Multiple sequence alignment - TraesCS6D01G346800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G346800 chr6D 100.000 4746 0 0 1 4746 445851115 445855860 0.000000e+00 8765.0
1 TraesCS6D01G346800 chr6D 83.377 1516 197 33 1693 3188 445812308 445810828 0.000000e+00 1352.0
2 TraesCS6D01G346800 chr6D 90.499 421 39 1 3251 3670 445810739 445810319 5.370000e-154 555.0
3 TraesCS6D01G346800 chr6D 88.914 442 43 3 1159 1600 445820853 445820418 1.500000e-149 540.0
4 TraesCS6D01G346800 chr6D 88.688 442 44 3 1159 1600 445892489 445892924 6.990000e-148 534.0
5 TraesCS6D01G346800 chr6D 86.493 422 57 0 1693 2114 445799405 445798984 9.300000e-127 464.0
6 TraesCS6D01G346800 chr6D 87.406 397 47 2 1693 2086 445893245 445893641 2.010000e-123 453.0
7 TraesCS6D01G346800 chr6D 86.146 397 52 1 1693 2086 445820106 445819710 4.390000e-115 425.0
8 TraesCS6D01G346800 chr6D 78.759 532 65 26 3792 4284 445797156 445796634 3.570000e-81 313.0
9 TraesCS6D01G346800 chr6D 87.736 212 26 0 949 1160 445852021 445852232 1.020000e-61 248.0
10 TraesCS6D01G346800 chr6D 87.736 212 26 0 907 1118 445852063 445852274 1.020000e-61 248.0
11 TraesCS6D01G346800 chr6D 83.333 168 28 0 993 1160 445852023 445852190 6.360000e-34 156.0
12 TraesCS6D01G346800 chr6D 83.333 168 28 0 909 1076 445852107 445852274 6.360000e-34 156.0
13 TraesCS6D01G346800 chr6D 81.159 207 25 6 4079 4283 445895614 445895808 2.290000e-33 154.0
14 TraesCS6D01G346800 chr6A 91.644 3734 165 50 949 4586 592536390 592540072 0.000000e+00 5031.0
15 TraesCS6D01G346800 chr6A 88.110 942 89 14 2256 3182 592500828 592499895 0.000000e+00 1098.0
16 TraesCS6D01G346800 chr6A 87.757 923 99 10 2270 3183 592477345 592476428 0.000000e+00 1066.0
17 TraesCS6D01G346800 chr6A 93.002 543 27 8 587 1118 592536059 592536601 0.000000e+00 782.0
18 TraesCS6D01G346800 chr6A 91.211 421 36 1 3251 3670 592492900 592492480 5.330000e-159 571.0
19 TraesCS6D01G346800 chr6A 89.140 442 42 3 1159 1600 592548373 592548808 3.230000e-151 545.0
20 TraesCS6D01G346800 chr6A 86.146 397 52 2 1693 2086 592549135 592549531 4.390000e-115 425.0
21 TraesCS6D01G346800 chr6A 82.736 307 34 13 4306 4610 592551804 592552093 6.090000e-64 255.0
22 TraesCS6D01G346800 chr6A 84.706 170 26 0 907 1076 592536432 592536601 2.270000e-38 171.0
23 TraesCS6D01G346800 chr6A 88.983 118 11 2 176 292 592535834 592535950 1.380000e-30 145.0
24 TraesCS6D01G346800 chr6A 82.738 168 17 8 13 177 29492037 29491879 6.400000e-29 139.0
25 TraesCS6D01G346800 chr6B 92.239 2577 115 19 1680 4199 673616208 673613660 0.000000e+00 3572.0
26 TraesCS6D01G346800 chr6B 86.472 1678 152 22 1985 3616 672505025 672503377 0.000000e+00 1772.0
27 TraesCS6D01G346800 chr6B 83.913 1523 188 31 1693 3188 672621025 672619533 0.000000e+00 1402.0
28 TraesCS6D01G346800 chr6B 89.278 886 90 4 2299 3183 673757660 673758541 0.000000e+00 1105.0
29 TraesCS6D01G346800 chr6B 87.565 957 97 8 2243 3188 673697567 673698512 0.000000e+00 1088.0
30 TraesCS6D01G346800 chr6B 88.315 890 98 5 2299 3185 673365592 673364706 0.000000e+00 1062.0
31 TraesCS6D01G346800 chr6B 92.907 578 30 2 1036 1613 673617000 673616434 0.000000e+00 830.0
32 TraesCS6D01G346800 chr6B 82.958 710 98 16 3243 3945 673758760 673759453 1.880000e-173 619.0
33 TraesCS6D01G346800 chr6B 90.736 421 38 1 3251 3670 672619444 672619024 1.150000e-155 560.0
34 TraesCS6D01G346800 chr6B 90.736 421 38 1 3251 3670 673698601 673699021 1.150000e-155 560.0
35 TraesCS6D01G346800 chr6B 88.914 442 43 3 1159 1600 673688375 673688810 1.500000e-149 540.0
36 TraesCS6D01G346800 chr6B 80.775 723 109 20 3248 3945 673821597 673822314 5.400000e-149 538.0
37 TraesCS6D01G346800 chr6B 88.688 442 44 3 1159 1600 673024656 673025091 6.990000e-148 534.0
38 TraesCS6D01G346800 chr6B 88.688 442 43 4 1159 1600 673610090 673609656 2.510000e-147 532.0
39 TraesCS6D01G346800 chr6B 88.710 434 43 3 1159 1592 672628592 672628165 4.210000e-145 525.0
40 TraesCS6D01G346800 chr6B 87.907 430 48 3 3248 3675 672634299 672633872 1.970000e-138 503.0
41 TraesCS6D01G346800 chr6B 86.353 447 58 1 1665 2108 673757044 673757490 7.140000e-133 484.0
42 TraesCS6D01G346800 chr6B 87.909 397 45 1 1693 2086 673609329 673608933 9.300000e-127 464.0
43 TraesCS6D01G346800 chr6B 87.657 397 46 1 1693 2086 672944372 672944768 4.330000e-125 459.0
44 TraesCS6D01G346800 chr6B 82.582 488 54 25 4143 4610 672946931 672947407 7.400000e-108 401.0
45 TraesCS6D01G346800 chr6B 82.281 491 53 25 4143 4610 672896263 672896742 1.240000e-105 394.0
46 TraesCS6D01G346800 chr6B 80.645 496 57 29 4143 4610 673606874 673606390 9.780000e-92 348.0
47 TraesCS6D01G346800 chr6B 81.271 299 42 10 739 1037 673617157 673616873 3.690000e-56 230.0
48 TraesCS6D01G346800 chr6B 95.833 120 5 0 4481 4600 673613662 673613543 1.350000e-45 195.0
49 TraesCS6D01G346800 chr6B 92.366 131 10 0 949 1079 673617003 673616873 2.260000e-43 187.0
50 TraesCS6D01G346800 chr6B 83.254 209 24 6 4082 4285 672502986 672502784 1.050000e-41 182.0
51 TraesCS6D01G346800 chr6B 83.246 191 26 4 4095 4285 673759608 673759792 2.270000e-38 171.0
52 TraesCS6D01G346800 chr6B 87.586 145 14 2 3805 3945 672503304 672503160 1.060000e-36 165.0
53 TraesCS6D01G346800 chr6B 86.131 137 12 4 4481 4610 673358739 673358603 1.780000e-29 141.0
54 TraesCS6D01G346800 chr6B 81.022 137 16 8 4155 4285 672633444 672633312 3.020000e-17 100.0
55 TraesCS6D01G346800 chr6B 100.000 30 0 0 630 659 672621997 672621968 6.630000e-04 56.5
56 TraesCS6D01G346800 chr7A 97.403 77 1 1 4671 4746 50815002 50814926 3.850000e-26 130.0
57 TraesCS6D01G346800 chr5D 95.181 83 3 1 4664 4746 330595223 330595304 3.850000e-26 130.0
58 TraesCS6D01G346800 chr5D 95.181 83 3 1 4664 4746 330628902 330628983 3.850000e-26 130.0
59 TraesCS6D01G346800 chr5D 100.000 69 0 0 4678 4746 209498923 209498991 1.390000e-25 128.0
60 TraesCS6D01G346800 chr7B 83.007 153 15 6 24 173 339615770 339615914 1.390000e-25 128.0
61 TraesCS6D01G346800 chr2D 100.000 69 0 0 4678 4746 590220851 590220783 1.390000e-25 128.0
62 TraesCS6D01G346800 chrUn 98.571 70 1 0 4677 4746 34439213 34439282 1.790000e-24 124.0
63 TraesCS6D01G346800 chrUn 98.571 70 1 0 4677 4746 295537969 295538038 1.790000e-24 124.0
64 TraesCS6D01G346800 chrUn 98.571 70 1 0 4677 4746 329605383 329605452 1.790000e-24 124.0
65 TraesCS6D01G346800 chr7D 94.872 78 4 0 4669 4746 178884477 178884400 6.450000e-24 122.0
66 TraesCS6D01G346800 chr7D 82.270 141 14 6 37 173 192918911 192918778 1.400000e-20 111.0
67 TraesCS6D01G346800 chr3D 86.207 58 7 1 106 162 226968418 226968475 1.430000e-05 62.1
68 TraesCS6D01G346800 chr3B 100.000 30 0 0 113 142 315297290 315297319 6.630000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G346800 chr6D 445851115 445855860 4745 False 1914.600000 8765 88.427600 1 4746 5 chr6D.!!$F1 4745
1 TraesCS6D01G346800 chr6D 445810319 445812308 1989 True 953.500000 1352 86.938000 1693 3670 2 chr6D.!!$R2 1977
2 TraesCS6D01G346800 chr6D 445819710 445820853 1143 True 482.500000 540 87.530000 1159 2086 2 chr6D.!!$R3 927
3 TraesCS6D01G346800 chr6D 445796634 445799405 2771 True 388.500000 464 82.626000 1693 4284 2 chr6D.!!$R1 2591
4 TraesCS6D01G346800 chr6D 445892489 445895808 3319 False 380.333333 534 85.751000 1159 4283 3 chr6D.!!$F2 3124
5 TraesCS6D01G346800 chr6A 592535834 592540072 4238 False 1532.250000 5031 89.583750 176 4586 4 chr6A.!!$F1 4410
6 TraesCS6D01G346800 chr6A 592499895 592500828 933 True 1098.000000 1098 88.110000 2256 3182 1 chr6A.!!$R4 926
7 TraesCS6D01G346800 chr6A 592476428 592477345 917 True 1066.000000 1066 87.757000 2270 3183 1 chr6A.!!$R2 913
8 TraesCS6D01G346800 chr6A 592548373 592552093 3720 False 408.333333 545 86.007333 1159 4610 3 chr6A.!!$F2 3451
9 TraesCS6D01G346800 chr6B 673364706 673365592 886 True 1062.000000 1062 88.315000 2299 3185 1 chr6B.!!$R3 886
10 TraesCS6D01G346800 chr6B 673697567 673699021 1454 False 824.000000 1088 89.150500 2243 3670 2 chr6B.!!$F6 1427
11 TraesCS6D01G346800 chr6B 673606390 673617157 10767 True 794.750000 3572 88.982250 739 4610 8 chr6B.!!$R7 3871
12 TraesCS6D01G346800 chr6B 672502784 672505025 2241 True 706.333333 1772 85.770667 1985 4285 3 chr6B.!!$R4 2300
13 TraesCS6D01G346800 chr6B 672619024 672621997 2973 True 672.833333 1402 91.549667 630 3670 3 chr6B.!!$R5 3040
14 TraesCS6D01G346800 chr6B 673757044 673759792 2748 False 594.750000 1105 85.458750 1665 4285 4 chr6B.!!$F7 2620
15 TraesCS6D01G346800 chr6B 673821597 673822314 717 False 538.000000 538 80.775000 3248 3945 1 chr6B.!!$F4 697
16 TraesCS6D01G346800 chr6B 672944372 672947407 3035 False 430.000000 459 85.119500 1693 4610 2 chr6B.!!$F5 2917
17 TraesCS6D01G346800 chr6B 672633312 672634299 987 True 301.500000 503 84.464500 3248 4285 2 chr6B.!!$R6 1037

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 297 0.038526 CACTGCCTTACCGTCGACTT 60.039 55.000 14.70 2.72 0.00 3.01 F
464 466 0.109781 ATGCGAACACATGCGGAAAC 60.110 50.000 0.00 0.00 0.00 2.78 F
467 469 0.725784 CGAACACATGCGGAAACAGC 60.726 55.000 0.00 0.00 0.00 4.40 F
1731 2123 1.074405 TGCAAGGTCCTGATGCTTCTT 59.926 47.619 15.14 0.00 40.66 2.52 F
2620 3155 1.006220 CCTCATAGGCGCGTATGCA 60.006 57.895 34.18 24.39 42.97 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1121 1180 0.315706 GTCGTCGAGATCCGTTACCG 60.316 60.000 0.00 0.00 39.75 4.02 R
1579 1638 0.834612 TCCACCAACTTGAGAACGGT 59.165 50.000 0.00 0.00 0.00 4.83 R
2465 3000 0.251341 AAGGCCCTGTACCTTGCAAG 60.251 55.000 19.93 19.93 45.88 4.01 R
3083 3634 3.276846 GTGTTGCGTGCTTCCGGT 61.277 61.111 0.00 0.00 0.00 5.28 R
4614 12740 0.245813 AAGAAGAACTACCCGCGTCC 59.754 55.000 4.92 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.992063 CATCACCTATGTCTTTTAGCAACT 57.008 37.500 0.00 0.00 0.00 3.16
25 26 7.910304 CATCACCTATGTCTTTTAGCAACTAC 58.090 38.462 0.00 0.00 0.00 2.73
26 27 7.241042 TCACCTATGTCTTTTAGCAACTACT 57.759 36.000 0.00 0.00 0.00 2.57
27 28 7.321153 TCACCTATGTCTTTTAGCAACTACTC 58.679 38.462 0.00 0.00 0.00 2.59
28 29 6.535508 CACCTATGTCTTTTAGCAACTACTCC 59.464 42.308 0.00 0.00 0.00 3.85
29 30 6.049790 CCTATGTCTTTTAGCAACTACTCCC 58.950 44.000 0.00 0.00 0.00 4.30
30 31 5.763876 ATGTCTTTTAGCAACTACTCCCT 57.236 39.130 0.00 0.00 0.00 4.20
31 32 5.148651 TGTCTTTTAGCAACTACTCCCTC 57.851 43.478 0.00 0.00 0.00 4.30
32 33 4.174762 GTCTTTTAGCAACTACTCCCTCG 58.825 47.826 0.00 0.00 0.00 4.63
33 34 3.830755 TCTTTTAGCAACTACTCCCTCGT 59.169 43.478 0.00 0.00 0.00 4.18
34 35 4.282703 TCTTTTAGCAACTACTCCCTCGTT 59.717 41.667 0.00 0.00 0.00 3.85
35 36 4.612264 TTTAGCAACTACTCCCTCGTTT 57.388 40.909 0.00 0.00 0.00 3.60
36 37 2.745515 AGCAACTACTCCCTCGTTTC 57.254 50.000 0.00 0.00 0.00 2.78
37 38 2.249139 AGCAACTACTCCCTCGTTTCT 58.751 47.619 0.00 0.00 0.00 2.52
38 39 3.428532 AGCAACTACTCCCTCGTTTCTA 58.571 45.455 0.00 0.00 0.00 2.10
39 40 3.830755 AGCAACTACTCCCTCGTTTCTAA 59.169 43.478 0.00 0.00 0.00 2.10
40 41 4.282703 AGCAACTACTCCCTCGTTTCTAAA 59.717 41.667 0.00 0.00 0.00 1.85
41 42 4.992951 GCAACTACTCCCTCGTTTCTAAAA 59.007 41.667 0.00 0.00 0.00 1.52
42 43 5.642491 GCAACTACTCCCTCGTTTCTAAAAT 59.358 40.000 0.00 0.00 0.00 1.82
43 44 6.815142 GCAACTACTCCCTCGTTTCTAAAATA 59.185 38.462 0.00 0.00 0.00 1.40
44 45 7.332678 GCAACTACTCCCTCGTTTCTAAAATAA 59.667 37.037 0.00 0.00 0.00 1.40
45 46 8.870879 CAACTACTCCCTCGTTTCTAAAATAAG 58.129 37.037 0.00 0.00 0.00 1.73
46 47 8.131847 ACTACTCCCTCGTTTCTAAAATAAGT 57.868 34.615 0.00 0.00 0.00 2.24
47 48 8.249638 ACTACTCCCTCGTTTCTAAAATAAGTC 58.750 37.037 0.00 0.00 0.00 3.01
48 49 7.001099 ACTCCCTCGTTTCTAAAATAAGTCA 57.999 36.000 0.00 0.00 0.00 3.41
49 50 7.621796 ACTCCCTCGTTTCTAAAATAAGTCAT 58.378 34.615 0.00 0.00 0.00 3.06
50 51 8.101419 ACTCCCTCGTTTCTAAAATAAGTCATT 58.899 33.333 0.00 0.00 0.00 2.57
51 52 8.857694 TCCCTCGTTTCTAAAATAAGTCATTT 57.142 30.769 0.00 0.00 38.54 2.32
52 53 9.292195 TCCCTCGTTTCTAAAATAAGTCATTTT 57.708 29.630 1.12 1.12 46.31 1.82
125 126 9.860650 AGAGTGTAGACTATAGATTCACTCATT 57.139 33.333 28.74 18.10 46.88 2.57
132 133 8.356657 AGACTATAGATTCACTCATTTTCTCCG 58.643 37.037 6.78 0.00 0.00 4.63
133 134 8.012957 ACTATAGATTCACTCATTTTCTCCGT 57.987 34.615 6.78 0.00 0.00 4.69
134 135 9.132923 ACTATAGATTCACTCATTTTCTCCGTA 57.867 33.333 6.78 0.00 0.00 4.02
136 137 8.824159 ATAGATTCACTCATTTTCTCCGTATG 57.176 34.615 0.00 0.00 0.00 2.39
137 138 6.644347 AGATTCACTCATTTTCTCCGTATGT 58.356 36.000 0.00 0.00 0.00 2.29
138 139 7.782049 AGATTCACTCATTTTCTCCGTATGTA 58.218 34.615 0.00 0.00 0.00 2.29
139 140 7.707035 AGATTCACTCATTTTCTCCGTATGTAC 59.293 37.037 0.00 0.00 0.00 2.90
140 141 6.525578 TCACTCATTTTCTCCGTATGTACT 57.474 37.500 0.00 0.00 0.00 2.73
141 142 6.561614 TCACTCATTTTCTCCGTATGTACTC 58.438 40.000 0.00 0.00 0.00 2.59
142 143 5.749109 CACTCATTTTCTCCGTATGTACTCC 59.251 44.000 0.00 0.00 0.00 3.85
143 144 5.421056 ACTCATTTTCTCCGTATGTACTCCA 59.579 40.000 0.00 0.00 0.00 3.86
144 145 6.098409 ACTCATTTTCTCCGTATGTACTCCAT 59.902 38.462 0.00 0.00 37.58 3.41
145 146 7.287005 ACTCATTTTCTCCGTATGTACTCCATA 59.713 37.037 0.00 0.00 34.86 2.74
164 165 6.779860 TCCATACTGGAATATCTAAAAGGGC 58.220 40.000 0.00 0.00 45.00 5.19
165 166 6.562608 TCCATACTGGAATATCTAAAAGGGCT 59.437 38.462 0.00 0.00 45.00 5.19
166 167 7.073725 TCCATACTGGAATATCTAAAAGGGCTT 59.926 37.037 0.00 0.00 45.00 4.35
167 168 8.383175 CCATACTGGAATATCTAAAAGGGCTTA 58.617 37.037 0.00 0.00 40.96 3.09
168 169 9.965902 CATACTGGAATATCTAAAAGGGCTTAT 57.034 33.333 0.00 0.00 0.00 1.73
234 236 3.323758 AAATACTCGCCGGCTGCCA 62.324 57.895 26.68 7.56 36.24 4.92
246 248 1.609208 GGCTGCCACGATTCCATAAT 58.391 50.000 15.17 0.00 0.00 1.28
291 293 2.813908 GGCACTGCCTTACCGTCG 60.814 66.667 13.28 0.00 46.69 5.12
292 294 2.260434 GCACTGCCTTACCGTCGA 59.740 61.111 0.00 0.00 0.00 4.20
293 295 2.092882 GCACTGCCTTACCGTCGAC 61.093 63.158 5.18 5.18 0.00 4.20
294 296 1.585006 CACTGCCTTACCGTCGACT 59.415 57.895 14.70 0.00 0.00 4.18
295 297 0.038526 CACTGCCTTACCGTCGACTT 60.039 55.000 14.70 2.72 0.00 3.01
296 298 0.243095 ACTGCCTTACCGTCGACTTC 59.757 55.000 14.70 0.00 0.00 3.01
297 299 0.458025 CTGCCTTACCGTCGACTTCC 60.458 60.000 14.70 0.00 0.00 3.46
298 300 1.180456 TGCCTTACCGTCGACTTCCA 61.180 55.000 14.70 0.00 0.00 3.53
299 301 0.175073 GCCTTACCGTCGACTTCCAT 59.825 55.000 14.70 0.00 0.00 3.41
300 302 1.922570 CCTTACCGTCGACTTCCATG 58.077 55.000 14.70 0.00 0.00 3.66
301 303 1.470979 CCTTACCGTCGACTTCCATGG 60.471 57.143 14.70 4.97 0.00 3.66
302 304 1.475280 CTTACCGTCGACTTCCATGGA 59.525 52.381 11.44 11.44 0.00 3.41
303 305 1.100510 TACCGTCGACTTCCATGGAG 58.899 55.000 15.53 11.69 0.00 3.86
304 306 0.611062 ACCGTCGACTTCCATGGAGA 60.611 55.000 15.53 5.89 0.00 3.71
305 307 0.530744 CCGTCGACTTCCATGGAGAA 59.469 55.000 15.53 0.00 0.00 2.87
306 308 1.067142 CCGTCGACTTCCATGGAGAAA 60.067 52.381 15.53 0.00 0.00 2.52
307 309 2.611971 CCGTCGACTTCCATGGAGAAAA 60.612 50.000 15.53 0.00 0.00 2.29
308 310 3.262420 CGTCGACTTCCATGGAGAAAAT 58.738 45.455 15.53 0.00 0.00 1.82
309 311 4.430007 CGTCGACTTCCATGGAGAAAATA 58.570 43.478 15.53 0.00 0.00 1.40
310 312 5.050490 CGTCGACTTCCATGGAGAAAATAT 58.950 41.667 15.53 0.00 0.00 1.28
311 313 5.175856 CGTCGACTTCCATGGAGAAAATATC 59.824 44.000 15.53 5.38 0.00 1.63
312 314 6.284459 GTCGACTTCCATGGAGAAAATATCT 58.716 40.000 15.53 0.00 42.61 1.98
313 315 6.763610 GTCGACTTCCATGGAGAAAATATCTT 59.236 38.462 15.53 0.00 38.96 2.40
314 316 6.986817 TCGACTTCCATGGAGAAAATATCTTC 59.013 38.462 15.53 0.29 38.96 2.87
325 327 9.440773 TGGAGAAAATATCTTCATCCGAATATG 57.559 33.333 0.00 0.00 38.84 1.78
326 328 8.887717 GGAGAAAATATCTTCATCCGAATATGG 58.112 37.037 0.00 0.00 38.96 2.74
327 329 8.273780 AGAAAATATCTTCATCCGAATATGGC 57.726 34.615 0.00 0.00 33.39 4.40
328 330 8.105829 AGAAAATATCTTCATCCGAATATGGCT 58.894 33.333 0.00 0.00 33.39 4.75
329 331 9.383519 GAAAATATCTTCATCCGAATATGGCTA 57.616 33.333 0.00 0.00 0.00 3.93
330 332 9.739276 AAAATATCTTCATCCGAATATGGCTAA 57.261 29.630 0.00 0.00 0.00 3.09
331 333 8.954950 AATATCTTCATCCGAATATGGCTAAG 57.045 34.615 0.00 0.00 0.00 2.18
332 334 5.152623 TCTTCATCCGAATATGGCTAAGG 57.847 43.478 0.00 0.00 0.00 2.69
333 335 4.838423 TCTTCATCCGAATATGGCTAAGGA 59.162 41.667 0.00 0.00 0.00 3.36
334 336 4.808414 TCATCCGAATATGGCTAAGGAG 57.192 45.455 0.00 0.00 0.00 3.69
335 337 4.160329 TCATCCGAATATGGCTAAGGAGT 58.840 43.478 0.00 0.00 0.00 3.85
336 338 5.330233 TCATCCGAATATGGCTAAGGAGTA 58.670 41.667 0.00 0.00 0.00 2.59
337 339 5.778241 TCATCCGAATATGGCTAAGGAGTAA 59.222 40.000 0.00 0.00 0.00 2.24
338 340 5.723672 TCCGAATATGGCTAAGGAGTAAG 57.276 43.478 0.00 0.00 0.00 2.34
339 341 4.527038 TCCGAATATGGCTAAGGAGTAAGG 59.473 45.833 0.00 0.00 0.00 2.69
340 342 4.527038 CCGAATATGGCTAAGGAGTAAGGA 59.473 45.833 0.00 0.00 0.00 3.36
341 343 5.471257 CGAATATGGCTAAGGAGTAAGGAC 58.529 45.833 0.00 0.00 0.00 3.85
342 344 5.010719 CGAATATGGCTAAGGAGTAAGGACA 59.989 44.000 0.00 0.00 0.00 4.02
343 345 6.295349 CGAATATGGCTAAGGAGTAAGGACAT 60.295 42.308 0.00 0.00 0.00 3.06
344 346 4.965200 ATGGCTAAGGAGTAAGGACATC 57.035 45.455 0.00 0.00 0.00 3.06
345 347 3.719871 TGGCTAAGGAGTAAGGACATCA 58.280 45.455 0.00 0.00 0.00 3.07
346 348 4.101114 TGGCTAAGGAGTAAGGACATCAA 58.899 43.478 0.00 0.00 0.00 2.57
347 349 4.534500 TGGCTAAGGAGTAAGGACATCAAA 59.466 41.667 0.00 0.00 0.00 2.69
348 350 5.119694 GGCTAAGGAGTAAGGACATCAAAG 58.880 45.833 0.00 0.00 0.00 2.77
349 351 5.119694 GCTAAGGAGTAAGGACATCAAAGG 58.880 45.833 0.00 0.00 0.00 3.11
350 352 5.104900 GCTAAGGAGTAAGGACATCAAAGGA 60.105 44.000 0.00 0.00 0.00 3.36
351 353 5.843019 AAGGAGTAAGGACATCAAAGGAA 57.157 39.130 0.00 0.00 0.00 3.36
352 354 5.167303 AGGAGTAAGGACATCAAAGGAAC 57.833 43.478 0.00 0.00 0.00 3.62
354 356 4.938226 GGAGTAAGGACATCAAAGGAACTG 59.062 45.833 0.00 0.00 40.86 3.16
355 357 5.513267 GGAGTAAGGACATCAAAGGAACTGT 60.513 44.000 0.00 0.00 40.86 3.55
356 358 6.295688 GGAGTAAGGACATCAAAGGAACTGTA 60.296 42.308 0.00 0.00 40.86 2.74
357 359 6.465084 AGTAAGGACATCAAAGGAACTGTAC 58.535 40.000 0.00 0.00 40.86 2.90
358 360 5.568620 AAGGACATCAAAGGAACTGTACT 57.431 39.130 0.00 0.00 40.86 2.73
359 361 6.681729 AAGGACATCAAAGGAACTGTACTA 57.318 37.500 0.00 0.00 40.86 1.82
360 362 6.681729 AGGACATCAAAGGAACTGTACTAA 57.318 37.500 0.00 0.00 40.86 2.24
361 363 6.465084 AGGACATCAAAGGAACTGTACTAAC 58.535 40.000 0.00 0.00 40.86 2.34
362 364 6.042781 AGGACATCAAAGGAACTGTACTAACA 59.957 38.462 0.00 0.00 40.86 2.41
363 365 6.147328 GGACATCAAAGGAACTGTACTAACAC 59.853 42.308 0.00 0.00 40.86 3.32
364 366 5.995897 ACATCAAAGGAACTGTACTAACACC 59.004 40.000 0.00 0.00 40.86 4.16
365 367 5.881923 TCAAAGGAACTGTACTAACACCT 57.118 39.130 0.00 0.00 40.86 4.00
366 368 5.850614 TCAAAGGAACTGTACTAACACCTC 58.149 41.667 0.00 0.00 40.86 3.85
367 369 4.886496 AAGGAACTGTACTAACACCTCC 57.114 45.455 0.00 0.00 40.86 4.30
368 370 4.129317 AGGAACTGTACTAACACCTCCT 57.871 45.455 0.00 0.00 37.03 3.69
369 371 3.833070 AGGAACTGTACTAACACCTCCTG 59.167 47.826 0.00 0.00 38.97 3.86
370 372 3.830755 GGAACTGTACTAACACCTCCTGA 59.169 47.826 0.00 0.00 32.15 3.86
371 373 4.282703 GGAACTGTACTAACACCTCCTGAA 59.717 45.833 0.00 0.00 32.15 3.02
372 374 5.046520 GGAACTGTACTAACACCTCCTGAAT 60.047 44.000 0.00 0.00 32.15 2.57
373 375 5.662674 ACTGTACTAACACCTCCTGAATC 57.337 43.478 0.00 0.00 0.00 2.52
374 376 5.084519 ACTGTACTAACACCTCCTGAATCA 58.915 41.667 0.00 0.00 0.00 2.57
375 377 5.186021 ACTGTACTAACACCTCCTGAATCAG 59.814 44.000 2.68 2.68 0.00 2.90
376 378 5.084519 TGTACTAACACCTCCTGAATCAGT 58.915 41.667 9.63 0.00 0.00 3.41
377 379 4.543590 ACTAACACCTCCTGAATCAGTG 57.456 45.455 9.63 4.26 34.61 3.66
378 380 4.160329 ACTAACACCTCCTGAATCAGTGA 58.840 43.478 9.63 0.00 32.76 3.41
379 381 4.593206 ACTAACACCTCCTGAATCAGTGAA 59.407 41.667 9.63 0.00 32.76 3.18
380 382 4.437682 AACACCTCCTGAATCAGTGAAA 57.562 40.909 9.63 0.00 32.76 2.69
381 383 4.437682 ACACCTCCTGAATCAGTGAAAA 57.562 40.909 9.63 0.00 32.76 2.29
382 384 4.990526 ACACCTCCTGAATCAGTGAAAAT 58.009 39.130 9.63 0.00 32.76 1.82
383 385 5.388654 ACACCTCCTGAATCAGTGAAAATT 58.611 37.500 9.63 0.00 32.76 1.82
384 386 6.542821 ACACCTCCTGAATCAGTGAAAATTA 58.457 36.000 9.63 0.00 32.76 1.40
385 387 7.177878 ACACCTCCTGAATCAGTGAAAATTAT 58.822 34.615 9.63 0.00 32.76 1.28
386 388 7.121759 ACACCTCCTGAATCAGTGAAAATTATG 59.878 37.037 9.63 0.00 32.76 1.90
387 389 7.337689 CACCTCCTGAATCAGTGAAAATTATGA 59.662 37.037 9.63 0.00 0.00 2.15
388 390 7.555554 ACCTCCTGAATCAGTGAAAATTATGAG 59.444 37.037 9.63 4.51 0.00 2.90
389 391 7.772292 CCTCCTGAATCAGTGAAAATTATGAGA 59.228 37.037 9.63 0.00 0.00 3.27
390 392 9.339850 CTCCTGAATCAGTGAAAATTATGAGAT 57.660 33.333 9.63 0.00 0.00 2.75
391 393 9.334947 TCCTGAATCAGTGAAAATTATGAGATC 57.665 33.333 9.63 0.00 0.00 2.75
392 394 8.566260 CCTGAATCAGTGAAAATTATGAGATCC 58.434 37.037 9.63 0.00 0.00 3.36
393 395 9.339850 CTGAATCAGTGAAAATTATGAGATCCT 57.660 33.333 1.31 0.00 0.00 3.24
397 399 9.775854 ATCAGTGAAAATTATGAGATCCTACTG 57.224 33.333 0.00 0.00 33.79 2.74
398 400 8.206867 TCAGTGAAAATTATGAGATCCTACTGG 58.793 37.037 0.00 0.00 33.44 4.00
399 401 7.443575 CAGTGAAAATTATGAGATCCTACTGGG 59.556 40.741 0.00 0.00 0.00 4.45
400 402 6.712547 GTGAAAATTATGAGATCCTACTGGGG 59.287 42.308 0.00 0.00 35.33 4.96
401 403 6.389869 TGAAAATTATGAGATCCTACTGGGGT 59.610 38.462 0.00 0.00 35.33 4.95
402 404 7.570982 TGAAAATTATGAGATCCTACTGGGGTA 59.429 37.037 0.00 0.00 35.33 3.69
403 405 7.947782 AAATTATGAGATCCTACTGGGGTAA 57.052 36.000 0.00 0.00 35.33 2.85
404 406 7.947782 AATTATGAGATCCTACTGGGGTAAA 57.052 36.000 0.00 0.00 35.33 2.01
405 407 7.947782 ATTATGAGATCCTACTGGGGTAAAA 57.052 36.000 0.00 0.00 35.33 1.52
406 408 7.758820 TTATGAGATCCTACTGGGGTAAAAA 57.241 36.000 0.00 0.00 35.33 1.94
407 409 6.848562 ATGAGATCCTACTGGGGTAAAAAT 57.151 37.500 0.00 0.00 35.33 1.82
408 410 6.248569 TGAGATCCTACTGGGGTAAAAATC 57.751 41.667 0.00 0.00 35.33 2.17
409 411 5.970640 TGAGATCCTACTGGGGTAAAAATCT 59.029 40.000 0.00 0.00 35.33 2.40
410 412 6.099845 TGAGATCCTACTGGGGTAAAAATCTC 59.900 42.308 0.00 0.00 37.54 2.75
411 413 6.213525 AGATCCTACTGGGGTAAAAATCTCT 58.786 40.000 0.00 0.00 35.33 3.10
412 414 7.371043 AGATCCTACTGGGGTAAAAATCTCTA 58.629 38.462 0.00 0.00 35.33 2.43
413 415 7.511028 AGATCCTACTGGGGTAAAAATCTCTAG 59.489 40.741 0.00 0.00 35.33 2.43
414 416 5.365895 TCCTACTGGGGTAAAAATCTCTAGC 59.634 44.000 0.00 0.00 35.33 3.42
415 417 4.138487 ACTGGGGTAAAAATCTCTAGCG 57.862 45.455 0.00 0.00 0.00 4.26
416 418 3.773119 ACTGGGGTAAAAATCTCTAGCGA 59.227 43.478 0.00 0.00 0.00 4.93
417 419 4.224370 ACTGGGGTAAAAATCTCTAGCGAA 59.776 41.667 0.00 0.00 0.00 4.70
418 420 5.168647 TGGGGTAAAAATCTCTAGCGAAA 57.831 39.130 0.00 0.00 0.00 3.46
419 421 5.751586 TGGGGTAAAAATCTCTAGCGAAAT 58.248 37.500 0.00 0.00 0.00 2.17
420 422 6.891388 TGGGGTAAAAATCTCTAGCGAAATA 58.109 36.000 0.00 0.00 0.00 1.40
421 423 7.514721 TGGGGTAAAAATCTCTAGCGAAATAT 58.485 34.615 0.00 0.00 0.00 1.28
422 424 7.444183 TGGGGTAAAAATCTCTAGCGAAATATG 59.556 37.037 0.00 0.00 0.00 1.78
423 425 7.444487 GGGGTAAAAATCTCTAGCGAAATATGT 59.556 37.037 0.00 0.00 0.00 2.29
424 426 8.496751 GGGTAAAAATCTCTAGCGAAATATGTC 58.503 37.037 0.00 0.00 0.00 3.06
425 427 9.042008 GGTAAAAATCTCTAGCGAAATATGTCA 57.958 33.333 0.00 0.00 0.00 3.58
428 430 8.948631 AAAATCTCTAGCGAAATATGTCAAGA 57.051 30.769 0.00 0.00 0.00 3.02
429 431 8.948631 AAATCTCTAGCGAAATATGTCAAGAA 57.051 30.769 0.00 0.00 0.00 2.52
430 432 7.938563 ATCTCTAGCGAAATATGTCAAGAAC 57.061 36.000 0.00 0.00 0.00 3.01
431 433 6.273825 TCTCTAGCGAAATATGTCAAGAACC 58.726 40.000 0.00 0.00 0.00 3.62
432 434 5.357257 TCTAGCGAAATATGTCAAGAACCC 58.643 41.667 0.00 0.00 0.00 4.11
433 435 4.222124 AGCGAAATATGTCAAGAACCCT 57.778 40.909 0.00 0.00 0.00 4.34
434 436 5.353394 AGCGAAATATGTCAAGAACCCTA 57.647 39.130 0.00 0.00 0.00 3.53
435 437 5.930135 AGCGAAATATGTCAAGAACCCTAT 58.070 37.500 0.00 0.00 0.00 2.57
436 438 7.062749 AGCGAAATATGTCAAGAACCCTATA 57.937 36.000 0.00 0.00 0.00 1.31
437 439 7.506114 AGCGAAATATGTCAAGAACCCTATAA 58.494 34.615 0.00 0.00 0.00 0.98
438 440 7.990886 AGCGAAATATGTCAAGAACCCTATAAA 59.009 33.333 0.00 0.00 0.00 1.40
439 441 8.617809 GCGAAATATGTCAAGAACCCTATAAAA 58.382 33.333 0.00 0.00 0.00 1.52
449 451 8.402472 TCAAGAACCCTATAAAAATAACATGCG 58.598 33.333 0.00 0.00 0.00 4.73
452 454 8.403236 AGAACCCTATAAAAATAACATGCGAAC 58.597 33.333 0.00 0.00 0.00 3.95
455 457 7.121463 ACCCTATAAAAATAACATGCGAACACA 59.879 33.333 0.00 0.00 0.00 3.72
463 465 0.109827 CATGCGAACACATGCGGAAA 60.110 50.000 0.00 0.00 40.89 3.13
464 466 0.109781 ATGCGAACACATGCGGAAAC 60.110 50.000 0.00 0.00 0.00 2.78
467 469 0.725784 CGAACACATGCGGAAACAGC 60.726 55.000 0.00 0.00 0.00 4.40
476 478 3.347958 TGCGGAAACAGCAGTAAAAAG 57.652 42.857 0.00 0.00 40.01 2.27
478 480 2.307049 CGGAAACAGCAGTAAAAAGCG 58.693 47.619 0.00 0.00 35.48 4.68
481 483 2.405892 AACAGCAGTAAAAAGCGCAG 57.594 45.000 11.47 0.00 35.48 5.18
483 485 2.154462 ACAGCAGTAAAAAGCGCAGAT 58.846 42.857 11.47 0.00 35.48 2.90
484 486 3.334691 ACAGCAGTAAAAAGCGCAGATA 58.665 40.909 11.47 0.00 35.48 1.98
485 487 3.751175 ACAGCAGTAAAAAGCGCAGATAA 59.249 39.130 11.47 0.00 35.48 1.75
487 489 5.106157 ACAGCAGTAAAAAGCGCAGATAATT 60.106 36.000 11.47 0.00 35.48 1.40
488 490 5.801947 CAGCAGTAAAAAGCGCAGATAATTT 59.198 36.000 11.47 0.00 35.48 1.82
490 492 5.053025 GCAGTAAAAAGCGCAGATAATTTCG 60.053 40.000 11.47 0.00 0.00 3.46
494 496 3.916061 GCGCAGATAATTTCGCCAA 57.084 47.368 0.30 0.00 41.53 4.52
495 497 1.746760 GCGCAGATAATTTCGCCAAG 58.253 50.000 0.30 0.00 41.53 3.61
496 498 1.330521 GCGCAGATAATTTCGCCAAGA 59.669 47.619 0.30 0.00 41.53 3.02
528 530 7.745620 AATTCTCTCCAACGAAAAACTACAT 57.254 32.000 0.00 0.00 0.00 2.29
537 539 8.500773 TCCAACGAAAAACTACATAAAGACATC 58.499 33.333 0.00 0.00 0.00 3.06
541 543 8.504005 ACGAAAAACTACATAAAGACATCCAAG 58.496 33.333 0.00 0.00 0.00 3.61
547 549 9.739276 AACTACATAAAGACATCCAAGAAATGA 57.261 29.630 0.00 0.00 0.00 2.57
567 569 4.401022 TGAGTGCTCCTCATGATGTTTTT 58.599 39.130 0.00 0.00 45.34 1.94
568 570 4.456911 TGAGTGCTCCTCATGATGTTTTTC 59.543 41.667 0.00 0.00 45.34 2.29
572 574 6.014840 AGTGCTCCTCATGATGTTTTTCAATT 60.015 34.615 0.00 0.00 0.00 2.32
577 579 8.296799 TCCTCATGATGTTTTTCAATTTTTCG 57.703 30.769 0.00 0.00 0.00 3.46
578 580 7.925483 TCCTCATGATGTTTTTCAATTTTTCGT 59.075 29.630 0.00 0.00 0.00 3.85
579 581 8.550376 CCTCATGATGTTTTTCAATTTTTCGTT 58.450 29.630 0.00 0.00 0.00 3.85
580 582 9.571804 CTCATGATGTTTTTCAATTTTTCGTTC 57.428 29.630 0.00 0.00 0.00 3.95
581 583 9.311916 TCATGATGTTTTTCAATTTTTCGTTCT 57.688 25.926 0.00 0.00 0.00 3.01
589 591 9.695884 TTTTTCAATTTTTCGTTCTAACAATGC 57.304 25.926 0.00 0.00 0.00 3.56
590 592 8.641499 TTTCAATTTTTCGTTCTAACAATGCT 57.359 26.923 0.00 0.00 0.00 3.79
591 593 7.621832 TCAATTTTTCGTTCTAACAATGCTG 57.378 32.000 0.00 0.00 0.00 4.41
592 594 7.199766 TCAATTTTTCGTTCTAACAATGCTGT 58.800 30.769 0.00 0.00 37.39 4.40
594 596 8.327429 CAATTTTTCGTTCTAACAATGCTGTTT 58.673 29.630 0.00 0.00 43.45 2.83
595 597 7.820044 TTTTTCGTTCTAACAATGCTGTTTT 57.180 28.000 0.00 0.00 43.45 2.43
596 598 7.444558 TTTTCGTTCTAACAATGCTGTTTTC 57.555 32.000 0.00 0.00 43.45 2.29
597 599 5.743026 TCGTTCTAACAATGCTGTTTTCA 57.257 34.783 0.00 0.00 43.45 2.69
598 600 6.125327 TCGTTCTAACAATGCTGTTTTCAA 57.875 33.333 0.00 0.00 43.45 2.69
599 601 6.556212 TCGTTCTAACAATGCTGTTTTCAAA 58.444 32.000 0.00 0.00 43.45 2.69
600 602 7.199766 TCGTTCTAACAATGCTGTTTTCAAAT 58.800 30.769 0.00 0.00 43.45 2.32
601 603 7.167302 TCGTTCTAACAATGCTGTTTTCAAATG 59.833 33.333 0.00 0.00 43.45 2.32
602 604 7.043458 CGTTCTAACAATGCTGTTTTCAAATGT 60.043 33.333 0.00 0.00 43.45 2.71
603 605 8.603181 GTTCTAACAATGCTGTTTTCAAATGTT 58.397 29.630 0.00 0.00 43.45 2.71
604 606 8.715191 TCTAACAATGCTGTTTTCAAATGTTT 57.285 26.923 0.00 0.00 43.45 2.83
665 667 3.446442 AGACTTGGTTGCTTCCATGAT 57.554 42.857 16.01 5.87 37.33 2.45
708 735 5.955959 TGGGACTAGCTGTAACAAATAGAGA 59.044 40.000 0.00 0.00 0.00 3.10
723 755 9.436957 AACAAATAGAGAAGTGTACAATACTGG 57.563 33.333 0.00 0.00 0.00 4.00
726 758 4.822026 AGAGAAGTGTACAATACTGGCAC 58.178 43.478 0.00 0.00 34.65 5.01
835 867 2.496070 TCTCGTCGTCCCATTTGATCTT 59.504 45.455 0.00 0.00 0.00 2.40
856 898 3.616956 TGGATCACAGTAGCCAAGAAG 57.383 47.619 0.00 0.00 0.00 2.85
860 902 2.889512 TCACAGTAGCCAAGAAGAGGA 58.110 47.619 0.00 0.00 0.00 3.71
862 904 3.006967 TCACAGTAGCCAAGAAGAGGAAC 59.993 47.826 0.00 0.00 0.00 3.62
884 931 2.042464 ACACCTGCTGAGACTTGAGAA 58.958 47.619 0.00 0.00 0.00 2.87
947 1006 1.078848 ACGTCCAGCAAGCATCTCC 60.079 57.895 0.00 0.00 0.00 3.71
991 1050 2.177594 CTCCCAGCAAGCTTCTCCGT 62.178 60.000 0.00 0.00 0.00 4.69
1097 1156 4.521292 GGCAATGGATCCCGGCCA 62.521 66.667 25.40 1.43 44.01 5.36
1100 1159 3.407967 AATGGATCCCGGCCACGT 61.408 61.111 9.90 0.00 38.44 4.49
1579 1638 1.211969 GCCGTCTTGCTCTACGTCA 59.788 57.895 0.00 0.00 37.40 4.35
1731 2123 1.074405 TGCAAGGTCCTGATGCTTCTT 59.926 47.619 15.14 0.00 40.66 2.52
2123 2527 2.414293 GCTTCTGCAGTTCAGCATCAAG 60.414 50.000 22.37 13.51 44.68 3.02
2134 2538 7.431668 GCAGTTCAGCATCAAGATTATTTTCTC 59.568 37.037 0.00 0.00 0.00 2.87
2158 2574 5.626543 CGTTGTTTCAGTCCTGATGAAAATG 59.373 40.000 2.92 0.00 45.48 2.32
2217 2652 7.475015 CACTGTTTCTTTCATTCTCTGAAACA 58.525 34.615 15.55 15.55 46.45 2.83
2465 3000 1.993370 CGATTCTCCTCACAACGAACC 59.007 52.381 0.00 0.00 0.00 3.62
2608 3143 1.207089 CTCGTCCTGTTTGGCCTCATA 59.793 52.381 3.32 0.00 35.26 2.15
2620 3155 1.006220 CCTCATAGGCGCGTATGCA 60.006 57.895 34.18 24.39 42.97 3.96
2748 3289 4.116747 AGGACAAGAAAGACGATGCTAG 57.883 45.455 0.00 0.00 0.00 3.42
2836 3377 2.925706 TACCAAGCCGGCCTCACA 60.926 61.111 26.15 2.56 39.03 3.58
3083 3634 1.558167 TTTGATGGGAGCCTACGCCA 61.558 55.000 0.00 0.00 37.52 5.69
3239 4045 2.492088 GCACCCATTAAACAGAAGGACC 59.508 50.000 0.00 0.00 0.00 4.46
3788 4677 4.226384 TGGTGTAGCTCCACTATCATGAT 58.774 43.478 13.81 13.81 35.63 2.45
3897 4853 4.168883 AGGTAGCTCTCCCTGTTTTTAGT 58.831 43.478 0.00 0.00 0.00 2.24
4035 11866 4.624882 GTGTGCACTCTGTCTCATAAGAAG 59.375 45.833 19.41 0.00 31.93 2.85
4096 11961 6.707440 TTCCAGAAACTGAAGCATTTGTTA 57.293 33.333 0.00 0.00 32.44 2.41
4137 12126 5.779922 TGTGTCATTAGGTACAGTCTGAAC 58.220 41.667 6.91 0.00 0.00 3.18
4138 12127 5.538813 TGTGTCATTAGGTACAGTCTGAACT 59.461 40.000 6.91 4.08 35.60 3.01
4139 12128 6.717997 TGTGTCATTAGGTACAGTCTGAACTA 59.282 38.462 6.91 3.12 33.25 2.24
4140 12129 7.028361 GTGTCATTAGGTACAGTCTGAACTAC 58.972 42.308 6.91 0.00 33.25 2.73
4141 12130 6.152323 TGTCATTAGGTACAGTCTGAACTACC 59.848 42.308 6.91 8.34 35.25 3.18
4334 12435 2.283101 AGCTGGCGCCATTTTGGA 60.283 55.556 32.87 4.54 40.96 3.53
4414 12515 3.120385 CAGGTGCTGCGCGAATCA 61.120 61.111 12.10 0.00 0.00 2.57
4605 12731 2.505118 GCGGCTCTGTCTCGTGTC 60.505 66.667 0.00 0.00 0.00 3.67
4610 12736 0.040336 GCTCTGTCTCGTGTCGACAA 60.040 55.000 21.95 4.55 40.53 3.18
4611 12737 1.957089 CTCTGTCTCGTGTCGACAAG 58.043 55.000 21.95 22.70 40.53 3.16
4612 12738 0.040336 TCTGTCTCGTGTCGACAAGC 60.040 55.000 24.25 11.04 40.53 4.01
4613 12739 0.039978 CTGTCTCGTGTCGACAAGCT 60.040 55.000 24.25 0.00 40.53 3.74
4614 12740 0.317854 TGTCTCGTGTCGACAAGCTG 60.318 55.000 24.25 18.66 38.36 4.24
4615 12741 1.004277 GTCTCGTGTCGACAAGCTGG 61.004 60.000 24.25 16.46 0.00 4.85
4616 12742 1.170290 TCTCGTGTCGACAAGCTGGA 61.170 55.000 24.25 18.14 0.00 3.86
4617 12743 1.004277 CTCGTGTCGACAAGCTGGAC 61.004 60.000 24.25 8.18 0.00 4.02
4618 12744 2.365068 CGTGTCGACAAGCTGGACG 61.365 63.158 21.95 13.85 33.45 4.79
4619 12745 2.355837 TGTCGACAAGCTGGACGC 60.356 61.111 17.62 4.51 39.57 5.19
4620 12746 3.470567 GTCGACAAGCTGGACGCG 61.471 66.667 11.55 3.53 45.59 6.01
4621 12747 4.717629 TCGACAAGCTGGACGCGG 62.718 66.667 12.47 0.00 45.59 6.46
4623 12749 4.681978 GACAAGCTGGACGCGGGT 62.682 66.667 12.47 4.12 45.59 5.28
4624 12750 3.291101 GACAAGCTGGACGCGGGTA 62.291 63.158 12.47 0.00 45.59 3.69
4625 12751 2.509336 CAAGCTGGACGCGGGTAG 60.509 66.667 12.47 6.21 45.59 3.18
4626 12752 2.995574 AAGCTGGACGCGGGTAGT 60.996 61.111 12.47 0.00 45.59 2.73
4627 12753 2.580601 AAGCTGGACGCGGGTAGTT 61.581 57.895 12.47 0.00 45.59 2.24
4628 12754 2.502692 AAGCTGGACGCGGGTAGTTC 62.503 60.000 12.47 0.00 45.59 3.01
4629 12755 3.003113 GCTGGACGCGGGTAGTTCT 62.003 63.158 12.47 0.00 0.00 3.01
4630 12756 1.590147 CTGGACGCGGGTAGTTCTT 59.410 57.895 12.47 0.00 0.00 2.52
4631 12757 0.458025 CTGGACGCGGGTAGTTCTTC 60.458 60.000 12.47 0.00 0.00 2.87
4632 12758 0.896940 TGGACGCGGGTAGTTCTTCT 60.897 55.000 12.47 0.00 0.00 2.85
4633 12759 0.245813 GGACGCGGGTAGTTCTTCTT 59.754 55.000 12.47 0.00 0.00 2.52
4634 12760 1.337541 GGACGCGGGTAGTTCTTCTTT 60.338 52.381 12.47 0.00 0.00 2.52
4635 12761 2.410939 GACGCGGGTAGTTCTTCTTTT 58.589 47.619 12.47 0.00 0.00 2.27
4636 12762 3.578688 GACGCGGGTAGTTCTTCTTTTA 58.421 45.455 12.47 0.00 0.00 1.52
4637 12763 3.320626 ACGCGGGTAGTTCTTCTTTTAC 58.679 45.455 12.47 0.00 0.00 2.01
4638 12764 3.006217 ACGCGGGTAGTTCTTCTTTTACT 59.994 43.478 12.47 0.00 0.00 2.24
4639 12765 4.218417 ACGCGGGTAGTTCTTCTTTTACTA 59.782 41.667 12.47 0.00 0.00 1.82
4640 12766 5.163513 CGCGGGTAGTTCTTCTTTTACTAA 58.836 41.667 0.00 0.00 0.00 2.24
4641 12767 5.809051 CGCGGGTAGTTCTTCTTTTACTAAT 59.191 40.000 0.00 0.00 0.00 1.73
4642 12768 6.312180 CGCGGGTAGTTCTTCTTTTACTAATT 59.688 38.462 0.00 0.00 0.00 1.40
4643 12769 7.489113 CGCGGGTAGTTCTTCTTTTACTAATTA 59.511 37.037 0.00 0.00 0.00 1.40
4644 12770 9.154847 GCGGGTAGTTCTTCTTTTACTAATTAA 57.845 33.333 0.00 0.00 0.00 1.40
4655 12781 9.947433 TTCTTTTACTAATTAATCTCAACCGGA 57.053 29.630 9.46 0.00 0.00 5.14
4656 12782 9.595823 TCTTTTACTAATTAATCTCAACCGGAG 57.404 33.333 9.46 0.00 45.49 4.63
4657 12783 7.781548 TTTACTAATTAATCTCAACCGGAGC 57.218 36.000 9.46 0.00 43.70 4.70
4658 12784 5.353394 ACTAATTAATCTCAACCGGAGCA 57.647 39.130 9.46 0.00 43.70 4.26
4659 12785 5.741011 ACTAATTAATCTCAACCGGAGCAA 58.259 37.500 9.46 0.00 43.70 3.91
4660 12786 4.965119 AATTAATCTCAACCGGAGCAAC 57.035 40.909 9.46 0.00 43.70 4.17
4661 12787 3.410631 TTAATCTCAACCGGAGCAACA 57.589 42.857 9.46 0.00 43.70 3.33
4662 12788 2.270352 AATCTCAACCGGAGCAACAA 57.730 45.000 9.46 0.00 43.70 2.83
4663 12789 2.270352 ATCTCAACCGGAGCAACAAA 57.730 45.000 9.46 0.00 43.70 2.83
4664 12790 1.305201 TCTCAACCGGAGCAACAAAC 58.695 50.000 9.46 0.00 43.70 2.93
4665 12791 0.310854 CTCAACCGGAGCAACAAACC 59.689 55.000 9.46 0.00 36.69 3.27
4666 12792 0.106918 TCAACCGGAGCAACAAACCT 60.107 50.000 9.46 0.00 0.00 3.50
4667 12793 0.744281 CAACCGGAGCAACAAACCTT 59.256 50.000 9.46 0.00 0.00 3.50
4668 12794 1.136110 CAACCGGAGCAACAAACCTTT 59.864 47.619 9.46 0.00 0.00 3.11
4669 12795 1.480789 ACCGGAGCAACAAACCTTTT 58.519 45.000 9.46 0.00 0.00 2.27
4670 12796 1.828595 ACCGGAGCAACAAACCTTTTT 59.171 42.857 9.46 0.00 0.00 1.94
4671 12797 3.025262 ACCGGAGCAACAAACCTTTTTA 58.975 40.909 9.46 0.00 0.00 1.52
4672 12798 3.639561 ACCGGAGCAACAAACCTTTTTAT 59.360 39.130 9.46 0.00 0.00 1.40
4673 12799 4.100344 ACCGGAGCAACAAACCTTTTTATT 59.900 37.500 9.46 0.00 0.00 1.40
4674 12800 4.684242 CCGGAGCAACAAACCTTTTTATTC 59.316 41.667 0.00 0.00 0.00 1.75
4675 12801 4.381566 CGGAGCAACAAACCTTTTTATTCG 59.618 41.667 0.00 0.00 0.00 3.34
4676 12802 5.286438 GGAGCAACAAACCTTTTTATTCGT 58.714 37.500 0.00 0.00 0.00 3.85
4677 12803 5.174943 GGAGCAACAAACCTTTTTATTCGTG 59.825 40.000 0.00 0.00 0.00 4.35
4678 12804 5.897050 AGCAACAAACCTTTTTATTCGTGA 58.103 33.333 0.00 0.00 0.00 4.35
4679 12805 5.977129 AGCAACAAACCTTTTTATTCGTGAG 59.023 36.000 0.00 0.00 0.00 3.51
4680 12806 5.174943 GCAACAAACCTTTTTATTCGTGAGG 59.825 40.000 0.00 0.00 0.00 3.86
4681 12807 6.270064 CAACAAACCTTTTTATTCGTGAGGT 58.730 36.000 0.00 0.00 42.29 3.85
4682 12808 7.419204 CAACAAACCTTTTTATTCGTGAGGTA 58.581 34.615 0.00 0.00 39.71 3.08
4683 12809 7.571080 ACAAACCTTTTTATTCGTGAGGTAA 57.429 32.000 0.00 0.00 39.71 2.85
4684 12810 8.173542 ACAAACCTTTTTATTCGTGAGGTAAT 57.826 30.769 0.00 0.00 39.71 1.89
4685 12811 9.287373 ACAAACCTTTTTATTCGTGAGGTAATA 57.713 29.630 0.00 0.00 39.71 0.98
4688 12814 8.851541 ACCTTTTTATTCGTGAGGTAATAACA 57.148 30.769 0.00 0.00 38.88 2.41
4689 12815 8.724229 ACCTTTTTATTCGTGAGGTAATAACAC 58.276 33.333 0.00 0.00 38.88 3.32
4690 12816 8.943002 CCTTTTTATTCGTGAGGTAATAACACT 58.057 33.333 0.00 0.00 29.58 3.55
4694 12820 9.577110 TTTATTCGTGAGGTAATAACACTAGTG 57.423 33.333 21.44 21.44 29.58 2.74
4695 12821 5.571784 TCGTGAGGTAATAACACTAGTGG 57.428 43.478 26.12 9.07 33.13 4.00
4696 12822 5.012239 TCGTGAGGTAATAACACTAGTGGT 58.988 41.667 26.12 22.89 33.13 4.16
4708 12834 2.484264 CACTAGTGGTGCCTAAACTTGC 59.516 50.000 15.49 0.00 39.22 4.01
4709 12835 2.084546 CTAGTGGTGCCTAAACTTGCC 58.915 52.381 0.00 0.00 0.00 4.52
4710 12836 0.184933 AGTGGTGCCTAAACTTGCCA 59.815 50.000 0.00 0.00 0.00 4.92
4711 12837 1.203050 AGTGGTGCCTAAACTTGCCAT 60.203 47.619 0.00 0.00 0.00 4.40
4712 12838 1.202348 GTGGTGCCTAAACTTGCCATC 59.798 52.381 0.00 0.00 0.00 3.51
4713 12839 0.451783 GGTGCCTAAACTTGCCATCG 59.548 55.000 0.00 0.00 0.00 3.84
4714 12840 1.448985 GTGCCTAAACTTGCCATCGA 58.551 50.000 0.00 0.00 0.00 3.59
4715 12841 2.017049 GTGCCTAAACTTGCCATCGAT 58.983 47.619 0.00 0.00 0.00 3.59
4716 12842 2.016318 TGCCTAAACTTGCCATCGATG 58.984 47.619 18.76 18.76 0.00 3.84
4717 12843 2.017049 GCCTAAACTTGCCATCGATGT 58.983 47.619 23.27 6.18 0.00 3.06
4718 12844 2.423538 GCCTAAACTTGCCATCGATGTT 59.576 45.455 23.27 12.42 0.00 2.71
4719 12845 3.487544 GCCTAAACTTGCCATCGATGTTC 60.488 47.826 23.27 14.87 0.00 3.18
4720 12846 3.689161 CCTAAACTTGCCATCGATGTTCA 59.311 43.478 23.27 17.13 0.00 3.18
4721 12847 3.559238 AAACTTGCCATCGATGTTCAC 57.441 42.857 23.27 10.67 0.00 3.18
4722 12848 2.479566 ACTTGCCATCGATGTTCACT 57.520 45.000 23.27 6.56 0.00 3.41
4723 12849 2.783135 ACTTGCCATCGATGTTCACTT 58.217 42.857 23.27 7.83 0.00 3.16
4724 12850 3.149196 ACTTGCCATCGATGTTCACTTT 58.851 40.909 23.27 5.70 0.00 2.66
4725 12851 3.058016 ACTTGCCATCGATGTTCACTTTG 60.058 43.478 23.27 7.11 0.00 2.77
4726 12852 1.811965 TGCCATCGATGTTCACTTTGG 59.188 47.619 23.27 8.05 0.00 3.28
4727 12853 1.812571 GCCATCGATGTTCACTTTGGT 59.187 47.619 23.27 0.00 0.00 3.67
4728 12854 2.414559 GCCATCGATGTTCACTTTGGTG 60.415 50.000 23.27 5.22 44.23 4.17
4729 12855 2.414559 CCATCGATGTTCACTTTGGTGC 60.415 50.000 23.27 0.00 42.72 5.01
4730 12856 1.234821 TCGATGTTCACTTTGGTGCC 58.765 50.000 0.00 0.00 42.72 5.01
4731 12857 1.202758 TCGATGTTCACTTTGGTGCCT 60.203 47.619 0.00 0.00 42.72 4.75
4732 12858 1.069022 CGATGTTCACTTTGGTGCCTG 60.069 52.381 0.00 0.00 42.72 4.85
4733 12859 2.229792 GATGTTCACTTTGGTGCCTGA 58.770 47.619 0.00 0.00 42.72 3.86
4734 12860 2.136298 TGTTCACTTTGGTGCCTGAA 57.864 45.000 0.00 0.00 42.72 3.02
4735 12861 1.748493 TGTTCACTTTGGTGCCTGAAC 59.252 47.619 11.71 11.71 42.72 3.18
4736 12862 2.024414 GTTCACTTTGGTGCCTGAACT 58.976 47.619 11.47 0.00 42.72 3.01
4737 12863 2.427095 GTTCACTTTGGTGCCTGAACTT 59.573 45.455 11.47 0.00 42.72 2.66
4738 12864 2.023673 TCACTTTGGTGCCTGAACTTG 58.976 47.619 0.00 0.00 42.72 3.16
4739 12865 2.023673 CACTTTGGTGCCTGAACTTGA 58.976 47.619 0.00 0.00 36.61 3.02
4740 12866 2.426738 CACTTTGGTGCCTGAACTTGAA 59.573 45.455 0.00 0.00 36.61 2.69
4741 12867 3.096092 ACTTTGGTGCCTGAACTTGAAA 58.904 40.909 0.00 0.00 0.00 2.69
4742 12868 3.513515 ACTTTGGTGCCTGAACTTGAAAA 59.486 39.130 0.00 0.00 0.00 2.29
4743 12869 4.020662 ACTTTGGTGCCTGAACTTGAAAAA 60.021 37.500 0.00 0.00 0.00 1.94
4744 12870 4.751767 TTGGTGCCTGAACTTGAAAAAT 57.248 36.364 0.00 0.00 0.00 1.82
4745 12871 5.860941 TTGGTGCCTGAACTTGAAAAATA 57.139 34.783 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.992063 AGTTGCTAAAAGACATAGGTGATG 57.008 37.500 0.00 0.00 41.79 3.07
1 2 7.852263 AGTAGTTGCTAAAAGACATAGGTGAT 58.148 34.615 0.00 0.00 0.00 3.06
2 3 7.241042 AGTAGTTGCTAAAAGACATAGGTGA 57.759 36.000 0.00 0.00 0.00 4.02
3 4 6.535508 GGAGTAGTTGCTAAAAGACATAGGTG 59.464 42.308 0.00 0.00 0.00 4.00
4 5 6.351966 GGGAGTAGTTGCTAAAAGACATAGGT 60.352 42.308 0.00 0.00 0.00 3.08
5 6 6.049790 GGGAGTAGTTGCTAAAAGACATAGG 58.950 44.000 0.00 0.00 0.00 2.57
6 7 6.879400 AGGGAGTAGTTGCTAAAAGACATAG 58.121 40.000 0.00 0.00 0.00 2.23
7 8 6.405508 CGAGGGAGTAGTTGCTAAAAGACATA 60.406 42.308 0.00 0.00 0.00 2.29
8 9 5.624738 CGAGGGAGTAGTTGCTAAAAGACAT 60.625 44.000 0.00 0.00 0.00 3.06
9 10 4.321750 CGAGGGAGTAGTTGCTAAAAGACA 60.322 45.833 0.00 0.00 0.00 3.41
10 11 4.174762 CGAGGGAGTAGTTGCTAAAAGAC 58.825 47.826 0.00 0.00 0.00 3.01
11 12 3.830755 ACGAGGGAGTAGTTGCTAAAAGA 59.169 43.478 0.00 0.00 0.00 2.52
12 13 4.189639 ACGAGGGAGTAGTTGCTAAAAG 57.810 45.455 0.00 0.00 0.00 2.27
13 14 4.612264 AACGAGGGAGTAGTTGCTAAAA 57.388 40.909 0.00 0.00 0.00 1.52
14 15 4.282703 AGAAACGAGGGAGTAGTTGCTAAA 59.717 41.667 0.00 0.00 32.34 1.85
15 16 3.830755 AGAAACGAGGGAGTAGTTGCTAA 59.169 43.478 0.00 0.00 32.34 3.09
16 17 3.428532 AGAAACGAGGGAGTAGTTGCTA 58.571 45.455 0.00 0.00 32.34 3.49
17 18 2.249139 AGAAACGAGGGAGTAGTTGCT 58.751 47.619 0.00 0.00 0.00 3.91
18 19 2.745515 AGAAACGAGGGAGTAGTTGC 57.254 50.000 0.00 0.00 0.00 4.17
19 20 8.767478 TTATTTTAGAAACGAGGGAGTAGTTG 57.233 34.615 0.00 0.00 0.00 3.16
20 21 8.591940 ACTTATTTTAGAAACGAGGGAGTAGTT 58.408 33.333 0.00 0.00 0.00 2.24
21 22 8.131847 ACTTATTTTAGAAACGAGGGAGTAGT 57.868 34.615 0.00 0.00 0.00 2.73
22 23 8.248945 TGACTTATTTTAGAAACGAGGGAGTAG 58.751 37.037 0.00 0.00 0.00 2.57
23 24 8.125978 TGACTTATTTTAGAAACGAGGGAGTA 57.874 34.615 0.00 0.00 0.00 2.59
24 25 7.001099 TGACTTATTTTAGAAACGAGGGAGT 57.999 36.000 0.00 0.00 0.00 3.85
25 26 8.494016 AATGACTTATTTTAGAAACGAGGGAG 57.506 34.615 0.00 0.00 0.00 4.30
26 27 8.857694 AAATGACTTATTTTAGAAACGAGGGA 57.142 30.769 0.00 0.00 35.47 4.20
99 100 9.860650 AATGAGTGAATCTATAGTCTACACTCT 57.139 33.333 28.39 20.23 46.88 3.24
106 107 8.356657 CGGAGAAAATGAGTGAATCTATAGTCT 58.643 37.037 0.00 0.00 0.00 3.24
107 108 8.138712 ACGGAGAAAATGAGTGAATCTATAGTC 58.861 37.037 0.00 0.00 0.00 2.59
108 109 8.012957 ACGGAGAAAATGAGTGAATCTATAGT 57.987 34.615 0.00 0.00 0.00 2.12
110 111 9.914131 CATACGGAGAAAATGAGTGAATCTATA 57.086 33.333 0.00 0.00 0.00 1.31
111 112 8.424918 ACATACGGAGAAAATGAGTGAATCTAT 58.575 33.333 0.00 0.00 0.00 1.98
112 113 7.782049 ACATACGGAGAAAATGAGTGAATCTA 58.218 34.615 0.00 0.00 0.00 1.98
113 114 6.644347 ACATACGGAGAAAATGAGTGAATCT 58.356 36.000 0.00 0.00 0.00 2.40
114 115 6.910536 ACATACGGAGAAAATGAGTGAATC 57.089 37.500 0.00 0.00 0.00 2.52
115 116 7.556844 AGTACATACGGAGAAAATGAGTGAAT 58.443 34.615 0.00 0.00 0.00 2.57
116 117 6.931838 AGTACATACGGAGAAAATGAGTGAA 58.068 36.000 0.00 0.00 0.00 3.18
117 118 6.405508 GGAGTACATACGGAGAAAATGAGTGA 60.406 42.308 0.00 0.00 0.00 3.41
118 119 5.749109 GGAGTACATACGGAGAAAATGAGTG 59.251 44.000 0.00 0.00 0.00 3.51
119 120 5.421056 TGGAGTACATACGGAGAAAATGAGT 59.579 40.000 0.00 0.00 0.00 3.41
120 121 5.902681 TGGAGTACATACGGAGAAAATGAG 58.097 41.667 0.00 0.00 0.00 2.90
121 122 5.925506 TGGAGTACATACGGAGAAAATGA 57.074 39.130 0.00 0.00 0.00 2.57
142 143 9.965902 ATAAGCCCTTTTAGATATTCCAGTATG 57.034 33.333 0.00 0.00 0.00 2.39
189 190 5.874261 GGCAAAATGGCAAGCTTTATTCTAA 59.126 36.000 0.00 0.00 43.14 2.10
190 191 5.418676 GGCAAAATGGCAAGCTTTATTCTA 58.581 37.500 0.00 0.00 43.14 2.10
279 281 1.180456 TGGAAGTCGACGGTAAGGCA 61.180 55.000 10.46 0.00 0.00 4.75
281 283 1.470979 CCATGGAAGTCGACGGTAAGG 60.471 57.143 5.56 5.79 0.00 2.69
288 290 6.284459 AGATATTTTCTCCATGGAAGTCGAC 58.716 40.000 17.00 7.70 0.00 4.20
290 292 6.763135 TGAAGATATTTTCTCCATGGAAGTCG 59.237 38.462 17.00 3.95 31.78 4.18
291 293 8.688747 ATGAAGATATTTTCTCCATGGAAGTC 57.311 34.615 17.00 6.27 26.55 3.01
292 294 7.723172 GGATGAAGATATTTTCTCCATGGAAGT 59.277 37.037 17.00 0.14 28.04 3.01
293 295 7.094890 CGGATGAAGATATTTTCTCCATGGAAG 60.095 40.741 17.00 10.18 28.04 3.46
294 296 6.712095 CGGATGAAGATATTTTCTCCATGGAA 59.288 38.462 17.00 0.17 28.04 3.53
295 297 6.043127 TCGGATGAAGATATTTTCTCCATGGA 59.957 38.462 15.27 15.27 28.04 3.41
296 298 6.233434 TCGGATGAAGATATTTTCTCCATGG 58.767 40.000 4.97 4.97 28.04 3.66
297 299 7.734924 TTCGGATGAAGATATTTTCTCCATG 57.265 36.000 17.10 0.00 28.04 3.66
299 301 9.440773 CATATTCGGATGAAGATATTTTCTCCA 57.559 33.333 17.10 6.32 33.89 3.86
300 302 8.887717 CCATATTCGGATGAAGATATTTTCTCC 58.112 37.037 7.44 9.77 33.89 3.71
301 303 8.394121 GCCATATTCGGATGAAGATATTTTCTC 58.606 37.037 7.44 3.21 33.89 2.87
302 304 8.105829 AGCCATATTCGGATGAAGATATTTTCT 58.894 33.333 7.44 0.00 33.89 2.52
303 305 8.273780 AGCCATATTCGGATGAAGATATTTTC 57.726 34.615 0.00 0.00 33.89 2.29
304 306 9.739276 TTAGCCATATTCGGATGAAGATATTTT 57.261 29.630 0.00 0.00 33.89 1.82
305 307 9.388506 CTTAGCCATATTCGGATGAAGATATTT 57.611 33.333 0.00 0.00 33.89 1.40
306 308 7.989741 CCTTAGCCATATTCGGATGAAGATATT 59.010 37.037 0.00 0.00 33.89 1.28
307 309 7.345653 TCCTTAGCCATATTCGGATGAAGATAT 59.654 37.037 0.00 0.00 33.89 1.63
308 310 6.667848 TCCTTAGCCATATTCGGATGAAGATA 59.332 38.462 0.00 0.00 33.89 1.98
309 311 5.485353 TCCTTAGCCATATTCGGATGAAGAT 59.515 40.000 0.00 0.00 36.49 2.40
310 312 4.838423 TCCTTAGCCATATTCGGATGAAGA 59.162 41.667 0.00 0.00 37.57 2.87
311 313 5.152623 TCCTTAGCCATATTCGGATGAAG 57.847 43.478 0.00 0.00 37.57 3.02
312 314 4.593206 ACTCCTTAGCCATATTCGGATGAA 59.407 41.667 0.00 0.00 38.76 2.57
313 315 4.160329 ACTCCTTAGCCATATTCGGATGA 58.840 43.478 0.00 0.00 0.00 2.92
314 316 4.543590 ACTCCTTAGCCATATTCGGATG 57.456 45.455 0.00 0.00 0.00 3.51
315 317 5.187967 CCTTACTCCTTAGCCATATTCGGAT 59.812 44.000 0.00 0.00 0.00 4.18
316 318 4.527038 CCTTACTCCTTAGCCATATTCGGA 59.473 45.833 0.00 0.00 0.00 4.55
317 319 4.527038 TCCTTACTCCTTAGCCATATTCGG 59.473 45.833 0.00 0.00 0.00 4.30
318 320 5.010719 TGTCCTTACTCCTTAGCCATATTCG 59.989 44.000 0.00 0.00 0.00 3.34
319 321 6.420913 TGTCCTTACTCCTTAGCCATATTC 57.579 41.667 0.00 0.00 0.00 1.75
320 322 6.558775 TGATGTCCTTACTCCTTAGCCATATT 59.441 38.462 0.00 0.00 0.00 1.28
321 323 6.084738 TGATGTCCTTACTCCTTAGCCATAT 58.915 40.000 0.00 0.00 0.00 1.78
322 324 5.464069 TGATGTCCTTACTCCTTAGCCATA 58.536 41.667 0.00 0.00 0.00 2.74
323 325 4.298626 TGATGTCCTTACTCCTTAGCCAT 58.701 43.478 0.00 0.00 0.00 4.40
324 326 3.719871 TGATGTCCTTACTCCTTAGCCA 58.280 45.455 0.00 0.00 0.00 4.75
325 327 4.755266 TTGATGTCCTTACTCCTTAGCC 57.245 45.455 0.00 0.00 0.00 3.93
326 328 5.104900 TCCTTTGATGTCCTTACTCCTTAGC 60.105 44.000 0.00 0.00 0.00 3.09
327 329 6.546428 TCCTTTGATGTCCTTACTCCTTAG 57.454 41.667 0.00 0.00 0.00 2.18
328 330 6.500751 AGTTCCTTTGATGTCCTTACTCCTTA 59.499 38.462 0.00 0.00 0.00 2.69
329 331 5.310857 AGTTCCTTTGATGTCCTTACTCCTT 59.689 40.000 0.00 0.00 0.00 3.36
330 332 4.846940 AGTTCCTTTGATGTCCTTACTCCT 59.153 41.667 0.00 0.00 0.00 3.69
331 333 4.938226 CAGTTCCTTTGATGTCCTTACTCC 59.062 45.833 0.00 0.00 0.00 3.85
332 334 5.552178 ACAGTTCCTTTGATGTCCTTACTC 58.448 41.667 0.00 0.00 0.00 2.59
333 335 5.568620 ACAGTTCCTTTGATGTCCTTACT 57.431 39.130 0.00 0.00 0.00 2.24
334 336 6.465084 AGTACAGTTCCTTTGATGTCCTTAC 58.535 40.000 0.00 0.00 0.00 2.34
335 337 6.681729 AGTACAGTTCCTTTGATGTCCTTA 57.318 37.500 0.00 0.00 0.00 2.69
336 338 5.568620 AGTACAGTTCCTTTGATGTCCTT 57.431 39.130 0.00 0.00 0.00 3.36
337 339 6.042781 TGTTAGTACAGTTCCTTTGATGTCCT 59.957 38.462 0.00 0.00 0.00 3.85
338 340 6.147328 GTGTTAGTACAGTTCCTTTGATGTCC 59.853 42.308 0.00 0.00 34.24 4.02
339 341 6.147328 GGTGTTAGTACAGTTCCTTTGATGTC 59.853 42.308 0.00 0.00 34.24 3.06
340 342 5.995897 GGTGTTAGTACAGTTCCTTTGATGT 59.004 40.000 0.00 0.00 34.24 3.06
341 343 6.231211 AGGTGTTAGTACAGTTCCTTTGATG 58.769 40.000 0.00 0.00 34.24 3.07
342 344 6.435292 AGGTGTTAGTACAGTTCCTTTGAT 57.565 37.500 0.00 0.00 34.24 2.57
343 345 5.221581 GGAGGTGTTAGTACAGTTCCTTTGA 60.222 44.000 0.00 0.00 36.08 2.69
344 346 4.995487 GGAGGTGTTAGTACAGTTCCTTTG 59.005 45.833 0.00 0.00 36.08 2.77
345 347 4.906060 AGGAGGTGTTAGTACAGTTCCTTT 59.094 41.667 0.00 0.00 41.82 3.11
346 348 4.283722 CAGGAGGTGTTAGTACAGTTCCTT 59.716 45.833 0.00 0.00 41.82 3.36
347 349 3.833070 CAGGAGGTGTTAGTACAGTTCCT 59.167 47.826 0.00 0.00 43.72 3.36
348 350 3.830755 TCAGGAGGTGTTAGTACAGTTCC 59.169 47.826 0.00 0.00 37.85 3.62
349 351 5.464030 TTCAGGAGGTGTTAGTACAGTTC 57.536 43.478 0.00 0.00 34.24 3.01
350 352 5.542635 TGATTCAGGAGGTGTTAGTACAGTT 59.457 40.000 0.00 0.00 34.24 3.16
351 353 5.084519 TGATTCAGGAGGTGTTAGTACAGT 58.915 41.667 0.00 0.00 34.24 3.55
352 354 5.186021 ACTGATTCAGGAGGTGTTAGTACAG 59.814 44.000 17.66 0.00 35.51 2.74
353 355 5.047306 CACTGATTCAGGAGGTGTTAGTACA 60.047 44.000 17.66 0.00 35.51 2.90
354 356 5.185249 TCACTGATTCAGGAGGTGTTAGTAC 59.815 44.000 17.66 0.00 35.51 2.73
355 357 5.330233 TCACTGATTCAGGAGGTGTTAGTA 58.670 41.667 17.66 0.00 35.51 1.82
356 358 4.160329 TCACTGATTCAGGAGGTGTTAGT 58.840 43.478 17.66 0.00 35.51 2.24
357 359 4.808414 TCACTGATTCAGGAGGTGTTAG 57.192 45.455 17.66 0.00 35.51 2.34
358 360 5.560722 TTTCACTGATTCAGGAGGTGTTA 57.439 39.130 17.66 0.00 35.51 2.41
359 361 4.437682 TTTCACTGATTCAGGAGGTGTT 57.562 40.909 17.66 0.00 35.51 3.32
360 362 4.437682 TTTTCACTGATTCAGGAGGTGT 57.562 40.909 17.66 0.00 35.51 4.16
361 363 5.972107 AATTTTCACTGATTCAGGAGGTG 57.028 39.130 17.66 7.86 35.51 4.00
362 364 7.405292 TCATAATTTTCACTGATTCAGGAGGT 58.595 34.615 17.66 0.00 35.51 3.85
363 365 7.772292 TCTCATAATTTTCACTGATTCAGGAGG 59.228 37.037 17.66 7.18 35.51 4.30
364 366 8.728337 TCTCATAATTTTCACTGATTCAGGAG 57.272 34.615 17.66 9.83 35.51 3.69
365 367 9.334947 GATCTCATAATTTTCACTGATTCAGGA 57.665 33.333 17.66 9.23 35.51 3.86
366 368 8.566260 GGATCTCATAATTTTCACTGATTCAGG 58.434 37.037 17.66 7.14 35.51 3.86
367 369 9.339850 AGGATCTCATAATTTTCACTGATTCAG 57.660 33.333 12.17 12.17 37.52 3.02
371 373 9.775854 CAGTAGGATCTCATAATTTTCACTGAT 57.224 33.333 0.00 0.00 32.28 2.90
372 374 8.206867 CCAGTAGGATCTCATAATTTTCACTGA 58.793 37.037 0.00 0.00 36.89 3.41
373 375 7.443575 CCCAGTAGGATCTCATAATTTTCACTG 59.556 40.741 0.00 0.00 38.24 3.66
374 376 7.420680 CCCCAGTAGGATCTCATAATTTTCACT 60.421 40.741 0.00 0.00 38.24 3.41
375 377 6.712547 CCCCAGTAGGATCTCATAATTTTCAC 59.287 42.308 0.00 0.00 38.24 3.18
376 378 6.389869 ACCCCAGTAGGATCTCATAATTTTCA 59.610 38.462 0.00 0.00 38.24 2.69
377 379 6.842676 ACCCCAGTAGGATCTCATAATTTTC 58.157 40.000 0.00 0.00 38.24 2.29
378 380 6.848562 ACCCCAGTAGGATCTCATAATTTT 57.151 37.500 0.00 0.00 38.24 1.82
379 381 7.947782 TTACCCCAGTAGGATCTCATAATTT 57.052 36.000 0.00 0.00 38.24 1.82
380 382 7.947782 TTTACCCCAGTAGGATCTCATAATT 57.052 36.000 0.00 0.00 38.24 1.40
381 383 7.947782 TTTTACCCCAGTAGGATCTCATAAT 57.052 36.000 0.00 0.00 38.24 1.28
382 384 7.758820 TTTTTACCCCAGTAGGATCTCATAA 57.241 36.000 0.00 0.00 38.24 1.90
383 385 7.794683 AGATTTTTACCCCAGTAGGATCTCATA 59.205 37.037 0.00 0.00 38.24 2.15
384 386 6.621514 AGATTTTTACCCCAGTAGGATCTCAT 59.378 38.462 0.00 0.00 38.24 2.90
385 387 5.970640 AGATTTTTACCCCAGTAGGATCTCA 59.029 40.000 0.00 0.00 38.24 3.27
386 388 6.327887 AGAGATTTTTACCCCAGTAGGATCTC 59.672 42.308 0.00 0.00 38.56 2.75
387 389 6.213525 AGAGATTTTTACCCCAGTAGGATCT 58.786 40.000 0.00 0.00 38.24 2.75
388 390 6.502074 AGAGATTTTTACCCCAGTAGGATC 57.498 41.667 0.00 0.00 38.24 3.36
389 391 6.043358 GCTAGAGATTTTTACCCCAGTAGGAT 59.957 42.308 0.00 0.00 38.24 3.24
390 392 5.365895 GCTAGAGATTTTTACCCCAGTAGGA 59.634 44.000 0.00 0.00 38.24 2.94
391 393 5.612351 GCTAGAGATTTTTACCCCAGTAGG 58.388 45.833 0.00 0.00 0.00 3.18
392 394 5.068723 TCGCTAGAGATTTTTACCCCAGTAG 59.931 44.000 0.00 0.00 0.00 2.57
393 395 4.957954 TCGCTAGAGATTTTTACCCCAGTA 59.042 41.667 0.00 0.00 0.00 2.74
394 396 3.773119 TCGCTAGAGATTTTTACCCCAGT 59.227 43.478 0.00 0.00 0.00 4.00
395 397 4.402056 TCGCTAGAGATTTTTACCCCAG 57.598 45.455 0.00 0.00 0.00 4.45
396 398 4.829872 TTCGCTAGAGATTTTTACCCCA 57.170 40.909 0.00 0.00 0.00 4.96
397 399 7.444487 ACATATTTCGCTAGAGATTTTTACCCC 59.556 37.037 0.00 0.00 0.00 4.95
398 400 8.379457 ACATATTTCGCTAGAGATTTTTACCC 57.621 34.615 0.00 0.00 0.00 3.69
399 401 9.042008 TGACATATTTCGCTAGAGATTTTTACC 57.958 33.333 0.00 0.00 0.00 2.85
402 404 9.383519 TCTTGACATATTTCGCTAGAGATTTTT 57.616 29.630 0.00 0.00 0.00 1.94
403 405 8.948631 TCTTGACATATTTCGCTAGAGATTTT 57.051 30.769 0.00 0.00 0.00 1.82
404 406 8.821894 GTTCTTGACATATTTCGCTAGAGATTT 58.178 33.333 0.00 0.00 0.00 2.17
405 407 7.439655 GGTTCTTGACATATTTCGCTAGAGATT 59.560 37.037 0.00 0.00 0.00 2.40
406 408 6.926272 GGTTCTTGACATATTTCGCTAGAGAT 59.074 38.462 0.00 0.00 0.00 2.75
407 409 6.273825 GGTTCTTGACATATTTCGCTAGAGA 58.726 40.000 0.00 0.00 0.00 3.10
408 410 5.463724 GGGTTCTTGACATATTTCGCTAGAG 59.536 44.000 0.00 0.00 0.00 2.43
409 411 5.128827 AGGGTTCTTGACATATTTCGCTAGA 59.871 40.000 0.00 0.00 0.00 2.43
410 412 5.360591 AGGGTTCTTGACATATTTCGCTAG 58.639 41.667 0.00 0.00 0.00 3.42
411 413 5.353394 AGGGTTCTTGACATATTTCGCTA 57.647 39.130 0.00 0.00 0.00 4.26
412 414 4.222124 AGGGTTCTTGACATATTTCGCT 57.778 40.909 0.00 0.00 0.00 4.93
413 415 7.724305 TTATAGGGTTCTTGACATATTTCGC 57.276 36.000 0.00 0.00 0.00 4.70
422 424 9.516314 GCATGTTATTTTTATAGGGTTCTTGAC 57.484 33.333 0.00 0.00 0.00 3.18
423 425 8.402472 CGCATGTTATTTTTATAGGGTTCTTGA 58.598 33.333 0.00 0.00 0.00 3.02
424 426 8.402472 TCGCATGTTATTTTTATAGGGTTCTTG 58.598 33.333 0.00 0.00 0.00 3.02
425 427 8.514330 TCGCATGTTATTTTTATAGGGTTCTT 57.486 30.769 0.00 0.00 0.00 2.52
426 428 8.403236 GTTCGCATGTTATTTTTATAGGGTTCT 58.597 33.333 0.00 0.00 0.00 3.01
427 429 8.185505 TGTTCGCATGTTATTTTTATAGGGTTC 58.814 33.333 0.00 0.00 0.00 3.62
428 430 7.971722 GTGTTCGCATGTTATTTTTATAGGGTT 59.028 33.333 0.00 0.00 0.00 4.11
429 431 7.121463 TGTGTTCGCATGTTATTTTTATAGGGT 59.879 33.333 0.00 0.00 0.00 4.34
430 432 7.476667 TGTGTTCGCATGTTATTTTTATAGGG 58.523 34.615 0.00 0.00 0.00 3.53
431 433 8.957028 CATGTGTTCGCATGTTATTTTTATAGG 58.043 33.333 15.49 0.00 40.81 2.57
432 434 8.471457 GCATGTGTTCGCATGTTATTTTTATAG 58.529 33.333 21.80 0.00 45.75 1.31
433 435 7.164990 CGCATGTGTTCGCATGTTATTTTTATA 59.835 33.333 21.80 0.00 45.75 0.98
434 436 6.020758 CGCATGTGTTCGCATGTTATTTTTAT 60.021 34.615 21.80 0.00 45.75 1.40
435 437 5.284897 CGCATGTGTTCGCATGTTATTTTTA 59.715 36.000 21.80 0.00 45.75 1.52
436 438 4.089780 CGCATGTGTTCGCATGTTATTTTT 59.910 37.500 21.80 0.00 45.75 1.94
437 439 3.607641 CGCATGTGTTCGCATGTTATTTT 59.392 39.130 21.80 0.00 45.75 1.82
438 440 3.170505 CGCATGTGTTCGCATGTTATTT 58.829 40.909 21.80 0.00 45.75 1.40
439 441 2.477694 CCGCATGTGTTCGCATGTTATT 60.478 45.455 21.80 0.00 45.75 1.40
440 442 1.063912 CCGCATGTGTTCGCATGTTAT 59.936 47.619 21.80 0.00 45.75 1.89
441 443 0.445829 CCGCATGTGTTCGCATGTTA 59.554 50.000 21.80 0.00 45.75 2.41
442 444 1.209898 CCGCATGTGTTCGCATGTT 59.790 52.632 21.80 0.00 45.75 2.71
443 445 1.233950 TTCCGCATGTGTTCGCATGT 61.234 50.000 21.80 0.00 45.75 3.21
445 447 0.109781 GTTTCCGCATGTGTTCGCAT 60.110 50.000 5.38 0.00 0.00 4.73
449 451 0.310543 TGCTGTTTCCGCATGTGTTC 59.689 50.000 5.38 0.00 31.40 3.18
452 454 1.155889 TACTGCTGTTTCCGCATGTG 58.844 50.000 0.09 0.00 36.70 3.21
455 457 3.857010 GCTTTTTACTGCTGTTTCCGCAT 60.857 43.478 0.09 0.00 36.70 4.73
463 465 1.593196 TCTGCGCTTTTTACTGCTGT 58.407 45.000 9.73 0.66 0.00 4.40
464 466 2.907910 ATCTGCGCTTTTTACTGCTG 57.092 45.000 9.73 0.00 0.00 4.41
467 469 5.053025 GCGAAATTATCTGCGCTTTTTACTG 60.053 40.000 9.73 0.00 45.41 2.74
478 480 2.286418 CGGTCTTGGCGAAATTATCTGC 60.286 50.000 0.00 0.00 0.00 4.26
481 483 4.609691 TTTCGGTCTTGGCGAAATTATC 57.390 40.909 0.00 0.00 0.00 1.75
483 485 4.832590 TTTTTCGGTCTTGGCGAAATTA 57.167 36.364 0.00 0.00 32.74 1.40
484 486 3.719173 TTTTTCGGTCTTGGCGAAATT 57.281 38.095 0.00 0.00 32.74 1.82
528 530 6.240894 AGCACTCATTTCTTGGATGTCTTTA 58.759 36.000 0.00 0.00 0.00 1.85
547 549 4.401022 TGAAAAACATCATGAGGAGCACT 58.599 39.130 15.42 0.00 0.00 4.40
567 569 7.199766 ACAGCATTGTTAGAACGAAAAATTGA 58.800 30.769 0.00 0.00 32.28 2.57
568 570 7.393551 ACAGCATTGTTAGAACGAAAAATTG 57.606 32.000 0.00 0.00 32.28 2.32
572 574 7.030165 TGAAAACAGCATTGTTAGAACGAAAA 58.970 30.769 0.00 0.00 46.54 2.29
577 579 8.130307 ACATTTGAAAACAGCATTGTTAGAAC 57.870 30.769 0.00 0.00 46.54 3.01
578 580 8.715191 AACATTTGAAAACAGCATTGTTAGAA 57.285 26.923 0.00 0.00 46.54 2.10
579 581 8.715191 AAACATTTGAAAACAGCATTGTTAGA 57.285 26.923 0.00 0.00 46.54 2.10
583 585 8.891671 AGATAAACATTTGAAAACAGCATTGT 57.108 26.923 0.00 0.00 39.87 2.71
614 616 9.716507 CGGTCAAATAAATTAATCAATTCTCGT 57.283 29.630 0.00 0.00 33.09 4.18
621 623 9.456147 TCTTCTCCGGTCAAATAAATTAATCAA 57.544 29.630 0.00 0.00 0.00 2.57
624 626 9.462606 AAGTCTTCTCCGGTCAAATAAATTAAT 57.537 29.630 0.00 0.00 0.00 1.40
628 630 5.648092 CCAAGTCTTCTCCGGTCAAATAAAT 59.352 40.000 0.00 0.00 0.00 1.40
665 667 1.600013 CACATGTGAAAACGGACGGAA 59.400 47.619 21.64 0.00 0.00 4.30
708 735 4.202315 TGACAGTGCCAGTATTGTACACTT 60.202 41.667 0.00 0.00 37.58 3.16
723 755 4.154737 TGCATATTCAAAGTCTGACAGTGC 59.845 41.667 10.88 8.25 36.19 4.40
726 758 5.064452 GTCCTGCATATTCAAAGTCTGACAG 59.936 44.000 10.88 0.00 32.21 3.51
835 867 3.582647 TCTTCTTGGCTACTGTGATCCAA 59.417 43.478 8.98 8.98 37.11 3.53
856 898 0.321122 CTCAGCAGGTGTGGTTCCTC 60.321 60.000 0.00 0.00 32.37 3.71
860 902 0.839946 AAGTCTCAGCAGGTGTGGTT 59.160 50.000 0.00 0.00 29.64 3.67
862 904 0.394192 TCAAGTCTCAGCAGGTGTGG 59.606 55.000 0.00 0.00 0.00 4.17
937 996 3.570638 CGGCTGCGGAGATGCTTG 61.571 66.667 8.65 0.00 35.36 4.01
967 1026 2.761304 GAAGCTTGCTGGGAGTGGCT 62.761 60.000 2.10 0.00 0.00 4.75
991 1050 2.836154 GGGATCCATTGCCGGCTA 59.164 61.111 29.70 22.36 0.00 3.93
1121 1180 0.315706 GTCGTCGAGATCCGTTACCG 60.316 60.000 0.00 0.00 39.75 4.02
1122 1181 0.315706 CGTCGTCGAGATCCGTTACC 60.316 60.000 0.00 0.00 39.71 2.85
1123 1182 0.371645 ACGTCGTCGAGATCCGTTAC 59.628 55.000 9.47 1.61 40.62 2.50
1124 1183 0.647410 GACGTCGTCGAGATCCGTTA 59.353 55.000 10.05 0.00 40.62 3.18
1125 1184 1.423056 GACGTCGTCGAGATCCGTT 59.577 57.895 10.05 0.00 40.62 4.44
1126 1185 2.459442 GGACGTCGTCGAGATCCGT 61.459 63.158 18.61 8.17 40.62 4.69
1127 1186 2.323790 GGACGTCGTCGAGATCCG 59.676 66.667 18.61 5.38 40.62 4.18
1128 1187 1.352404 CTGGACGTCGTCGAGATCC 59.648 63.158 27.43 15.05 40.06 3.36
1129 1188 1.297745 GCTGGACGTCGTCGAGATC 60.298 63.158 33.17 17.37 40.06 2.75
1130 1189 2.762234 GGCTGGACGTCGTCGAGAT 61.762 63.158 33.17 0.00 40.06 2.75
1131 1190 3.429141 GGCTGGACGTCGTCGAGA 61.429 66.667 33.17 14.13 40.06 4.04
1132 1191 3.432588 AGGCTGGACGTCGTCGAG 61.433 66.667 27.20 27.20 40.49 4.04
1155 1214 2.441348 TACTCCCATCGCTGCGGA 60.441 61.111 23.03 10.28 0.00 5.54
1513 1572 1.462238 AGACCTTGTCCTGGCAGGT 60.462 57.895 31.60 13.66 36.53 4.00
1514 1573 1.298014 GAGACCTTGTCCTGGCAGG 59.702 63.158 28.01 28.01 36.46 4.85
1515 1574 1.298014 GGAGACCTTGTCCTGGCAG 59.702 63.158 7.75 7.75 32.18 4.85
1516 1575 1.461268 TGGAGACCTTGTCCTGGCA 60.461 57.895 0.00 0.00 34.86 4.92
1517 1576 1.003233 GTGGAGACCTTGTCCTGGC 60.003 63.158 0.00 0.00 34.86 4.85
1518 1577 1.127567 TGGTGGAGACCTTGTCCTGG 61.128 60.000 0.00 0.00 43.58 4.45
1579 1638 0.834612 TCCACCAACTTGAGAACGGT 59.165 50.000 0.00 0.00 0.00 4.83
2049 2444 0.965866 CCAGGGAGAGCACGTAGACA 60.966 60.000 0.00 0.00 0.00 3.41
2123 2527 7.746475 CAGGACTGAAACAACGAGAAAATAATC 59.254 37.037 0.00 0.00 0.00 1.75
2134 2538 4.811555 TTTCATCAGGACTGAAACAACG 57.188 40.909 6.06 0.00 43.58 4.10
2158 2574 6.577103 TGACATTATTCTCATCAGTGTCCTC 58.423 40.000 0.00 0.00 35.00 3.71
2217 2652 6.098982 TGAAGAGAAAGGAGAAACAGAGTTCT 59.901 38.462 0.00 0.00 40.62 3.01
2465 3000 0.251341 AAGGCCCTGTACCTTGCAAG 60.251 55.000 19.93 19.93 45.88 4.01
2686 3221 7.901029 AGAAGACAATATGGATCACGACATAT 58.099 34.615 0.00 0.00 40.88 1.78
2748 3289 3.883830 TCTCCAGCAACAGATCTTCTC 57.116 47.619 0.00 0.00 0.00 2.87
3083 3634 3.276846 GTGTTGCGTGCTTCCGGT 61.277 61.111 0.00 0.00 0.00 5.28
3239 4045 3.891366 TGCTTCTTCCTTTCTCCCTTTTG 59.109 43.478 0.00 0.00 0.00 2.44
3782 4671 1.675483 CGCCCCGAATTTTGATCATGA 59.325 47.619 0.00 0.00 0.00 3.07
3788 4677 1.827681 TCAATCGCCCCGAATTTTGA 58.172 45.000 0.00 0.00 39.99 2.69
3897 4853 9.475620 TCTGATTACATCAACTAGACTAGGAAA 57.524 33.333 14.03 0.00 39.11 3.13
3986 4969 1.066143 CAGGAAAGCGTCACCTACCAT 60.066 52.381 0.00 0.00 32.35 3.55
4035 11866 1.197721 CTCATGCACTTCCCGTTCAAC 59.802 52.381 0.00 0.00 0.00 3.18
4137 12126 6.861065 ATTAGGAATTGCACAATACGGTAG 57.139 37.500 0.00 0.00 0.00 3.18
4138 12127 8.911918 ATTATTAGGAATTGCACAATACGGTA 57.088 30.769 0.00 0.00 0.00 4.02
4139 12128 7.817418 ATTATTAGGAATTGCACAATACGGT 57.183 32.000 0.00 0.00 0.00 4.83
4140 12129 9.825972 CTAATTATTAGGAATTGCACAATACGG 57.174 33.333 4.16 0.00 31.51 4.02
4141 12130 9.329913 GCTAATTATTAGGAATTGCACAATACG 57.670 33.333 13.14 0.00 33.80 3.06
4307 12407 2.106938 CGCCAGCTCCGATGCTAA 59.893 61.111 2.02 0.00 41.98 3.09
4315 12415 2.182537 CAAAATGGCGCCAGCTCC 59.817 61.111 35.36 3.24 44.37 4.70
4362 12463 1.435105 CAGCTGCTTCCGATCGAGA 59.565 57.895 18.66 9.51 0.00 4.04
4541 12666 3.188786 CGCTCCTTTTCTCCGGCG 61.189 66.667 0.00 0.00 36.89 6.46
4602 12728 2.355837 GCGTCCAGCTTGTCGACA 60.356 61.111 15.76 15.76 44.04 4.35
4610 12736 2.995574 AACTACCCGCGTCCAGCT 60.996 61.111 4.92 0.00 45.59 4.24
4611 12737 2.502692 AAGAACTACCCGCGTCCAGC 62.503 60.000 4.92 0.00 43.95 4.85
4612 12738 0.458025 GAAGAACTACCCGCGTCCAG 60.458 60.000 4.92 0.42 0.00 3.86
4613 12739 0.896940 AGAAGAACTACCCGCGTCCA 60.897 55.000 4.92 0.00 0.00 4.02
4614 12740 0.245813 AAGAAGAACTACCCGCGTCC 59.754 55.000 4.92 0.00 0.00 4.79
4615 12741 2.075979 AAAGAAGAACTACCCGCGTC 57.924 50.000 4.92 0.00 0.00 5.19
4616 12742 2.538512 AAAAGAAGAACTACCCGCGT 57.461 45.000 4.92 0.00 0.00 6.01
4617 12743 3.582780 AGTAAAAGAAGAACTACCCGCG 58.417 45.455 0.00 0.00 0.00 6.46
4618 12744 7.606858 AATTAGTAAAAGAAGAACTACCCGC 57.393 36.000 0.00 0.00 0.00 6.13
4629 12755 9.947433 TCCGGTTGAGATTAATTAGTAAAAGAA 57.053 29.630 0.00 0.00 0.00 2.52
4630 12756 9.595823 CTCCGGTTGAGATTAATTAGTAAAAGA 57.404 33.333 0.00 0.00 44.42 2.52
4631 12757 8.336080 GCTCCGGTTGAGATTAATTAGTAAAAG 58.664 37.037 0.00 0.00 44.42 2.27
4632 12758 7.825270 TGCTCCGGTTGAGATTAATTAGTAAAA 59.175 33.333 0.00 0.00 44.42 1.52
4633 12759 7.332557 TGCTCCGGTTGAGATTAATTAGTAAA 58.667 34.615 0.00 0.00 44.42 2.01
4634 12760 6.880484 TGCTCCGGTTGAGATTAATTAGTAA 58.120 36.000 0.00 0.00 44.42 2.24
4635 12761 6.474140 TGCTCCGGTTGAGATTAATTAGTA 57.526 37.500 0.00 0.00 44.42 1.82
4636 12762 5.353394 TGCTCCGGTTGAGATTAATTAGT 57.647 39.130 0.00 0.00 44.42 2.24
4637 12763 5.584649 TGTTGCTCCGGTTGAGATTAATTAG 59.415 40.000 0.00 0.00 44.42 1.73
4638 12764 5.492895 TGTTGCTCCGGTTGAGATTAATTA 58.507 37.500 0.00 0.00 44.42 1.40
4639 12765 4.331968 TGTTGCTCCGGTTGAGATTAATT 58.668 39.130 0.00 0.00 44.42 1.40
4640 12766 3.950397 TGTTGCTCCGGTTGAGATTAAT 58.050 40.909 0.00 0.00 44.42 1.40
4641 12767 3.410631 TGTTGCTCCGGTTGAGATTAA 57.589 42.857 0.00 0.00 44.42 1.40
4642 12768 3.410631 TTGTTGCTCCGGTTGAGATTA 57.589 42.857 0.00 0.00 44.42 1.75
4643 12769 2.270352 TTGTTGCTCCGGTTGAGATT 57.730 45.000 0.00 0.00 44.42 2.40
4644 12770 1.880027 GTTTGTTGCTCCGGTTGAGAT 59.120 47.619 0.00 0.00 44.42 2.75
4645 12771 1.305201 GTTTGTTGCTCCGGTTGAGA 58.695 50.000 0.00 0.00 44.42 3.27
4646 12772 0.310854 GGTTTGTTGCTCCGGTTGAG 59.689 55.000 0.00 0.00 44.47 3.02
4647 12773 0.106918 AGGTTTGTTGCTCCGGTTGA 60.107 50.000 0.00 0.00 0.00 3.18
4648 12774 0.744281 AAGGTTTGTTGCTCCGGTTG 59.256 50.000 0.00 0.00 0.00 3.77
4649 12775 1.480789 AAAGGTTTGTTGCTCCGGTT 58.519 45.000 0.00 0.00 0.00 4.44
4650 12776 1.480789 AAAAGGTTTGTTGCTCCGGT 58.519 45.000 0.00 0.00 0.00 5.28
4651 12777 2.595124 AAAAAGGTTTGTTGCTCCGG 57.405 45.000 0.00 0.00 0.00 5.14
4652 12778 4.381566 CGAATAAAAAGGTTTGTTGCTCCG 59.618 41.667 0.00 0.00 29.16 4.63
4653 12779 5.174943 CACGAATAAAAAGGTTTGTTGCTCC 59.825 40.000 0.00 0.00 29.16 4.70
4654 12780 5.974751 TCACGAATAAAAAGGTTTGTTGCTC 59.025 36.000 0.00 0.00 29.16 4.26
4655 12781 5.897050 TCACGAATAAAAAGGTTTGTTGCT 58.103 33.333 0.00 0.00 29.16 3.91
4656 12782 5.174943 CCTCACGAATAAAAAGGTTTGTTGC 59.825 40.000 0.00 0.00 29.16 4.17
4657 12783 6.270064 ACCTCACGAATAAAAAGGTTTGTTG 58.730 36.000 0.00 0.00 37.01 3.33
4658 12784 6.459670 ACCTCACGAATAAAAAGGTTTGTT 57.540 33.333 0.00 0.00 37.01 2.83
4659 12785 7.571080 TTACCTCACGAATAAAAAGGTTTGT 57.429 32.000 0.00 0.00 40.69 2.83
4662 12788 9.287373 TGTTATTACCTCACGAATAAAAAGGTT 57.713 29.630 0.00 0.00 40.69 3.50
4663 12789 8.724229 GTGTTATTACCTCACGAATAAAAAGGT 58.276 33.333 0.00 0.00 42.78 3.50
4664 12790 8.943002 AGTGTTATTACCTCACGAATAAAAAGG 58.057 33.333 0.00 0.00 37.20 3.11
4668 12794 9.577110 CACTAGTGTTATTACCTCACGAATAAA 57.423 33.333 15.06 0.00 37.20 1.40
4669 12795 8.192774 CCACTAGTGTTATTACCTCACGAATAA 58.807 37.037 21.18 0.00 37.20 1.40
4670 12796 7.340232 ACCACTAGTGTTATTACCTCACGAATA 59.660 37.037 21.18 0.00 37.20 1.75
4671 12797 6.154021 ACCACTAGTGTTATTACCTCACGAAT 59.846 38.462 21.18 0.00 37.20 3.34
4672 12798 5.477984 ACCACTAGTGTTATTACCTCACGAA 59.522 40.000 21.18 0.00 37.20 3.85
4673 12799 5.012239 ACCACTAGTGTTATTACCTCACGA 58.988 41.667 21.18 0.00 37.20 4.35
4674 12800 5.100259 CACCACTAGTGTTATTACCTCACG 58.900 45.833 21.18 4.00 41.93 4.35
4688 12814 2.552373 GGCAAGTTTAGGCACCACTAGT 60.552 50.000 0.00 0.00 0.00 2.57
4689 12815 2.084546 GGCAAGTTTAGGCACCACTAG 58.915 52.381 0.00 0.00 0.00 2.57
4690 12816 1.422024 TGGCAAGTTTAGGCACCACTA 59.578 47.619 0.00 0.00 36.56 2.74
4691 12817 0.184933 TGGCAAGTTTAGGCACCACT 59.815 50.000 0.00 0.00 36.56 4.00
4692 12818 1.202348 GATGGCAAGTTTAGGCACCAC 59.798 52.381 0.00 0.00 44.68 4.16
4693 12819 1.544724 GATGGCAAGTTTAGGCACCA 58.455 50.000 0.00 0.00 44.68 4.17
4694 12820 0.451783 CGATGGCAAGTTTAGGCACC 59.548 55.000 0.00 0.00 44.68 5.01
4695 12821 1.448985 TCGATGGCAAGTTTAGGCAC 58.551 50.000 0.00 0.00 44.68 5.01
4696 12822 2.016318 CATCGATGGCAAGTTTAGGCA 58.984 47.619 17.96 0.00 45.98 4.75
4697 12823 2.017049 ACATCGATGGCAAGTTTAGGC 58.983 47.619 28.09 0.00 0.00 3.93
4698 12824 3.689161 TGAACATCGATGGCAAGTTTAGG 59.311 43.478 28.09 0.00 0.00 2.69
4699 12825 4.393062 AGTGAACATCGATGGCAAGTTTAG 59.607 41.667 28.09 0.38 0.00 1.85
4700 12826 4.323417 AGTGAACATCGATGGCAAGTTTA 58.677 39.130 28.09 8.06 0.00 2.01
4701 12827 3.149196 AGTGAACATCGATGGCAAGTTT 58.851 40.909 28.09 12.86 0.00 2.66
4702 12828 2.783135 AGTGAACATCGATGGCAAGTT 58.217 42.857 28.09 13.58 0.00 2.66
4703 12829 2.479566 AGTGAACATCGATGGCAAGT 57.520 45.000 28.09 13.05 0.00 3.16
4704 12830 3.495193 CAAAGTGAACATCGATGGCAAG 58.505 45.455 28.09 12.58 0.00 4.01
4705 12831 2.228582 CCAAAGTGAACATCGATGGCAA 59.771 45.455 28.09 10.83 0.00 4.52
4706 12832 1.811965 CCAAAGTGAACATCGATGGCA 59.188 47.619 28.09 21.70 0.00 4.92
4707 12833 1.812571 ACCAAAGTGAACATCGATGGC 59.187 47.619 28.09 19.52 0.00 4.40
4720 12846 2.435372 TCAAGTTCAGGCACCAAAGT 57.565 45.000 0.00 0.00 0.00 2.66
4721 12847 3.799281 TTTCAAGTTCAGGCACCAAAG 57.201 42.857 0.00 0.00 0.00 2.77
4722 12848 4.543590 TTTTTCAAGTTCAGGCACCAAA 57.456 36.364 0.00 0.00 0.00 3.28
4723 12849 4.751767 ATTTTTCAAGTTCAGGCACCAA 57.248 36.364 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.