Multiple sequence alignment - TraesCS6D01G341200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G341200 chr6D 100.000 5423 0 0 1 5423 440362619 440368041 0.000000e+00 10015
1 TraesCS6D01G341200 chr6A 93.607 4098 177 33 707 4761 588455208 588459263 0.000000e+00 6037
2 TraesCS6D01G341200 chr6A 85.437 515 33 16 4944 5423 588459521 588460028 1.050000e-136 497
3 TraesCS6D01G341200 chr6A 88.235 170 9 6 4778 4943 588459318 588459480 5.540000e-45 193
4 TraesCS6D01G341200 chr6B 93.851 2049 78 21 2386 4428 665509338 665511344 0.000000e+00 3042
5 TraesCS6D01G341200 chr6B 93.210 1031 35 11 755 1755 665507750 665508775 0.000000e+00 1483
6 TraesCS6D01G341200 chr6B 92.922 551 21 8 1822 2355 665508787 665509336 0.000000e+00 785
7 TraesCS6D01G341200 chr6B 95.102 490 19 3 4458 4943 665511347 665511835 0.000000e+00 767
8 TraesCS6D01G341200 chr6B 88.296 487 34 10 1 469 665500786 665501267 3.670000e-156 562
9 TraesCS6D01G341200 chr6B 83.826 507 29 15 4948 5423 665511880 665512364 3.000000e-117 433
10 TraesCS6D01G341200 chr1B 92.814 167 5 5 536 697 364248337 364248501 9.080000e-58 235
11 TraesCS6D01G341200 chr3D 91.379 174 8 7 536 703 533955682 533955510 1.170000e-56 231
12 TraesCS6D01G341200 chr2D 92.073 164 9 2 537 697 423348355 423348517 1.520000e-55 228
13 TraesCS6D01G341200 chr1A 91.463 164 11 3 536 697 337678992 337678830 7.070000e-54 222
14 TraesCS6D01G341200 chr1A 90.816 98 7 2 284 380 448633732 448633636 4.410000e-26 130
15 TraesCS6D01G341200 chr1A 88.776 98 9 2 284 380 448634133 448634037 9.540000e-23 119
16 TraesCS6D01G341200 chr7D 90.286 175 8 6 537 704 44802102 44802274 2.540000e-53 220
17 TraesCS6D01G341200 chr7D 89.831 177 9 6 536 704 93937624 93937449 9.150000e-53 219
18 TraesCS6D01G341200 chr3B 89.714 175 12 4 536 705 766376897 766377070 9.150000e-53 219
19 TraesCS6D01G341200 chr1D 90.058 171 14 3 536 704 222282731 222282900 9.150000e-53 219
20 TraesCS6D01G341200 chrUn 90.361 166 14 2 536 700 369332965 369332801 3.290000e-52 217
21 TraesCS6D01G341200 chr5D 82.759 116 15 5 269 383 352015398 352015287 1.240000e-16 99


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G341200 chr6D 440362619 440368041 5422 False 10015.000000 10015 100.0000 1 5423 1 chr6D.!!$F1 5422
1 TraesCS6D01G341200 chr6A 588455208 588460028 4820 False 2242.333333 6037 89.0930 707 5423 3 chr6A.!!$F1 4716
2 TraesCS6D01G341200 chr6B 665507750 665512364 4614 False 1302.000000 3042 91.7822 755 5423 5 chr6B.!!$F2 4668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
847 867 0.033601 GGAGCTGTCCCTCTCTCTGA 60.034 60.0 0.0 0.0 36.76 3.27 F
2032 2088 0.109735 CCCGCTTTCGCCTTTTTCTC 60.110 55.0 0.0 0.0 0.00 2.87 F
3777 3864 0.038892 GTGGATGCCAGCACAACAAG 60.039 55.0 0.0 0.0 32.34 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2691 2770 0.036577 CCCTGTCTGTCTGGCTCTTG 60.037 60.000 0.00 0.0 34.39 3.02 R
4027 4115 2.490509 CAGTGGCAATTGAGCAGATGAA 59.509 45.455 10.34 0.0 35.83 2.57 R
4696 4788 0.318762 ACAAGAGGAACGACAGCTCC 59.681 55.000 0.00 0.0 32.85 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.820775 AGTAGAGGATATCAAAGGGCTCA 58.179 43.478 4.83 0.00 0.00 4.26
24 25 5.410602 AGTAGAGGATATCAAAGGGCTCAT 58.589 41.667 4.83 0.00 0.00 2.90
25 26 4.637387 AGAGGATATCAAAGGGCTCATG 57.363 45.455 4.83 0.00 0.00 3.07
26 27 3.080319 GAGGATATCAAAGGGCTCATGC 58.920 50.000 4.83 0.00 38.76 4.06
27 28 2.715336 AGGATATCAAAGGGCTCATGCT 59.285 45.455 4.83 0.00 39.59 3.79
28 29 2.818432 GGATATCAAAGGGCTCATGCTG 59.182 50.000 4.83 0.00 39.59 4.41
29 30 3.497405 GGATATCAAAGGGCTCATGCTGA 60.497 47.826 4.83 0.00 39.59 4.26
30 31 2.519771 ATCAAAGGGCTCATGCTGAA 57.480 45.000 0.00 0.00 39.59 3.02
31 32 2.519771 TCAAAGGGCTCATGCTGAAT 57.480 45.000 0.00 0.00 39.59 2.57
32 33 2.811410 TCAAAGGGCTCATGCTGAATT 58.189 42.857 0.00 0.00 39.59 2.17
33 34 2.494471 TCAAAGGGCTCATGCTGAATTG 59.506 45.455 0.00 0.00 39.59 2.32
34 35 1.481871 AAGGGCTCATGCTGAATTGG 58.518 50.000 0.00 0.00 39.59 3.16
35 36 1.041447 AGGGCTCATGCTGAATTGGC 61.041 55.000 0.00 0.00 39.59 4.52
36 37 1.324740 GGGCTCATGCTGAATTGGCA 61.325 55.000 5.35 5.35 44.05 4.92
37 38 0.533491 GGCTCATGCTGAATTGGCAA 59.467 50.000 0.68 0.68 43.14 4.52
38 39 1.470979 GGCTCATGCTGAATTGGCAAG 60.471 52.381 5.96 3.52 43.14 4.01
39 40 1.470979 GCTCATGCTGAATTGGCAAGG 60.471 52.381 5.96 0.00 43.14 3.61
40 41 2.097036 CTCATGCTGAATTGGCAAGGA 58.903 47.619 5.96 0.00 43.14 3.36
41 42 2.693591 CTCATGCTGAATTGGCAAGGAT 59.306 45.455 5.96 0.00 43.14 3.24
42 43 2.429250 TCATGCTGAATTGGCAAGGATG 59.571 45.455 10.98 10.98 43.14 3.51
62 63 3.143010 AAGGTCACTTGGAGACGGA 57.857 52.632 0.00 0.00 36.87 4.69
63 64 0.969894 AAGGTCACTTGGAGACGGAG 59.030 55.000 0.00 0.00 36.87 4.63
64 65 0.900647 AGGTCACTTGGAGACGGAGG 60.901 60.000 0.00 0.00 36.87 4.30
65 66 1.186267 GGTCACTTGGAGACGGAGGT 61.186 60.000 0.00 0.00 36.87 3.85
66 67 0.244178 GTCACTTGGAGACGGAGGTC 59.756 60.000 0.00 0.00 43.76 3.85
78 79 1.869690 GGAGGTCTGCGAACAAAGC 59.130 57.895 0.00 0.00 0.00 3.51
79 80 0.603975 GGAGGTCTGCGAACAAAGCT 60.604 55.000 0.00 0.00 35.28 3.74
80 81 0.514691 GAGGTCTGCGAACAAAGCTG 59.485 55.000 0.00 0.00 35.28 4.24
81 82 1.081840 GGTCTGCGAACAAAGCTGC 60.082 57.895 0.00 0.00 34.25 5.25
82 83 1.510480 GGTCTGCGAACAAAGCTGCT 61.510 55.000 0.00 0.00 34.25 4.24
83 84 0.110464 GTCTGCGAACAAAGCTGCTC 60.110 55.000 1.00 0.00 34.25 4.26
84 85 0.532640 TCTGCGAACAAAGCTGCTCA 60.533 50.000 1.00 0.00 34.25 4.26
85 86 0.385223 CTGCGAACAAAGCTGCTCAC 60.385 55.000 1.00 0.00 35.28 3.51
86 87 1.094650 TGCGAACAAAGCTGCTCACA 61.095 50.000 1.00 0.00 35.28 3.58
87 88 0.658536 GCGAACAAAGCTGCTCACAC 60.659 55.000 1.00 0.00 0.00 3.82
88 89 0.940126 CGAACAAAGCTGCTCACACT 59.060 50.000 1.00 0.00 0.00 3.55
89 90 1.070309 CGAACAAAGCTGCTCACACTC 60.070 52.381 1.00 0.00 0.00 3.51
90 91 2.216898 GAACAAAGCTGCTCACACTCT 58.783 47.619 1.00 0.00 0.00 3.24
91 92 2.338577 ACAAAGCTGCTCACACTCTT 57.661 45.000 1.00 0.00 0.00 2.85
92 93 1.945394 ACAAAGCTGCTCACACTCTTG 59.055 47.619 1.00 4.47 0.00 3.02
93 94 0.950116 AAAGCTGCTCACACTCTTGC 59.050 50.000 1.00 0.00 0.00 4.01
94 95 0.888285 AAGCTGCTCACACTCTTGCC 60.888 55.000 1.00 0.00 0.00 4.52
95 96 1.598962 GCTGCTCACACTCTTGCCA 60.599 57.895 0.00 0.00 0.00 4.92
96 97 1.168407 GCTGCTCACACTCTTGCCAA 61.168 55.000 0.00 0.00 0.00 4.52
97 98 0.873054 CTGCTCACACTCTTGCCAAG 59.127 55.000 0.00 0.00 0.00 3.61
98 99 1.168407 TGCTCACACTCTTGCCAAGC 61.168 55.000 0.00 0.00 0.00 4.01
99 100 0.888285 GCTCACACTCTTGCCAAGCT 60.888 55.000 0.00 0.00 0.00 3.74
100 101 1.609061 GCTCACACTCTTGCCAAGCTA 60.609 52.381 0.00 0.00 0.00 3.32
101 102 2.344950 CTCACACTCTTGCCAAGCTAG 58.655 52.381 0.00 0.00 33.07 3.42
102 103 0.801251 CACACTCTTGCCAAGCTAGC 59.199 55.000 6.62 6.62 31.96 3.42
103 104 0.689623 ACACTCTTGCCAAGCTAGCT 59.310 50.000 12.68 12.68 31.96 3.32
104 105 1.085091 CACTCTTGCCAAGCTAGCTG 58.915 55.000 20.16 12.30 31.96 4.24
105 106 0.689623 ACTCTTGCCAAGCTAGCTGT 59.310 50.000 20.16 6.10 31.96 4.40
106 107 1.902508 ACTCTTGCCAAGCTAGCTGTA 59.097 47.619 20.16 2.99 31.96 2.74
107 108 2.093764 ACTCTTGCCAAGCTAGCTGTAG 60.094 50.000 20.16 11.20 31.96 2.74
108 109 1.208052 TCTTGCCAAGCTAGCTGTAGG 59.792 52.381 20.16 20.67 31.96 3.18
109 110 1.208052 CTTGCCAAGCTAGCTGTAGGA 59.792 52.381 26.60 14.86 0.00 2.94
110 111 0.826715 TGCCAAGCTAGCTGTAGGAG 59.173 55.000 26.60 11.71 0.00 3.69
111 112 1.115467 GCCAAGCTAGCTGTAGGAGA 58.885 55.000 26.60 0.00 0.00 3.71
112 113 1.691434 GCCAAGCTAGCTGTAGGAGAT 59.309 52.381 26.60 5.51 0.00 2.75
113 114 2.547642 GCCAAGCTAGCTGTAGGAGATG 60.548 54.545 26.60 15.85 0.00 2.90
114 115 2.961741 CCAAGCTAGCTGTAGGAGATGA 59.038 50.000 20.16 0.00 0.00 2.92
115 116 3.386078 CCAAGCTAGCTGTAGGAGATGAA 59.614 47.826 20.16 0.00 0.00 2.57
116 117 4.501229 CCAAGCTAGCTGTAGGAGATGAAG 60.501 50.000 20.16 0.00 0.00 3.02
117 118 3.909732 AGCTAGCTGTAGGAGATGAAGT 58.090 45.455 18.57 0.00 0.00 3.01
118 119 3.636300 AGCTAGCTGTAGGAGATGAAGTG 59.364 47.826 18.57 0.00 0.00 3.16
119 120 3.383185 GCTAGCTGTAGGAGATGAAGTGT 59.617 47.826 7.70 0.00 0.00 3.55
120 121 3.883830 AGCTGTAGGAGATGAAGTGTG 57.116 47.619 0.00 0.00 0.00 3.82
121 122 2.093764 AGCTGTAGGAGATGAAGTGTGC 60.094 50.000 0.00 0.00 0.00 4.57
122 123 2.093764 GCTGTAGGAGATGAAGTGTGCT 60.094 50.000 0.00 0.00 0.00 4.40
123 124 3.618507 GCTGTAGGAGATGAAGTGTGCTT 60.619 47.826 0.00 0.00 37.71 3.91
124 125 3.930336 TGTAGGAGATGAAGTGTGCTTG 58.070 45.455 0.00 0.00 34.61 4.01
125 126 2.486472 AGGAGATGAAGTGTGCTTGG 57.514 50.000 0.00 0.00 34.61 3.61
126 127 1.980765 AGGAGATGAAGTGTGCTTGGA 59.019 47.619 0.00 0.00 34.61 3.53
127 128 2.373169 AGGAGATGAAGTGTGCTTGGAA 59.627 45.455 0.00 0.00 34.61 3.53
128 129 3.009916 AGGAGATGAAGTGTGCTTGGAAT 59.990 43.478 0.00 0.00 34.61 3.01
129 130 3.128242 GGAGATGAAGTGTGCTTGGAATG 59.872 47.826 0.00 0.00 34.61 2.67
130 131 3.087031 AGATGAAGTGTGCTTGGAATGG 58.913 45.455 0.00 0.00 34.61 3.16
131 132 0.961019 TGAAGTGTGCTTGGAATGGC 59.039 50.000 0.00 0.00 34.61 4.40
132 133 0.109597 GAAGTGTGCTTGGAATGGCG 60.110 55.000 0.00 0.00 34.61 5.69
133 134 1.526575 AAGTGTGCTTGGAATGGCGG 61.527 55.000 0.00 0.00 32.92 6.13
134 135 3.372730 TGTGCTTGGAATGGCGGC 61.373 61.111 0.00 0.00 0.00 6.53
135 136 3.372730 GTGCTTGGAATGGCGGCA 61.373 61.111 16.34 16.34 0.00 5.69
136 137 2.362760 TGCTTGGAATGGCGGCAT 60.363 55.556 20.18 20.18 0.00 4.40
137 138 2.105528 GCTTGGAATGGCGGCATG 59.894 61.111 26.50 13.42 0.00 4.06
138 139 2.713967 GCTTGGAATGGCGGCATGT 61.714 57.895 26.50 15.19 0.00 3.21
139 140 1.140161 CTTGGAATGGCGGCATGTG 59.860 57.895 26.50 9.99 0.00 3.21
140 141 2.894240 CTTGGAATGGCGGCATGTGC 62.894 60.000 26.50 19.35 41.14 4.57
150 151 2.103538 GCATGTGCCGCCTGATTG 59.896 61.111 0.00 0.00 34.31 2.67
151 152 2.703798 GCATGTGCCGCCTGATTGT 61.704 57.895 0.00 0.00 34.31 2.71
152 153 1.375853 GCATGTGCCGCCTGATTGTA 61.376 55.000 0.00 0.00 34.31 2.41
153 154 1.311859 CATGTGCCGCCTGATTGTAT 58.688 50.000 0.00 0.00 0.00 2.29
154 155 1.265095 CATGTGCCGCCTGATTGTATC 59.735 52.381 0.00 0.00 0.00 2.24
155 156 0.541392 TGTGCCGCCTGATTGTATCT 59.459 50.000 0.00 0.00 0.00 1.98
156 157 1.065491 TGTGCCGCCTGATTGTATCTT 60.065 47.619 0.00 0.00 0.00 2.40
157 158 2.169561 TGTGCCGCCTGATTGTATCTTA 59.830 45.455 0.00 0.00 0.00 2.10
158 159 3.202906 GTGCCGCCTGATTGTATCTTAA 58.797 45.455 0.00 0.00 0.00 1.85
159 160 3.248602 GTGCCGCCTGATTGTATCTTAAG 59.751 47.826 0.00 0.00 0.00 1.85
160 161 3.118408 TGCCGCCTGATTGTATCTTAAGT 60.118 43.478 1.63 0.00 0.00 2.24
161 162 3.248602 GCCGCCTGATTGTATCTTAAGTG 59.751 47.826 1.63 0.00 0.00 3.16
162 163 4.442706 CCGCCTGATTGTATCTTAAGTGT 58.557 43.478 1.63 0.00 0.00 3.55
163 164 5.597806 CCGCCTGATTGTATCTTAAGTGTA 58.402 41.667 1.63 0.00 0.00 2.90
164 165 6.046593 CCGCCTGATTGTATCTTAAGTGTAA 58.953 40.000 1.63 0.00 0.00 2.41
165 166 6.706270 CCGCCTGATTGTATCTTAAGTGTAAT 59.294 38.462 1.63 0.28 0.00 1.89
166 167 7.870954 CCGCCTGATTGTATCTTAAGTGTAATA 59.129 37.037 1.63 0.00 0.00 0.98
167 168 8.916654 CGCCTGATTGTATCTTAAGTGTAATAG 58.083 37.037 1.63 0.00 0.00 1.73
168 169 8.713271 GCCTGATTGTATCTTAAGTGTAATAGC 58.287 37.037 1.63 1.81 0.00 2.97
169 170 8.916654 CCTGATTGTATCTTAAGTGTAATAGCG 58.083 37.037 1.63 0.00 0.00 4.26
170 171 8.812147 TGATTGTATCTTAAGTGTAATAGCGG 57.188 34.615 1.63 0.00 0.00 5.52
171 172 8.635328 TGATTGTATCTTAAGTGTAATAGCGGA 58.365 33.333 1.63 0.00 0.00 5.54
172 173 9.640963 GATTGTATCTTAAGTGTAATAGCGGAT 57.359 33.333 1.63 0.00 0.00 4.18
173 174 8.812147 TTGTATCTTAAGTGTAATAGCGGATG 57.188 34.615 1.63 0.00 0.00 3.51
174 175 8.173542 TGTATCTTAAGTGTAATAGCGGATGA 57.826 34.615 1.63 0.00 0.00 2.92
175 176 8.297426 TGTATCTTAAGTGTAATAGCGGATGAG 58.703 37.037 1.63 0.00 0.00 2.90
176 177 6.954487 TCTTAAGTGTAATAGCGGATGAGA 57.046 37.500 1.63 0.00 0.00 3.27
177 178 7.526142 TCTTAAGTGTAATAGCGGATGAGAT 57.474 36.000 1.63 0.00 0.00 2.75
178 179 7.594714 TCTTAAGTGTAATAGCGGATGAGATC 58.405 38.462 1.63 0.00 0.00 2.75
179 180 4.792521 AGTGTAATAGCGGATGAGATCC 57.207 45.455 0.00 0.00 46.22 3.36
188 189 2.739885 GGATGAGATCCGAGACCATG 57.260 55.000 0.00 0.00 40.13 3.66
189 190 1.337635 GGATGAGATCCGAGACCATGC 60.338 57.143 0.00 0.00 40.13 4.06
190 191 1.617850 GATGAGATCCGAGACCATGCT 59.382 52.381 0.00 0.00 0.00 3.79
191 192 1.489481 TGAGATCCGAGACCATGCTT 58.511 50.000 0.00 0.00 0.00 3.91
192 193 2.666317 TGAGATCCGAGACCATGCTTA 58.334 47.619 0.00 0.00 0.00 3.09
193 194 3.031013 TGAGATCCGAGACCATGCTTAA 58.969 45.455 0.00 0.00 0.00 1.85
194 195 3.450817 TGAGATCCGAGACCATGCTTAAA 59.549 43.478 0.00 0.00 0.00 1.52
195 196 4.101585 TGAGATCCGAGACCATGCTTAAAT 59.898 41.667 0.00 0.00 0.00 1.40
196 197 5.304357 TGAGATCCGAGACCATGCTTAAATA 59.696 40.000 0.00 0.00 0.00 1.40
197 198 6.174720 AGATCCGAGACCATGCTTAAATAA 57.825 37.500 0.00 0.00 0.00 1.40
198 199 6.591935 AGATCCGAGACCATGCTTAAATAAA 58.408 36.000 0.00 0.00 0.00 1.40
199 200 7.227156 AGATCCGAGACCATGCTTAAATAAAT 58.773 34.615 0.00 0.00 0.00 1.40
200 201 7.721399 AGATCCGAGACCATGCTTAAATAAATT 59.279 33.333 0.00 0.00 0.00 1.82
201 202 8.918202 ATCCGAGACCATGCTTAAATAAATTA 57.082 30.769 0.00 0.00 0.00 1.40
202 203 8.378172 TCCGAGACCATGCTTAAATAAATTAG 57.622 34.615 0.00 0.00 0.00 1.73
203 204 7.444183 TCCGAGACCATGCTTAAATAAATTAGG 59.556 37.037 0.00 0.00 0.00 2.69
204 205 7.228706 CCGAGACCATGCTTAAATAAATTAGGT 59.771 37.037 0.00 0.00 0.00 3.08
205 206 8.621286 CGAGACCATGCTTAAATAAATTAGGTT 58.379 33.333 0.00 0.00 0.00 3.50
206 207 9.736023 GAGACCATGCTTAAATAAATTAGGTTG 57.264 33.333 0.00 0.00 0.00 3.77
207 208 9.255029 AGACCATGCTTAAATAAATTAGGTTGT 57.745 29.630 0.00 0.00 0.00 3.32
208 209 9.869757 GACCATGCTTAAATAAATTAGGTTGTT 57.130 29.630 0.00 0.00 0.00 2.83
212 213 9.884636 ATGCTTAAATAAATTAGGTTGTTTCCC 57.115 29.630 0.00 0.00 0.00 3.97
213 214 9.095700 TGCTTAAATAAATTAGGTTGTTTCCCT 57.904 29.630 0.00 0.00 36.04 4.20
240 241 7.921786 AAAAACATATCCTGAGTTCGATTCA 57.078 32.000 0.00 0.00 0.00 2.57
241 242 6.910536 AAACATATCCTGAGTTCGATTCAC 57.089 37.500 0.00 0.00 0.00 3.18
242 243 4.950050 ACATATCCTGAGTTCGATTCACC 58.050 43.478 0.00 0.00 0.00 4.02
243 244 4.405680 ACATATCCTGAGTTCGATTCACCA 59.594 41.667 0.00 0.00 0.00 4.17
244 245 5.070981 ACATATCCTGAGTTCGATTCACCAT 59.929 40.000 0.00 0.00 0.00 3.55
245 246 3.526931 TCCTGAGTTCGATTCACCATC 57.473 47.619 0.00 0.00 0.00 3.51
246 247 2.831526 TCCTGAGTTCGATTCACCATCA 59.168 45.455 0.00 0.00 0.00 3.07
247 248 2.932614 CCTGAGTTCGATTCACCATCAC 59.067 50.000 0.00 0.00 0.00 3.06
248 249 2.932614 CTGAGTTCGATTCACCATCACC 59.067 50.000 0.00 0.00 0.00 4.02
249 250 2.301583 TGAGTTCGATTCACCATCACCA 59.698 45.455 0.00 0.00 0.00 4.17
250 251 3.055167 TGAGTTCGATTCACCATCACCAT 60.055 43.478 0.00 0.00 0.00 3.55
251 252 3.273434 AGTTCGATTCACCATCACCATG 58.727 45.455 0.00 0.00 0.00 3.66
252 253 3.009723 GTTCGATTCACCATCACCATGT 58.990 45.455 0.00 0.00 0.00 3.21
253 254 4.081142 AGTTCGATTCACCATCACCATGTA 60.081 41.667 0.00 0.00 0.00 2.29
254 255 3.792401 TCGATTCACCATCACCATGTAC 58.208 45.455 0.00 0.00 0.00 2.90
255 256 3.196685 TCGATTCACCATCACCATGTACA 59.803 43.478 0.00 0.00 0.00 2.90
256 257 3.557185 CGATTCACCATCACCATGTACAG 59.443 47.826 0.33 0.00 0.00 2.74
257 258 4.517285 GATTCACCATCACCATGTACAGT 58.483 43.478 0.33 0.00 0.00 3.55
258 259 3.610040 TCACCATCACCATGTACAGTC 57.390 47.619 0.33 0.00 0.00 3.51
259 260 2.236146 TCACCATCACCATGTACAGTCC 59.764 50.000 0.33 0.00 0.00 3.85
260 261 2.237143 CACCATCACCATGTACAGTCCT 59.763 50.000 0.33 0.00 0.00 3.85
261 262 2.912956 ACCATCACCATGTACAGTCCTT 59.087 45.455 0.33 0.00 0.00 3.36
262 263 3.330701 ACCATCACCATGTACAGTCCTTT 59.669 43.478 0.33 0.00 0.00 3.11
263 264 4.534500 ACCATCACCATGTACAGTCCTTTA 59.466 41.667 0.33 0.00 0.00 1.85
264 265 5.013704 ACCATCACCATGTACAGTCCTTTAA 59.986 40.000 0.33 0.00 0.00 1.52
265 266 5.943416 CCATCACCATGTACAGTCCTTTAAA 59.057 40.000 0.33 0.00 0.00 1.52
266 267 6.128007 CCATCACCATGTACAGTCCTTTAAAC 60.128 42.308 0.33 0.00 0.00 2.01
267 268 5.310451 TCACCATGTACAGTCCTTTAAACC 58.690 41.667 0.33 0.00 0.00 3.27
268 269 5.072600 TCACCATGTACAGTCCTTTAAACCT 59.927 40.000 0.33 0.00 0.00 3.50
269 270 5.768164 CACCATGTACAGTCCTTTAAACCTT 59.232 40.000 0.33 0.00 0.00 3.50
270 271 6.264518 CACCATGTACAGTCCTTTAAACCTTT 59.735 38.462 0.33 0.00 0.00 3.11
271 272 6.489022 ACCATGTACAGTCCTTTAAACCTTTC 59.511 38.462 0.33 0.00 0.00 2.62
272 273 6.488683 CCATGTACAGTCCTTTAAACCTTTCA 59.511 38.462 0.33 0.00 0.00 2.69
273 274 6.930667 TGTACAGTCCTTTAAACCTTTCAC 57.069 37.500 0.00 0.00 0.00 3.18
274 275 6.655930 TGTACAGTCCTTTAAACCTTTCACT 58.344 36.000 0.00 0.00 0.00 3.41
275 276 6.540914 TGTACAGTCCTTTAAACCTTTCACTG 59.459 38.462 0.00 0.00 36.81 3.66
276 277 5.751586 ACAGTCCTTTAAACCTTTCACTGA 58.248 37.500 0.00 0.00 35.15 3.41
277 278 5.823045 ACAGTCCTTTAAACCTTTCACTGAG 59.177 40.000 0.00 0.00 35.15 3.35
278 279 6.055588 CAGTCCTTTAAACCTTTCACTGAGA 58.944 40.000 0.00 0.00 33.30 3.27
279 280 6.542370 CAGTCCTTTAAACCTTTCACTGAGAA 59.458 38.462 0.00 0.00 33.30 2.87
280 281 7.067008 CAGTCCTTTAAACCTTTCACTGAGAAA 59.933 37.037 0.53 0.53 43.71 2.52
304 305 3.893326 AAAACAGATAAATGGGCCAGC 57.107 42.857 13.78 0.00 0.00 4.85
305 306 1.780503 AACAGATAAATGGGCCAGCC 58.219 50.000 13.78 0.00 0.00 4.85
315 316 2.746277 GGCCAGCCCAGTTACACG 60.746 66.667 0.00 0.00 0.00 4.49
316 317 2.746277 GCCAGCCCAGTTACACGG 60.746 66.667 0.00 0.00 0.00 4.94
317 318 2.746277 CCAGCCCAGTTACACGGC 60.746 66.667 4.79 4.79 43.35 5.68
320 321 3.431725 GCCCAGTTACACGGCTGC 61.432 66.667 5.61 0.00 39.70 5.25
321 322 3.118454 CCCAGTTACACGGCTGCG 61.118 66.667 0.00 0.00 0.00 5.18
322 323 3.118454 CCAGTTACACGGCTGCGG 61.118 66.667 5.60 5.60 0.00 5.69
323 324 3.118454 CAGTTACACGGCTGCGGG 61.118 66.667 11.99 2.27 0.00 6.13
337 338 2.743149 CGGGCGCCGGTTAGAAAA 60.743 61.111 24.78 0.00 44.15 2.29
338 339 2.326589 CGGGCGCCGGTTAGAAAAA 61.327 57.895 24.78 0.00 44.15 1.94
339 340 1.650314 CGGGCGCCGGTTAGAAAAAT 61.650 55.000 24.78 0.00 44.15 1.82
340 341 0.528924 GGGCGCCGGTTAGAAAAATT 59.471 50.000 22.54 0.00 0.00 1.82
341 342 1.624487 GGCGCCGGTTAGAAAAATTG 58.376 50.000 12.58 0.00 0.00 2.32
342 343 0.989164 GCGCCGGTTAGAAAAATTGC 59.011 50.000 1.90 0.00 0.00 3.56
343 344 1.624487 CGCCGGTTAGAAAAATTGCC 58.376 50.000 1.90 0.00 0.00 4.52
344 345 1.734377 CGCCGGTTAGAAAAATTGCCC 60.734 52.381 1.90 0.00 0.00 5.36
345 346 1.548719 GCCGGTTAGAAAAATTGCCCT 59.451 47.619 1.90 0.00 0.00 5.19
346 347 2.028476 GCCGGTTAGAAAAATTGCCCTT 60.028 45.455 1.90 0.00 0.00 3.95
347 348 3.193903 GCCGGTTAGAAAAATTGCCCTTA 59.806 43.478 1.90 0.00 0.00 2.69
348 349 4.322123 GCCGGTTAGAAAAATTGCCCTTAA 60.322 41.667 1.90 0.00 0.00 1.85
349 350 5.165676 CCGGTTAGAAAAATTGCCCTTAAC 58.834 41.667 0.00 0.00 0.00 2.01
350 351 5.165676 CGGTTAGAAAAATTGCCCTTAACC 58.834 41.667 0.00 0.00 0.00 2.85
351 352 5.165676 GGTTAGAAAAATTGCCCTTAACCG 58.834 41.667 0.00 0.00 0.00 4.44
352 353 3.953712 AGAAAAATTGCCCTTAACCGG 57.046 42.857 0.00 0.00 0.00 5.28
360 361 4.708386 CCTTAACCGGCGCCCACA 62.708 66.667 23.46 0.00 0.00 4.17
361 362 2.670251 CTTAACCGGCGCCCACAA 60.670 61.111 23.46 9.04 0.00 3.33
362 363 2.973316 CTTAACCGGCGCCCACAAC 61.973 63.158 23.46 0.00 0.00 3.32
370 371 2.816083 CGCCCACAACGCCGAATA 60.816 61.111 0.00 0.00 0.00 1.75
371 372 2.808958 CGCCCACAACGCCGAATAG 61.809 63.158 0.00 0.00 0.00 1.73
372 373 2.469516 GCCCACAACGCCGAATAGG 61.470 63.158 0.00 0.00 44.97 2.57
373 374 1.817941 CCCACAACGCCGAATAGGG 60.818 63.158 0.00 0.00 41.48 3.53
374 375 1.078708 CCACAACGCCGAATAGGGT 60.079 57.895 0.00 0.00 41.48 4.34
375 376 0.675522 CCACAACGCCGAATAGGGTT 60.676 55.000 0.00 0.00 41.48 4.11
376 377 1.161843 CACAACGCCGAATAGGGTTT 58.838 50.000 0.00 0.00 41.48 3.27
377 378 1.135803 CACAACGCCGAATAGGGTTTG 60.136 52.381 0.00 0.00 41.48 2.93
378 379 0.179174 CAACGCCGAATAGGGTTTGC 60.179 55.000 0.00 0.00 41.48 3.68
379 380 1.310216 AACGCCGAATAGGGTTTGCC 61.310 55.000 0.00 0.00 41.48 4.52
380 381 1.747367 CGCCGAATAGGGTTTGCCA 60.747 57.895 0.00 0.00 41.48 4.92
381 382 1.309499 CGCCGAATAGGGTTTGCCAA 61.309 55.000 0.00 0.00 41.48 4.52
382 383 0.892063 GCCGAATAGGGTTTGCCAAA 59.108 50.000 0.00 0.00 41.48 3.28
383 384 1.480545 GCCGAATAGGGTTTGCCAAAT 59.519 47.619 0.00 0.00 41.48 2.32
384 385 2.691011 GCCGAATAGGGTTTGCCAAATA 59.309 45.455 0.00 0.00 41.48 1.40
385 386 3.320826 GCCGAATAGGGTTTGCCAAATAT 59.679 43.478 0.00 0.00 41.48 1.28
386 387 4.795962 GCCGAATAGGGTTTGCCAAATATG 60.796 45.833 0.00 0.00 41.48 1.78
387 388 4.340950 CCGAATAGGGTTTGCCAAATATGT 59.659 41.667 0.00 0.00 36.17 2.29
388 389 5.507315 CCGAATAGGGTTTGCCAAATATGTC 60.507 44.000 0.00 0.00 36.17 3.06
389 390 5.514274 AATAGGGTTTGCCAAATATGTCG 57.486 39.130 0.00 0.00 36.17 4.35
390 391 1.476488 AGGGTTTGCCAAATATGTCGC 59.524 47.619 0.00 0.00 36.17 5.19
391 392 1.470805 GGGTTTGCCAAATATGTCGCC 60.471 52.381 0.00 0.00 36.17 5.54
392 393 1.476488 GGTTTGCCAAATATGTCGCCT 59.524 47.619 0.00 0.00 34.09 5.52
393 394 2.685897 GGTTTGCCAAATATGTCGCCTA 59.314 45.455 0.00 0.00 34.09 3.93
394 395 3.488553 GGTTTGCCAAATATGTCGCCTAC 60.489 47.826 0.00 0.00 34.09 3.18
395 396 2.700722 TGCCAAATATGTCGCCTACA 57.299 45.000 0.00 0.00 43.86 2.74
396 397 7.173971 GGTTTGCCAAATATGTCGCCTACAT 62.174 44.000 0.00 4.86 42.32 2.29
397 398 8.559576 GGTTTGCCAAATATGTCGCCTACATT 62.560 42.308 4.79 0.00 41.02 2.71
403 404 3.116073 TGTCGCCTACATTGACACG 57.884 52.632 0.00 0.00 37.69 4.49
404 405 0.315886 TGTCGCCTACATTGACACGT 59.684 50.000 0.00 0.00 37.69 4.49
405 406 0.713883 GTCGCCTACATTGACACGTG 59.286 55.000 15.48 15.48 32.91 4.49
406 407 0.389296 TCGCCTACATTGACACGTGG 60.389 55.000 21.57 3.64 0.00 4.94
407 408 1.794222 GCCTACATTGACACGTGGC 59.206 57.895 21.57 19.24 0.00 5.01
408 409 1.644786 GCCTACATTGACACGTGGCC 61.645 60.000 21.02 11.16 33.45 5.36
409 410 0.036388 CCTACATTGACACGTGGCCT 60.036 55.000 21.02 2.76 0.00 5.19
410 411 1.610624 CCTACATTGACACGTGGCCTT 60.611 52.381 21.02 2.54 0.00 4.35
411 412 2.151202 CTACATTGACACGTGGCCTTT 58.849 47.619 21.02 2.78 0.00 3.11
412 413 0.951558 ACATTGACACGTGGCCTTTC 59.048 50.000 21.02 7.60 0.00 2.62
413 414 0.950836 CATTGACACGTGGCCTTTCA 59.049 50.000 21.02 10.49 0.00 2.69
414 415 0.951558 ATTGACACGTGGCCTTTCAC 59.048 50.000 21.02 0.00 0.00 3.18
415 416 0.393132 TTGACACGTGGCCTTTCACA 60.393 50.000 21.02 0.00 37.50 3.58
416 417 0.813610 TGACACGTGGCCTTTCACAG 60.814 55.000 21.02 0.00 37.50 3.66
417 418 2.117941 GACACGTGGCCTTTCACAGC 62.118 60.000 21.57 0.00 37.50 4.40
418 419 2.972505 ACGTGGCCTTTCACAGCG 60.973 61.111 3.32 0.00 37.50 5.18
419 420 3.726517 CGTGGCCTTTCACAGCGG 61.727 66.667 3.32 0.00 37.50 5.52
420 421 4.043200 GTGGCCTTTCACAGCGGC 62.043 66.667 3.32 0.00 43.03 6.53
423 424 3.793144 GCCTTTCACAGCGGCGAG 61.793 66.667 12.98 4.29 33.64 5.03
434 435 1.736645 GCGGCGAGCAGTAAACTGA 60.737 57.895 12.98 0.00 46.59 3.41
435 436 1.687494 GCGGCGAGCAGTAAACTGAG 61.687 60.000 12.98 5.49 46.59 3.35
436 437 1.687494 CGGCGAGCAGTAAACTGAGC 61.687 60.000 14.21 13.82 46.59 4.26
437 438 1.362406 GGCGAGCAGTAAACTGAGCC 61.362 60.000 20.64 20.64 46.59 4.70
438 439 1.687494 GCGAGCAGTAAACTGAGCCG 61.687 60.000 14.21 12.84 46.59 5.52
439 440 1.078759 CGAGCAGTAAACTGAGCCGG 61.079 60.000 14.21 0.00 46.59 6.13
440 441 1.362406 GAGCAGTAAACTGAGCCGGC 61.362 60.000 21.89 21.89 46.59 6.13
441 442 2.399356 GCAGTAAACTGAGCCGGCC 61.399 63.158 26.15 15.80 46.59 6.13
442 443 1.745489 CAGTAAACTGAGCCGGCCC 60.745 63.158 26.15 13.59 46.59 5.80
443 444 2.221299 AGTAAACTGAGCCGGCCCA 61.221 57.895 26.15 18.76 0.00 5.36
444 445 1.745489 GTAAACTGAGCCGGCCCAG 60.745 63.158 33.73 33.73 36.53 4.45
445 446 3.622060 TAAACTGAGCCGGCCCAGC 62.622 63.158 35.03 17.56 33.90 4.85
450 451 4.096003 GAGCCGGCCCAGCAGTTA 62.096 66.667 26.15 0.00 0.00 2.24
451 452 3.622060 GAGCCGGCCCAGCAGTTAA 62.622 63.158 26.15 0.00 0.00 2.01
452 453 2.440247 GCCGGCCCAGCAGTTAAT 60.440 61.111 18.11 0.00 0.00 1.40
453 454 1.153046 GCCGGCCCAGCAGTTAATA 60.153 57.895 18.11 0.00 0.00 0.98
454 455 1.166531 GCCGGCCCAGCAGTTAATAG 61.167 60.000 18.11 0.00 0.00 1.73
455 456 0.180406 CCGGCCCAGCAGTTAATAGT 59.820 55.000 0.00 0.00 0.00 2.12
456 457 1.583054 CGGCCCAGCAGTTAATAGTC 58.417 55.000 0.00 0.00 0.00 2.59
457 458 1.139058 CGGCCCAGCAGTTAATAGTCT 59.861 52.381 0.00 0.00 0.00 3.24
458 459 2.803492 CGGCCCAGCAGTTAATAGTCTC 60.803 54.545 0.00 0.00 0.00 3.36
459 460 2.436173 GGCCCAGCAGTTAATAGTCTCT 59.564 50.000 0.00 0.00 0.00 3.10
460 461 3.462021 GCCCAGCAGTTAATAGTCTCTG 58.538 50.000 0.00 0.00 0.00 3.35
461 462 3.118592 GCCCAGCAGTTAATAGTCTCTGT 60.119 47.826 0.00 0.00 0.00 3.41
462 463 4.099573 GCCCAGCAGTTAATAGTCTCTGTA 59.900 45.833 0.00 0.00 0.00 2.74
463 464 5.737635 GCCCAGCAGTTAATAGTCTCTGTAG 60.738 48.000 0.00 0.00 0.00 2.74
464 465 5.361285 CCCAGCAGTTAATAGTCTCTGTAGT 59.639 44.000 0.00 0.00 0.00 2.73
465 466 6.269315 CCAGCAGTTAATAGTCTCTGTAGTG 58.731 44.000 0.00 0.00 0.00 2.74
466 467 6.269315 CAGCAGTTAATAGTCTCTGTAGTGG 58.731 44.000 0.00 0.00 0.00 4.00
467 468 5.952947 AGCAGTTAATAGTCTCTGTAGTGGT 59.047 40.000 0.00 0.00 0.00 4.16
468 469 6.095720 AGCAGTTAATAGTCTCTGTAGTGGTC 59.904 42.308 0.00 0.00 0.00 4.02
469 470 6.487960 CAGTTAATAGTCTCTGTAGTGGTCG 58.512 44.000 0.00 0.00 0.00 4.79
470 471 5.066246 AGTTAATAGTCTCTGTAGTGGTCGC 59.934 44.000 0.00 0.00 0.00 5.19
471 472 2.783609 TAGTCTCTGTAGTGGTCGCT 57.216 50.000 0.00 0.00 0.00 4.93
472 473 2.783609 AGTCTCTGTAGTGGTCGCTA 57.216 50.000 0.00 0.00 0.00 4.26
473 474 3.284793 AGTCTCTGTAGTGGTCGCTAT 57.715 47.619 0.00 0.00 0.00 2.97
474 475 2.946329 AGTCTCTGTAGTGGTCGCTATG 59.054 50.000 0.00 0.00 0.00 2.23
475 476 2.943690 GTCTCTGTAGTGGTCGCTATGA 59.056 50.000 0.00 0.00 0.00 2.15
476 477 3.377485 GTCTCTGTAGTGGTCGCTATGAA 59.623 47.826 0.00 0.00 0.00 2.57
477 478 3.628032 TCTCTGTAGTGGTCGCTATGAAG 59.372 47.826 0.00 0.00 0.00 3.02
478 479 2.099263 TCTGTAGTGGTCGCTATGAAGC 59.901 50.000 0.00 0.00 45.86 3.86
479 480 1.136305 TGTAGTGGTCGCTATGAAGCC 59.864 52.381 0.00 0.00 46.68 4.35
480 481 0.750850 TAGTGGTCGCTATGAAGCCC 59.249 55.000 0.00 0.00 46.68 5.19
481 482 1.220749 GTGGTCGCTATGAAGCCCA 59.779 57.895 0.00 0.00 46.68 5.36
482 483 0.811616 GTGGTCGCTATGAAGCCCAG 60.812 60.000 0.00 0.00 46.68 4.45
483 484 0.975556 TGGTCGCTATGAAGCCCAGA 60.976 55.000 0.00 0.00 46.68 3.86
484 485 0.178068 GGTCGCTATGAAGCCCAGAA 59.822 55.000 0.00 0.00 46.68 3.02
485 486 1.576356 GTCGCTATGAAGCCCAGAAG 58.424 55.000 0.00 0.00 46.68 2.85
486 487 1.134670 GTCGCTATGAAGCCCAGAAGT 60.135 52.381 0.00 0.00 46.68 3.01
487 488 1.555075 TCGCTATGAAGCCCAGAAGTT 59.445 47.619 0.00 0.00 46.68 2.66
488 489 2.027192 TCGCTATGAAGCCCAGAAGTTT 60.027 45.455 0.00 0.00 46.68 2.66
489 490 2.749621 CGCTATGAAGCCCAGAAGTTTT 59.250 45.455 0.00 0.00 46.68 2.43
490 491 3.426695 CGCTATGAAGCCCAGAAGTTTTG 60.427 47.826 0.00 0.00 46.68 2.44
491 492 3.507622 GCTATGAAGCCCAGAAGTTTTGT 59.492 43.478 0.00 0.00 43.40 2.83
492 493 4.700213 GCTATGAAGCCCAGAAGTTTTGTA 59.300 41.667 0.00 0.00 43.40 2.41
493 494 5.392057 GCTATGAAGCCCAGAAGTTTTGTAC 60.392 44.000 0.00 0.00 43.40 2.90
494 495 4.164843 TGAAGCCCAGAAGTTTTGTACT 57.835 40.909 0.00 0.00 39.32 2.73
495 496 3.882888 TGAAGCCCAGAAGTTTTGTACTG 59.117 43.478 0.00 0.00 37.12 2.74
496 497 2.863809 AGCCCAGAAGTTTTGTACTGG 58.136 47.619 0.00 0.00 46.37 4.00
497 498 2.174854 AGCCCAGAAGTTTTGTACTGGT 59.825 45.455 0.00 0.00 45.65 4.00
498 499 2.552743 GCCCAGAAGTTTTGTACTGGTC 59.447 50.000 0.00 0.00 45.65 4.02
499 500 3.815809 CCCAGAAGTTTTGTACTGGTCA 58.184 45.455 0.00 0.00 45.65 4.02
500 501 4.398319 CCCAGAAGTTTTGTACTGGTCAT 58.602 43.478 0.00 0.00 45.65 3.06
501 502 5.556915 CCCAGAAGTTTTGTACTGGTCATA 58.443 41.667 0.00 0.00 45.65 2.15
502 503 6.001460 CCCAGAAGTTTTGTACTGGTCATAA 58.999 40.000 0.00 0.00 45.65 1.90
503 504 6.488683 CCCAGAAGTTTTGTACTGGTCATAAA 59.511 38.462 0.00 0.00 45.65 1.40
504 505 7.308589 CCCAGAAGTTTTGTACTGGTCATAAAG 60.309 40.741 0.00 0.00 45.65 1.85
505 506 7.308589 CCAGAAGTTTTGTACTGGTCATAAAGG 60.309 40.741 0.00 0.00 43.16 3.11
506 507 7.444183 CAGAAGTTTTGTACTGGTCATAAAGGA 59.556 37.037 0.00 0.00 37.12 3.36
507 508 8.164070 AGAAGTTTTGTACTGGTCATAAAGGAT 58.836 33.333 0.00 0.00 37.12 3.24
508 509 9.444600 GAAGTTTTGTACTGGTCATAAAGGATA 57.555 33.333 0.00 0.00 37.12 2.59
509 510 9.449719 AAGTTTTGTACTGGTCATAAAGGATAG 57.550 33.333 0.00 0.00 37.12 2.08
510 511 8.047310 AGTTTTGTACTGGTCATAAAGGATAGG 58.953 37.037 0.00 0.00 35.19 2.57
511 512 7.743116 TTTGTACTGGTCATAAAGGATAGGA 57.257 36.000 0.00 0.00 0.00 2.94
512 513 7.931015 TTGTACTGGTCATAAAGGATAGGAT 57.069 36.000 0.00 0.00 0.00 3.24
513 514 7.540474 TGTACTGGTCATAAAGGATAGGATC 57.460 40.000 0.00 0.00 0.00 3.36
514 515 7.073208 TGTACTGGTCATAAAGGATAGGATCA 58.927 38.462 0.00 0.00 0.00 2.92
515 516 7.734865 TGTACTGGTCATAAAGGATAGGATCAT 59.265 37.037 0.00 0.00 0.00 2.45
516 517 7.251321 ACTGGTCATAAAGGATAGGATCATC 57.749 40.000 0.00 0.00 0.00 2.92
517 518 6.789457 ACTGGTCATAAAGGATAGGATCATCA 59.211 38.462 0.00 0.00 0.00 3.07
518 519 7.460402 ACTGGTCATAAAGGATAGGATCATCAT 59.540 37.037 0.00 0.00 0.00 2.45
519 520 8.223378 TGGTCATAAAGGATAGGATCATCATT 57.777 34.615 0.00 0.00 30.60 2.57
520 521 8.105197 TGGTCATAAAGGATAGGATCATCATTG 58.895 37.037 0.00 0.00 29.91 2.82
521 522 8.105829 GGTCATAAAGGATAGGATCATCATTGT 58.894 37.037 0.00 0.00 29.91 2.71
524 525 9.948964 CATAAAGGATAGGATCATCATTGTACA 57.051 33.333 0.00 0.00 29.91 2.90
527 528 8.915057 AAGGATAGGATCATCATTGTACAAAG 57.085 34.615 13.23 8.59 28.38 2.77
528 529 7.456725 AGGATAGGATCATCATTGTACAAAGG 58.543 38.462 13.23 8.28 0.00 3.11
529 530 6.656693 GGATAGGATCATCATTGTACAAAGGG 59.343 42.308 13.23 5.71 0.00 3.95
530 531 5.456921 AGGATCATCATTGTACAAAGGGT 57.543 39.130 13.23 1.24 0.00 4.34
531 532 5.831103 AGGATCATCATTGTACAAAGGGTT 58.169 37.500 13.23 0.18 0.00 4.11
532 533 6.256053 AGGATCATCATTGTACAAAGGGTTT 58.744 36.000 13.23 0.00 0.00 3.27
533 534 6.153340 AGGATCATCATTGTACAAAGGGTTTG 59.847 38.462 13.23 5.34 45.95 2.93
545 546 5.362556 CAAAGGGTTTGTGACACATCTAG 57.637 43.478 9.55 0.00 35.94 2.43
546 547 4.974645 AAGGGTTTGTGACACATCTAGA 57.025 40.909 9.55 0.00 32.57 2.43
547 548 5.505181 AAGGGTTTGTGACACATCTAGAT 57.495 39.130 9.55 0.00 32.57 1.98
548 549 4.836825 AGGGTTTGTGACACATCTAGATG 58.163 43.478 27.63 27.63 44.15 2.90
549 550 8.651859 CAAAGGGTTTGTGACACATCTAGATGT 61.652 40.741 28.95 28.95 42.64 3.06
573 574 9.529325 TGTAACATAGTTATGTCACATCTAAGC 57.471 33.333 4.50 0.00 45.55 3.09
574 575 9.751542 GTAACATAGTTATGTCACATCTAAGCT 57.248 33.333 0.00 0.00 45.55 3.74
575 576 8.654230 AACATAGTTATGTCACATCTAAGCTG 57.346 34.615 0.00 0.00 45.55 4.24
576 577 8.011844 ACATAGTTATGTCACATCTAAGCTGA 57.988 34.615 0.00 0.00 42.96 4.26
577 578 8.646004 ACATAGTTATGTCACATCTAAGCTGAT 58.354 33.333 0.00 0.00 42.96 2.90
578 579 8.923683 CATAGTTATGTCACATCTAAGCTGATG 58.076 37.037 11.48 11.48 46.61 3.07
586 587 4.669206 CATCTAAGCTGATGTCCACTCT 57.331 45.455 5.99 0.00 39.05 3.24
587 588 4.370049 CATCTAAGCTGATGTCCACTCTG 58.630 47.826 5.99 0.00 39.05 3.35
588 589 3.435275 TCTAAGCTGATGTCCACTCTGT 58.565 45.455 0.00 0.00 0.00 3.41
589 590 3.834813 TCTAAGCTGATGTCCACTCTGTT 59.165 43.478 0.00 0.00 0.00 3.16
590 591 3.498774 AAGCTGATGTCCACTCTGTTT 57.501 42.857 0.00 0.00 0.00 2.83
591 592 2.775890 AGCTGATGTCCACTCTGTTTG 58.224 47.619 0.00 0.00 0.00 2.93
592 593 2.105477 AGCTGATGTCCACTCTGTTTGT 59.895 45.455 0.00 0.00 0.00 2.83
593 594 3.324846 AGCTGATGTCCACTCTGTTTGTA 59.675 43.478 0.00 0.00 0.00 2.41
594 595 3.681897 GCTGATGTCCACTCTGTTTGTAG 59.318 47.826 0.00 0.00 0.00 2.74
595 596 4.800914 GCTGATGTCCACTCTGTTTGTAGT 60.801 45.833 0.00 0.00 0.00 2.73
596 597 4.883083 TGATGTCCACTCTGTTTGTAGTC 58.117 43.478 0.00 0.00 0.00 2.59
597 598 4.588951 TGATGTCCACTCTGTTTGTAGTCT 59.411 41.667 0.00 0.00 0.00 3.24
598 599 5.773176 TGATGTCCACTCTGTTTGTAGTCTA 59.227 40.000 0.00 0.00 0.00 2.59
599 600 6.437477 TGATGTCCACTCTGTTTGTAGTCTAT 59.563 38.462 0.00 0.00 0.00 1.98
600 601 6.665992 TGTCCACTCTGTTTGTAGTCTATT 57.334 37.500 0.00 0.00 0.00 1.73
601 602 7.062749 TGTCCACTCTGTTTGTAGTCTATTT 57.937 36.000 0.00 0.00 0.00 1.40
602 603 7.506114 TGTCCACTCTGTTTGTAGTCTATTTT 58.494 34.615 0.00 0.00 0.00 1.82
603 604 7.990886 TGTCCACTCTGTTTGTAGTCTATTTTT 59.009 33.333 0.00 0.00 0.00 1.94
645 646 9.494479 CTTATTGCTGCATTTATATATTCGTGG 57.506 33.333 1.84 0.00 0.00 4.94
646 647 5.878332 TGCTGCATTTATATATTCGTGGG 57.122 39.130 0.00 0.00 0.00 4.61
647 648 5.555966 TGCTGCATTTATATATTCGTGGGA 58.444 37.500 0.00 0.00 0.00 4.37
648 649 5.643348 TGCTGCATTTATATATTCGTGGGAG 59.357 40.000 0.00 0.00 0.00 4.30
649 650 5.643777 GCTGCATTTATATATTCGTGGGAGT 59.356 40.000 0.00 0.00 0.00 3.85
650 651 6.149474 GCTGCATTTATATATTCGTGGGAGTT 59.851 38.462 0.00 0.00 0.00 3.01
651 652 7.308589 GCTGCATTTATATATTCGTGGGAGTTT 60.309 37.037 0.00 0.00 0.00 2.66
652 653 9.214957 CTGCATTTATATATTCGTGGGAGTTTA 57.785 33.333 0.00 0.00 0.00 2.01
653 654 9.214957 TGCATTTATATATTCGTGGGAGTTTAG 57.785 33.333 0.00 0.00 0.00 1.85
654 655 9.431887 GCATTTATATATTCGTGGGAGTTTAGA 57.568 33.333 0.00 0.00 0.00 2.10
661 662 5.925506 TTCGTGGGAGTTTAGATATGACA 57.074 39.130 0.00 0.00 0.00 3.58
662 663 6.479972 TTCGTGGGAGTTTAGATATGACAT 57.520 37.500 0.00 0.00 0.00 3.06
663 664 6.085555 TCGTGGGAGTTTAGATATGACATC 57.914 41.667 0.00 0.00 0.00 3.06
664 665 5.010719 TCGTGGGAGTTTAGATATGACATCC 59.989 44.000 0.00 0.00 0.00 3.51
665 666 5.011125 CGTGGGAGTTTAGATATGACATCCT 59.989 44.000 0.00 0.00 0.00 3.24
666 667 6.463049 CGTGGGAGTTTAGATATGACATCCTT 60.463 42.308 0.00 0.00 0.00 3.36
667 668 7.255836 CGTGGGAGTTTAGATATGACATCCTTA 60.256 40.741 0.00 0.00 0.00 2.69
668 669 8.429641 GTGGGAGTTTAGATATGACATCCTTAA 58.570 37.037 0.00 0.00 0.00 1.85
669 670 8.998814 TGGGAGTTTAGATATGACATCCTTAAA 58.001 33.333 0.00 0.00 0.00 1.52
670 671 9.847224 GGGAGTTTAGATATGACATCCTTAAAA 57.153 33.333 0.00 0.00 0.00 1.52
698 699 7.845483 CATCTAGATGTGAATTAGACAAACCG 58.155 38.462 22.42 0.00 34.23 4.44
699 700 6.931838 TCTAGATGTGAATTAGACAAACCGT 58.068 36.000 0.00 0.00 0.00 4.83
700 701 7.033791 TCTAGATGTGAATTAGACAAACCGTC 58.966 38.462 0.00 0.00 45.77 4.79
716 717 1.937899 CCGTCTTTCAAAACCGACTGT 59.062 47.619 0.00 0.00 0.00 3.55
729 730 5.407407 AACCGACTGTAATCTGACTGAAT 57.593 39.130 0.00 0.00 0.00 2.57
744 745 4.164294 GACTGAATTACTCGCGTTACAGT 58.836 43.478 5.77 12.79 39.50 3.55
753 754 3.251729 ACTCGCGTTACAGTCTTACAGAA 59.748 43.478 5.77 0.00 0.00 3.02
847 867 0.033601 GGAGCTGTCCCTCTCTCTGA 60.034 60.000 0.00 0.00 36.76 3.27
899 919 2.484287 AATCGTCAACCCAGCCCAGG 62.484 60.000 0.00 0.00 0.00 4.45
959 986 4.890306 GCCCTCCTCCTCCCCTCC 62.890 77.778 0.00 0.00 0.00 4.30
1341 1384 3.791586 GAGGACCTGCAGGGAGCC 61.792 72.222 35.42 29.89 44.83 4.70
1512 1556 1.497309 TTCTTTCCCCCGTGCATCCT 61.497 55.000 0.00 0.00 0.00 3.24
1520 1564 3.536917 CGTGCATCCTAGGCCGGA 61.537 66.667 5.05 1.40 37.50 5.14
1698 1743 4.338379 ACACCTTCTACTGTTCTTGACC 57.662 45.455 0.00 0.00 0.00 4.02
1743 1788 3.071892 TCACCGGACCATTTACTTCACTT 59.928 43.478 9.46 0.00 0.00 3.16
1770 1815 1.667724 GTCACATTCTCGCAATCCCAG 59.332 52.381 0.00 0.00 0.00 4.45
1783 1828 3.565063 GCAATCCCAGTGCACAAATTTTT 59.435 39.130 21.04 2.39 41.80 1.94
1784 1829 4.555116 GCAATCCCAGTGCACAAATTTTTG 60.555 41.667 21.04 15.19 41.80 2.44
1785 1830 2.559440 TCCCAGTGCACAAATTTTTGC 58.441 42.857 21.04 19.97 41.79 3.68
1786 1831 2.093288 TCCCAGTGCACAAATTTTTGCA 60.093 40.909 24.33 24.33 46.43 4.08
1819 1864 8.006298 TGTTCCAGTAACAATCTTCACAATTT 57.994 30.769 0.00 0.00 45.11 1.82
1823 1868 7.502226 TCCAGTAACAATCTTCACAATTTCACT 59.498 33.333 0.00 0.00 0.00 3.41
1824 1869 7.592533 CCAGTAACAATCTTCACAATTTCACTG 59.407 37.037 0.00 0.00 0.00 3.66
1831 1876 9.146984 CAATCTTCACAATTTCACTGCAATTAT 57.853 29.630 0.00 0.00 0.00 1.28
1836 1881 5.640357 CACAATTTCACTGCAATTATTGGCT 59.360 36.000 7.08 0.00 0.00 4.75
1837 1882 5.870978 ACAATTTCACTGCAATTATTGGCTC 59.129 36.000 7.08 0.00 0.00 4.70
1913 1969 3.781079 ACATATTTCCATGTGTTGGCG 57.219 42.857 0.00 0.00 46.01 5.69
2032 2088 0.109735 CCCGCTTTCGCCTTTTTCTC 60.110 55.000 0.00 0.00 0.00 2.87
2069 2125 1.336609 GCAAAGCAAAGCAGGAAGGAG 60.337 52.381 0.00 0.00 0.00 3.69
2106 2163 3.574284 TTCTGGTGAAAAATGCATCCG 57.426 42.857 0.00 0.00 0.00 4.18
2189 2253 3.303593 CGTGTGATGCCATGCTATCTTTC 60.304 47.826 8.34 2.22 0.00 2.62
2270 2337 9.106070 GGTAGTTGGAGTTGTATGGTTAATTAG 57.894 37.037 0.00 0.00 0.00 1.73
2359 2429 4.543590 AGTGACTTCTGATTGGTGGTAG 57.456 45.455 0.00 0.00 0.00 3.18
2362 2432 5.542635 AGTGACTTCTGATTGGTGGTAGTAA 59.457 40.000 0.00 0.00 0.00 2.24
2368 2439 7.234988 ACTTCTGATTGGTGGTAGTAAGTAGTT 59.765 37.037 0.00 0.00 0.00 2.24
2370 2441 8.654485 TCTGATTGGTGGTAGTAAGTAGTTAA 57.346 34.615 0.00 0.00 0.00 2.01
2396 2467 0.327591 AGCAGCAGGGAAAAGAGAGG 59.672 55.000 0.00 0.00 0.00 3.69
2417 2488 2.362889 GACATGGTGCCAAGGGGG 60.363 66.667 0.00 0.00 40.85 5.40
2430 2501 2.762327 CCAAGGGGGATGAGAATTGTTG 59.238 50.000 0.00 0.00 40.01 3.33
2431 2502 3.434309 CAAGGGGGATGAGAATTGTTGT 58.566 45.455 0.00 0.00 0.00 3.32
2432 2503 3.833559 AGGGGGATGAGAATTGTTGTT 57.166 42.857 0.00 0.00 0.00 2.83
2433 2504 3.434309 AGGGGGATGAGAATTGTTGTTG 58.566 45.455 0.00 0.00 0.00 3.33
2443 2514 4.624015 AGAATTGTTGTTGTTGCCATCAG 58.376 39.130 0.00 0.00 0.00 2.90
2497 2568 6.958752 CAATTAGTGCAATTGTCGATAAACGA 59.041 34.615 7.40 0.00 45.71 3.85
2554 2626 2.363359 GGGGCTTCATGATCATTTCACC 59.637 50.000 5.16 5.79 37.11 4.02
2570 2642 3.485463 TCACCAAACACTAGGTTCCTG 57.515 47.619 1.12 0.00 39.29 3.86
2691 2770 2.993899 CTCCGTGATGGTTACAGAACAC 59.006 50.000 0.00 0.00 37.29 3.32
2692 2771 2.365941 TCCGTGATGGTTACAGAACACA 59.634 45.455 0.00 0.00 37.29 3.72
2693 2772 3.135225 CCGTGATGGTTACAGAACACAA 58.865 45.455 0.00 0.00 37.29 3.33
2694 2773 3.186409 CCGTGATGGTTACAGAACACAAG 59.814 47.826 0.00 0.00 37.29 3.16
2695 2774 4.055360 CGTGATGGTTACAGAACACAAGA 58.945 43.478 0.00 0.00 37.29 3.02
2696 2775 4.150627 CGTGATGGTTACAGAACACAAGAG 59.849 45.833 0.00 0.00 37.29 2.85
2697 2776 4.065088 TGATGGTTACAGAACACAAGAGC 58.935 43.478 0.00 0.00 37.29 4.09
2698 2777 2.846193 TGGTTACAGAACACAAGAGCC 58.154 47.619 0.00 0.00 37.29 4.70
2699 2778 2.171659 TGGTTACAGAACACAAGAGCCA 59.828 45.455 0.00 0.00 37.29 4.75
2700 2779 2.808543 GGTTACAGAACACAAGAGCCAG 59.191 50.000 0.00 0.00 37.29 4.85
2701 2780 3.494398 GGTTACAGAACACAAGAGCCAGA 60.494 47.826 0.00 0.00 37.29 3.86
2702 2781 2.246719 ACAGAACACAAGAGCCAGAC 57.753 50.000 0.00 0.00 0.00 3.51
2703 2782 1.486310 ACAGAACACAAGAGCCAGACA 59.514 47.619 0.00 0.00 0.00 3.41
2704 2783 2.141517 CAGAACACAAGAGCCAGACAG 58.858 52.381 0.00 0.00 0.00 3.51
2705 2784 2.042464 AGAACACAAGAGCCAGACAGA 58.958 47.619 0.00 0.00 0.00 3.41
2712 2791 3.322318 GAGCCAGACAGACAGGGGC 62.322 68.421 0.00 0.00 44.92 5.80
2853 2933 1.069296 TGTCGATCGCTTGGCTTTTTG 60.069 47.619 11.09 0.00 0.00 2.44
3059 3139 2.489938 TTCGGCTTTTCTGCACCTAT 57.510 45.000 0.00 0.00 34.04 2.57
3109 3189 5.615289 AGTTTCTGAATGTTGCTAGTCAGT 58.385 37.500 11.36 0.00 41.92 3.41
3240 3320 5.395768 GCTTGTCATCAGAGGTACCTATGTT 60.396 44.000 30.58 22.27 36.71 2.71
3421 3501 9.262472 CTAATTACGTTTGTTAGATCACAAAGC 57.738 33.333 10.67 6.45 45.23 3.51
3602 3686 5.477984 TCCACGCGGTAGAATTTAGGTATAT 59.522 40.000 12.47 0.00 0.00 0.86
3603 3687 6.658816 TCCACGCGGTAGAATTTAGGTATATA 59.341 38.462 12.47 0.00 0.00 0.86
3651 3735 1.373570 GCATTCGGAGGACTGAAAGG 58.626 55.000 0.00 0.00 43.39 3.11
3721 3808 5.926214 TTGCACCACATCATTTTCAAATG 57.074 34.783 5.99 5.99 45.49 2.32
3731 3818 7.279313 CACATCATTTTCAAATGGAAAGGATCC 59.721 37.037 10.52 2.48 45.70 3.36
3777 3864 0.038892 GTGGATGCCAGCACAACAAG 60.039 55.000 0.00 0.00 32.34 3.16
3965 4053 3.081804 GGTCAACCACCATCTCGAATTT 58.918 45.455 0.00 0.00 45.98 1.82
3966 4054 3.127030 GGTCAACCACCATCTCGAATTTC 59.873 47.826 0.00 0.00 45.98 2.17
3967 4055 3.000041 TCAACCACCATCTCGAATTTCG 59.000 45.455 12.54 12.54 42.10 3.46
3969 4057 2.618053 ACCACCATCTCGAATTTCGAC 58.382 47.619 17.08 0.00 44.82 4.20
3999 4087 6.735130 ACCCGATTAACTCTCTTTGTTTTTG 58.265 36.000 0.00 0.00 0.00 2.44
4053 4141 2.153645 TGCTCAATTGCCACTGTACTG 58.846 47.619 0.00 0.00 0.00 2.74
4257 4345 2.825264 CCGATCTCCCTTGCCTCC 59.175 66.667 0.00 0.00 0.00 4.30
4278 4366 1.144936 CATCTCCTCCGCAACCTCC 59.855 63.158 0.00 0.00 0.00 4.30
4372 4460 3.411351 CTCGGTTGGTGAACGGCG 61.411 66.667 4.80 4.80 33.51 6.46
4373 4461 4.973055 TCGGTTGGTGAACGGCGG 62.973 66.667 13.24 0.00 33.51 6.13
4428 4516 1.745890 CGGTGGACAGTGAAGTGGA 59.254 57.895 0.00 0.00 0.00 4.02
4456 4544 1.202806 TCTTTCAGCCAGGGACAGTTG 60.203 52.381 0.00 0.00 0.00 3.16
4468 4556 3.053619 AGGGACAGTTGTTCAGAAGGTTT 60.054 43.478 0.00 0.00 0.00 3.27
4471 4559 4.035675 GGACAGTTGTTCAGAAGGTTTGAG 59.964 45.833 0.00 0.00 0.00 3.02
4588 4680 2.168496 GCCCTACCTTTTTCCTGTTCC 58.832 52.381 0.00 0.00 0.00 3.62
4794 4924 8.644374 TTATAGGAGGTACAAATGCAAAGTTT 57.356 30.769 0.00 0.00 0.00 2.66
4795 4925 9.742144 TTATAGGAGGTACAAATGCAAAGTTTA 57.258 29.630 0.00 0.00 0.00 2.01
4800 4930 9.699703 GGAGGTACAAATGCAAAGTTTATTTTA 57.300 29.630 0.00 0.00 0.00 1.52
4860 4991 7.734865 TGGAAGATAATCTACCTATCATGTGGT 59.265 37.037 11.24 11.24 40.12 4.16
4943 5075 7.590689 GTCAGATAACCTTAGTTATAGTGCGTC 59.409 40.741 0.00 0.00 46.83 5.19
5007 5179 5.809562 AGAGCGTCAAGAACTCAAGATATTG 59.190 40.000 0.00 0.00 32.71 1.90
5030 5215 2.595881 GCGTGTAAATTACGTGATCCGC 60.596 50.000 0.00 2.14 43.09 5.54
5036 5221 3.520290 AATTACGTGATCCGCTGAAGA 57.480 42.857 0.00 0.00 41.42 2.87
5037 5222 3.735237 ATTACGTGATCCGCTGAAGAT 57.265 42.857 0.00 0.00 41.42 2.40
5038 5223 4.848562 ATTACGTGATCCGCTGAAGATA 57.151 40.909 0.00 0.00 41.42 1.98
5039 5224 4.848562 TTACGTGATCCGCTGAAGATAT 57.151 40.909 0.00 0.00 41.42 1.63
5055 5240 9.844257 GCTGAAGATATATATTAGGGCATCTTT 57.156 33.333 7.33 0.00 33.93 2.52
5121 5307 2.936202 TGAACAAGGAGAAGCAGCTTT 58.064 42.857 9.62 0.00 0.00 3.51
5174 5379 0.251341 CTGGGGGTCAGTTGGAAAGG 60.251 60.000 0.00 0.00 38.64 3.11
5203 5408 7.466746 AAAAATTACTGTCACATGCACCTAT 57.533 32.000 0.00 0.00 0.00 2.57
5220 5425 6.378848 TGCACCTATAATTTTCAGGTTTACCC 59.621 38.462 3.29 0.00 40.77 3.69
5241 5446 6.306987 ACCCACAAATGTTCAGACTAAATCT 58.693 36.000 0.00 0.00 38.66 2.40
5258 5463 1.989706 TCTGCCAAACCCACTAAACC 58.010 50.000 0.00 0.00 0.00 3.27
5264 5469 2.290464 CAAACCCACTAAACCACACGA 58.710 47.619 0.00 0.00 0.00 4.35
5283 5488 0.530650 ATCCATCGTCAAATCGCGCT 60.531 50.000 5.56 0.00 0.00 5.92
5288 5493 1.225475 CGTCAAATCGCGCTGTGTC 60.225 57.895 5.56 0.00 0.00 3.67
5309 5514 3.201487 TCGATCAGTAGGGGTAACAGAGA 59.799 47.826 0.00 0.00 39.74 3.10
5311 5516 4.022762 CGATCAGTAGGGGTAACAGAGATG 60.023 50.000 0.00 0.00 39.74 2.90
5337 5542 5.826643 ACATATAGAAAAGCAAACAGGGGA 58.173 37.500 0.00 0.00 0.00 4.81
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.965486 TGAGCCCTTTGATATCCTCTACTA 58.035 41.667 0.00 0.00 0.00 1.82
1 2 4.820775 TGAGCCCTTTGATATCCTCTACT 58.179 43.478 0.00 0.00 0.00 2.57
2 3 5.486526 CATGAGCCCTTTGATATCCTCTAC 58.513 45.833 0.00 0.00 0.00 2.59
3 4 4.019860 GCATGAGCCCTTTGATATCCTCTA 60.020 45.833 0.00 0.00 33.58 2.43
4 5 3.244840 GCATGAGCCCTTTGATATCCTCT 60.245 47.826 0.00 0.00 33.58 3.69
5 6 3.080319 GCATGAGCCCTTTGATATCCTC 58.920 50.000 0.00 0.00 33.58 3.71
6 7 2.715336 AGCATGAGCCCTTTGATATCCT 59.285 45.455 0.00 0.00 43.56 3.24
7 8 2.818432 CAGCATGAGCCCTTTGATATCC 59.182 50.000 0.00 0.00 43.56 2.59
8 9 3.748083 TCAGCATGAGCCCTTTGATATC 58.252 45.455 0.00 0.00 42.56 1.63
9 10 3.870538 TCAGCATGAGCCCTTTGATAT 57.129 42.857 0.00 0.00 42.56 1.63
21 22 5.299450 GCATCCTTGCCAATTCAGCATGA 62.299 47.826 12.19 7.80 43.43 3.07
22 23 2.821546 CATCCTTGCCAATTCAGCATG 58.178 47.619 0.69 3.77 40.59 4.06
23 24 1.138266 GCATCCTTGCCAATTCAGCAT 59.862 47.619 0.69 0.00 43.38 3.79
24 25 0.533491 GCATCCTTGCCAATTCAGCA 59.467 50.000 0.00 0.00 43.38 4.41
25 26 3.357504 GCATCCTTGCCAATTCAGC 57.642 52.632 0.00 0.00 43.38 4.26
34 35 4.287186 CCAAGTGACCTTGCATCCTTGC 62.287 54.545 9.64 0.00 45.57 4.01
35 36 1.542915 CCAAGTGACCTTGCATCCTTG 59.457 52.381 0.00 0.00 45.57 3.61
36 37 1.425066 TCCAAGTGACCTTGCATCCTT 59.575 47.619 0.00 0.00 45.57 3.36
37 38 1.004044 CTCCAAGTGACCTTGCATCCT 59.996 52.381 0.00 0.00 45.57 3.24
38 39 1.003580 TCTCCAAGTGACCTTGCATCC 59.996 52.381 0.00 0.00 45.57 3.51
39 40 2.079925 GTCTCCAAGTGACCTTGCATC 58.920 52.381 0.00 0.00 45.57 3.91
40 41 1.609061 CGTCTCCAAGTGACCTTGCAT 60.609 52.381 0.00 0.00 45.57 3.96
41 42 0.249868 CGTCTCCAAGTGACCTTGCA 60.250 55.000 0.00 0.00 45.57 4.08
42 43 0.951040 CCGTCTCCAAGTGACCTTGC 60.951 60.000 0.00 0.00 45.57 4.01
43 44 0.679505 TCCGTCTCCAAGTGACCTTG 59.320 55.000 0.00 0.00 46.33 3.61
44 45 0.969894 CTCCGTCTCCAAGTGACCTT 59.030 55.000 0.00 0.00 0.00 3.50
45 46 0.900647 CCTCCGTCTCCAAGTGACCT 60.901 60.000 0.00 0.00 0.00 3.85
46 47 1.186267 ACCTCCGTCTCCAAGTGACC 61.186 60.000 0.00 0.00 0.00 4.02
47 48 0.244178 GACCTCCGTCTCCAAGTGAC 59.756 60.000 0.00 0.00 35.99 3.67
48 49 0.112606 AGACCTCCGTCTCCAAGTGA 59.887 55.000 0.00 0.00 46.90 3.41
49 50 0.244994 CAGACCTCCGTCTCCAAGTG 59.755 60.000 0.00 0.00 46.90 3.16
50 51 1.536943 GCAGACCTCCGTCTCCAAGT 61.537 60.000 0.00 0.00 46.90 3.16
51 52 1.216710 GCAGACCTCCGTCTCCAAG 59.783 63.158 0.00 0.00 46.90 3.61
52 53 2.636412 CGCAGACCTCCGTCTCCAA 61.636 63.158 0.00 0.00 46.90 3.53
53 54 3.062466 CGCAGACCTCCGTCTCCA 61.062 66.667 0.00 0.00 46.90 3.86
54 55 2.341101 TTCGCAGACCTCCGTCTCC 61.341 63.158 0.00 0.00 46.90 3.71
55 56 1.153997 GTTCGCAGACCTCCGTCTC 60.154 63.158 0.00 0.00 46.90 3.36
57 58 0.599204 TTTGTTCGCAGACCTCCGTC 60.599 55.000 0.00 0.00 39.50 4.79
58 59 0.600255 CTTTGTTCGCAGACCTCCGT 60.600 55.000 0.00 0.00 34.32 4.69
59 60 1.901650 GCTTTGTTCGCAGACCTCCG 61.902 60.000 0.00 0.00 34.32 4.63
60 61 0.603975 AGCTTTGTTCGCAGACCTCC 60.604 55.000 0.00 0.00 34.32 4.30
61 62 0.514691 CAGCTTTGTTCGCAGACCTC 59.485 55.000 0.00 0.00 34.32 3.85
62 63 1.510480 GCAGCTTTGTTCGCAGACCT 61.510 55.000 0.00 0.00 34.32 3.85
63 64 1.081840 GCAGCTTTGTTCGCAGACC 60.082 57.895 0.00 0.00 34.32 3.85
64 65 0.110464 GAGCAGCTTTGTTCGCAGAC 60.110 55.000 0.00 0.00 34.32 3.51
65 66 0.532640 TGAGCAGCTTTGTTCGCAGA 60.533 50.000 0.00 0.00 0.00 4.26
66 67 0.385223 GTGAGCAGCTTTGTTCGCAG 60.385 55.000 0.00 0.00 31.36 5.18
67 68 1.094650 TGTGAGCAGCTTTGTTCGCA 61.095 50.000 0.00 2.57 37.23 5.10
68 69 0.658536 GTGTGAGCAGCTTTGTTCGC 60.659 55.000 0.00 0.00 0.00 4.70
69 70 0.940126 AGTGTGAGCAGCTTTGTTCG 59.060 50.000 0.00 0.00 0.00 3.95
70 71 2.216898 AGAGTGTGAGCAGCTTTGTTC 58.783 47.619 0.00 0.00 0.00 3.18
71 72 2.338577 AGAGTGTGAGCAGCTTTGTT 57.661 45.000 0.00 0.00 0.00 2.83
72 73 1.945394 CAAGAGTGTGAGCAGCTTTGT 59.055 47.619 0.00 0.00 0.00 2.83
73 74 1.334779 GCAAGAGTGTGAGCAGCTTTG 60.335 52.381 0.00 0.00 0.00 2.77
74 75 0.950116 GCAAGAGTGTGAGCAGCTTT 59.050 50.000 0.00 0.00 0.00 3.51
75 76 0.888285 GGCAAGAGTGTGAGCAGCTT 60.888 55.000 0.00 0.00 0.00 3.74
76 77 1.302351 GGCAAGAGTGTGAGCAGCT 60.302 57.895 0.00 0.00 0.00 4.24
77 78 1.168407 TTGGCAAGAGTGTGAGCAGC 61.168 55.000 0.00 0.00 0.00 5.25
78 79 0.873054 CTTGGCAAGAGTGTGAGCAG 59.127 55.000 22.64 0.00 0.00 4.24
79 80 1.168407 GCTTGGCAAGAGTGTGAGCA 61.168 55.000 30.45 0.00 0.00 4.26
80 81 0.888285 AGCTTGGCAAGAGTGTGAGC 60.888 55.000 30.45 13.33 0.00 4.26
81 82 2.344950 CTAGCTTGGCAAGAGTGTGAG 58.655 52.381 30.45 12.52 0.00 3.51
82 83 1.609061 GCTAGCTTGGCAAGAGTGTGA 60.609 52.381 30.45 7.13 0.00 3.58
83 84 0.801251 GCTAGCTTGGCAAGAGTGTG 59.199 55.000 30.45 14.81 0.00 3.82
84 85 0.689623 AGCTAGCTTGGCAAGAGTGT 59.310 50.000 30.45 13.27 0.00 3.55
85 86 1.085091 CAGCTAGCTTGGCAAGAGTG 58.915 55.000 30.45 18.07 0.00 3.51
86 87 0.689623 ACAGCTAGCTTGGCAAGAGT 59.310 50.000 30.45 18.13 0.00 3.24
87 88 2.548875 CTACAGCTAGCTTGGCAAGAG 58.451 52.381 30.45 19.79 0.00 2.85
88 89 1.208052 CCTACAGCTAGCTTGGCAAGA 59.792 52.381 30.45 9.93 0.00 3.02
89 90 1.208052 TCCTACAGCTAGCTTGGCAAG 59.792 52.381 22.75 22.75 0.00 4.01
90 91 1.208052 CTCCTACAGCTAGCTTGGCAA 59.792 52.381 16.46 0.00 0.00 4.52
91 92 0.826715 CTCCTACAGCTAGCTTGGCA 59.173 55.000 16.46 7.19 0.00 4.92
92 93 1.115467 TCTCCTACAGCTAGCTTGGC 58.885 55.000 16.46 0.00 0.00 4.52
93 94 2.961741 TCATCTCCTACAGCTAGCTTGG 59.038 50.000 16.46 17.16 0.00 3.61
94 95 4.099266 ACTTCATCTCCTACAGCTAGCTTG 59.901 45.833 16.46 13.22 0.00 4.01
95 96 4.099266 CACTTCATCTCCTACAGCTAGCTT 59.901 45.833 16.46 9.48 0.00 3.74
96 97 3.636300 CACTTCATCTCCTACAGCTAGCT 59.364 47.826 12.68 12.68 0.00 3.32
97 98 3.383185 ACACTTCATCTCCTACAGCTAGC 59.617 47.826 6.62 6.62 0.00 3.42
98 99 4.736168 GCACACTTCATCTCCTACAGCTAG 60.736 50.000 0.00 0.00 0.00 3.42
99 100 3.131223 GCACACTTCATCTCCTACAGCTA 59.869 47.826 0.00 0.00 0.00 3.32
100 101 2.093764 GCACACTTCATCTCCTACAGCT 60.094 50.000 0.00 0.00 0.00 4.24
101 102 2.093764 AGCACACTTCATCTCCTACAGC 60.094 50.000 0.00 0.00 0.00 4.40
102 103 3.883830 AGCACACTTCATCTCCTACAG 57.116 47.619 0.00 0.00 0.00 2.74
103 104 3.306989 CCAAGCACACTTCATCTCCTACA 60.307 47.826 0.00 0.00 32.29 2.74
104 105 3.055819 TCCAAGCACACTTCATCTCCTAC 60.056 47.826 0.00 0.00 32.29 3.18
105 106 3.173151 TCCAAGCACACTTCATCTCCTA 58.827 45.455 0.00 0.00 32.29 2.94
106 107 1.980765 TCCAAGCACACTTCATCTCCT 59.019 47.619 0.00 0.00 32.29 3.69
107 108 2.479566 TCCAAGCACACTTCATCTCC 57.520 50.000 0.00 0.00 32.29 3.71
108 109 3.128242 CCATTCCAAGCACACTTCATCTC 59.872 47.826 0.00 0.00 32.29 2.75
109 110 3.087031 CCATTCCAAGCACACTTCATCT 58.913 45.455 0.00 0.00 32.29 2.90
110 111 2.416431 GCCATTCCAAGCACACTTCATC 60.416 50.000 0.00 0.00 32.29 2.92
111 112 1.547372 GCCATTCCAAGCACACTTCAT 59.453 47.619 0.00 0.00 32.29 2.57
112 113 0.961019 GCCATTCCAAGCACACTTCA 59.039 50.000 0.00 0.00 32.29 3.02
113 114 0.109597 CGCCATTCCAAGCACACTTC 60.110 55.000 0.00 0.00 32.29 3.01
114 115 1.526575 CCGCCATTCCAAGCACACTT 61.527 55.000 0.00 0.00 36.19 3.16
115 116 1.973281 CCGCCATTCCAAGCACACT 60.973 57.895 0.00 0.00 0.00 3.55
116 117 2.568090 CCGCCATTCCAAGCACAC 59.432 61.111 0.00 0.00 0.00 3.82
117 118 3.372730 GCCGCCATTCCAAGCACA 61.373 61.111 0.00 0.00 0.00 4.57
118 119 2.713967 ATGCCGCCATTCCAAGCAC 61.714 57.895 0.00 0.00 36.06 4.40
119 120 2.362760 ATGCCGCCATTCCAAGCA 60.363 55.556 0.00 0.00 37.94 3.91
120 121 2.105528 CATGCCGCCATTCCAAGC 59.894 61.111 0.00 0.00 0.00 4.01
121 122 1.140161 CACATGCCGCCATTCCAAG 59.860 57.895 0.00 0.00 0.00 3.61
122 123 3.004326 GCACATGCCGCCATTCCAA 62.004 57.895 0.00 0.00 34.31 3.53
123 124 3.451004 GCACATGCCGCCATTCCA 61.451 61.111 0.00 0.00 34.31 3.53
133 134 1.375853 TACAATCAGGCGGCACATGC 61.376 55.000 13.08 0.00 41.14 4.06
134 135 1.265095 GATACAATCAGGCGGCACATG 59.735 52.381 13.08 7.14 0.00 3.21
135 136 1.141657 AGATACAATCAGGCGGCACAT 59.858 47.619 13.08 0.00 0.00 3.21
136 137 0.541392 AGATACAATCAGGCGGCACA 59.459 50.000 13.08 0.00 0.00 4.57
137 138 1.668419 AAGATACAATCAGGCGGCAC 58.332 50.000 13.08 0.00 0.00 5.01
138 139 3.118408 ACTTAAGATACAATCAGGCGGCA 60.118 43.478 13.08 0.00 0.00 5.69
139 140 3.248602 CACTTAAGATACAATCAGGCGGC 59.751 47.826 10.09 0.00 0.00 6.53
140 141 4.442706 ACACTTAAGATACAATCAGGCGG 58.557 43.478 10.09 0.00 0.00 6.13
141 142 7.715265 ATTACACTTAAGATACAATCAGGCG 57.285 36.000 10.09 0.00 0.00 5.52
142 143 8.713271 GCTATTACACTTAAGATACAATCAGGC 58.287 37.037 10.09 5.49 0.00 4.85
143 144 8.916654 CGCTATTACACTTAAGATACAATCAGG 58.083 37.037 10.09 0.37 0.00 3.86
144 145 8.916654 CCGCTATTACACTTAAGATACAATCAG 58.083 37.037 10.09 0.00 0.00 2.90
145 146 8.635328 TCCGCTATTACACTTAAGATACAATCA 58.365 33.333 10.09 0.00 0.00 2.57
146 147 9.640963 ATCCGCTATTACACTTAAGATACAATC 57.359 33.333 10.09 0.00 0.00 2.67
147 148 9.424319 CATCCGCTATTACACTTAAGATACAAT 57.576 33.333 10.09 5.69 0.00 2.71
148 149 8.635328 TCATCCGCTATTACACTTAAGATACAA 58.365 33.333 10.09 0.00 0.00 2.41
149 150 8.173542 TCATCCGCTATTACACTTAAGATACA 57.826 34.615 10.09 0.00 0.00 2.29
150 151 8.512956 TCTCATCCGCTATTACACTTAAGATAC 58.487 37.037 10.09 0.00 0.00 2.24
151 152 8.631480 TCTCATCCGCTATTACACTTAAGATA 57.369 34.615 10.09 0.00 0.00 1.98
152 153 7.526142 TCTCATCCGCTATTACACTTAAGAT 57.474 36.000 10.09 0.00 0.00 2.40
153 154 6.954487 TCTCATCCGCTATTACACTTAAGA 57.046 37.500 10.09 0.00 0.00 2.10
154 155 6.809196 GGATCTCATCCGCTATTACACTTAAG 59.191 42.308 0.00 0.00 40.13 1.85
155 156 6.688578 GGATCTCATCCGCTATTACACTTAA 58.311 40.000 0.00 0.00 40.13 1.85
156 157 6.268825 GGATCTCATCCGCTATTACACTTA 57.731 41.667 0.00 0.00 40.13 2.24
157 158 5.140747 GGATCTCATCCGCTATTACACTT 57.859 43.478 0.00 0.00 40.13 3.16
158 159 4.792521 GGATCTCATCCGCTATTACACT 57.207 45.455 0.00 0.00 40.13 3.55
169 170 1.337635 GCATGGTCTCGGATCTCATCC 60.338 57.143 0.00 0.00 46.22 3.51
170 171 1.617850 AGCATGGTCTCGGATCTCATC 59.382 52.381 0.00 0.00 0.00 2.92
171 172 1.714541 AGCATGGTCTCGGATCTCAT 58.285 50.000 0.00 0.00 0.00 2.90
172 173 1.489481 AAGCATGGTCTCGGATCTCA 58.511 50.000 0.00 0.00 0.00 3.27
173 174 3.735237 TTAAGCATGGTCTCGGATCTC 57.265 47.619 0.00 0.00 0.00 2.75
174 175 4.696479 ATTTAAGCATGGTCTCGGATCT 57.304 40.909 0.00 0.00 0.00 2.75
175 176 6.861065 TTTATTTAAGCATGGTCTCGGATC 57.139 37.500 0.00 0.00 0.00 3.36
176 177 7.823745 AATTTATTTAAGCATGGTCTCGGAT 57.176 32.000 0.00 0.00 0.00 4.18
177 178 7.444183 CCTAATTTATTTAAGCATGGTCTCGGA 59.556 37.037 0.00 0.00 0.00 4.55
178 179 7.228706 ACCTAATTTATTTAAGCATGGTCTCGG 59.771 37.037 0.00 0.00 0.00 4.63
179 180 8.154649 ACCTAATTTATTTAAGCATGGTCTCG 57.845 34.615 0.00 0.00 0.00 4.04
180 181 9.736023 CAACCTAATTTATTTAAGCATGGTCTC 57.264 33.333 0.00 0.00 0.00 3.36
181 182 9.255029 ACAACCTAATTTATTTAAGCATGGTCT 57.745 29.630 0.00 0.00 0.00 3.85
182 183 9.869757 AACAACCTAATTTATTTAAGCATGGTC 57.130 29.630 0.00 0.00 0.00 4.02
186 187 9.884636 GGGAAACAACCTAATTTATTTAAGCAT 57.115 29.630 0.00 0.00 0.00 3.79
187 188 9.095700 AGGGAAACAACCTAATTTATTTAAGCA 57.904 29.630 0.00 0.00 36.32 3.91
216 217 7.148239 GGTGAATCGAACTCAGGATATGTTTTT 60.148 37.037 1.05 0.00 0.00 1.94
217 218 6.316390 GGTGAATCGAACTCAGGATATGTTTT 59.684 38.462 1.05 0.00 0.00 2.43
218 219 5.817816 GGTGAATCGAACTCAGGATATGTTT 59.182 40.000 1.05 0.00 0.00 2.83
219 220 5.104941 TGGTGAATCGAACTCAGGATATGTT 60.105 40.000 1.05 0.00 0.00 2.71
220 221 4.405680 TGGTGAATCGAACTCAGGATATGT 59.594 41.667 1.05 0.00 0.00 2.29
221 222 4.948847 TGGTGAATCGAACTCAGGATATG 58.051 43.478 1.05 0.00 0.00 1.78
222 223 5.305386 TGATGGTGAATCGAACTCAGGATAT 59.695 40.000 1.05 0.00 38.22 1.63
223 224 4.649218 TGATGGTGAATCGAACTCAGGATA 59.351 41.667 1.05 0.00 38.22 2.59
224 225 3.452264 TGATGGTGAATCGAACTCAGGAT 59.548 43.478 1.05 0.00 38.22 3.24
225 226 2.831526 TGATGGTGAATCGAACTCAGGA 59.168 45.455 1.05 0.00 38.22 3.86
226 227 2.932614 GTGATGGTGAATCGAACTCAGG 59.067 50.000 1.05 0.00 38.22 3.86
227 228 2.932614 GGTGATGGTGAATCGAACTCAG 59.067 50.000 1.05 0.00 38.22 3.35
228 229 2.301583 TGGTGATGGTGAATCGAACTCA 59.698 45.455 0.00 0.00 38.22 3.41
229 230 2.972625 TGGTGATGGTGAATCGAACTC 58.027 47.619 0.00 0.00 38.22 3.01
230 231 3.273434 CATGGTGATGGTGAATCGAACT 58.727 45.455 0.00 0.00 38.22 3.01
231 232 3.009723 ACATGGTGATGGTGAATCGAAC 58.990 45.455 0.00 0.00 38.22 3.95
232 233 3.348647 ACATGGTGATGGTGAATCGAA 57.651 42.857 0.00 0.00 38.22 3.71
233 234 3.196685 TGTACATGGTGATGGTGAATCGA 59.803 43.478 0.00 0.00 38.22 3.59
234 235 3.530535 TGTACATGGTGATGGTGAATCG 58.469 45.455 0.00 0.00 38.22 3.34
235 236 4.517285 ACTGTACATGGTGATGGTGAATC 58.483 43.478 0.00 0.00 33.39 2.52
236 237 4.517285 GACTGTACATGGTGATGGTGAAT 58.483 43.478 0.00 0.00 33.39 2.57
237 238 3.307410 GGACTGTACATGGTGATGGTGAA 60.307 47.826 0.00 0.00 33.39 3.18
238 239 2.236146 GGACTGTACATGGTGATGGTGA 59.764 50.000 0.00 0.00 33.39 4.02
239 240 2.237143 AGGACTGTACATGGTGATGGTG 59.763 50.000 0.00 0.00 33.39 4.17
240 241 2.551270 AGGACTGTACATGGTGATGGT 58.449 47.619 0.00 0.00 33.39 3.55
241 242 3.634397 AAGGACTGTACATGGTGATGG 57.366 47.619 0.00 0.00 33.39 3.51
242 243 6.128007 GGTTTAAAGGACTGTACATGGTGATG 60.128 42.308 0.00 0.00 35.49 3.07
243 244 5.944007 GGTTTAAAGGACTGTACATGGTGAT 59.056 40.000 0.00 0.00 0.00 3.06
244 245 5.072600 AGGTTTAAAGGACTGTACATGGTGA 59.927 40.000 0.00 0.00 0.00 4.02
245 246 5.313712 AGGTTTAAAGGACTGTACATGGTG 58.686 41.667 0.00 0.00 0.00 4.17
246 247 5.578157 AGGTTTAAAGGACTGTACATGGT 57.422 39.130 0.00 0.00 0.00 3.55
247 248 6.488683 TGAAAGGTTTAAAGGACTGTACATGG 59.511 38.462 0.00 0.00 0.00 3.66
248 249 7.228706 AGTGAAAGGTTTAAAGGACTGTACATG 59.771 37.037 0.00 0.00 0.00 3.21
249 250 7.228706 CAGTGAAAGGTTTAAAGGACTGTACAT 59.771 37.037 0.00 0.00 0.00 2.29
250 251 6.540914 CAGTGAAAGGTTTAAAGGACTGTACA 59.459 38.462 0.00 0.00 0.00 2.90
251 252 6.764560 TCAGTGAAAGGTTTAAAGGACTGTAC 59.235 38.462 0.00 0.00 33.02 2.90
252 253 6.891388 TCAGTGAAAGGTTTAAAGGACTGTA 58.109 36.000 0.00 0.00 33.02 2.74
253 254 5.751586 TCAGTGAAAGGTTTAAAGGACTGT 58.248 37.500 0.00 0.00 33.02 3.55
254 255 6.055588 TCTCAGTGAAAGGTTTAAAGGACTG 58.944 40.000 0.00 0.00 0.00 3.51
255 256 6.248569 TCTCAGTGAAAGGTTTAAAGGACT 57.751 37.500 0.00 0.00 0.00 3.85
256 257 6.937436 TTCTCAGTGAAAGGTTTAAAGGAC 57.063 37.500 0.00 0.00 0.00 3.85
283 284 3.055167 GGCTGGCCCATTTATCTGTTTTT 60.055 43.478 0.00 0.00 0.00 1.94
284 285 2.501316 GGCTGGCCCATTTATCTGTTTT 59.499 45.455 0.00 0.00 0.00 2.43
285 286 2.110578 GGCTGGCCCATTTATCTGTTT 58.889 47.619 0.00 0.00 0.00 2.83
286 287 1.780503 GGCTGGCCCATTTATCTGTT 58.219 50.000 0.00 0.00 0.00 3.16
287 288 3.520623 GGCTGGCCCATTTATCTGT 57.479 52.632 0.00 0.00 0.00 3.41
298 299 2.746277 CGTGTAACTGGGCTGGCC 60.746 66.667 14.23 14.23 31.75 5.36
299 300 2.746277 CCGTGTAACTGGGCTGGC 60.746 66.667 0.00 0.00 31.75 4.85
300 301 2.746277 GCCGTGTAACTGGGCTGG 60.746 66.667 0.66 0.00 39.82 4.85
303 304 3.431725 GCAGCCGTGTAACTGGGC 61.432 66.667 0.00 0.00 42.78 5.36
304 305 3.118454 CGCAGCCGTGTAACTGGG 61.118 66.667 0.00 0.00 39.96 4.45
305 306 3.118454 CCGCAGCCGTGTAACTGG 61.118 66.667 0.00 0.00 34.38 4.00
306 307 3.118454 CCCGCAGCCGTGTAACTG 61.118 66.667 0.00 0.00 36.96 3.16
321 322 0.528924 AATTTTTCTAACCGGCGCCC 59.471 50.000 23.46 2.84 0.00 6.13
322 323 1.624487 CAATTTTTCTAACCGGCGCC 58.376 50.000 19.07 19.07 0.00 6.53
323 324 0.989164 GCAATTTTTCTAACCGGCGC 59.011 50.000 0.00 0.00 0.00 6.53
324 325 1.624487 GGCAATTTTTCTAACCGGCG 58.376 50.000 0.00 0.00 0.00 6.46
325 326 1.548719 AGGGCAATTTTTCTAACCGGC 59.451 47.619 0.00 0.00 0.00 6.13
326 327 3.953712 AAGGGCAATTTTTCTAACCGG 57.046 42.857 0.00 0.00 0.00 5.28
327 328 5.165676 GGTTAAGGGCAATTTTTCTAACCG 58.834 41.667 0.00 0.00 0.00 4.44
328 329 5.165676 CGGTTAAGGGCAATTTTTCTAACC 58.834 41.667 0.00 0.00 0.00 2.85
329 330 5.165676 CCGGTTAAGGGCAATTTTTCTAAC 58.834 41.667 0.00 0.00 0.00 2.34
330 331 5.394224 CCGGTTAAGGGCAATTTTTCTAA 57.606 39.130 0.00 0.00 0.00 2.10
332 333 3.953712 CCGGTTAAGGGCAATTTTTCT 57.046 42.857 0.00 0.00 0.00 2.52
343 344 4.708386 TGTGGGCGCCGGTTAAGG 62.708 66.667 22.54 0.00 0.00 2.69
344 345 2.670251 TTGTGGGCGCCGGTTAAG 60.670 61.111 22.54 0.00 0.00 1.85
345 346 2.979120 GTTGTGGGCGCCGGTTAA 60.979 61.111 22.54 10.17 0.00 2.01
354 355 2.469516 CCTATTCGGCGTTGTGGGC 61.470 63.158 6.85 0.00 0.00 5.36
355 356 1.817941 CCCTATTCGGCGTTGTGGG 60.818 63.158 6.85 11.33 0.00 4.61
356 357 0.675522 AACCCTATTCGGCGTTGTGG 60.676 55.000 6.85 5.80 0.00 4.17
357 358 1.135803 CAAACCCTATTCGGCGTTGTG 60.136 52.381 6.85 0.00 0.00 3.33
358 359 1.161843 CAAACCCTATTCGGCGTTGT 58.838 50.000 6.85 0.00 0.00 3.32
359 360 0.179174 GCAAACCCTATTCGGCGTTG 60.179 55.000 6.85 2.23 0.00 4.10
360 361 1.310216 GGCAAACCCTATTCGGCGTT 61.310 55.000 6.85 0.00 0.00 4.84
361 362 1.747745 GGCAAACCCTATTCGGCGT 60.748 57.895 6.85 0.00 0.00 5.68
362 363 1.309499 TTGGCAAACCCTATTCGGCG 61.309 55.000 0.00 0.00 33.59 6.46
363 364 0.892063 TTTGGCAAACCCTATTCGGC 59.108 50.000 8.93 0.00 33.59 5.54
364 365 4.340950 ACATATTTGGCAAACCCTATTCGG 59.659 41.667 16.00 1.33 33.59 4.30
365 366 5.514274 ACATATTTGGCAAACCCTATTCG 57.486 39.130 16.00 1.98 33.59 3.34
366 367 5.519722 CGACATATTTGGCAAACCCTATTC 58.480 41.667 16.00 6.46 33.59 1.75
367 368 4.202111 GCGACATATTTGGCAAACCCTATT 60.202 41.667 16.00 0.36 33.59 1.73
368 369 3.317993 GCGACATATTTGGCAAACCCTAT 59.682 43.478 16.00 6.77 33.59 2.57
369 370 2.685897 GCGACATATTTGGCAAACCCTA 59.314 45.455 16.00 4.45 33.59 3.53
370 371 1.476488 GCGACATATTTGGCAAACCCT 59.524 47.619 16.00 1.97 33.59 4.34
371 372 1.470805 GGCGACATATTTGGCAAACCC 60.471 52.381 16.00 3.79 34.07 4.11
372 373 1.476488 AGGCGACATATTTGGCAAACC 59.524 47.619 16.00 9.98 36.56 3.27
373 374 2.939460 AGGCGACATATTTGGCAAAC 57.061 45.000 16.00 0.87 36.56 2.93
374 375 3.348119 TGTAGGCGACATATTTGGCAAA 58.652 40.909 16.01 16.01 36.56 3.68
375 376 2.992593 TGTAGGCGACATATTTGGCAA 58.007 42.857 0.00 0.00 36.56 4.52
376 377 2.700722 TGTAGGCGACATATTTGGCA 57.299 45.000 0.00 0.00 36.56 4.92
385 386 0.315886 ACGTGTCAATGTAGGCGACA 59.684 50.000 2.11 2.11 43.97 4.35
386 387 0.713883 CACGTGTCAATGTAGGCGAC 59.286 55.000 7.58 0.00 0.00 5.19
387 388 0.389296 CCACGTGTCAATGTAGGCGA 60.389 55.000 15.65 0.00 0.00 5.54
388 389 1.966493 GCCACGTGTCAATGTAGGCG 61.966 60.000 15.65 0.00 33.09 5.52
389 390 1.644786 GGCCACGTGTCAATGTAGGC 61.645 60.000 15.65 7.02 38.10 3.93
390 391 0.036388 AGGCCACGTGTCAATGTAGG 60.036 55.000 15.65 0.00 0.00 3.18
391 392 1.808411 AAGGCCACGTGTCAATGTAG 58.192 50.000 15.65 0.00 0.00 2.74
392 393 2.147958 GAAAGGCCACGTGTCAATGTA 58.852 47.619 15.65 0.00 0.00 2.29
393 394 0.951558 GAAAGGCCACGTGTCAATGT 59.048 50.000 15.65 0.00 0.00 2.71
394 395 0.950836 TGAAAGGCCACGTGTCAATG 59.049 50.000 15.65 0.00 0.00 2.82
395 396 0.951558 GTGAAAGGCCACGTGTCAAT 59.048 50.000 15.65 0.00 0.00 2.57
396 397 0.393132 TGTGAAAGGCCACGTGTCAA 60.393 50.000 15.65 0.21 39.80 3.18
397 398 0.813610 CTGTGAAAGGCCACGTGTCA 60.814 55.000 15.65 8.28 39.80 3.58
398 399 1.941812 CTGTGAAAGGCCACGTGTC 59.058 57.895 15.65 0.00 39.80 3.67
399 400 2.186826 GCTGTGAAAGGCCACGTGT 61.187 57.895 15.65 0.00 39.80 4.49
400 401 2.639286 GCTGTGAAAGGCCACGTG 59.361 61.111 9.08 9.08 39.80 4.49
401 402 2.972505 CGCTGTGAAAGGCCACGT 60.973 61.111 5.01 0.00 39.80 4.49
402 403 3.726517 CCGCTGTGAAAGGCCACG 61.727 66.667 5.01 0.00 39.80 4.94
403 404 4.043200 GCCGCTGTGAAAGGCCAC 62.043 66.667 5.01 0.00 44.80 5.01
406 407 3.793144 CTCGCCGCTGTGAAAGGC 61.793 66.667 0.00 0.00 46.88 4.35
407 408 3.793144 GCTCGCCGCTGTGAAAGG 61.793 66.667 0.00 0.00 35.14 3.11
408 409 3.020026 CTGCTCGCCGCTGTGAAAG 62.020 63.158 0.00 0.00 40.11 2.62
409 410 3.043713 CTGCTCGCCGCTGTGAAA 61.044 61.111 0.00 0.00 40.11 2.69
414 415 1.738099 AGTTTACTGCTCGCCGCTG 60.738 57.895 0.00 2.76 42.62 5.18
415 416 1.738099 CAGTTTACTGCTCGCCGCT 60.738 57.895 0.00 0.00 40.11 5.52
416 417 1.687494 CTCAGTTTACTGCTCGCCGC 61.687 60.000 5.00 0.00 43.46 6.53
417 418 1.687494 GCTCAGTTTACTGCTCGCCG 61.687 60.000 5.00 0.00 43.46 6.46
418 419 1.362406 GGCTCAGTTTACTGCTCGCC 61.362 60.000 16.22 16.22 43.46 5.54
419 420 1.687494 CGGCTCAGTTTACTGCTCGC 61.687 60.000 5.00 7.36 43.46 5.03
420 421 1.078759 CCGGCTCAGTTTACTGCTCG 61.079 60.000 5.00 8.21 43.46 5.03
421 422 1.362406 GCCGGCTCAGTTTACTGCTC 61.362 60.000 22.15 0.00 43.46 4.26
422 423 1.376037 GCCGGCTCAGTTTACTGCT 60.376 57.895 22.15 0.00 43.46 4.24
423 424 2.399356 GGCCGGCTCAGTTTACTGC 61.399 63.158 28.56 0.00 43.46 4.40
424 425 1.745489 GGGCCGGCTCAGTTTACTG 60.745 63.158 28.56 3.47 45.08 2.74
425 426 2.185310 CTGGGCCGGCTCAGTTTACT 62.185 60.000 42.43 0.00 39.58 2.24
426 427 1.745489 CTGGGCCGGCTCAGTTTAC 60.745 63.158 42.43 17.09 39.58 2.01
427 428 2.668632 CTGGGCCGGCTCAGTTTA 59.331 61.111 42.43 16.03 39.58 2.01
433 434 2.893682 ATTAACTGCTGGGCCGGCTC 62.894 60.000 35.51 25.91 36.58 4.70
434 435 1.632018 TATTAACTGCTGGGCCGGCT 61.632 55.000 35.51 19.97 36.58 5.52
435 436 1.153046 TATTAACTGCTGGGCCGGC 60.153 57.895 30.63 30.63 36.10 6.13
436 437 0.180406 ACTATTAACTGCTGGGCCGG 59.820 55.000 8.39 8.39 0.00 6.13
437 438 1.139058 AGACTATTAACTGCTGGGCCG 59.861 52.381 0.00 0.00 0.00 6.13
438 439 2.436173 AGAGACTATTAACTGCTGGGCC 59.564 50.000 0.00 0.00 0.00 5.80
439 440 3.118592 ACAGAGACTATTAACTGCTGGGC 60.119 47.826 0.00 0.00 34.25 5.36
440 441 4.744795 ACAGAGACTATTAACTGCTGGG 57.255 45.455 0.00 0.00 34.25 4.45
441 442 6.269315 CACTACAGAGACTATTAACTGCTGG 58.731 44.000 0.00 0.00 34.25 4.85
442 443 6.127591 ACCACTACAGAGACTATTAACTGCTG 60.128 42.308 0.00 0.00 34.25 4.41
443 444 5.952947 ACCACTACAGAGACTATTAACTGCT 59.047 40.000 0.00 0.00 34.25 4.24
444 445 6.210287 ACCACTACAGAGACTATTAACTGC 57.790 41.667 0.00 0.00 34.25 4.40
445 446 6.487960 CGACCACTACAGAGACTATTAACTG 58.512 44.000 0.00 0.00 36.58 3.16
446 447 5.066246 GCGACCACTACAGAGACTATTAACT 59.934 44.000 0.00 0.00 0.00 2.24
447 448 5.066246 AGCGACCACTACAGAGACTATTAAC 59.934 44.000 0.00 0.00 0.00 2.01
448 449 5.191426 AGCGACCACTACAGAGACTATTAA 58.809 41.667 0.00 0.00 0.00 1.40
449 450 4.778579 AGCGACCACTACAGAGACTATTA 58.221 43.478 0.00 0.00 0.00 0.98
450 451 3.622630 AGCGACCACTACAGAGACTATT 58.377 45.455 0.00 0.00 0.00 1.73
451 452 3.284793 AGCGACCACTACAGAGACTAT 57.715 47.619 0.00 0.00 0.00 2.12
452 453 2.783609 AGCGACCACTACAGAGACTA 57.216 50.000 0.00 0.00 0.00 2.59
453 454 2.783609 TAGCGACCACTACAGAGACT 57.216 50.000 0.00 0.00 0.00 3.24
454 455 2.943690 TCATAGCGACCACTACAGAGAC 59.056 50.000 0.00 0.00 0.00 3.36
455 456 3.277142 TCATAGCGACCACTACAGAGA 57.723 47.619 0.00 0.00 0.00 3.10
456 457 3.793801 GCTTCATAGCGACCACTACAGAG 60.794 52.174 0.00 0.00 37.71 3.35
457 458 2.099263 GCTTCATAGCGACCACTACAGA 59.901 50.000 0.00 0.00 37.71 3.41
458 459 2.464865 GCTTCATAGCGACCACTACAG 58.535 52.381 0.00 0.00 37.71 2.74
459 460 2.579207 GCTTCATAGCGACCACTACA 57.421 50.000 0.00 0.00 37.71 2.74
469 470 7.519366 AGTACAAAACTTCTGGGCTTCATAGC 61.519 42.308 0.00 0.00 40.32 2.97
470 471 5.940470 AGTACAAAACTTCTGGGCTTCATAG 59.060 40.000 0.00 0.00 33.35 2.23
471 472 5.705441 CAGTACAAAACTTCTGGGCTTCATA 59.295 40.000 0.00 0.00 35.76 2.15
472 473 4.520492 CAGTACAAAACTTCTGGGCTTCAT 59.480 41.667 0.00 0.00 35.76 2.57
473 474 3.882888 CAGTACAAAACTTCTGGGCTTCA 59.117 43.478 0.00 0.00 35.76 3.02
474 475 3.253432 CCAGTACAAAACTTCTGGGCTTC 59.747 47.826 0.00 0.00 42.38 3.86
475 476 3.222603 CCAGTACAAAACTTCTGGGCTT 58.777 45.455 0.00 0.00 42.38 4.35
476 477 2.863809 CCAGTACAAAACTTCTGGGCT 58.136 47.619 0.00 0.00 42.38 5.19
480 481 7.444183 TCCTTTATGACCAGTACAAAACTTCTG 59.556 37.037 0.00 0.00 35.76 3.02
481 482 7.514721 TCCTTTATGACCAGTACAAAACTTCT 58.485 34.615 0.00 0.00 35.76 2.85
482 483 7.739498 TCCTTTATGACCAGTACAAAACTTC 57.261 36.000 0.00 0.00 35.76 3.01
483 484 9.449719 CTATCCTTTATGACCAGTACAAAACTT 57.550 33.333 0.00 0.00 35.76 2.66
484 485 8.047310 CCTATCCTTTATGACCAGTACAAAACT 58.953 37.037 0.00 0.00 39.81 2.66
485 486 8.044908 TCCTATCCTTTATGACCAGTACAAAAC 58.955 37.037 0.00 0.00 0.00 2.43
486 487 8.153221 TCCTATCCTTTATGACCAGTACAAAA 57.847 34.615 0.00 0.00 0.00 2.44
487 488 7.743116 TCCTATCCTTTATGACCAGTACAAA 57.257 36.000 0.00 0.00 0.00 2.83
488 489 7.567250 TGATCCTATCCTTTATGACCAGTACAA 59.433 37.037 0.00 0.00 0.00 2.41
489 490 7.073208 TGATCCTATCCTTTATGACCAGTACA 58.927 38.462 0.00 0.00 0.00 2.90
490 491 7.540474 TGATCCTATCCTTTATGACCAGTAC 57.460 40.000 0.00 0.00 0.00 2.73
491 492 7.955750 TGATGATCCTATCCTTTATGACCAGTA 59.044 37.037 0.00 0.00 0.00 2.74
492 493 6.789457 TGATGATCCTATCCTTTATGACCAGT 59.211 38.462 0.00 0.00 0.00 4.00
493 494 7.250032 TGATGATCCTATCCTTTATGACCAG 57.750 40.000 0.00 0.00 0.00 4.00
494 495 7.819521 ATGATGATCCTATCCTTTATGACCA 57.180 36.000 0.00 0.00 0.00 4.02
495 496 8.105829 ACAATGATGATCCTATCCTTTATGACC 58.894 37.037 0.00 0.00 0.00 4.02
498 499 9.948964 TGTACAATGATGATCCTATCCTTTATG 57.051 33.333 0.00 0.00 0.00 1.90
501 502 9.347240 CTTTGTACAATGATGATCCTATCCTTT 57.653 33.333 14.67 0.00 0.00 3.11
502 503 7.941238 CCTTTGTACAATGATGATCCTATCCTT 59.059 37.037 20.00 0.00 0.00 3.36
503 504 7.456725 CCTTTGTACAATGATGATCCTATCCT 58.543 38.462 20.00 0.00 0.00 3.24
504 505 6.656693 CCCTTTGTACAATGATGATCCTATCC 59.343 42.308 20.00 0.00 0.00 2.59
505 506 7.227156 ACCCTTTGTACAATGATGATCCTATC 58.773 38.462 20.00 0.00 0.00 2.08
506 507 7.154191 ACCCTTTGTACAATGATGATCCTAT 57.846 36.000 20.00 0.00 0.00 2.57
507 508 6.575244 ACCCTTTGTACAATGATGATCCTA 57.425 37.500 20.00 0.00 0.00 2.94
508 509 5.456921 ACCCTTTGTACAATGATGATCCT 57.543 39.130 20.00 0.00 0.00 3.24
509 510 6.332630 CAAACCCTTTGTACAATGATGATCC 58.667 40.000 20.00 0.00 35.94 3.36
522 523 8.651859 CATCTAGATGTGTCACAAACCCTTTGT 61.652 40.741 22.42 0.00 42.64 2.83
523 524 5.063204 TCTAGATGTGTCACAAACCCTTTG 58.937 41.667 10.28 3.15 45.95 2.77
524 525 5.304686 TCTAGATGTGTCACAAACCCTTT 57.695 39.130 10.28 0.00 0.00 3.11
525 526 4.974645 TCTAGATGTGTCACAAACCCTT 57.025 40.909 10.28 0.00 0.00 3.95
526 527 4.836825 CATCTAGATGTGTCACAAACCCT 58.163 43.478 22.42 7.61 34.23 4.34
548 549 9.751542 AGCTTAGATGTGACATAACTATGTTAC 57.248 33.333 14.63 14.63 46.20 2.50
549 550 9.750125 CAGCTTAGATGTGACATAACTATGTTA 57.250 33.333 0.00 0.00 46.20 2.41
550 551 8.478066 TCAGCTTAGATGTGACATAACTATGTT 58.522 33.333 0.00 0.00 46.20 2.71
552 553 8.923683 CATCAGCTTAGATGTGACATAACTATG 58.076 37.037 0.00 0.92 40.35 2.23
566 567 4.029520 ACAGAGTGGACATCAGCTTAGAT 58.970 43.478 0.00 0.00 0.00 1.98
567 568 3.435275 ACAGAGTGGACATCAGCTTAGA 58.565 45.455 0.00 0.00 0.00 2.10
568 569 3.883830 ACAGAGTGGACATCAGCTTAG 57.116 47.619 0.00 0.00 0.00 2.18
569 570 4.202357 ACAAACAGAGTGGACATCAGCTTA 60.202 41.667 0.00 0.00 0.00 3.09
570 571 3.144506 CAAACAGAGTGGACATCAGCTT 58.855 45.455 0.00 0.00 0.00 3.74
571 572 2.105477 ACAAACAGAGTGGACATCAGCT 59.895 45.455 0.00 0.00 0.00 4.24
572 573 2.498167 ACAAACAGAGTGGACATCAGC 58.502 47.619 0.00 0.00 0.00 4.26
573 574 4.887748 ACTACAAACAGAGTGGACATCAG 58.112 43.478 0.00 0.00 0.00 2.90
574 575 4.588951 AGACTACAAACAGAGTGGACATCA 59.411 41.667 0.00 0.00 0.00 3.07
575 576 5.140747 AGACTACAAACAGAGTGGACATC 57.859 43.478 0.00 0.00 0.00 3.06
576 577 6.859112 ATAGACTACAAACAGAGTGGACAT 57.141 37.500 0.00 0.00 0.00 3.06
577 578 6.665992 AATAGACTACAAACAGAGTGGACA 57.334 37.500 0.00 0.00 0.00 4.02
578 579 7.964604 AAAATAGACTACAAACAGAGTGGAC 57.035 36.000 0.00 0.00 0.00 4.02
619 620 9.494479 CCACGAATATATAAATGCAGCAATAAG 57.506 33.333 0.00 0.00 0.00 1.73
620 621 8.458052 CCCACGAATATATAAATGCAGCAATAA 58.542 33.333 0.00 0.00 0.00 1.40
621 622 7.826744 TCCCACGAATATATAAATGCAGCAATA 59.173 33.333 0.00 0.00 0.00 1.90
622 623 6.658816 TCCCACGAATATATAAATGCAGCAAT 59.341 34.615 0.00 0.00 0.00 3.56
623 624 6.000840 TCCCACGAATATATAAATGCAGCAA 58.999 36.000 0.00 0.00 0.00 3.91
624 625 5.555966 TCCCACGAATATATAAATGCAGCA 58.444 37.500 0.00 0.00 0.00 4.41
625 626 5.643777 ACTCCCACGAATATATAAATGCAGC 59.356 40.000 0.00 0.00 0.00 5.25
626 627 7.672983 AACTCCCACGAATATATAAATGCAG 57.327 36.000 0.00 0.00 0.00 4.41
627 628 9.214957 CTAAACTCCCACGAATATATAAATGCA 57.785 33.333 0.00 0.00 0.00 3.96
628 629 9.431887 TCTAAACTCCCACGAATATATAAATGC 57.568 33.333 0.00 0.00 0.00 3.56
635 636 9.304335 TGTCATATCTAAACTCCCACGAATATA 57.696 33.333 0.00 0.00 0.00 0.86
636 637 8.190326 TGTCATATCTAAACTCCCACGAATAT 57.810 34.615 0.00 0.00 0.00 1.28
637 638 7.591421 TGTCATATCTAAACTCCCACGAATA 57.409 36.000 0.00 0.00 0.00 1.75
638 639 6.479972 TGTCATATCTAAACTCCCACGAAT 57.520 37.500 0.00 0.00 0.00 3.34
639 640 5.925506 TGTCATATCTAAACTCCCACGAA 57.074 39.130 0.00 0.00 0.00 3.85
640 641 5.010719 GGATGTCATATCTAAACTCCCACGA 59.989 44.000 0.00 0.00 0.00 4.35
641 642 5.011125 AGGATGTCATATCTAAACTCCCACG 59.989 44.000 0.00 0.00 0.00 4.94
642 643 6.426646 AGGATGTCATATCTAAACTCCCAC 57.573 41.667 0.00 0.00 0.00 4.61
643 644 8.561536 TTAAGGATGTCATATCTAAACTCCCA 57.438 34.615 0.00 0.00 0.00 4.37
644 645 9.847224 TTTTAAGGATGTCATATCTAAACTCCC 57.153 33.333 0.00 0.00 0.00 4.30
673 674 7.492669 ACGGTTTGTCTAATTCACATCTAGATG 59.507 37.037 27.63 27.63 44.15 2.90
674 675 7.556844 ACGGTTTGTCTAATTCACATCTAGAT 58.443 34.615 0.00 0.00 0.00 1.98
675 676 6.931838 ACGGTTTGTCTAATTCACATCTAGA 58.068 36.000 0.00 0.00 0.00 2.43
676 677 7.223058 GACGGTTTGTCTAATTCACATCTAG 57.777 40.000 0.00 0.00 44.58 2.43
691 692 2.748532 TCGGTTTTGAAAGACGGTTTGT 59.251 40.909 4.08 0.00 0.00 2.83
692 693 3.103007 GTCGGTTTTGAAAGACGGTTTG 58.897 45.455 4.08 0.00 0.00 2.93
693 694 3.011818 AGTCGGTTTTGAAAGACGGTTT 58.988 40.909 4.08 0.00 38.53 3.27
694 695 2.353579 CAGTCGGTTTTGAAAGACGGTT 59.646 45.455 4.08 0.00 38.53 4.44
695 696 1.937899 CAGTCGGTTTTGAAAGACGGT 59.062 47.619 4.08 0.00 38.53 4.83
696 697 1.937899 ACAGTCGGTTTTGAAAGACGG 59.062 47.619 4.08 0.41 38.53 4.79
697 698 4.782252 TTACAGTCGGTTTTGAAAGACG 57.218 40.909 0.00 0.00 38.53 4.18
698 699 6.202188 TCAGATTACAGTCGGTTTTGAAAGAC 59.798 38.462 0.00 0.00 0.00 3.01
699 700 6.202188 GTCAGATTACAGTCGGTTTTGAAAGA 59.798 38.462 0.00 0.00 0.00 2.52
700 701 6.202954 AGTCAGATTACAGTCGGTTTTGAAAG 59.797 38.462 0.00 0.00 0.00 2.62
701 702 6.018262 CAGTCAGATTACAGTCGGTTTTGAAA 60.018 38.462 0.00 0.00 0.00 2.69
702 703 5.465390 CAGTCAGATTACAGTCGGTTTTGAA 59.535 40.000 0.00 0.00 0.00 2.69
703 704 4.988540 CAGTCAGATTACAGTCGGTTTTGA 59.011 41.667 0.00 0.00 0.00 2.69
704 705 4.988540 TCAGTCAGATTACAGTCGGTTTTG 59.011 41.667 0.00 0.00 0.00 2.44
705 706 5.209818 TCAGTCAGATTACAGTCGGTTTT 57.790 39.130 0.00 0.00 0.00 2.43
716 717 5.244785 ACGCGAGTAATTCAGTCAGATTA 57.755 39.130 15.93 0.00 46.88 1.75
729 730 4.452114 TCTGTAAGACTGTAACGCGAGTAA 59.548 41.667 15.93 0.00 41.29 2.24
744 745 7.017498 TGCGTTTGTTGTAAATTCTGTAAGA 57.983 32.000 0.00 0.00 44.68 2.10
847 867 4.833390 AGGCGACAAAGTTTATAAGCTCT 58.167 39.130 1.99 0.00 0.00 4.09
904 924 2.520968 GAAAGGTGGTGGTGGCCT 59.479 61.111 3.32 0.00 0.00 5.19
905 925 2.600470 GGAAAGGTGGTGGTGGCC 60.600 66.667 0.00 0.00 0.00 5.36
906 926 1.603739 GAGGAAAGGTGGTGGTGGC 60.604 63.158 0.00 0.00 0.00 5.01
1041 1072 3.959991 GAAGTCGTCCTGCCCCTGC 62.960 68.421 0.00 0.00 38.26 4.85
1042 1073 1.831652 AAGAAGTCGTCCTGCCCCTG 61.832 60.000 0.00 0.00 0.00 4.45
1043 1074 1.536662 AAGAAGTCGTCCTGCCCCT 60.537 57.895 0.00 0.00 0.00 4.79
1044 1075 1.079057 GAAGAAGTCGTCCTGCCCC 60.079 63.158 0.00 0.00 0.00 5.80
1045 1076 1.446272 CGAAGAAGTCGTCCTGCCC 60.446 63.158 0.00 0.00 45.09 5.36
1341 1384 2.664851 TCGAACAGCGCCTGGTTG 60.665 61.111 13.50 9.56 40.61 3.77
1395 1438 4.680237 CCGAACGGTGGCTGAGCA 62.680 66.667 6.82 0.00 0.00 4.26
1404 1447 4.003788 CTCACCTGCCCGAACGGT 62.004 66.667 12.23 0.00 0.00 4.83
1512 1556 2.425592 CGGCATTGATCCGGCCTA 59.574 61.111 14.93 0.00 45.53 3.93
1743 1788 0.109272 GCGAGAATGTGACAGGTCGA 60.109 55.000 15.42 0.00 0.00 4.20
1802 1847 7.036996 TGCAGTGAAATTGTGAAGATTGTTA 57.963 32.000 0.00 0.00 0.00 2.41
1819 1864 5.047164 ACATTTGAGCCAATAATTGCAGTGA 60.047 36.000 0.00 0.00 0.00 3.41
1823 1868 4.936411 CCAACATTTGAGCCAATAATTGCA 59.064 37.500 0.00 0.00 0.00 4.08
1824 1869 4.201841 GCCAACATTTGAGCCAATAATTGC 60.202 41.667 0.00 0.00 0.00 3.56
1831 1876 0.392336 GGTGCCAACATTTGAGCCAA 59.608 50.000 0.00 0.00 0.00 4.52
1836 1881 0.675083 CTGCTGGTGCCAACATTTGA 59.325 50.000 0.00 0.00 38.71 2.69
1837 1882 0.947180 GCTGCTGGTGCCAACATTTG 60.947 55.000 0.00 0.00 38.71 2.32
1911 1967 3.123620 CCCTTCTGAGCTGCACGC 61.124 66.667 1.02 0.47 39.57 5.34
1912 1968 1.447489 CTCCCTTCTGAGCTGCACG 60.447 63.158 1.02 0.00 0.00 5.34
1913 1969 0.108233 CTCTCCCTTCTGAGCTGCAC 60.108 60.000 1.02 0.00 32.22 4.57
2069 2125 2.757314 CAGAATTCAGGGAAGGAAAGCC 59.243 50.000 8.44 0.00 0.00 4.35
2106 2163 3.679502 GCAACCAATAATGCAGGAAACAC 59.320 43.478 0.00 0.00 42.12 3.32
2270 2337 5.248705 CCCTATCCCCTGGATTACTTAAGTC 59.751 48.000 12.39 0.00 39.79 3.01
2359 2429 3.596214 TGCTGCCTGCTTAACTACTTAC 58.404 45.455 0.00 0.00 43.37 2.34
2362 2432 1.677217 GCTGCTGCCTGCTTAACTACT 60.677 52.381 3.85 0.00 43.37 2.57
2368 2439 2.045634 CCTGCTGCTGCCTGCTTA 60.046 61.111 13.47 0.00 43.37 3.09
2396 2467 0.962356 CCCTTGGCACCATGTCTGAC 60.962 60.000 0.00 0.00 0.00 3.51
2488 2559 3.984018 ATTTGGTGTCGTCGTTTATCG 57.016 42.857 0.00 0.00 41.41 2.92
2497 2568 0.251165 CCCCCTCAATTTGGTGTCGT 60.251 55.000 0.00 0.00 0.00 4.34
2524 2595 4.889409 TGATCATGAAGCCCCTGATTTAAC 59.111 41.667 0.00 0.00 30.00 2.01
2531 2602 3.067742 GTGAAATGATCATGAAGCCCCTG 59.932 47.826 9.46 0.00 40.97 4.45
2554 2626 4.086706 AGTTCCAGGAACCTAGTGTTTG 57.913 45.455 26.34 0.00 42.85 2.93
2570 2642 7.094890 CCTCATGATGCTCAATATTGTAGTTCC 60.095 40.741 14.97 3.21 0.00 3.62
2669 2748 2.000447 GTTCTGTAACCATCACGGAGC 59.000 52.381 0.00 0.00 38.63 4.70
2691 2770 0.036577 CCCTGTCTGTCTGGCTCTTG 60.037 60.000 0.00 0.00 34.39 3.02
2692 2771 1.197430 CCCCTGTCTGTCTGGCTCTT 61.197 60.000 0.00 0.00 34.39 2.85
2693 2772 1.611851 CCCCTGTCTGTCTGGCTCT 60.612 63.158 0.00 0.00 34.39 4.09
2694 2773 2.985456 CCCCTGTCTGTCTGGCTC 59.015 66.667 0.00 0.00 34.39 4.70
2695 2774 3.325753 GCCCCTGTCTGTCTGGCT 61.326 66.667 0.00 0.00 39.05 4.75
2696 2775 4.767255 CGCCCCTGTCTGTCTGGC 62.767 72.222 0.00 0.00 38.74 4.85
2697 2776 2.883828 AACGCCCCTGTCTGTCTGG 61.884 63.158 0.00 0.00 35.32 3.86
2698 2777 1.669115 CAACGCCCCTGTCTGTCTG 60.669 63.158 0.00 0.00 0.00 3.51
2699 2778 2.100879 GACAACGCCCCTGTCTGTCT 62.101 60.000 0.00 0.00 40.10 3.41
2700 2779 1.668151 GACAACGCCCCTGTCTGTC 60.668 63.158 0.00 0.00 40.10 3.51
2701 2780 2.426023 GACAACGCCCCTGTCTGT 59.574 61.111 0.00 0.00 40.10 3.41
2704 2783 0.389948 CACTAGACAACGCCCCTGTC 60.390 60.000 0.00 0.34 42.95 3.51
2705 2784 1.671742 CACTAGACAACGCCCCTGT 59.328 57.895 0.00 0.00 0.00 4.00
2712 2791 0.244994 AGCTGGAGCACTAGACAACG 59.755 55.000 0.00 0.00 45.16 4.10
2800 2879 4.496673 GCTCTAGATACCGTGAACAGTGAG 60.497 50.000 0.00 0.00 0.00 3.51
2840 2919 4.084066 GGTTTTATTCCAAAAAGCCAAGCG 60.084 41.667 0.95 0.00 39.68 4.68
2986 3066 7.267857 ACTTGACATAATCAATGATCTCGTCA 58.732 34.615 13.85 13.85 46.37 4.35
3059 3139 2.780010 ACTAGCTAGTAGTAACCCGGGA 59.220 50.000 32.02 1.07 40.47 5.14
3240 3320 6.660521 AGCTTGTCAAAATGGAAGATCATGTA 59.339 34.615 0.00 0.00 0.00 2.29
3289 3369 4.106197 GTCGTTGTCAGTGATGTAGGATC 58.894 47.826 0.00 0.00 0.00 3.36
3421 3501 7.352739 GTCAAAAGGCTAACATTCCATATACG 58.647 38.462 0.00 0.00 0.00 3.06
3651 3735 2.688507 TGCAGTAGCTCTTTACAGTGC 58.311 47.619 5.01 5.01 42.74 4.40
3655 3739 7.979444 AATTTAGTTGCAGTAGCTCTTTACA 57.021 32.000 0.00 0.00 42.74 2.41
3731 3818 6.808008 TGCTTGATCTGTTCCTTAAGAAAG 57.192 37.500 3.36 0.00 35.85 2.62
3734 3821 7.550551 CACTAATGCTTGATCTGTTCCTTAAGA 59.449 37.037 3.36 0.00 0.00 2.10
3965 4053 5.969423 AGAGTTAATCGGGTATTTTGTCGA 58.031 37.500 0.00 0.00 36.07 4.20
3966 4054 6.040878 AGAGAGTTAATCGGGTATTTTGTCG 58.959 40.000 0.00 0.00 0.00 4.35
3967 4055 7.845066 AAGAGAGTTAATCGGGTATTTTGTC 57.155 36.000 0.00 0.00 0.00 3.18
3969 4057 8.040716 ACAAAGAGAGTTAATCGGGTATTTTG 57.959 34.615 0.00 0.00 0.00 2.44
4027 4115 2.490509 CAGTGGCAATTGAGCAGATGAA 59.509 45.455 10.34 0.00 35.83 2.57
4053 4141 2.746362 CTGCAAGGTGGACTCAGATTTC 59.254 50.000 0.00 0.00 0.00 2.17
4257 4345 1.519455 GGTTGCGGAGGAGATGACG 60.519 63.158 0.00 0.00 0.00 4.35
4326 4414 1.509923 GCTACCGCCTTCGTGTAGT 59.490 57.895 11.74 0.00 39.46 2.73
4456 4544 3.565902 CCCAGAACTCAAACCTTCTGAAC 59.434 47.826 8.63 0.00 44.22 3.18
4468 4556 2.026262 GCAATTCTACCCCCAGAACTCA 60.026 50.000 0.00 0.00 37.37 3.41
4471 4559 1.005450 TGGCAATTCTACCCCCAGAAC 59.995 52.381 0.00 0.00 37.37 3.01
4648 4740 1.663695 AGAGACTAGAGCAGCTCGAC 58.336 55.000 16.99 9.45 35.36 4.20
4696 4788 0.318762 ACAAGAGGAACGACAGCTCC 59.681 55.000 0.00 0.00 32.85 4.70
4794 4924 7.652524 TTGCATTTGTGCCTCCTATAAAATA 57.347 32.000 0.00 0.00 0.00 1.40
4795 4925 6.543430 TTGCATTTGTGCCTCCTATAAAAT 57.457 33.333 0.00 0.00 0.00 1.82
4800 4930 2.167075 GCTTTGCATTTGTGCCTCCTAT 59.833 45.455 0.00 0.00 0.00 2.57
4804 4935 1.425412 CAGCTTTGCATTTGTGCCTC 58.575 50.000 0.00 0.00 0.00 4.70
4943 5075 3.535561 CTTGTTACCACCTGCATCCTAG 58.464 50.000 0.00 0.00 0.00 3.02
4973 5145 0.888619 TTGACGCTCTGAGGATCGTT 59.111 50.000 6.83 0.00 43.03 3.85
5007 5179 3.061403 CGGATCACGTAATTTACACGCTC 60.061 47.826 7.31 0.00 43.10 5.03
5011 5183 3.861113 TCAGCGGATCACGTAATTTACAC 59.139 43.478 7.31 0.00 46.52 2.90
5012 5184 4.112716 TCAGCGGATCACGTAATTTACA 57.887 40.909 7.31 0.00 46.52 2.41
5015 5200 3.857052 TCTTCAGCGGATCACGTAATTT 58.143 40.909 0.00 0.00 46.52 1.82
5036 5221 7.987458 CACGGTCAAAGATGCCCTAATATATAT 59.013 37.037 0.00 0.00 0.00 0.86
5037 5222 7.327975 CACGGTCAAAGATGCCCTAATATATA 58.672 38.462 0.00 0.00 0.00 0.86
5038 5223 6.173339 CACGGTCAAAGATGCCCTAATATAT 58.827 40.000 0.00 0.00 0.00 0.86
5039 5224 5.547465 CACGGTCAAAGATGCCCTAATATA 58.453 41.667 0.00 0.00 0.00 0.86
5055 5240 2.039818 TTGGTTAACAAGCACGGTCA 57.960 45.000 8.10 0.00 38.84 4.02
5056 5241 3.423996 TTTTGGTTAACAAGCACGGTC 57.576 42.857 8.10 0.00 40.82 4.79
5079 5264 4.808414 TCAGAGTTGTCACTGGGATTAG 57.192 45.455 0.00 0.00 34.04 1.73
5080 5265 4.777366 TCATCAGAGTTGTCACTGGGATTA 59.223 41.667 0.00 0.00 34.04 1.75
5084 5270 3.070018 GTTCATCAGAGTTGTCACTGGG 58.930 50.000 0.00 0.00 34.04 4.45
5088 5274 4.380531 TCCTTGTTCATCAGAGTTGTCAC 58.619 43.478 0.00 0.00 0.00 3.67
5121 5307 4.278170 CCCTTGTTCAAATGCTACAAGTCA 59.722 41.667 18.39 0.00 44.46 3.41
5191 5396 6.455360 ACCTGAAAATTATAGGTGCATGTG 57.545 37.500 7.24 0.00 42.95 3.21
5194 5399 7.069455 GGGTAAACCTGAAAATTATAGGTGCAT 59.931 37.037 8.47 3.12 43.75 3.96
5203 5408 8.024145 ACATTTGTGGGTAAACCTGAAAATTA 57.976 30.769 0.00 0.00 41.11 1.40
5241 5446 1.342076 TGTGGTTTAGTGGGTTTGGCA 60.342 47.619 0.00 0.00 0.00 4.92
5264 5469 0.530650 AGCGCGATTTGACGATGGAT 60.531 50.000 12.10 0.00 35.09 3.41
5271 5476 1.225475 CGACACAGCGCGATTTGAC 60.225 57.895 18.37 10.31 0.00 3.18
5283 5488 2.756760 GTTACCCCTACTGATCGACACA 59.243 50.000 0.00 0.00 0.00 3.72
5288 5493 3.552875 TCTCTGTTACCCCTACTGATCG 58.447 50.000 0.00 0.00 0.00 3.69
5309 5514 7.013655 CCCTGTTTGCTTTTCTATATGTAGCAT 59.986 37.037 0.00 0.00 41.06 3.79
5311 5516 6.238759 CCCCTGTTTGCTTTTCTATATGTAGC 60.239 42.308 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.