 2.83
2647 6975 4.688511 ACGTAACAAGCAAAACAGAACA 57.311 36.364 0.00 0.00 0.00 3.18
2648 6976 6.523893 TGTTTACGTAACAAGCAAAACAGAAC 59.476 34.615 7.70 0.00 43.58 3.01
2649 6977 6.609533 TGTTTACGTAACAAGCAAAACAGAA 58.390 32.000 7.70 0.00 43.58 3.02
2650 6978 6.179504 TGTTTACGTAACAAGCAAAACAGA 57.820 33.333 7.70 0.00 43.58 3.41
2661 6989 1.127701 GCGACGGTGTTTACGTAACA 58.872 50.000 7.70 6.98 45.68 2.41
2662 6990 0.434628 GGCGACGGTGTTTACGTAAC 59.565 55.000 7.70 4.36 45.68 2.50
2663 6991 2.807878 GGCGACGGTGTTTACGTAA 58.192 52.632 3.29 3.29 45.68 3.18
2664 6992 4.550395 GGCGACGGTGTTTACGTA 57.450 55.556 0.00 0.00 45.68 3.57
2936 7290 5.754890 GGTGCAATGAAACAAAATGAAGAGT 59.245 36.000 0.00 0.00 0.00 3.24
2951 7305 4.322123 CCTCAAATGAACATGGTGCAATGA 60.322 41.667 5.39 0.77 0.00 2.57
3093 7447 5.835113 ACAACAAAACACATGTAGAGCTT 57.165 34.783 0.00 0.00 0.00 3.74
3177 7531 3.071874 AGCCTAGTTTGCATGCTTGTA 57.928 42.857 20.33 4.50 0.00 2.41
3263 7619 6.048732 TCTGTAGCATCAAGTTTACATGGA 57.951 37.500 0.00 0.00 0.00 3.41
3305 7661 8.237811 ACAAAACATCCTTACTGAACATCTTT 57.762 30.769 0.00 0.00 0.00 2.52
3306 7662 7.823745 ACAAAACATCCTTACTGAACATCTT 57.176 32.000 0.00 0.00 0.00 2.40
3428 7784 2.961522 AACACGTAAACAATCTGCCG 57.038 45.000 0.00 0.00 0.00 5.69
3453 7809 7.777095 ACCAACTACAATAAGCTTGACAAAAA 58.223 30.769 9.86 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.