Multiple sequence alignment - TraesCS6D01G337600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G337600 chr6D 100.000 3577 0 0 1 3577 437956948 437960524 0.000000e+00 6606.0
1 TraesCS6D01G337600 chr6D 77.052 1011 180 37 1549 2539 438341394 438342372 5.260000e-148 534.0
2 TraesCS6D01G337600 chr6D 80.876 251 42 6 3324 3571 394932757 394933004 3.640000e-45 193.0
3 TraesCS6D01G337600 chr6A 90.074 2176 139 32 1 2123 586329287 586331438 0.000000e+00 2750.0
4 TraesCS6D01G337600 chr6A 88.424 717 44 5 2117 2794 586333299 586334015 0.000000e+00 828.0
5 TraesCS6D01G337600 chr6A 75.929 1076 205 37 1547 2604 587556234 587555195 1.480000e-138 503.0
6 TraesCS6D01G337600 chr6A 77.023 927 165 35 1629 2539 586852141 586853035 4.150000e-134 488.0
7 TraesCS6D01G337600 chr6A 90.686 204 9 1 2873 3066 586334011 586334214 2.740000e-66 263.0
8 TraesCS6D01G337600 chr6A 96.703 91 3 0 2788 2878 596516277 596516367 6.190000e-33 152.0
9 TraesCS6D01G337600 chr6A 74.324 296 48 16 3292 3572 616863995 616863713 2.270000e-17 100.0
10 TraesCS6D01G337600 chr6B 86.406 2273 180 32 623 2794 663021968 663024212 0.000000e+00 2366.0
11 TraesCS6D01G337600 chr6B 92.743 1378 62 9 1 1361 662899112 662900468 0.000000e+00 1956.0
12 TraesCS6D01G337600 chr6B 90.079 1139 98 7 1504 2636 663174587 663175716 0.000000e+00 1463.0
13 TraesCS6D01G337600 chr6B 89.719 1138 104 5 1504 2636 662946225 662947354 0.000000e+00 1441.0
14 TraesCS6D01G337600 chr6B 85.097 1436 147 15 1412 2794 662905989 662907410 0.000000e+00 1404.0
15 TraesCS6D01G337600 chr6B 87.602 1226 132 8 1412 2631 663162089 663163300 0.000000e+00 1404.0
16 TraesCS6D01G337600 chr6B 83.569 1132 128 27 962 2058 662982392 662983500 0.000000e+00 1007.0
17 TraesCS6D01G337600 chr6B 83.569 1132 128 27 962 2058 663008493 663009601 0.000000e+00 1007.0
18 TraesCS6D01G337600 chr6B 90.995 211 9 1 2873 3073 663024208 663024418 3.520000e-70 276.0
19 TraesCS6D01G337600 chr6B 89.100 211 13 1 2873 3073 663175918 663176128 1.650000e-63 254.0
20 TraesCS6D01G337600 chr6B 89.756 205 10 2 2873 3066 662907406 662907610 5.930000e-63 252.0
21 TraesCS6D01G337600 chr6B 89.268 205 11 2 2873 3066 663163508 663163712 2.760000e-61 246.0
22 TraesCS6D01G337600 chr6B 88.152 211 15 2 2873 3073 662947556 662947766 3.570000e-60 243.0
23 TraesCS6D01G337600 chr5B 83.854 192 26 5 3387 3574 8011779 8011589 1.020000e-40 178.0
24 TraesCS6D01G337600 chr5B 89.706 68 6 1 3290 3357 620004183 620004117 6.360000e-13 86.1
25 TraesCS6D01G337600 chr2B 89.116 147 11 3 3436 3577 36312327 36312473 1.020000e-40 178.0
26 TraesCS6D01G337600 chr2B 77.323 269 52 6 3307 3566 447866531 447866799 2.220000e-32 150.0
27 TraesCS6D01G337600 chr2B 80.882 136 16 3 3292 3417 694047222 694047357 8.170000e-17 99.0
28 TraesCS6D01G337600 chr7A 90.370 135 8 4 3436 3565 80756476 80756610 4.750000e-39 172.0
29 TraesCS6D01G337600 chr3D 80.882 204 34 5 3373 3571 157472549 157472346 4.780000e-34 156.0
30 TraesCS6D01G337600 chr7B 77.509 289 43 10 3308 3577 656417716 656417431 1.720000e-33 154.0
31 TraesCS6D01G337600 chr7B 89.855 69 6 1 3292 3359 638078593 638078525 1.770000e-13 87.9
32 TraesCS6D01G337600 chr5A 95.745 94 4 0 2783 2876 38143946 38144039 6.190000e-33 152.0
33 TraesCS6D01G337600 chr5A 92.308 65 4 1 3293 3357 591485077 591485140 1.370000e-14 91.6
34 TraesCS6D01G337600 chr1D 96.703 91 3 0 2789 2879 356580327 356580417 6.190000e-33 152.0
35 TraesCS6D01G337600 chr1D 95.455 88 4 0 2791 2878 479227734 479227821 1.340000e-29 141.0
36 TraesCS6D01G337600 chr1A 96.703 91 3 0 2789 2879 522559480 522559390 6.190000e-33 152.0
37 TraesCS6D01G337600 chr4D 80.193 207 35 5 3372 3577 12969531 12969330 2.220000e-32 150.0
38 TraesCS6D01G337600 chr4D 81.443 194 27 8 3387 3572 431514299 431514107 2.220000e-32 150.0
39 TraesCS6D01G337600 chr3B 95.699 93 4 0 2783 2875 283376099 283376007 2.220000e-32 150.0
40 TraesCS6D01G337600 chr2A 94.792 96 5 0 2783 2878 207651871 207651966 2.220000e-32 150.0
41 TraesCS6D01G337600 chr2A 90.141 71 6 1 3291 3360 513825257 513825187 1.370000e-14 91.6
42 TraesCS6D01G337600 chr4A 93.878 98 4 2 2786 2883 418604440 418604535 2.880000e-31 147.0
43 TraesCS6D01G337600 chr4B 93.000 100 6 1 2786 2885 317037417 317037319 1.040000e-30 145.0
44 TraesCS6D01G337600 chr2D 90.000 70 6 1 3292 3360 622020672 622020603 4.920000e-14 89.8
45 TraesCS6D01G337600 chr2D 93.220 59 4 0 3301 3359 127992128 127992070 1.770000e-13 87.9
46 TraesCS6D01G337600 chr3A 89.855 69 6 1 3292 3360 13742402 13742469 1.770000e-13 87.9
47 TraesCS6D01G337600 chrUn 78.261 138 24 4 1877 2014 325899918 325900049 2.290000e-12 84.2
48 TraesCS6D01G337600 chr7D 100.000 28 0 0 3400 3427 530753433 530753460 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G337600 chr6D 437956948 437960524 3576 False 6606.000000 6606 100.0000 1 3577 1 chr6D.!!$F2 3576
1 TraesCS6D01G337600 chr6D 438341394 438342372 978 False 534.000000 534 77.0520 1549 2539 1 chr6D.!!$F3 990
2 TraesCS6D01G337600 chr6A 586329287 586334214 4927 False 1280.333333 2750 89.7280 1 3066 3 chr6A.!!$F3 3065
3 TraesCS6D01G337600 chr6A 587555195 587556234 1039 True 503.000000 503 75.9290 1547 2604 1 chr6A.!!$R1 1057
4 TraesCS6D01G337600 chr6A 586852141 586853035 894 False 488.000000 488 77.0230 1629 2539 1 chr6A.!!$F1 910
5 TraesCS6D01G337600 chr6B 662899112 662900468 1356 False 1956.000000 1956 92.7430 1 1361 1 chr6B.!!$F1 1360
6 TraesCS6D01G337600 chr6B 663021968 663024418 2450 False 1321.000000 2366 88.7005 623 3073 2 chr6B.!!$F6 2450
7 TraesCS6D01G337600 chr6B 662982392 662983500 1108 False 1007.000000 1007 83.5690 962 2058 1 chr6B.!!$F2 1096
8 TraesCS6D01G337600 chr6B 663008493 663009601 1108 False 1007.000000 1007 83.5690 962 2058 1 chr6B.!!$F3 1096
9 TraesCS6D01G337600 chr6B 663174587 663176128 1541 False 858.500000 1463 89.5895 1504 3073 2 chr6B.!!$F8 1569
10 TraesCS6D01G337600 chr6B 662946225 662947766 1541 False 842.000000 1441 88.9355 1504 3073 2 chr6B.!!$F5 1569
11 TraesCS6D01G337600 chr6B 662905989 662907610 1621 False 828.000000 1404 87.4265 1412 3066 2 chr6B.!!$F4 1654
12 TraesCS6D01G337600 chr6B 663162089 663163712 1623 False 825.000000 1404 88.4350 1412 3066 2 chr6B.!!$F7 1654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 891 1.010797 CTTGGATCAAATCGCGCCG 60.011 57.895 0.0 0.0 0.0 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2631 4611 0.030638 GCAGCGCTCCTTCAACAAAA 59.969 50.0 7.13 0.0 0.0 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
462 473 1.315690 CTGCTGATAATGTGGGCCTG 58.684 55.000 4.53 0.00 0.00 4.85
669 690 3.154473 CCAGGAATCTCCCGCCGA 61.154 66.667 0.00 0.00 37.19 5.54
685 706 1.949631 CGACGGCGAAATCCCTAGC 60.950 63.158 16.62 0.00 40.82 3.42
764 794 1.376553 GAGAGCTGACCAAGGTGGC 60.377 63.158 0.00 0.93 42.67 5.01
835 874 3.307762 CGGATTTCTCCAAGGGTTTCTCT 60.308 47.826 0.00 0.00 42.19 3.10
852 891 1.010797 CTTGGATCAAATCGCGCCG 60.011 57.895 0.00 0.00 0.00 6.46
896 935 6.041865 TCTGAGAAGAAGATTCAGGATCATCC 59.958 42.308 0.00 0.00 39.01 3.51
1003 1042 1.520342 GAGGCAGAGTCGGTGATGC 60.520 63.158 0.00 0.00 37.95 3.91
1021 1060 1.586154 GCTCATGGGTTTGGACACCG 61.586 60.000 0.00 0.00 37.76 4.94
1130 1172 3.812053 GACGATGAAAAGGATGAGATGGG 59.188 47.826 0.00 0.00 0.00 4.00
1164 1206 1.389106 GACGCGTATTGGACTGTGAAC 59.611 52.381 13.97 0.00 0.00 3.18
1271 1313 4.530161 ACTATTGGCTAAGGAGATGGCTAG 59.470 45.833 2.05 0.00 0.00 3.42
1407 1492 4.448210 GTCGCCCCTTGTATAAATGAAGA 58.552 43.478 0.00 0.00 0.00 2.87
1408 1493 5.063880 GTCGCCCCTTGTATAAATGAAGAT 58.936 41.667 0.00 0.00 0.00 2.40
1418 1503 9.277783 CTTGTATAAATGAAGATAGGGGTTCTG 57.722 37.037 0.00 0.00 0.00 3.02
1419 1504 8.561536 TGTATAAATGAAGATAGGGGTTCTGA 57.438 34.615 0.00 0.00 0.00 3.27
1427 1512 5.638530 AGATAGGGGTTCTGATTTTCCTC 57.361 43.478 0.00 0.00 0.00 3.71
1433 1518 3.190744 GGGTTCTGATTTTCCTCGAAACC 59.809 47.826 0.68 0.68 34.67 3.27
1435 1520 4.459337 GGTTCTGATTTTCCTCGAAACCAT 59.541 41.667 3.98 0.00 34.71 3.55
1447 1532 1.546773 CGAAACCATGGAAAGGGGTCA 60.547 52.381 21.47 0.00 32.67 4.02
1484 1569 4.160252 TCTGTGCATGTGCTTATCTAGTGA 59.840 41.667 6.55 0.00 42.66 3.41
1486 1571 6.040842 TCTGTGCATGTGCTTATCTAGTGATA 59.959 38.462 6.55 0.00 42.66 2.15
1492 1577 7.439356 GCATGTGCTTATCTAGTGATAGTTCAA 59.561 37.037 0.00 0.00 36.62 2.69
1498 1583 7.655328 GCTTATCTAGTGATAGTTCAAGCATGT 59.345 37.037 0.00 0.00 38.32 3.21
1499 1584 9.539825 CTTATCTAGTGATAGTTCAAGCATGTT 57.460 33.333 0.00 0.00 36.62 2.71
1500 1585 9.890629 TTATCTAGTGATAGTTCAAGCATGTTT 57.109 29.630 0.00 0.00 36.62 2.83
1502 1587 9.890629 ATCTAGTGATAGTTCAAGCATGTTTAA 57.109 29.630 0.00 0.00 32.48 1.52
1540 1629 3.691049 AACACACGATTCACTTTGGTG 57.309 42.857 0.00 0.00 44.23 4.17
1588 1677 1.005294 AGTTTACGCACTACACGCCG 61.005 55.000 0.00 0.00 0.00 6.46
1594 1683 2.340809 CACTACACGCCGGGACAA 59.659 61.111 2.18 0.00 0.00 3.18
1596 1685 0.881159 CACTACACGCCGGGACAAAA 60.881 55.000 2.18 0.00 0.00 2.44
1597 1686 0.179051 ACTACACGCCGGGACAAAAA 60.179 50.000 2.18 0.00 0.00 1.94
1598 1687 0.236449 CTACACGCCGGGACAAAAAC 59.764 55.000 2.18 0.00 0.00 2.43
1614 1711 1.166531 AAACTCAACAGCGGTCCTGC 61.167 55.000 0.00 0.00 45.78 4.85
1655 1752 3.431905 GCAGATCTTCTCCATCAAGCTCA 60.432 47.826 0.00 0.00 0.00 4.26
1669 1766 4.248859 TCAAGCTCACAGAAATAGCTGTC 58.751 43.478 0.00 0.00 45.54 3.51
1845 1946 1.537202 GACCTTGATTGCACACCTGTC 59.463 52.381 0.00 0.00 0.00 3.51
1850 1951 0.251341 GATTGCACACCTGTCCCCTT 60.251 55.000 0.00 0.00 0.00 3.95
1852 1953 0.754957 TTGCACACCTGTCCCCTTTG 60.755 55.000 0.00 0.00 0.00 2.77
1870 1971 6.382570 CCCCTTTGTTGTTGATTAATGGGATA 59.617 38.462 0.00 0.00 38.90 2.59
1874 1975 9.703892 CTTTGTTGTTGATTAATGGGATAACAA 57.296 29.630 0.00 3.47 36.16 2.83
1904 2005 1.679139 TGCAGGATAGGATTTTGCGG 58.321 50.000 0.00 0.00 37.58 5.69
1919 2020 2.189257 CGGTTGATCGGCCCATCA 59.811 61.111 9.21 9.21 0.00 3.07
1987 2088 8.084590 CTGAAAGTAAAAGGTACAGGTACAAG 57.915 38.462 11.35 0.00 37.78 3.16
1988 2089 7.567458 TGAAAGTAAAAGGTACAGGTACAAGT 58.433 34.615 11.35 0.00 37.78 3.16
2042 2143 2.032675 GGACTGTTACGACGGAGGATAC 59.967 54.545 0.00 0.00 36.01 2.24
2046 2147 1.876156 GTTACGACGGAGGATACGGAT 59.124 52.381 0.00 0.00 46.39 4.18
2111 2212 2.032178 GGAGTTTTGTGTGCAGACAGTC 59.968 50.000 16.91 11.84 30.74 3.51
2165 4133 3.074390 TCCAGGTTGTCAAAGATGATGGT 59.926 43.478 0.00 0.00 38.01 3.55
2189 4157 1.202952 TGGCCTTTTGAATACGGTGGT 60.203 47.619 3.32 0.00 0.00 4.16
2260 4231 3.181486 GGAGTCACTCACGCTATCAATCA 60.181 47.826 7.24 0.00 31.08 2.57
2313 4288 1.760192 AGATGGAGCATGGCTGAAAC 58.240 50.000 0.00 0.00 39.88 2.78
2317 4292 0.244721 GGAGCATGGCTGAAACAACC 59.755 55.000 0.00 0.00 39.88 3.77
2546 4526 0.822164 CTACGGACAAGGGGACGATT 59.178 55.000 0.00 0.00 0.00 3.34
2550 4530 0.608035 GGACAAGGGGACGATTGCAA 60.608 55.000 0.00 0.00 0.00 4.08
2567 4547 3.791245 TGCAACACAGGGAAATTTGTTC 58.209 40.909 0.00 0.00 29.65 3.18
2580 4560 5.108027 GGAAATTTGTTCGAATGTTGAACCG 60.108 40.000 0.00 0.00 43.95 4.44
2671 4688 2.542766 ATACAGCCGATTTTTGCACG 57.457 45.000 0.00 0.00 0.00 5.34
2733 4750 2.280457 GGCGGCTGGATCTAGCAC 60.280 66.667 29.39 20.85 45.46 4.40
2768 4798 1.071605 CTGCTCAGTAGTTCCGTTGC 58.928 55.000 0.00 0.00 0.00 4.17
2787 4817 4.672587 TGCTGAAGTGTCTCAGTAGTTT 57.327 40.909 2.81 0.00 44.04 2.66
2789 4819 4.811024 TGCTGAAGTGTCTCAGTAGTTTTG 59.189 41.667 2.81 0.00 44.04 2.44
2790 4820 4.811557 GCTGAAGTGTCTCAGTAGTTTTGT 59.188 41.667 2.81 0.00 44.04 2.83
2791 4821 5.983720 GCTGAAGTGTCTCAGTAGTTTTGTA 59.016 40.000 2.81 0.00 44.04 2.41
2792 4822 6.074249 GCTGAAGTGTCTCAGTAGTTTTGTAC 60.074 42.308 2.81 0.00 44.04 2.90
2793 4823 7.108841 TGAAGTGTCTCAGTAGTTTTGTACT 57.891 36.000 0.00 0.00 41.04 2.73
2794 4824 7.201145 TGAAGTGTCTCAGTAGTTTTGTACTC 58.799 38.462 0.00 0.00 38.33 2.59
2795 4825 6.086785 AGTGTCTCAGTAGTTTTGTACTCC 57.913 41.667 0.00 0.00 38.33 3.85
2796 4826 5.010820 AGTGTCTCAGTAGTTTTGTACTCCC 59.989 44.000 0.00 0.00 38.33 4.30
2797 4827 5.010820 GTGTCTCAGTAGTTTTGTACTCCCT 59.989 44.000 0.00 0.00 38.33 4.20
2798 4828 5.243283 TGTCTCAGTAGTTTTGTACTCCCTC 59.757 44.000 0.00 0.00 38.33 4.30
2799 4829 5.477637 GTCTCAGTAGTTTTGTACTCCCTCT 59.522 44.000 0.00 0.00 38.33 3.69
2800 4830 5.477291 TCTCAGTAGTTTTGTACTCCCTCTG 59.523 44.000 0.00 0.00 38.33 3.35
2801 4831 5.145564 TCAGTAGTTTTGTACTCCCTCTGT 58.854 41.667 0.00 0.00 38.33 3.41
2802 4832 6.309357 TCAGTAGTTTTGTACTCCCTCTGTA 58.691 40.000 0.00 0.00 38.33 2.74
2803 4833 6.779049 TCAGTAGTTTTGTACTCCCTCTGTAA 59.221 38.462 0.00 0.00 38.33 2.41
2804 4834 7.288389 TCAGTAGTTTTGTACTCCCTCTGTAAA 59.712 37.037 0.00 0.00 38.33 2.01
2805 4835 7.384387 CAGTAGTTTTGTACTCCCTCTGTAAAC 59.616 40.741 0.00 0.00 38.33 2.01
2806 4836 6.496144 AGTTTTGTACTCCCTCTGTAAACT 57.504 37.500 0.00 0.00 28.23 2.66
2807 4837 7.607615 AGTTTTGTACTCCCTCTGTAAACTA 57.392 36.000 0.00 0.00 28.23 2.24
2808 4838 8.026396 AGTTTTGTACTCCCTCTGTAAACTAA 57.974 34.615 0.00 0.00 28.23 2.24
2809 4839 8.657712 AGTTTTGTACTCCCTCTGTAAACTAAT 58.342 33.333 0.00 0.00 28.23 1.73
2810 4840 9.933723 GTTTTGTACTCCCTCTGTAAACTAATA 57.066 33.333 0.00 0.00 0.00 0.98
2817 4847 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
2819 4849 8.639761 TCCCTCTGTAAACTAATATAAGAGTGC 58.360 37.037 0.00 0.00 0.00 4.40
2820 4850 8.643324 CCCTCTGTAAACTAATATAAGAGTGCT 58.357 37.037 0.00 0.00 0.00 4.40
2869 4899 8.862550 AACGTTCTTATATTAGTTTACGGAGG 57.137 34.615 0.00 0.00 32.54 4.30
2870 4900 7.428826 ACGTTCTTATATTAGTTTACGGAGGG 58.571 38.462 13.71 0.00 32.54 4.30
2871 4901 7.285401 ACGTTCTTATATTAGTTTACGGAGGGA 59.715 37.037 13.71 0.00 32.54 4.20
2936 4976 3.118038 TCCCCTATAACTTGTGCATGTCC 60.118 47.826 0.00 0.00 0.00 4.02
3020 5061 9.005777 GTTGTCCTATTTCCTGTTGTGTAAATA 57.994 33.333 0.00 0.00 0.00 1.40
3043 5084 1.798813 CTCTTTGCCGTTTTCGCTAGT 59.201 47.619 0.00 0.00 42.58 2.57
3073 5114 3.195610 TCTGTGGAATTGCTAGACGTCAT 59.804 43.478 19.50 5.54 0.00 3.06
3074 5115 3.261580 TGTGGAATTGCTAGACGTCATG 58.738 45.455 19.50 10.79 0.00 3.07
3075 5116 2.030946 GTGGAATTGCTAGACGTCATGC 59.969 50.000 19.50 20.30 0.00 4.06
3077 5118 2.193447 GAATTGCTAGACGTCATGCGA 58.807 47.619 19.50 19.79 44.77 5.10
3078 5119 1.845266 ATTGCTAGACGTCATGCGAG 58.155 50.000 19.50 7.61 44.77 5.03
3079 5120 0.808755 TTGCTAGACGTCATGCGAGA 59.191 50.000 19.50 8.45 44.77 4.04
3080 5121 0.378610 TGCTAGACGTCATGCGAGAG 59.621 55.000 19.50 4.14 44.77 3.20
3081 5122 0.378962 GCTAGACGTCATGCGAGAGT 59.621 55.000 19.50 0.00 44.77 3.24
3082 5123 1.598132 GCTAGACGTCATGCGAGAGTA 59.402 52.381 19.50 0.00 44.77 2.59
3083 5124 2.031807 GCTAGACGTCATGCGAGAGTAA 59.968 50.000 19.50 0.00 44.77 2.24
3084 5125 2.546195 AGACGTCATGCGAGAGTAAC 57.454 50.000 19.50 0.00 44.77 2.50
3085 5126 2.085320 AGACGTCATGCGAGAGTAACT 58.915 47.619 19.50 0.00 44.77 2.24
3086 5127 3.268330 AGACGTCATGCGAGAGTAACTA 58.732 45.455 19.50 0.00 44.77 2.24
3087 5128 3.688185 AGACGTCATGCGAGAGTAACTAA 59.312 43.478 19.50 0.00 44.77 2.24
3088 5129 4.335874 AGACGTCATGCGAGAGTAACTAAT 59.664 41.667 19.50 0.00 44.77 1.73
3089 5130 4.995124 ACGTCATGCGAGAGTAACTAATT 58.005 39.130 14.88 0.00 44.77 1.40
3090 5131 6.037940 AGACGTCATGCGAGAGTAACTAATTA 59.962 38.462 19.50 0.00 44.77 1.40
3091 5132 6.558009 ACGTCATGCGAGAGTAACTAATTAA 58.442 36.000 14.88 0.00 44.77 1.40
3092 5133 6.471519 ACGTCATGCGAGAGTAACTAATTAAC 59.528 38.462 14.88 0.00 44.77 2.01
3093 5134 6.344002 CGTCATGCGAGAGTAACTAATTAACG 60.344 42.308 3.85 0.00 44.77 3.18
3094 5135 6.690098 GTCATGCGAGAGTAACTAATTAACGA 59.310 38.462 0.00 0.00 0.00 3.85
3095 5136 6.910972 TCATGCGAGAGTAACTAATTAACGAG 59.089 38.462 0.00 0.00 0.00 4.18
3096 5137 5.032863 TGCGAGAGTAACTAATTAACGAGC 58.967 41.667 0.00 0.00 0.00 5.03
3097 5138 4.144391 GCGAGAGTAACTAATTAACGAGCG 59.856 45.833 0.00 0.00 0.00 5.03
3098 5139 4.144391 CGAGAGTAACTAATTAACGAGCGC 59.856 45.833 0.00 0.00 0.00 5.92
3099 5140 5.246145 AGAGTAACTAATTAACGAGCGCT 57.754 39.130 11.27 11.27 0.00 5.92
3100 5141 5.272397 AGAGTAACTAATTAACGAGCGCTC 58.728 41.667 27.64 27.64 0.00 5.03
3101 5142 5.066246 AGAGTAACTAATTAACGAGCGCTCT 59.934 40.000 32.88 19.27 0.00 4.09
3102 5143 5.648572 AGTAACTAATTAACGAGCGCTCTT 58.351 37.500 32.88 25.86 0.00 2.85
3103 5144 6.098017 AGTAACTAATTAACGAGCGCTCTTT 58.902 36.000 32.88 30.78 0.00 2.52
3104 5145 5.857822 AACTAATTAACGAGCGCTCTTTT 57.142 34.783 30.67 25.26 0.00 2.27
3105 5146 5.204673 ACTAATTAACGAGCGCTCTTTTG 57.795 39.130 30.67 19.65 0.00 2.44
3106 5147 3.471495 AATTAACGAGCGCTCTTTTGG 57.529 42.857 30.67 19.29 0.00 3.28
3107 5148 1.153353 TTAACGAGCGCTCTTTTGGG 58.847 50.000 30.67 18.60 0.00 4.12
3108 5149 0.319083 TAACGAGCGCTCTTTTGGGA 59.681 50.000 30.67 12.94 0.00 4.37
3109 5150 0.951040 AACGAGCGCTCTTTTGGGAG 60.951 55.000 32.88 18.03 36.50 4.30
3124 5165 3.410960 GGAGCCTCCCAATGATCAC 57.589 57.895 0.00 0.00 0.00 3.06
3125 5166 0.842635 GGAGCCTCCCAATGATCACT 59.157 55.000 0.00 0.00 0.00 3.41
3126 5167 1.213926 GGAGCCTCCCAATGATCACTT 59.786 52.381 0.00 0.00 0.00 3.16
3127 5168 2.295885 GAGCCTCCCAATGATCACTTG 58.704 52.381 0.00 4.31 0.00 3.16
3128 5169 0.743097 GCCTCCCAATGATCACTTGC 59.257 55.000 0.00 0.00 0.00 4.01
3129 5170 1.019673 CCTCCCAATGATCACTTGCG 58.980 55.000 0.00 0.00 0.00 4.85
3130 5171 1.679944 CCTCCCAATGATCACTTGCGT 60.680 52.381 0.00 0.00 0.00 5.24
3131 5172 1.399440 CTCCCAATGATCACTTGCGTG 59.601 52.381 0.00 0.00 42.59 5.34
3132 5173 0.452987 CCCAATGATCACTTGCGTGG 59.547 55.000 0.00 0.00 41.53 4.94
3133 5174 0.452987 CCAATGATCACTTGCGTGGG 59.547 55.000 0.00 0.00 41.53 4.61
3134 5175 0.179156 CAATGATCACTTGCGTGGGC 60.179 55.000 0.00 0.00 41.53 5.36
3135 5176 0.322816 AATGATCACTTGCGTGGGCT 60.323 50.000 0.00 0.00 41.53 5.19
3136 5177 0.541392 ATGATCACTTGCGTGGGCTA 59.459 50.000 0.00 0.00 41.53 3.93
3137 5178 0.323302 TGATCACTTGCGTGGGCTAA 59.677 50.000 0.00 0.00 41.53 3.09
3138 5179 1.009829 GATCACTTGCGTGGGCTAAG 58.990 55.000 0.00 0.00 41.53 2.18
3139 5180 0.613260 ATCACTTGCGTGGGCTAAGA 59.387 50.000 0.00 0.00 41.53 2.10
3140 5181 0.394938 TCACTTGCGTGGGCTAAGAA 59.605 50.000 0.00 0.00 41.53 2.52
3141 5182 0.517316 CACTTGCGTGGGCTAAGAAC 59.483 55.000 0.00 0.00 40.82 3.01
3142 5183 0.949105 ACTTGCGTGGGCTAAGAACG 60.949 55.000 0.00 0.00 40.82 3.95
3143 5184 0.949105 CTTGCGTGGGCTAAGAACGT 60.949 55.000 0.00 0.00 39.45 3.99
3144 5185 1.225376 TTGCGTGGGCTAAGAACGTG 61.225 55.000 0.00 0.00 39.45 4.49
3145 5186 3.023591 GCGTGGGCTAAGAACGTGC 62.024 63.158 0.00 0.00 39.45 5.34
3146 5187 2.388232 CGTGGGCTAAGAACGTGCC 61.388 63.158 5.31 5.31 45.42 5.01
3149 5190 4.695560 GGCTAAGAACGTGCCACT 57.304 55.556 8.85 0.00 45.46 4.00
3150 5191 2.928416 GGCTAAGAACGTGCCACTT 58.072 52.632 8.85 6.01 45.46 3.16
3151 5192 0.517316 GGCTAAGAACGTGCCACTTG 59.483 55.000 8.85 1.43 45.46 3.16
3152 5193 1.508632 GCTAAGAACGTGCCACTTGA 58.491 50.000 0.00 0.00 0.00 3.02
3153 5194 1.461127 GCTAAGAACGTGCCACTTGAG 59.539 52.381 0.00 0.00 0.00 3.02
3154 5195 2.866460 GCTAAGAACGTGCCACTTGAGA 60.866 50.000 0.00 0.00 0.00 3.27
3155 5196 1.583054 AAGAACGTGCCACTTGAGAC 58.417 50.000 0.00 0.00 0.00 3.36
3156 5197 0.597637 AGAACGTGCCACTTGAGACG 60.598 55.000 0.00 0.00 37.82 4.18
3157 5198 2.159272 GAACGTGCCACTTGAGACGC 62.159 60.000 0.00 0.00 35.21 5.19
3158 5199 2.356313 CGTGCCACTTGAGACGCT 60.356 61.111 0.00 0.00 0.00 5.07
3159 5200 2.375766 CGTGCCACTTGAGACGCTC 61.376 63.158 0.00 0.58 0.00 5.03
3160 5201 1.005630 GTGCCACTTGAGACGCTCT 60.006 57.895 8.07 0.00 0.00 4.09
3161 5202 1.011451 GTGCCACTTGAGACGCTCTC 61.011 60.000 8.07 7.90 43.65 3.20
3169 5210 3.897936 AGACGCTCTCAGTCTCCG 58.102 61.111 0.00 0.00 44.87 4.63
3170 5211 2.101380 GACGCTCTCAGTCTCCGC 59.899 66.667 0.00 0.00 35.84 5.54
3171 5212 3.404141 GACGCTCTCAGTCTCCGCC 62.404 68.421 0.00 0.00 35.84 6.13
3172 5213 3.443925 CGCTCTCAGTCTCCGCCA 61.444 66.667 0.00 0.00 0.00 5.69
3173 5214 2.183046 GCTCTCAGTCTCCGCCAC 59.817 66.667 0.00 0.00 0.00 5.01
3174 5215 2.487428 CTCTCAGTCTCCGCCACG 59.513 66.667 0.00 0.00 0.00 4.94
3175 5216 2.282251 TCTCAGTCTCCGCCACGT 60.282 61.111 0.00 0.00 0.00 4.49
3176 5217 2.126307 CTCAGTCTCCGCCACGTG 60.126 66.667 9.08 9.08 0.00 4.49
3177 5218 2.910479 TCAGTCTCCGCCACGTGT 60.910 61.111 15.65 0.00 0.00 4.49
3178 5219 2.029073 CAGTCTCCGCCACGTGTT 59.971 61.111 15.65 0.00 0.00 3.32
3179 5220 1.594293 CAGTCTCCGCCACGTGTTT 60.594 57.895 15.65 0.00 0.00 2.83
3180 5221 1.300697 AGTCTCCGCCACGTGTTTC 60.301 57.895 15.65 2.21 0.00 2.78
3181 5222 2.355363 TCTCCGCCACGTGTTTCG 60.355 61.111 15.65 14.07 46.00 3.46
3182 5223 4.072088 CTCCGCCACGTGTTTCGC 62.072 66.667 15.65 9.62 44.19 4.70
3183 5224 4.595538 TCCGCCACGTGTTTCGCT 62.596 61.111 15.65 0.00 44.19 4.93
3184 5225 4.072088 CCGCCACGTGTTTCGCTC 62.072 66.667 15.65 0.00 44.19 5.03
3185 5226 3.036084 CGCCACGTGTTTCGCTCT 61.036 61.111 15.65 0.00 44.19 4.09
3186 5227 2.551270 GCCACGTGTTTCGCTCTG 59.449 61.111 15.65 0.00 44.19 3.35
3187 5228 1.954146 GCCACGTGTTTCGCTCTGA 60.954 57.895 15.65 0.00 44.19 3.27
3188 5229 1.891060 GCCACGTGTTTCGCTCTGAG 61.891 60.000 15.65 0.00 44.19 3.35
3189 5230 1.488957 CACGTGTTTCGCTCTGAGC 59.511 57.895 19.53 19.53 44.19 4.26
3198 5239 4.908790 GCTCTGAGCGCTTTCTCT 57.091 55.556 13.26 0.00 34.29 3.10
3199 5240 2.371902 GCTCTGAGCGCTTTCTCTG 58.628 57.895 13.26 2.80 34.29 3.35
3200 5241 1.083242 GCTCTGAGCGCTTTCTCTGG 61.083 60.000 13.26 0.00 34.19 3.86
3201 5242 0.529833 CTCTGAGCGCTTTCTCTGGA 59.470 55.000 13.26 1.71 34.19 3.86
3202 5243 1.136695 CTCTGAGCGCTTTCTCTGGAT 59.863 52.381 13.26 0.00 34.19 3.41
3203 5244 1.552337 TCTGAGCGCTTTCTCTGGATT 59.448 47.619 13.26 0.00 34.19 3.01
3204 5245 2.027745 TCTGAGCGCTTTCTCTGGATTT 60.028 45.455 13.26 0.00 34.19 2.17
3205 5246 2.746362 CTGAGCGCTTTCTCTGGATTTT 59.254 45.455 13.26 0.00 34.29 1.82
3206 5247 3.149196 TGAGCGCTTTCTCTGGATTTTT 58.851 40.909 13.26 0.00 34.29 1.94
3226 5267 5.659048 TTTTTAATTTTTCCGCATGCGTT 57.341 30.435 35.55 24.48 37.81 4.84
3227 5268 5.659048 TTTTAATTTTTCCGCATGCGTTT 57.341 30.435 35.55 20.61 37.81 3.60
3228 5269 5.659048 TTTAATTTTTCCGCATGCGTTTT 57.341 30.435 35.55 20.92 37.81 2.43
3229 5270 3.786657 AATTTTTCCGCATGCGTTTTC 57.213 38.095 35.55 0.00 37.81 2.29
3231 5272 0.661780 TTTTCCGCATGCGTTTTCGG 60.662 50.000 35.55 20.71 44.29 4.30
3232 5273 3.602924 TTCCGCATGCGTTTTCGGC 62.603 57.895 35.55 0.00 44.29 5.54
3233 5274 4.101790 CCGCATGCGTTTTCGGCT 62.102 61.111 35.55 0.00 44.29 5.52
3234 5275 2.126888 CGCATGCGTTTTCGGCTT 60.127 55.556 31.33 0.00 44.29 4.35
3235 5276 2.427765 CGCATGCGTTTTCGGCTTG 61.428 57.895 31.33 0.00 44.29 4.01
3236 5277 1.371635 GCATGCGTTTTCGGCTTGT 60.372 52.632 0.00 0.00 44.29 3.16
3237 5278 0.939106 GCATGCGTTTTCGGCTTGTT 60.939 50.000 0.00 0.00 44.29 2.83
3238 5279 1.664588 GCATGCGTTTTCGGCTTGTTA 60.665 47.619 0.00 0.00 44.29 2.41
3239 5280 2.241722 CATGCGTTTTCGGCTTGTTAG 58.758 47.619 0.00 0.00 44.29 2.34
3240 5281 1.584175 TGCGTTTTCGGCTTGTTAGA 58.416 45.000 0.00 0.00 44.29 2.10
3241 5282 2.147958 TGCGTTTTCGGCTTGTTAGAT 58.852 42.857 0.00 0.00 44.29 1.98
3242 5283 2.095969 TGCGTTTTCGGCTTGTTAGATG 60.096 45.455 0.00 0.00 44.29 2.90
3243 5284 2.095919 GCGTTTTCGGCTTGTTAGATGT 60.096 45.455 0.00 0.00 44.29 3.06
3244 5285 3.608474 GCGTTTTCGGCTTGTTAGATGTT 60.608 43.478 0.00 0.00 44.29 2.71
3245 5286 4.148891 CGTTTTCGGCTTGTTAGATGTTC 58.851 43.478 0.00 0.00 39.94 3.18
3246 5287 4.084013 CGTTTTCGGCTTGTTAGATGTTCT 60.084 41.667 0.00 0.00 39.94 3.01
3247 5288 5.560183 CGTTTTCGGCTTGTTAGATGTTCTT 60.560 40.000 0.00 0.00 39.94 2.52
3248 5289 6.206498 GTTTTCGGCTTGTTAGATGTTCTTT 58.794 36.000 0.00 0.00 0.00 2.52
3249 5290 6.385649 TTTCGGCTTGTTAGATGTTCTTTT 57.614 33.333 0.00 0.00 0.00 2.27
3250 5291 6.385649 TTCGGCTTGTTAGATGTTCTTTTT 57.614 33.333 0.00 0.00 0.00 1.94
3251 5292 5.757886 TCGGCTTGTTAGATGTTCTTTTTG 58.242 37.500 0.00 0.00 0.00 2.44
3252 5293 4.917415 CGGCTTGTTAGATGTTCTTTTTGG 59.083 41.667 0.00 0.00 0.00 3.28
3253 5294 4.686091 GGCTTGTTAGATGTTCTTTTTGGC 59.314 41.667 0.00 0.00 0.00 4.52
3254 5295 5.509670 GGCTTGTTAGATGTTCTTTTTGGCT 60.510 40.000 0.00 0.00 0.00 4.75
3255 5296 5.985530 GCTTGTTAGATGTTCTTTTTGGCTT 59.014 36.000 0.00 0.00 0.00 4.35
3256 5297 6.479990 GCTTGTTAGATGTTCTTTTTGGCTTT 59.520 34.615 0.00 0.00 0.00 3.51
3257 5298 7.306807 GCTTGTTAGATGTTCTTTTTGGCTTTC 60.307 37.037 0.00 0.00 0.00 2.62
3258 5299 6.512297 TGTTAGATGTTCTTTTTGGCTTTCC 58.488 36.000 0.00 0.00 0.00 3.13
3259 5300 4.243007 AGATGTTCTTTTTGGCTTTCCG 57.757 40.909 0.00 0.00 34.14 4.30
3260 5301 2.880963 TGTTCTTTTTGGCTTTCCGG 57.119 45.000 0.00 0.00 34.14 5.14
3261 5302 2.104170 TGTTCTTTTTGGCTTTCCGGT 58.896 42.857 0.00 0.00 34.14 5.28
3262 5303 2.498078 TGTTCTTTTTGGCTTTCCGGTT 59.502 40.909 0.00 0.00 34.14 4.44
3263 5304 3.055747 TGTTCTTTTTGGCTTTCCGGTTT 60.056 39.130 0.00 0.00 34.14 3.27
3264 5305 3.897141 TCTTTTTGGCTTTCCGGTTTT 57.103 38.095 0.00 0.00 34.14 2.43
3265 5306 4.209307 TCTTTTTGGCTTTCCGGTTTTT 57.791 36.364 0.00 0.00 34.14 1.94
3266 5307 4.185394 TCTTTTTGGCTTTCCGGTTTTTC 58.815 39.130 0.00 0.00 34.14 2.29
3267 5308 3.611766 TTTTGGCTTTCCGGTTTTTCA 57.388 38.095 0.00 0.00 34.14 2.69
3268 5309 2.588027 TTGGCTTTCCGGTTTTTCAC 57.412 45.000 0.00 0.00 34.14 3.18
3269 5310 0.747852 TGGCTTTCCGGTTTTTCACC 59.252 50.000 0.00 0.00 43.16 4.02
3270 5311 1.037493 GGCTTTCCGGTTTTTCACCT 58.963 50.000 0.00 0.00 44.69 4.00
3271 5312 1.269569 GGCTTTCCGGTTTTTCACCTG 60.270 52.381 0.00 0.00 44.69 4.00
3272 5313 1.407618 GCTTTCCGGTTTTTCACCTGT 59.592 47.619 0.00 0.00 44.69 4.00
3273 5314 2.543031 GCTTTCCGGTTTTTCACCTGTC 60.543 50.000 0.00 0.00 44.69 3.51
3274 5315 2.721425 TTCCGGTTTTTCACCTGTCT 57.279 45.000 0.00 0.00 44.69 3.41
3275 5316 2.721425 TCCGGTTTTTCACCTGTCTT 57.279 45.000 0.00 0.00 44.69 3.01
3276 5317 3.842007 TCCGGTTTTTCACCTGTCTTA 57.158 42.857 0.00 0.00 44.69 2.10
3277 5318 4.360951 TCCGGTTTTTCACCTGTCTTAT 57.639 40.909 0.00 0.00 44.69 1.73
3278 5319 4.721132 TCCGGTTTTTCACCTGTCTTATT 58.279 39.130 0.00 0.00 44.69 1.40
3279 5320 5.134661 TCCGGTTTTTCACCTGTCTTATTT 58.865 37.500 0.00 0.00 44.69 1.40
3280 5321 5.595133 TCCGGTTTTTCACCTGTCTTATTTT 59.405 36.000 0.00 0.00 44.69 1.82
3281 5322 6.097129 TCCGGTTTTTCACCTGTCTTATTTTT 59.903 34.615 0.00 0.00 44.69 1.94
3316 5357 5.356882 TTTTAACTTTCATGAGAGGCACG 57.643 39.130 16.92 0.00 0.00 5.34
3317 5358 2.839486 AACTTTCATGAGAGGCACGA 57.161 45.000 16.92 0.00 0.00 4.35
3318 5359 3.340814 AACTTTCATGAGAGGCACGAT 57.659 42.857 16.92 0.00 0.00 3.73
3319 5360 3.340814 ACTTTCATGAGAGGCACGATT 57.659 42.857 16.92 0.00 0.00 3.34
3320 5361 3.679389 ACTTTCATGAGAGGCACGATTT 58.321 40.909 16.92 0.00 0.00 2.17
3321 5362 4.074970 ACTTTCATGAGAGGCACGATTTT 58.925 39.130 16.92 0.00 0.00 1.82
3322 5363 4.083110 ACTTTCATGAGAGGCACGATTTTG 60.083 41.667 16.92 0.00 0.00 2.44
3323 5364 1.739466 TCATGAGAGGCACGATTTTGC 59.261 47.619 0.00 0.00 42.18 3.68
3324 5365 1.741706 CATGAGAGGCACGATTTTGCT 59.258 47.619 0.00 0.00 42.56 3.91
3325 5366 1.896220 TGAGAGGCACGATTTTGCTT 58.104 45.000 0.00 0.00 42.56 3.91
3326 5367 2.229792 TGAGAGGCACGATTTTGCTTT 58.770 42.857 0.00 0.00 42.56 3.51
3327 5368 2.226437 TGAGAGGCACGATTTTGCTTTC 59.774 45.455 0.00 0.00 42.56 2.62
3328 5369 1.197721 AGAGGCACGATTTTGCTTTCG 59.802 47.619 0.00 0.00 42.56 3.46
3329 5370 0.387239 AGGCACGATTTTGCTTTCGC 60.387 50.000 0.00 0.00 42.56 4.70
3330 5371 1.664643 GGCACGATTTTGCTTTCGCG 61.665 55.000 0.00 0.00 42.56 5.87
3331 5372 0.724453 GCACGATTTTGCTTTCGCGA 60.724 50.000 3.71 3.71 39.59 5.87
3332 5373 1.241744 CACGATTTTGCTTTCGCGAG 58.758 50.000 9.59 0.00 38.91 5.03
3333 5374 1.136363 CACGATTTTGCTTTCGCGAGA 60.136 47.619 9.59 3.35 38.91 4.04
3334 5375 1.126846 ACGATTTTGCTTTCGCGAGAG 59.873 47.619 21.42 21.42 43.69 3.20
3335 5376 1.527793 CGATTTTGCTTTCGCGAGAGG 60.528 52.381 25.84 13.55 43.69 3.69
3336 5377 0.169009 ATTTTGCTTTCGCGAGAGGC 59.831 50.000 25.84 21.76 43.69 4.70
3337 5378 1.163420 TTTTGCTTTCGCGAGAGGCA 61.163 50.000 25.84 23.78 44.45 4.75
3338 5379 1.841663 TTTGCTTTCGCGAGAGGCAC 61.842 55.000 25.84 11.56 45.26 5.01
3339 5380 3.843240 GCTTTCGCGAGAGGCACG 61.843 66.667 25.84 3.72 43.84 5.34
3340 5381 3.181967 CTTTCGCGAGAGGCACGG 61.182 66.667 18.35 0.00 43.84 4.94
3353 5394 3.733960 CACGGCCGTGTCTCTCGA 61.734 66.667 42.92 0.00 40.91 4.04
3354 5395 2.981909 ACGGCCGTGTCTCTCGAA 60.982 61.111 33.75 0.00 0.00 3.71
3355 5396 2.257371 CGGCCGTGTCTCTCGAAA 59.743 61.111 19.50 0.00 0.00 3.46
3356 5397 1.372499 CGGCCGTGTCTCTCGAAAA 60.372 57.895 19.50 0.00 0.00 2.29
3357 5398 1.615107 CGGCCGTGTCTCTCGAAAAC 61.615 60.000 19.50 0.00 0.00 2.43
3358 5399 1.615107 GGCCGTGTCTCTCGAAAACG 61.615 60.000 0.00 0.00 33.58 3.60
3359 5400 0.662374 GCCGTGTCTCTCGAAAACGA 60.662 55.000 0.00 0.00 34.93 3.85
3360 5401 1.978542 CCGTGTCTCTCGAAAACGAT 58.021 50.000 0.00 0.00 34.93 3.73
3361 5402 2.325761 CCGTGTCTCTCGAAAACGATT 58.674 47.619 0.00 0.00 34.93 3.34
3362 5403 2.729882 CCGTGTCTCTCGAAAACGATTT 59.270 45.455 0.00 0.00 34.93 2.17
3363 5404 3.183775 CCGTGTCTCTCGAAAACGATTTT 59.816 43.478 0.00 0.00 34.93 1.82
3364 5405 4.318546 CCGTGTCTCTCGAAAACGATTTTT 60.319 41.667 0.00 0.00 37.65 1.94
3383 5424 3.708563 TTTTCCTTCTTTGCTTCCGTG 57.291 42.857 0.00 0.00 0.00 4.94
3384 5425 2.631160 TTCCTTCTTTGCTTCCGTGA 57.369 45.000 0.00 0.00 0.00 4.35
3385 5426 2.631160 TCCTTCTTTGCTTCCGTGAA 57.369 45.000 0.00 0.00 0.00 3.18
3386 5427 2.925724 TCCTTCTTTGCTTCCGTGAAA 58.074 42.857 0.00 0.00 0.00 2.69
3387 5428 2.878406 TCCTTCTTTGCTTCCGTGAAAG 59.122 45.455 0.00 0.00 0.00 2.62
3388 5429 2.030805 CCTTCTTTGCTTCCGTGAAAGG 60.031 50.000 0.00 0.00 0.00 3.11
3389 5430 0.951558 TCTTTGCTTCCGTGAAAGGC 59.048 50.000 0.00 0.00 0.00 4.35
3390 5431 0.667993 CTTTGCTTCCGTGAAAGGCA 59.332 50.000 0.00 0.00 0.00 4.75
3391 5432 0.383949 TTTGCTTCCGTGAAAGGCAC 59.616 50.000 0.00 0.00 44.21 5.01
3402 5443 4.224715 GTGAAAGGCACAGTTTACCTTC 57.775 45.455 0.00 0.00 46.91 3.46
3403 5444 3.883489 GTGAAAGGCACAGTTTACCTTCT 59.117 43.478 0.00 0.00 46.91 2.85
3404 5445 3.882888 TGAAAGGCACAGTTTACCTTCTG 59.117 43.478 0.00 0.00 42.99 3.02
3405 5446 1.897560 AGGCACAGTTTACCTTCTGC 58.102 50.000 0.00 0.00 35.37 4.26
3406 5447 0.517316 GGCACAGTTTACCTTCTGCG 59.483 55.000 0.00 0.00 35.37 5.18
3407 5448 1.508632 GCACAGTTTACCTTCTGCGA 58.491 50.000 0.00 0.00 35.37 5.10
3408 5449 1.461127 GCACAGTTTACCTTCTGCGAG 59.539 52.381 0.00 0.00 35.37 5.03
3409 5450 2.866460 GCACAGTTTACCTTCTGCGAGA 60.866 50.000 0.00 0.00 35.37 4.04
3410 5451 2.989840 CACAGTTTACCTTCTGCGAGAG 59.010 50.000 0.00 0.00 35.37 3.20
3411 5452 2.028930 ACAGTTTACCTTCTGCGAGAGG 60.029 50.000 0.00 0.00 35.37 3.69
3412 5453 1.066787 AGTTTACCTTCTGCGAGAGGC 60.067 52.381 0.00 0.00 43.96 4.70
3437 5478 3.432588 CGCCTCTCGGACACGTCT 61.433 66.667 0.00 0.00 41.85 4.18
3438 5479 2.963371 GCCTCTCGGACACGTCTT 59.037 61.111 0.00 0.00 41.85 3.01
3439 5480 1.289380 GCCTCTCGGACACGTCTTT 59.711 57.895 0.00 0.00 41.85 2.52
3440 5481 0.733223 GCCTCTCGGACACGTCTTTC 60.733 60.000 0.00 0.00 41.85 2.62
3441 5482 0.454620 CCTCTCGGACACGTCTTTCG 60.455 60.000 0.00 0.00 46.00 3.46
3442 5483 0.454620 CTCTCGGACACGTCTTTCGG 60.455 60.000 0.00 0.00 44.69 4.30
3443 5484 0.886043 TCTCGGACACGTCTTTCGGA 60.886 55.000 0.00 0.00 44.69 4.55
3444 5485 0.039798 CTCGGACACGTCTTTCGGAA 60.040 55.000 0.00 0.00 44.69 4.30
3445 5486 0.385029 TCGGACACGTCTTTCGGAAA 59.615 50.000 2.78 2.78 44.69 3.13
3446 5487 0.782384 CGGACACGTCTTTCGGAAAG 59.218 55.000 21.64 21.64 44.69 2.62
3447 5488 1.145803 GGACACGTCTTTCGGAAAGG 58.854 55.000 25.66 15.42 44.69 3.11
3448 5489 1.269936 GGACACGTCTTTCGGAAAGGA 60.270 52.381 25.66 12.79 44.69 3.36
3449 5490 2.476821 GACACGTCTTTCGGAAAGGAA 58.523 47.619 25.66 8.87 44.69 3.36
3450 5491 2.867975 GACACGTCTTTCGGAAAGGAAA 59.132 45.455 25.66 8.21 44.69 3.13
3451 5492 3.272581 ACACGTCTTTCGGAAAGGAAAA 58.727 40.909 25.66 7.88 44.69 2.29
3452 5493 3.690628 ACACGTCTTTCGGAAAGGAAAAA 59.309 39.130 25.66 7.54 44.69 1.94
3471 5512 4.729227 AAAAACATGTTCCCAGTTCGTT 57.271 36.364 12.39 0.00 0.00 3.85
3472 5513 4.729227 AAAACATGTTCCCAGTTCGTTT 57.271 36.364 12.39 0.00 0.00 3.60
3473 5514 4.729227 AAACATGTTCCCAGTTCGTTTT 57.271 36.364 12.39 0.00 0.00 2.43
3474 5515 4.729227 AACATGTTCCCAGTTCGTTTTT 57.271 36.364 4.92 0.00 0.00 1.94
3513 5554 4.563337 AAAAAGTTCGTCAAAGCCTACC 57.437 40.909 0.00 0.00 0.00 3.18
3514 5555 2.922740 AAGTTCGTCAAAGCCTACCA 57.077 45.000 0.00 0.00 0.00 3.25
3515 5556 2.922740 AGTTCGTCAAAGCCTACCAA 57.077 45.000 0.00 0.00 0.00 3.67
3516 5557 2.490991 AGTTCGTCAAAGCCTACCAAC 58.509 47.619 0.00 0.00 0.00 3.77
3517 5558 2.158871 AGTTCGTCAAAGCCTACCAACA 60.159 45.455 0.00 0.00 0.00 3.33
3518 5559 2.812011 GTTCGTCAAAGCCTACCAACAT 59.188 45.455 0.00 0.00 0.00 2.71
3519 5560 2.422597 TCGTCAAAGCCTACCAACATG 58.577 47.619 0.00 0.00 0.00 3.21
3520 5561 1.468520 CGTCAAAGCCTACCAACATGG 59.531 52.381 0.00 0.00 45.02 3.66
3521 5562 1.818674 GTCAAAGCCTACCAACATGGG 59.181 52.381 0.00 0.00 43.37 4.00
3522 5563 1.707989 TCAAAGCCTACCAACATGGGA 59.292 47.619 0.00 0.00 43.37 4.37
3523 5564 2.311542 TCAAAGCCTACCAACATGGGAT 59.688 45.455 0.00 0.00 43.37 3.85
3524 5565 2.689983 CAAAGCCTACCAACATGGGATC 59.310 50.000 0.00 0.00 43.37 3.36
3525 5566 1.898863 AGCCTACCAACATGGGATCT 58.101 50.000 0.00 0.00 43.37 2.75
3526 5567 3.060479 AGCCTACCAACATGGGATCTA 57.940 47.619 0.00 0.00 43.37 1.98
3527 5568 2.975489 AGCCTACCAACATGGGATCTAG 59.025 50.000 0.00 0.00 43.37 2.43
3528 5569 2.706190 GCCTACCAACATGGGATCTAGT 59.294 50.000 0.00 0.00 43.37 2.57
3529 5570 3.136626 GCCTACCAACATGGGATCTAGTT 59.863 47.826 0.00 0.00 43.37 2.24
3530 5571 4.385310 GCCTACCAACATGGGATCTAGTTT 60.385 45.833 0.00 0.00 43.37 2.66
3531 5572 5.755849 CCTACCAACATGGGATCTAGTTTT 58.244 41.667 0.00 0.00 43.37 2.43
3532 5573 5.590259 CCTACCAACATGGGATCTAGTTTTG 59.410 44.000 0.00 0.00 43.37 2.44
3533 5574 5.255397 ACCAACATGGGATCTAGTTTTGA 57.745 39.130 0.00 0.00 43.37 2.69
3534 5575 5.640147 ACCAACATGGGATCTAGTTTTGAA 58.360 37.500 0.00 0.00 43.37 2.69
3535 5576 5.711976 ACCAACATGGGATCTAGTTTTGAAG 59.288 40.000 0.00 0.00 43.37 3.02
3536 5577 5.945784 CCAACATGGGATCTAGTTTTGAAGA 59.054 40.000 0.00 0.00 32.67 2.87
3537 5578 6.604795 CCAACATGGGATCTAGTTTTGAAGAT 59.395 38.462 0.00 0.00 32.67 2.40
3538 5579 7.201767 CCAACATGGGATCTAGTTTTGAAGATC 60.202 40.741 0.00 4.15 37.15 2.75
3539 5580 7.205515 ACATGGGATCTAGTTTTGAAGATCT 57.794 36.000 11.05 0.00 37.77 2.75
3540 5581 7.278875 ACATGGGATCTAGTTTTGAAGATCTC 58.721 38.462 11.05 8.38 38.41 2.75
3541 5582 6.874278 TGGGATCTAGTTTTGAAGATCTCA 57.126 37.500 10.15 10.15 43.51 3.27
3542 5583 7.257790 TGGGATCTAGTTTTGAAGATCTCAA 57.742 36.000 11.48 0.00 42.99 3.02
3543 5584 7.106239 TGGGATCTAGTTTTGAAGATCTCAAC 58.894 38.462 11.48 0.00 42.99 3.18
3544 5585 6.256757 GGGATCTAGTTTTGAAGATCTCAACG 59.743 42.308 11.05 0.00 43.90 4.10
3545 5586 6.237969 GGATCTAGTTTTGAAGATCTCAACGC 60.238 42.308 11.05 0.00 43.90 4.84
3546 5587 3.795561 AGTTTTGAAGATCTCAACGCG 57.204 42.857 3.53 3.53 43.90 6.01
3547 5588 3.390135 AGTTTTGAAGATCTCAACGCGA 58.610 40.909 15.93 0.00 43.90 5.87
3548 5589 3.430218 AGTTTTGAAGATCTCAACGCGAG 59.570 43.478 15.93 4.76 43.90 5.03
3557 5598 2.510615 CTCAACGCGAGAAATCCAAC 57.489 50.000 15.93 0.00 45.45 3.77
3558 5599 2.069273 CTCAACGCGAGAAATCCAACT 58.931 47.619 15.93 0.00 45.45 3.16
3559 5600 1.798223 TCAACGCGAGAAATCCAACTG 59.202 47.619 15.93 0.00 0.00 3.16
3560 5601 1.531149 CAACGCGAGAAATCCAACTGT 59.469 47.619 15.93 0.00 0.00 3.55
3561 5602 1.148310 ACGCGAGAAATCCAACTGTG 58.852 50.000 15.93 0.00 0.00 3.66
3562 5603 1.270094 ACGCGAGAAATCCAACTGTGA 60.270 47.619 15.93 0.00 0.00 3.58
3563 5604 1.798223 CGCGAGAAATCCAACTGTGAA 59.202 47.619 0.00 0.00 0.00 3.18
3564 5605 2.223144 CGCGAGAAATCCAACTGTGAAA 59.777 45.455 0.00 0.00 0.00 2.69
3565 5606 3.303725 CGCGAGAAATCCAACTGTGAAAA 60.304 43.478 0.00 0.00 0.00 2.29
3566 5607 4.613622 CGCGAGAAATCCAACTGTGAAAAT 60.614 41.667 0.00 0.00 0.00 1.82
3567 5608 4.618489 GCGAGAAATCCAACTGTGAAAATG 59.382 41.667 0.00 0.00 0.00 2.32
3568 5609 5.156355 CGAGAAATCCAACTGTGAAAATGG 58.844 41.667 0.00 0.00 0.00 3.16
3569 5610 5.278463 CGAGAAATCCAACTGTGAAAATGGT 60.278 40.000 0.00 0.00 34.50 3.55
3570 5611 6.484364 AGAAATCCAACTGTGAAAATGGTT 57.516 33.333 0.00 0.00 34.50 3.67
3571 5612 6.888105 AGAAATCCAACTGTGAAAATGGTTT 58.112 32.000 0.00 0.00 34.50 3.27
3572 5613 8.017418 AGAAATCCAACTGTGAAAATGGTTTA 57.983 30.769 0.00 0.00 34.50 2.01
3573 5614 8.482128 AGAAATCCAACTGTGAAAATGGTTTAA 58.518 29.630 0.00 0.00 34.50 1.52
3574 5615 8.661352 AAATCCAACTGTGAAAATGGTTTAAG 57.339 30.769 0.00 0.00 34.50 1.85
3575 5616 7.595819 ATCCAACTGTGAAAATGGTTTAAGA 57.404 32.000 0.00 0.00 34.50 2.10
3576 5617 7.595819 TCCAACTGTGAAAATGGTTTAAGAT 57.404 32.000 0.00 0.00 34.50 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
401 412 2.742372 CCAAGACAGAACCGGGCG 60.742 66.667 6.32 0.00 0.00 6.13
669 690 2.106332 CGCTAGGGATTTCGCCGT 59.894 61.111 0.00 0.00 0.00 5.68
685 706 3.349006 AACAGCACAGCTTCCGCG 61.349 61.111 0.00 0.00 42.32 6.46
764 794 4.101448 CCTCCAAGCTCCCGGTGG 62.101 72.222 0.00 0.09 0.00 4.61
835 874 1.302383 AACGGCGCGATTTGATCCAA 61.302 50.000 12.10 0.00 0.00 3.53
896 935 2.036256 CTTTGGCCCTGGACCTGG 59.964 66.667 10.46 10.46 0.00 4.45
1003 1042 0.250727 ACGGTGTCCAAACCCATGAG 60.251 55.000 0.00 0.00 36.84 2.90
1021 1060 1.076549 TCCTGTCCCCATTGGCAAC 59.923 57.895 0.00 0.00 0.00 4.17
1097 1139 4.147322 CATCGTCGCCGCCACAAC 62.147 66.667 0.00 0.00 0.00 3.32
1130 1172 3.972537 CGTCTGATTTGCGCATGC 58.027 55.556 12.75 7.91 43.20 4.06
1164 1206 2.084610 TGAGCATCAACTTGTCCGAG 57.915 50.000 0.00 0.00 45.97 4.63
1271 1313 2.354072 CGAATCTCTCCGCCTCGC 60.354 66.667 0.00 0.00 0.00 5.03
1407 1492 4.037927 TCGAGGAAAATCAGAACCCCTAT 58.962 43.478 0.00 0.00 0.00 2.57
1408 1493 3.446968 TCGAGGAAAATCAGAACCCCTA 58.553 45.455 0.00 0.00 0.00 3.53
1418 1503 5.385509 TTTCCATGGTTTCGAGGAAAATC 57.614 39.130 12.58 0.00 44.59 2.17
1419 1504 4.220602 CCTTTCCATGGTTTCGAGGAAAAT 59.779 41.667 12.58 0.00 46.19 1.82
1427 1512 1.173913 GACCCCTTTCCATGGTTTCG 58.826 55.000 12.58 0.00 30.97 3.46
1433 1518 5.480073 TCAAGTAAATTGACCCCTTTCCATG 59.520 40.000 0.00 0.00 43.09 3.66
1435 1520 5.068215 TCAAGTAAATTGACCCCTTTCCA 57.932 39.130 0.00 0.00 43.09 3.53
1447 1532 7.095523 GCACATGCACAGAAAATCAAGTAAATT 60.096 33.333 0.00 0.00 41.59 1.82
1588 1677 1.269051 CCGCTGTTGAGTTTTTGTCCC 60.269 52.381 0.00 0.00 0.00 4.46
1594 1683 1.308998 CAGGACCGCTGTTGAGTTTT 58.691 50.000 0.00 0.00 0.00 2.43
1596 1685 1.598130 GCAGGACCGCTGTTGAGTT 60.598 57.895 1.67 0.00 0.00 3.01
1597 1686 2.031163 GCAGGACCGCTGTTGAGT 59.969 61.111 1.67 0.00 0.00 3.41
1598 1687 3.114616 CGCAGGACCGCTGTTGAG 61.115 66.667 6.72 0.00 0.00 3.02
1614 1711 1.597027 AAGGTTTGAGTGGCGGACG 60.597 57.895 0.00 0.00 0.00 4.79
1624 1721 3.072915 TGGAGAAGATCTGCAAGGTTTGA 59.927 43.478 2.79 0.00 41.94 2.69
1700 1797 1.300620 CGTCTCGGACAGCAACCAA 60.301 57.895 5.15 0.00 32.09 3.67
1816 1913 4.202461 TGTGCAATCAAGGTCTCTAAAGGT 60.202 41.667 0.00 0.00 0.00 3.50
1822 1919 1.701847 AGGTGTGCAATCAAGGTCTCT 59.298 47.619 0.00 0.00 0.00 3.10
1845 1946 4.530161 TCCCATTAATCAACAACAAAGGGG 59.470 41.667 0.00 0.00 41.43 4.79
1850 1951 9.650539 CATTGTTATCCCATTAATCAACAACAA 57.349 29.630 11.34 11.34 38.33 2.83
1870 1971 3.093814 TCCTGCAAGCATCATCATTGTT 58.906 40.909 0.00 0.00 0.00 2.83
1874 1975 3.329814 TCCTATCCTGCAAGCATCATCAT 59.670 43.478 0.00 0.00 0.00 2.45
1904 2005 2.823829 GCGTGATGGGCCGATCAAC 61.824 63.158 29.46 20.96 34.11 3.18
1919 2020 0.384974 CCGTAAACACAATTGCGCGT 60.385 50.000 8.43 0.00 37.13 6.01
1987 2088 9.102757 TGATCAATGCTTTATCTTGAGACTTAC 57.897 33.333 0.00 0.00 32.82 2.34
1988 2089 9.322773 CTGATCAATGCTTTATCTTGAGACTTA 57.677 33.333 0.00 0.00 32.82 2.24
2042 2143 5.586243 AGAAAATGTTGATACACAGGATCCG 59.414 40.000 5.98 3.99 37.03 4.18
2046 2147 6.295249 TGACAGAAAATGTTGATACACAGGA 58.705 36.000 0.00 0.00 44.17 3.86
2048 2149 7.194607 ACTGACAGAAAATGTTGATACACAG 57.805 36.000 10.08 0.00 44.17 3.66
2049 2150 8.556194 GTTACTGACAGAAAATGTTGATACACA 58.444 33.333 10.08 0.00 44.17 3.72
2165 4133 3.192422 CACCGTATTCAAAAGGCCATGAA 59.808 43.478 17.54 17.54 39.66 2.57
2189 4157 1.902508 AGTGGAGAGCAGGAAAATCGA 59.097 47.619 0.00 0.00 0.00 3.59
2248 4219 4.321601 GGCTAGATGAGTGATTGATAGCGT 60.322 45.833 0.00 0.00 36.00 5.07
2260 4231 3.693085 CAGCACAATTTGGCTAGATGAGT 59.307 43.478 10.69 0.00 38.56 3.41
2430 4409 2.773993 TTGGGTATGAAACGGACCTC 57.226 50.000 0.00 0.00 33.48 3.85
2546 4526 3.736433 CGAACAAATTTCCCTGTGTTGCA 60.736 43.478 0.00 0.00 34.44 4.08
2550 4530 4.340950 ACATTCGAACAAATTTCCCTGTGT 59.659 37.500 0.00 0.00 0.00 3.72
2567 4547 2.363788 TCTCCTCGGTTCAACATTCG 57.636 50.000 0.00 0.00 0.00 3.34
2580 4560 1.452108 CCCCGCCACAAATCTCCTC 60.452 63.158 0.00 0.00 0.00 3.71
2631 4611 0.030638 GCAGCGCTCCTTCAACAAAA 59.969 50.000 7.13 0.00 0.00 2.44
2671 4688 2.481952 GCATGGTTCGATTAGCAGGATC 59.518 50.000 5.24 0.00 29.51 3.36
2719 4736 1.227380 CACGGTGCTAGATCCAGCC 60.227 63.158 10.77 2.21 41.04 4.85
2733 4750 1.643292 CAGCCGATACATTGCACGG 59.357 57.895 6.80 6.80 46.74 4.94
2768 4798 7.380065 GAGTACAAAACTACTGAGACACTTCAG 59.620 40.741 0.00 1.70 43.50 3.02
2791 4821 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
2793 4823 8.639761 GCACTCTTATATTAGTTTACAGAGGGA 58.360 37.037 0.00 0.00 32.92 4.20
2794 4824 8.643324 AGCACTCTTATATTAGTTTACAGAGGG 58.357 37.037 0.00 0.00 34.08 4.30
2843 4873 9.305925 CCTCCGTAAACTAATATAAGAACGTTT 57.694 33.333 0.46 0.00 0.00 3.60
2844 4874 7.922811 CCCTCCGTAAACTAATATAAGAACGTT 59.077 37.037 0.00 0.00 0.00 3.99
2845 4875 7.285401 TCCCTCCGTAAACTAATATAAGAACGT 59.715 37.037 0.00 0.00 0.00 3.99
2846 4876 7.651808 TCCCTCCGTAAACTAATATAAGAACG 58.348 38.462 0.00 0.00 0.00 3.95
2847 4877 8.637099 ACTCCCTCCGTAAACTAATATAAGAAC 58.363 37.037 0.00 0.00 0.00 3.01
2848 4878 8.773033 ACTCCCTCCGTAAACTAATATAAGAA 57.227 34.615 0.00 0.00 0.00 2.52
2849 4879 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2850 4880 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
2851 4881 9.646522 AAGTACTCCCTCCGTAAACTAATATAA 57.353 33.333 0.00 0.00 0.00 0.98
2852 4882 9.071276 CAAGTACTCCCTCCGTAAACTAATATA 57.929 37.037 0.00 0.00 0.00 0.86
2853 4883 7.781693 TCAAGTACTCCCTCCGTAAACTAATAT 59.218 37.037 0.00 0.00 0.00 1.28
2854 4884 7.118723 TCAAGTACTCCCTCCGTAAACTAATA 58.881 38.462 0.00 0.00 0.00 0.98
2855 4885 5.954150 TCAAGTACTCCCTCCGTAAACTAAT 59.046 40.000 0.00 0.00 0.00 1.73
2856 4886 5.324409 TCAAGTACTCCCTCCGTAAACTAA 58.676 41.667 0.00 0.00 0.00 2.24
2857 4887 4.922206 TCAAGTACTCCCTCCGTAAACTA 58.078 43.478 0.00 0.00 0.00 2.24
2858 4888 3.771216 TCAAGTACTCCCTCCGTAAACT 58.229 45.455 0.00 0.00 0.00 2.66
2859 4889 4.401837 AGATCAAGTACTCCCTCCGTAAAC 59.598 45.833 0.00 0.00 0.00 2.01
2860 4890 4.607239 AGATCAAGTACTCCCTCCGTAAA 58.393 43.478 0.00 0.00 0.00 2.01
2861 4891 4.205587 GAGATCAAGTACTCCCTCCGTAA 58.794 47.826 0.00 0.00 0.00 3.18
2862 4892 3.434739 GGAGATCAAGTACTCCCTCCGTA 60.435 52.174 13.48 0.00 44.70 4.02
2863 4893 2.657143 GAGATCAAGTACTCCCTCCGT 58.343 52.381 0.00 0.00 0.00 4.69
2864 4894 1.957877 GGAGATCAAGTACTCCCTCCG 59.042 57.143 13.48 0.00 44.70 4.63
2870 4900 7.147983 ACACTTCACATAGGAGATCAAGTACTC 60.148 40.741 0.00 0.00 0.00 2.59
2871 4901 6.665680 ACACTTCACATAGGAGATCAAGTACT 59.334 38.462 0.00 0.00 0.00 2.73
2936 4976 7.594758 CCACACAACATAACCTAAAAGACAATG 59.405 37.037 0.00 0.00 0.00 2.82
2992 5032 5.385198 ACACAACAGGAAATAGGACAACAT 58.615 37.500 0.00 0.00 0.00 2.71
3020 5061 1.880027 AGCGAAAACGGCAAAGAGAAT 59.120 42.857 0.00 0.00 0.00 2.40
3053 5094 3.261580 CATGACGTCTAGCAATTCCACA 58.738 45.455 17.92 0.00 0.00 4.17
3066 5107 2.546195 AGTTACTCTCGCATGACGTC 57.454 50.000 9.11 9.11 44.19 4.34
3068 5109 6.344002 CGTTAATTAGTTACTCTCGCATGACG 60.344 42.308 0.00 0.00 45.62 4.35
3073 5114 5.032863 GCTCGTTAATTAGTTACTCTCGCA 58.967 41.667 0.00 0.00 0.00 5.10
3074 5115 4.144391 CGCTCGTTAATTAGTTACTCTCGC 59.856 45.833 0.00 0.00 0.00 5.03
3075 5116 4.144391 GCGCTCGTTAATTAGTTACTCTCG 59.856 45.833 0.00 0.00 0.00 4.04
3076 5117 5.272397 AGCGCTCGTTAATTAGTTACTCTC 58.728 41.667 2.64 0.00 0.00 3.20
3077 5118 5.066246 AGAGCGCTCGTTAATTAGTTACTCT 59.934 40.000 30.39 4.87 34.09 3.24
3078 5119 5.272397 AGAGCGCTCGTTAATTAGTTACTC 58.728 41.667 30.39 2.34 34.09 2.59
3079 5120 5.246145 AGAGCGCTCGTTAATTAGTTACT 57.754 39.130 30.39 5.98 34.09 2.24
3080 5121 5.945775 AAGAGCGCTCGTTAATTAGTTAC 57.054 39.130 30.39 3.16 34.09 2.50
3081 5122 6.183360 CCAAAAGAGCGCTCGTTAATTAGTTA 60.183 38.462 33.37 0.00 31.33 2.24
3082 5123 5.390567 CCAAAAGAGCGCTCGTTAATTAGTT 60.391 40.000 33.37 16.86 31.33 2.24
3083 5124 4.092968 CCAAAAGAGCGCTCGTTAATTAGT 59.907 41.667 33.37 17.52 31.33 2.24
3084 5125 4.494199 CCCAAAAGAGCGCTCGTTAATTAG 60.494 45.833 33.37 21.14 31.33 1.73
3085 5126 3.372822 CCCAAAAGAGCGCTCGTTAATTA 59.627 43.478 33.37 0.00 31.33 1.40
3086 5127 2.161609 CCCAAAAGAGCGCTCGTTAATT 59.838 45.455 33.37 19.31 31.33 1.40
3087 5128 1.737793 CCCAAAAGAGCGCTCGTTAAT 59.262 47.619 33.37 19.56 31.33 1.40
3088 5129 1.153353 CCCAAAAGAGCGCTCGTTAA 58.847 50.000 33.37 0.00 31.33 2.01
3089 5130 0.319083 TCCCAAAAGAGCGCTCGTTA 59.681 50.000 33.37 18.54 31.33 3.18
3090 5131 0.951040 CTCCCAAAAGAGCGCTCGTT 60.951 55.000 29.21 29.21 32.85 3.85
3091 5132 1.374758 CTCCCAAAAGAGCGCTCGT 60.375 57.895 30.39 25.69 34.09 4.18
3092 5133 3.479370 CTCCCAAAAGAGCGCTCG 58.521 61.111 30.39 16.69 34.09 5.03
3106 5147 0.842635 AGTGATCATTGGGAGGCTCC 59.157 55.000 25.80 25.80 35.23 4.70
3107 5148 2.295885 CAAGTGATCATTGGGAGGCTC 58.704 52.381 5.78 5.78 0.00 4.70
3108 5149 1.684248 GCAAGTGATCATTGGGAGGCT 60.684 52.381 15.25 0.00 0.00 4.58
3109 5150 0.743097 GCAAGTGATCATTGGGAGGC 59.257 55.000 15.25 4.25 0.00 4.70
3110 5151 1.019673 CGCAAGTGATCATTGGGAGG 58.980 55.000 20.32 2.60 41.64 4.30
3125 5166 1.070105 ACGTTCTTAGCCCACGCAA 59.930 52.632 0.00 0.00 37.44 4.85
3126 5167 1.666553 CACGTTCTTAGCCCACGCA 60.667 57.895 0.00 0.00 37.44 5.24
3127 5168 3.023591 GCACGTTCTTAGCCCACGC 62.024 63.158 0.00 0.00 37.44 5.34
3128 5169 2.388232 GGCACGTTCTTAGCCCACG 61.388 63.158 2.49 0.00 42.58 4.94
3129 5170 3.574780 GGCACGTTCTTAGCCCAC 58.425 61.111 2.49 0.00 42.58 4.61
3133 5174 1.461127 CTCAAGTGGCACGTTCTTAGC 59.539 52.381 12.71 0.00 0.00 3.09
3134 5175 2.731976 GTCTCAAGTGGCACGTTCTTAG 59.268 50.000 12.71 5.66 0.00 2.18
3135 5176 2.750948 GTCTCAAGTGGCACGTTCTTA 58.249 47.619 12.71 0.00 0.00 2.10
3136 5177 1.583054 GTCTCAAGTGGCACGTTCTT 58.417 50.000 12.71 0.00 0.00 2.52
3137 5178 0.597637 CGTCTCAAGTGGCACGTTCT 60.598 55.000 12.71 0.00 0.00 3.01
3138 5179 1.853319 CGTCTCAAGTGGCACGTTC 59.147 57.895 12.71 0.59 0.00 3.95
3139 5180 2.244651 GCGTCTCAAGTGGCACGTT 61.245 57.895 12.71 4.26 34.69 3.99
3140 5181 2.661866 GCGTCTCAAGTGGCACGT 60.662 61.111 12.71 6.02 34.69 4.49
3141 5182 2.356313 AGCGTCTCAAGTGGCACG 60.356 61.111 12.71 0.00 35.32 5.34
3142 5183 1.005630 AGAGCGTCTCAAGTGGCAC 60.006 57.895 10.29 10.29 32.06 5.01
3143 5184 1.290324 GAGAGCGTCTCAAGTGGCA 59.710 57.895 9.09 0.00 42.90 4.92
3144 5185 4.177229 GAGAGCGTCTCAAGTGGC 57.823 61.111 9.09 0.00 42.90 5.01
3152 5193 2.403378 GCGGAGACTGAGAGCGTCT 61.403 63.158 0.00 0.00 43.97 4.18
3153 5194 2.101380 GCGGAGACTGAGAGCGTC 59.899 66.667 0.00 0.00 0.00 5.19
3154 5195 3.444805 GGCGGAGACTGAGAGCGT 61.445 66.667 0.00 0.00 0.00 5.07
3155 5196 3.443925 TGGCGGAGACTGAGAGCG 61.444 66.667 0.00 0.00 34.59 5.03
3156 5197 2.183046 GTGGCGGAGACTGAGAGC 59.817 66.667 0.00 0.00 34.59 4.09
3157 5198 2.336478 ACGTGGCGGAGACTGAGAG 61.336 63.158 0.00 0.00 34.59 3.20
3158 5199 2.282251 ACGTGGCGGAGACTGAGA 60.282 61.111 0.00 0.00 34.59 3.27
3159 5200 2.126307 CACGTGGCGGAGACTGAG 60.126 66.667 7.95 0.00 34.59 3.35
3160 5201 2.023414 AAACACGTGGCGGAGACTGA 62.023 55.000 21.57 0.00 34.59 3.41
3161 5202 1.557443 GAAACACGTGGCGGAGACTG 61.557 60.000 21.57 0.00 34.59 3.51
3162 5203 1.300697 GAAACACGTGGCGGAGACT 60.301 57.895 21.57 0.00 34.59 3.24
3163 5204 2.654912 CGAAACACGTGGCGGAGAC 61.655 63.158 21.57 3.10 37.22 3.36
3164 5205 2.355363 CGAAACACGTGGCGGAGA 60.355 61.111 21.57 0.00 37.22 3.71
3165 5206 4.072088 GCGAAACACGTGGCGGAG 62.072 66.667 21.57 8.14 44.60 4.63
3166 5207 4.595538 AGCGAAACACGTGGCGGA 62.596 61.111 21.57 0.00 44.60 5.54
3167 5208 4.072088 GAGCGAAACACGTGGCGG 62.072 66.667 21.57 7.14 44.60 6.13
3168 5209 3.036084 AGAGCGAAACACGTGGCG 61.036 61.111 21.57 20.03 44.60 5.69
3169 5210 1.891060 CTCAGAGCGAAACACGTGGC 61.891 60.000 21.57 13.43 44.60 5.01
3170 5211 1.891060 GCTCAGAGCGAAACACGTGG 61.891 60.000 21.57 2.48 44.60 4.94
3171 5212 1.488957 GCTCAGAGCGAAACACGTG 59.511 57.895 15.48 15.48 44.60 4.49
3172 5213 3.938112 GCTCAGAGCGAAACACGT 58.062 55.556 6.67 0.00 44.60 4.49
3181 5222 1.083242 CCAGAGAAAGCGCTCAGAGC 61.083 60.000 12.06 12.94 37.37 4.09
3182 5223 0.529833 TCCAGAGAAAGCGCTCAGAG 59.470 55.000 12.06 0.00 37.37 3.35
3183 5224 1.189752 ATCCAGAGAAAGCGCTCAGA 58.810 50.000 12.06 0.00 37.37 3.27
3184 5225 2.021355 AATCCAGAGAAAGCGCTCAG 57.979 50.000 12.06 0.00 37.37 3.35
3185 5226 2.479566 AAATCCAGAGAAAGCGCTCA 57.520 45.000 12.06 0.00 37.37 4.26
3186 5227 3.839051 AAAAATCCAGAGAAAGCGCTC 57.161 42.857 12.06 0.00 35.11 5.03
3204 5245 5.659048 AACGCATGCGGAAAAATTAAAAA 57.341 30.435 39.95 0.00 44.69 1.94
3205 5246 5.659048 AAACGCATGCGGAAAAATTAAAA 57.341 30.435 39.95 0.00 44.69 1.52
3206 5247 5.610552 CGAAAACGCATGCGGAAAAATTAAA 60.611 36.000 39.95 0.00 44.69 1.52
3207 5248 4.143514 CGAAAACGCATGCGGAAAAATTAA 60.144 37.500 39.95 0.00 44.69 1.40
3208 5249 3.362237 CGAAAACGCATGCGGAAAAATTA 59.638 39.130 39.95 0.00 44.69 1.40
3209 5250 2.154772 CGAAAACGCATGCGGAAAAATT 59.845 40.909 39.95 23.26 44.69 1.82
3210 5251 1.718711 CGAAAACGCATGCGGAAAAAT 59.281 42.857 39.95 21.35 44.69 1.82
3211 5252 1.124462 CGAAAACGCATGCGGAAAAA 58.876 45.000 39.95 0.00 44.69 1.94
3212 5253 0.661780 CCGAAAACGCATGCGGAAAA 60.662 50.000 39.95 0.00 46.29 2.29
3213 5254 1.081774 CCGAAAACGCATGCGGAAA 60.082 52.632 39.95 0.00 46.29 3.13
3214 5255 2.558821 CCGAAAACGCATGCGGAA 59.441 55.556 39.95 0.00 46.29 4.30
3215 5256 4.096558 GCCGAAAACGCATGCGGA 62.097 61.111 39.95 0.00 46.29 5.54
3216 5257 3.609214 AAGCCGAAAACGCATGCGG 62.609 57.895 39.95 23.77 46.14 5.69
3217 5258 2.126888 AAGCCGAAAACGCATGCG 60.127 55.556 36.79 36.79 46.03 4.73
3218 5259 0.939106 AACAAGCCGAAAACGCATGC 60.939 50.000 7.91 7.91 0.00 4.06
3219 5260 2.095969 TCTAACAAGCCGAAAACGCATG 60.096 45.455 0.00 0.00 0.00 4.06
3220 5261 2.147958 TCTAACAAGCCGAAAACGCAT 58.852 42.857 0.00 0.00 0.00 4.73
3221 5262 1.584175 TCTAACAAGCCGAAAACGCA 58.416 45.000 0.00 0.00 0.00 5.24
3222 5263 2.095919 ACATCTAACAAGCCGAAAACGC 60.096 45.455 0.00 0.00 0.00 4.84
3223 5264 3.806316 ACATCTAACAAGCCGAAAACG 57.194 42.857 0.00 0.00 0.00 3.60
3224 5265 5.358298 AGAACATCTAACAAGCCGAAAAC 57.642 39.130 0.00 0.00 0.00 2.43
3225 5266 6.385649 AAAGAACATCTAACAAGCCGAAAA 57.614 33.333 0.00 0.00 0.00 2.29
3226 5267 6.385649 AAAAGAACATCTAACAAGCCGAAA 57.614 33.333 0.00 0.00 0.00 3.46
3227 5268 6.205784 CAAAAAGAACATCTAACAAGCCGAA 58.794 36.000 0.00 0.00 0.00 4.30
3228 5269 5.278266 CCAAAAAGAACATCTAACAAGCCGA 60.278 40.000 0.00 0.00 0.00 5.54
3229 5270 4.917415 CCAAAAAGAACATCTAACAAGCCG 59.083 41.667 0.00 0.00 0.00 5.52
3230 5271 4.686091 GCCAAAAAGAACATCTAACAAGCC 59.314 41.667 0.00 0.00 0.00 4.35
3231 5272 5.532557 AGCCAAAAAGAACATCTAACAAGC 58.467 37.500 0.00 0.00 0.00 4.01
3232 5273 7.169813 GGAAAGCCAAAAAGAACATCTAACAAG 59.830 37.037 0.00 0.00 0.00 3.16
3233 5274 6.983890 GGAAAGCCAAAAAGAACATCTAACAA 59.016 34.615 0.00 0.00 0.00 2.83
3234 5275 6.512297 GGAAAGCCAAAAAGAACATCTAACA 58.488 36.000 0.00 0.00 0.00 2.41
3235 5276 5.629435 CGGAAAGCCAAAAAGAACATCTAAC 59.371 40.000 0.00 0.00 0.00 2.34
3236 5277 5.278758 CCGGAAAGCCAAAAAGAACATCTAA 60.279 40.000 0.00 0.00 0.00 2.10
3237 5278 4.217550 CCGGAAAGCCAAAAAGAACATCTA 59.782 41.667 0.00 0.00 0.00 1.98
3238 5279 3.005791 CCGGAAAGCCAAAAAGAACATCT 59.994 43.478 0.00 0.00 0.00 2.90
3239 5280 3.243737 ACCGGAAAGCCAAAAAGAACATC 60.244 43.478 9.46 0.00 0.00 3.06
3240 5281 2.698274 ACCGGAAAGCCAAAAAGAACAT 59.302 40.909 9.46 0.00 0.00 2.71
3241 5282 2.104170 ACCGGAAAGCCAAAAAGAACA 58.896 42.857 9.46 0.00 0.00 3.18
3242 5283 2.882927 ACCGGAAAGCCAAAAAGAAC 57.117 45.000 9.46 0.00 0.00 3.01
3243 5284 3.897141 AAACCGGAAAGCCAAAAAGAA 57.103 38.095 9.46 0.00 0.00 2.52
3244 5285 3.897141 AAAACCGGAAAGCCAAAAAGA 57.103 38.095 9.46 0.00 0.00 2.52
3245 5286 3.935828 TGAAAAACCGGAAAGCCAAAAAG 59.064 39.130 9.46 0.00 0.00 2.27
3246 5287 3.685272 GTGAAAAACCGGAAAGCCAAAAA 59.315 39.130 9.46 0.00 0.00 1.94
3247 5288 3.263261 GTGAAAAACCGGAAAGCCAAAA 58.737 40.909 9.46 0.00 0.00 2.44
3248 5289 2.418884 GGTGAAAAACCGGAAAGCCAAA 60.419 45.455 9.46 0.00 39.81 3.28
3249 5290 1.137282 GGTGAAAAACCGGAAAGCCAA 59.863 47.619 9.46 0.00 39.81 4.52
3250 5291 0.747852 GGTGAAAAACCGGAAAGCCA 59.252 50.000 9.46 0.00 39.81 4.75
3251 5292 3.580904 GGTGAAAAACCGGAAAGCC 57.419 52.632 9.46 0.00 39.81 4.35
3293 5334 5.529430 TCGTGCCTCTCATGAAAGTTAAAAA 59.471 36.000 0.00 0.00 37.75 1.94
3294 5335 5.060506 TCGTGCCTCTCATGAAAGTTAAAA 58.939 37.500 0.00 0.00 37.75 1.52
3295 5336 4.637276 TCGTGCCTCTCATGAAAGTTAAA 58.363 39.130 0.00 0.00 37.75 1.52
3296 5337 4.265904 TCGTGCCTCTCATGAAAGTTAA 57.734 40.909 0.00 0.00 37.75 2.01
3297 5338 3.953712 TCGTGCCTCTCATGAAAGTTA 57.046 42.857 0.00 0.00 37.75 2.24
3298 5339 2.839486 TCGTGCCTCTCATGAAAGTT 57.161 45.000 0.00 0.00 37.75 2.66
3299 5340 3.340814 AATCGTGCCTCTCATGAAAGT 57.659 42.857 0.00 0.00 43.37 2.66
3300 5341 4.409570 CAAAATCGTGCCTCTCATGAAAG 58.590 43.478 0.00 0.00 43.37 2.62
3301 5342 3.366273 GCAAAATCGTGCCTCTCATGAAA 60.366 43.478 0.00 0.00 43.37 2.69
3302 5343 2.162208 GCAAAATCGTGCCTCTCATGAA 59.838 45.455 0.00 0.00 43.37 2.57
3303 5344 1.739466 GCAAAATCGTGCCTCTCATGA 59.261 47.619 0.00 0.00 44.18 3.07
3304 5345 1.741706 AGCAAAATCGTGCCTCTCATG 59.258 47.619 0.00 0.00 46.14 3.07
3305 5346 2.119801 AGCAAAATCGTGCCTCTCAT 57.880 45.000 0.00 0.00 46.14 2.90
3306 5347 1.896220 AAGCAAAATCGTGCCTCTCA 58.104 45.000 0.00 0.00 46.14 3.27
3307 5348 2.726066 CGAAAGCAAAATCGTGCCTCTC 60.726 50.000 0.00 0.00 46.14 3.20
3308 5349 1.197721 CGAAAGCAAAATCGTGCCTCT 59.802 47.619 0.00 0.00 46.14 3.69
3309 5350 1.606606 CGAAAGCAAAATCGTGCCTC 58.393 50.000 0.00 0.00 46.14 4.70
3310 5351 3.773117 CGAAAGCAAAATCGTGCCT 57.227 47.368 0.00 0.00 46.14 4.75
3337 5378 2.079020 TTTTCGAGAGACACGGCCGT 62.079 55.000 28.70 28.70 41.84 5.68
3338 5379 1.372499 TTTTCGAGAGACACGGCCG 60.372 57.895 26.86 26.86 41.84 6.13
3339 5380 2.151295 GTTTTCGAGAGACACGGCC 58.849 57.895 0.00 0.00 41.84 6.13
3362 5403 3.697045 TCACGGAAGCAAAGAAGGAAAAA 59.303 39.130 0.00 0.00 0.00 1.94
3363 5404 3.283751 TCACGGAAGCAAAGAAGGAAAA 58.716 40.909 0.00 0.00 0.00 2.29
3364 5405 2.925724 TCACGGAAGCAAAGAAGGAAA 58.074 42.857 0.00 0.00 0.00 3.13
3365 5406 2.631160 TCACGGAAGCAAAGAAGGAA 57.369 45.000 0.00 0.00 0.00 3.36
3366 5407 2.631160 TTCACGGAAGCAAAGAAGGA 57.369 45.000 0.00 0.00 0.00 3.36
3367 5408 2.030805 CCTTTCACGGAAGCAAAGAAGG 60.031 50.000 0.00 0.00 36.76 3.46
3368 5409 2.605580 GCCTTTCACGGAAGCAAAGAAG 60.606 50.000 0.00 0.00 36.76 2.85
3369 5410 1.336755 GCCTTTCACGGAAGCAAAGAA 59.663 47.619 0.00 0.00 36.76 2.52
3370 5411 0.951558 GCCTTTCACGGAAGCAAAGA 59.048 50.000 0.00 0.00 36.76 2.52
3371 5412 0.667993 TGCCTTTCACGGAAGCAAAG 59.332 50.000 0.00 0.00 35.26 2.77
3372 5413 0.383949 GTGCCTTTCACGGAAGCAAA 59.616 50.000 0.00 0.00 35.76 3.68
3373 5414 2.029743 GTGCCTTTCACGGAAGCAA 58.970 52.632 0.00 0.00 35.76 3.91
3374 5415 3.744559 GTGCCTTTCACGGAAGCA 58.255 55.556 0.00 0.00 35.76 3.91
3386 5427 1.878102 CGCAGAAGGTAAACTGTGCCT 60.878 52.381 0.00 0.00 45.84 4.75
3387 5428 0.517316 CGCAGAAGGTAAACTGTGCC 59.483 55.000 0.00 0.00 36.89 5.01
3388 5429 1.461127 CTCGCAGAAGGTAAACTGTGC 59.539 52.381 0.00 0.00 42.18 4.57
3389 5430 2.989840 CTCTCGCAGAAGGTAAACTGTG 59.010 50.000 0.00 0.00 43.30 3.66
3390 5431 2.028930 CCTCTCGCAGAAGGTAAACTGT 60.029 50.000 0.00 0.00 36.62 3.55
3391 5432 2.611518 CCTCTCGCAGAAGGTAAACTG 58.388 52.381 0.00 0.00 34.09 3.16
3392 5433 1.066787 GCCTCTCGCAGAAGGTAAACT 60.067 52.381 0.00 0.00 37.22 2.66
3393 5434 1.337823 TGCCTCTCGCAGAAGGTAAAC 60.338 52.381 0.00 0.00 44.64 2.01
3394 5435 0.973632 TGCCTCTCGCAGAAGGTAAA 59.026 50.000 0.00 0.00 44.64 2.01
3395 5436 2.666085 TGCCTCTCGCAGAAGGTAA 58.334 52.632 0.00 0.00 44.64 2.85
3396 5437 4.434483 TGCCTCTCGCAGAAGGTA 57.566 55.556 0.00 0.00 44.64 3.08
3422 5463 0.454620 CGAAAGACGTGTCCGAGAGG 60.455 60.000 0.00 0.00 44.94 3.69
3423 5464 0.454620 CCGAAAGACGTGTCCGAGAG 60.455 60.000 0.00 0.00 40.78 3.20
3424 5465 0.886043 TCCGAAAGACGTGTCCGAGA 60.886 55.000 0.00 0.00 40.78 4.04
3425 5466 0.039798 TTCCGAAAGACGTGTCCGAG 60.040 55.000 0.00 0.00 40.78 4.63
3426 5467 0.385029 TTTCCGAAAGACGTGTCCGA 59.615 50.000 0.00 0.00 40.78 4.55
3427 5468 0.782384 CTTTCCGAAAGACGTGTCCG 59.218 55.000 14.72 0.00 41.02 4.79
3428 5469 1.145803 CCTTTCCGAAAGACGTGTCC 58.854 55.000 20.43 0.00 41.02 4.02
3429 5470 2.144482 TCCTTTCCGAAAGACGTGTC 57.856 50.000 20.43 0.00 41.02 3.67
3430 5471 2.607631 TTCCTTTCCGAAAGACGTGT 57.392 45.000 20.43 0.00 41.02 4.49
3431 5472 3.955771 TTTTCCTTTCCGAAAGACGTG 57.044 42.857 20.43 5.65 41.02 4.49
3450 5491 4.729227 AACGAACTGGGAACATGTTTTT 57.271 36.364 13.36 1.63 41.51 1.94
3451 5492 4.729227 AAACGAACTGGGAACATGTTTT 57.271 36.364 13.36 2.03 41.51 2.43
3452 5493 4.729227 AAAACGAACTGGGAACATGTTT 57.271 36.364 13.36 0.00 41.51 2.83
3453 5494 4.729227 AAAAACGAACTGGGAACATGTT 57.271 36.364 11.78 11.78 41.51 2.71
3492 5533 3.949113 TGGTAGGCTTTGACGAACTTTTT 59.051 39.130 0.00 0.00 0.00 1.94
3493 5534 3.547746 TGGTAGGCTTTGACGAACTTTT 58.452 40.909 0.00 0.00 0.00 2.27
3494 5535 3.202829 TGGTAGGCTTTGACGAACTTT 57.797 42.857 0.00 0.00 0.00 2.66
3495 5536 2.876550 GTTGGTAGGCTTTGACGAACTT 59.123 45.455 0.00 0.00 33.14 2.66
3496 5537 2.158871 TGTTGGTAGGCTTTGACGAACT 60.159 45.455 12.83 0.00 35.87 3.01
3497 5538 2.215196 TGTTGGTAGGCTTTGACGAAC 58.785 47.619 6.79 6.79 35.54 3.95
3498 5539 2.623878 TGTTGGTAGGCTTTGACGAA 57.376 45.000 0.00 0.00 0.00 3.85
3499 5540 2.422597 CATGTTGGTAGGCTTTGACGA 58.577 47.619 0.00 0.00 0.00 4.20
3500 5541 1.468520 CCATGTTGGTAGGCTTTGACG 59.531 52.381 0.00 0.00 31.35 4.35
3501 5542 1.818674 CCCATGTTGGTAGGCTTTGAC 59.181 52.381 0.00 0.00 35.17 3.18
3502 5543 1.707989 TCCCATGTTGGTAGGCTTTGA 59.292 47.619 0.00 0.00 35.17 2.69
3503 5544 2.214376 TCCCATGTTGGTAGGCTTTG 57.786 50.000 0.00 0.00 35.17 2.77
3504 5545 2.582636 AGATCCCATGTTGGTAGGCTTT 59.417 45.455 0.00 0.00 35.17 3.51
3505 5546 2.208872 AGATCCCATGTTGGTAGGCTT 58.791 47.619 0.00 0.00 35.17 4.35
3506 5547 1.898863 AGATCCCATGTTGGTAGGCT 58.101 50.000 0.00 0.00 35.17 4.58
3507 5548 2.706190 ACTAGATCCCATGTTGGTAGGC 59.294 50.000 0.00 0.00 35.17 3.93
3508 5549 5.373812 AAACTAGATCCCATGTTGGTAGG 57.626 43.478 0.00 0.00 35.17 3.18
3509 5550 6.414732 TCAAAACTAGATCCCATGTTGGTAG 58.585 40.000 0.00 0.00 35.17 3.18
3510 5551 6.381498 TCAAAACTAGATCCCATGTTGGTA 57.619 37.500 0.00 0.00 35.17 3.25
3511 5552 5.255397 TCAAAACTAGATCCCATGTTGGT 57.745 39.130 0.00 0.00 35.17 3.67
3512 5553 5.945784 TCTTCAAAACTAGATCCCATGTTGG 59.054 40.000 0.00 0.00 37.25 3.77
3513 5554 7.555554 AGATCTTCAAAACTAGATCCCATGTTG 59.444 37.037 0.00 0.00 38.24 3.33
3514 5555 7.637511 AGATCTTCAAAACTAGATCCCATGTT 58.362 34.615 0.00 0.00 38.24 2.71
3515 5556 7.092712 TGAGATCTTCAAAACTAGATCCCATGT 60.093 37.037 0.00 0.00 38.24 3.21
3516 5557 7.278135 TGAGATCTTCAAAACTAGATCCCATG 58.722 38.462 0.00 0.00 38.24 3.66
3517 5558 7.443302 TGAGATCTTCAAAACTAGATCCCAT 57.557 36.000 0.00 0.00 38.24 4.00
3518 5559 6.874278 TGAGATCTTCAAAACTAGATCCCA 57.126 37.500 0.00 1.25 38.24 4.37
3519 5560 6.256757 CGTTGAGATCTTCAAAACTAGATCCC 59.743 42.308 0.00 0.00 46.85 3.85
3520 5561 6.237969 GCGTTGAGATCTTCAAAACTAGATCC 60.238 42.308 0.00 2.51 46.85 3.36
3521 5562 6.507141 CGCGTTGAGATCTTCAAAACTAGATC 60.507 42.308 0.00 0.00 46.85 2.75
3522 5563 5.289675 CGCGTTGAGATCTTCAAAACTAGAT 59.710 40.000 0.00 0.00 46.85 1.98
3523 5564 4.621460 CGCGTTGAGATCTTCAAAACTAGA 59.379 41.667 0.00 0.00 46.85 2.43
3524 5565 4.621460 TCGCGTTGAGATCTTCAAAACTAG 59.379 41.667 5.77 0.00 46.85 2.57
3525 5566 4.552355 TCGCGTTGAGATCTTCAAAACTA 58.448 39.130 5.77 0.00 46.85 2.24
3526 5567 3.390135 TCGCGTTGAGATCTTCAAAACT 58.610 40.909 5.77 0.00 46.85 2.66
3527 5568 3.788434 TCGCGTTGAGATCTTCAAAAC 57.212 42.857 5.77 0.00 46.85 2.43
3538 5579 2.069273 AGTTGGATTTCTCGCGTTGAG 58.931 47.619 5.77 0.00 46.72 3.02
3539 5580 1.798223 CAGTTGGATTTCTCGCGTTGA 59.202 47.619 5.77 2.87 0.00 3.18
3540 5581 1.531149 ACAGTTGGATTTCTCGCGTTG 59.469 47.619 5.77 0.00 0.00 4.10
3541 5582 1.531149 CACAGTTGGATTTCTCGCGTT 59.469 47.619 5.77 0.00 0.00 4.84
3542 5583 1.148310 CACAGTTGGATTTCTCGCGT 58.852 50.000 5.77 0.00 0.00 6.01
3543 5584 1.428448 TCACAGTTGGATTTCTCGCG 58.572 50.000 0.00 0.00 0.00 5.87
3544 5585 3.896648 TTTCACAGTTGGATTTCTCGC 57.103 42.857 0.00 0.00 0.00 5.03
3545 5586 5.156355 CCATTTTCACAGTTGGATTTCTCG 58.844 41.667 0.00 0.00 0.00 4.04
3546 5587 6.089249 ACCATTTTCACAGTTGGATTTCTC 57.911 37.500 0.00 0.00 33.36 2.87
3547 5588 6.484364 AACCATTTTCACAGTTGGATTTCT 57.516 33.333 0.00 0.00 33.36 2.52
3548 5589 8.655651 TTAAACCATTTTCACAGTTGGATTTC 57.344 30.769 0.00 0.00 33.36 2.17
3549 5590 8.482128 TCTTAAACCATTTTCACAGTTGGATTT 58.518 29.630 0.00 0.00 33.36 2.17
3550 5591 8.017418 TCTTAAACCATTTTCACAGTTGGATT 57.983 30.769 0.00 0.00 33.36 3.01
3551 5592 7.595819 TCTTAAACCATTTTCACAGTTGGAT 57.404 32.000 0.00 0.00 33.36 3.41
3552 5593 7.595819 ATCTTAAACCATTTTCACAGTTGGA 57.404 32.000 0.00 0.00 33.36 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.