Multiple sequence alignment - TraesCS6D01G332900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G332900 chr6D 100.000 2782 0 0 1 2782 435350117 435352898 0.000000e+00 5138.0
1 TraesCS6D01G332900 chr6D 93.692 428 18 7 28 450 105556807 105557230 1.410000e-177 632.0
2 TraesCS6D01G332900 chr6D 92.523 428 26 5 28 453 268069638 268069215 2.370000e-170 608.0
3 TraesCS6D01G332900 chr6D 83.403 476 33 21 999 1434 435963240 435962771 1.550000e-107 399.0
4 TraesCS6D01G332900 chr6D 77.195 820 91 54 720 1482 435763551 435764331 9.340000e-105 390.0
5 TraesCS6D01G332900 chr6D 78.153 563 71 39 680 1229 435711443 435711966 7.480000e-81 311.0
6 TraesCS6D01G332900 chr6D 81.571 331 36 17 1102 1410 435832218 435831891 1.650000e-62 250.0
7 TraesCS6D01G332900 chr6D 89.655 174 14 3 1264 1434 435712034 435712206 4.670000e-53 219.0
8 TraesCS6D01G332900 chr6D 92.908 141 7 2 1470 1610 435351499 435351636 4.700000e-48 202.0
9 TraesCS6D01G332900 chr6D 92.908 141 7 2 1383 1520 435351586 435351726 4.700000e-48 202.0
10 TraesCS6D01G332900 chr6D 77.846 325 29 25 1567 1886 435962814 435962528 7.970000e-36 161.0
11 TraesCS6D01G332900 chr6D 76.945 347 39 23 1561 1905 435712154 435712461 2.870000e-35 159.0
12 TraesCS6D01G332900 chr6D 78.041 296 33 23 1561 1854 435750239 435750504 1.030000e-34 158.0
13 TraesCS6D01G332900 chr6D 92.647 68 4 1 1717 1784 435764324 435764390 2.280000e-16 97.1
14 TraesCS6D01G332900 chr6D 92.683 41 3 0 887 927 435963340 435963300 2.990000e-05 60.2
15 TraesCS6D01G332900 chr6B 90.973 1717 102 28 459 2136 658402499 658404201 0.000000e+00 2263.0
16 TraesCS6D01G332900 chr6B 78.426 788 90 48 684 1434 658477131 658477875 9.150000e-120 440.0
17 TraesCS6D01G332900 chr6B 78.426 788 90 48 684 1434 658495916 658496660 9.150000e-120 440.0
18 TraesCS6D01G332900 chr6B 78.426 788 90 48 684 1434 658515067 658515811 9.150000e-120 440.0
19 TraesCS6D01G332900 chr6B 77.193 855 97 54 680 1474 658530322 658531138 2.580000e-110 409.0
20 TraesCS6D01G332900 chr6B 83.613 476 31 21 999 1436 658578430 658577964 1.200000e-108 403.0
21 TraesCS6D01G332900 chr6B 90.860 186 14 1 1425 1610 658403453 658403635 2.140000e-61 246.0
22 TraesCS6D01G332900 chr6B 89.474 190 16 2 1383 1569 658403495 658403683 1.290000e-58 237.0
23 TraesCS6D01G332900 chr6B 91.837 147 8 2 1383 1526 658403540 658403685 4.700000e-48 202.0
24 TraesCS6D01G332900 chr6B 82.716 243 18 11 1470 1691 658403453 658403692 7.860000e-46 195.0
25 TraesCS6D01G332900 chr6B 76.369 347 41 25 1561 1905 658477823 658478130 6.210000e-32 148.0
26 TraesCS6D01G332900 chr6B 76.369 347 41 25 1561 1905 658496608 658496915 6.210000e-32 148.0
27 TraesCS6D01G332900 chr6B 76.730 318 32 23 1567 1880 658578009 658577730 3.740000e-29 139.0
28 TraesCS6D01G332900 chr6A 93.969 1028 40 7 1097 2115 582264880 582265894 0.000000e+00 1535.0
29 TraesCS6D01G332900 chr6A 93.682 459 18 6 633 1081 582264437 582264894 0.000000e+00 676.0
30 TraesCS6D01G332900 chr6A 86.082 388 33 11 2204 2586 582265909 582266280 5.580000e-107 398.0
31 TraesCS6D01G332900 chr6A 78.296 622 73 40 857 1434 582511216 582511819 7.380000e-91 344.0
32 TraesCS6D01G332900 chr6A 75.285 789 112 49 679 1410 582639146 582638384 1.620000e-77 300.0
33 TraesCS6D01G332900 chr6A 94.118 170 9 1 1265 1434 582920869 582920701 9.890000e-65 257.0
34 TraesCS6D01G332900 chr6A 93.103 145 6 3 1383 1524 582265260 582265403 2.810000e-50 209.0
35 TraesCS6D01G332900 chr6A 93.617 141 6 3 1470 1610 582265173 582265310 1.010000e-49 207.0
36 TraesCS6D01G332900 chr6A 94.495 109 6 0 530 638 582263662 582263770 4.770000e-38 169.0
37 TraesCS6D01G332900 chr6A 90.598 117 7 2 2669 2782 582266338 582266453 4.800000e-33 152.0
38 TraesCS6D01G332900 chr6A 79.452 219 18 16 1569 1784 582630943 582630749 2.250000e-26 130.0
39 TraesCS6D01G332900 chr6A 76.266 316 28 23 1567 1880 582920744 582920474 1.050000e-24 124.0
40 TraesCS6D01G332900 chr6A 76.159 302 33 21 1561 1855 582511767 582512036 3.760000e-24 122.0
41 TraesCS6D01G332900 chr6A 93.506 77 4 1 2592 2668 582266327 582266402 2.260000e-21 113.0
42 TraesCS6D01G332900 chr6A 81.250 144 13 7 879 1017 581982808 581982942 1.360000e-18 104.0
43 TraesCS6D01G332900 chr6A 81.250 144 13 7 879 1017 582086398 582086532 1.360000e-18 104.0
44 TraesCS6D01G332900 chr6A 87.097 62 6 2 1422 1481 582265415 582265476 4.970000e-08 69.4
45 TraesCS6D01G332900 chr3D 93.304 448 18 11 20 460 33351981 33352423 0.000000e+00 651.0
46 TraesCS6D01G332900 chr3D 95.364 151 7 0 528 678 608396091 608395941 9.960000e-60 241.0
47 TraesCS6D01G332900 chr5A 93.135 437 18 10 28 460 227141587 227141159 5.060000e-177 630.0
48 TraesCS6D01G332900 chr5A 92.958 426 22 6 28 450 522103215 522102795 5.090000e-172 614.0
49 TraesCS6D01G332900 chr7A 93.427 426 21 6 28 450 579171590 579171169 2.350000e-175 625.0
50 TraesCS6D01G332900 chr2D 91.928 446 26 8 24 466 641973177 641973615 1.420000e-172 616.0
51 TraesCS6D01G332900 chr5D 91.441 444 28 9 22 460 389527144 389527582 3.960000e-168 601.0
52 TraesCS6D01G332900 chr4A 91.724 435 29 6 24 455 13062412 13061982 5.130000e-167 597.0
53 TraesCS6D01G332900 chr4A 100.000 29 0 0 2509 2537 66030576 66030548 1.000000e-03 54.7
54 TraesCS6D01G332900 chrUn 78.426 788 90 49 684 1434 389578036 389577292 9.150000e-120 440.0
55 TraesCS6D01G332900 chrUn 78.426 788 90 49 684 1434 465805808 465805064 9.150000e-120 440.0
56 TraesCS6D01G332900 chr1B 92.308 39 3 0 2516 2554 91548318 91548280 3.870000e-04 56.5
57 TraesCS6D01G332900 chr1A 88.889 45 5 0 2516 2560 54346232 54346188 3.870000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G332900 chr6D 435350117 435352898 2781 False 1847.333333 5138 95.272000 1 2782 3 chr6D.!!$F3 2781
1 TraesCS6D01G332900 chr6D 435763551 435764390 839 False 243.550000 390 84.921000 720 1784 2 chr6D.!!$F5 1064
2 TraesCS6D01G332900 chr6D 435711443 435712461 1018 False 229.666667 311 81.584333 680 1905 3 chr6D.!!$F4 1225
3 TraesCS6D01G332900 chr6D 435962528 435963340 812 True 206.733333 399 84.644000 887 1886 3 chr6D.!!$R3 999
4 TraesCS6D01G332900 chr6B 658402499 658404201 1702 False 628.600000 2263 89.172000 459 2136 5 chr6B.!!$F3 1677
5 TraesCS6D01G332900 chr6B 658515067 658515811 744 False 440.000000 440 78.426000 684 1434 1 chr6B.!!$F1 750
6 TraesCS6D01G332900 chr6B 658530322 658531138 816 False 409.000000 409 77.193000 680 1474 1 chr6B.!!$F2 794
7 TraesCS6D01G332900 chr6B 658477131 658478130 999 False 294.000000 440 77.397500 684 1905 2 chr6B.!!$F4 1221
8 TraesCS6D01G332900 chr6B 658495916 658496915 999 False 294.000000 440 77.397500 684 1905 2 chr6B.!!$F5 1221
9 TraesCS6D01G332900 chr6B 658577730 658578430 700 True 271.000000 403 80.171500 999 1880 2 chr6B.!!$R1 881
10 TraesCS6D01G332900 chr6A 582263662 582266453 2791 False 392.044444 1535 91.794333 530 2782 9 chr6A.!!$F3 2252
11 TraesCS6D01G332900 chr6A 582638384 582639146 762 True 300.000000 300 75.285000 679 1410 1 chr6A.!!$R2 731
12 TraesCS6D01G332900 chr6A 582511216 582512036 820 False 233.000000 344 77.227500 857 1855 2 chr6A.!!$F4 998
13 TraesCS6D01G332900 chrUn 389577292 389578036 744 True 440.000000 440 78.426000 684 1434 1 chrUn.!!$R1 750
14 TraesCS6D01G332900 chrUn 465805064 465805808 744 True 440.000000 440 78.426000 684 1434 1 chrUn.!!$R2 750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.306533 CGCGCGCACCCTTTATAAAT 59.693 50.0 32.61 0.0 0.0 1.40 F
442 443 0.317770 CGCGCACCATGTTCACTTTT 60.318 50.0 8.75 0.0 0.0 2.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1446 2358 1.300963 CCATCCCAGTGTGACCCTG 59.699 63.158 0.0 0.0 0.0 4.45 R
2197 3130 0.321564 TCATCACAAGGCCGGTTCTG 60.322 55.000 1.9 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.997545 ATGAGTCCTACGTACTCCCTAT 57.002 45.455 13.10 0.00 42.24 2.57
22 23 4.785346 TGAGTCCTACGTACTCCCTATT 57.215 45.455 13.10 0.00 42.24 1.73
23 24 5.121380 TGAGTCCTACGTACTCCCTATTT 57.879 43.478 13.10 0.00 42.24 1.40
24 25 5.513233 TGAGTCCTACGTACTCCCTATTTT 58.487 41.667 13.10 0.00 42.24 1.82
25 26 6.662755 TGAGTCCTACGTACTCCCTATTTTA 58.337 40.000 13.10 0.00 42.24 1.52
26 27 7.293073 TGAGTCCTACGTACTCCCTATTTTAT 58.707 38.462 13.10 0.00 42.24 1.40
27 28 7.230108 TGAGTCCTACGTACTCCCTATTTTATG 59.770 40.741 13.10 0.00 42.24 1.90
28 29 6.492772 AGTCCTACGTACTCCCTATTTTATGG 59.507 42.308 0.00 0.00 0.00 2.74
29 30 6.491403 GTCCTACGTACTCCCTATTTTATGGA 59.509 42.308 0.00 0.00 0.00 3.41
30 31 6.491403 TCCTACGTACTCCCTATTTTATGGAC 59.509 42.308 0.00 0.00 0.00 4.02
31 32 5.192327 ACGTACTCCCTATTTTATGGACG 57.808 43.478 0.00 0.00 0.00 4.79
32 33 3.985925 CGTACTCCCTATTTTATGGACGC 59.014 47.826 0.00 0.00 0.00 5.19
33 34 3.107642 ACTCCCTATTTTATGGACGCG 57.892 47.619 3.53 3.53 0.00 6.01
34 35 2.224209 ACTCCCTATTTTATGGACGCGG 60.224 50.000 12.47 0.00 0.00 6.46
35 36 2.036733 CTCCCTATTTTATGGACGCGGA 59.963 50.000 12.47 0.00 0.00 5.54
36 37 2.635915 TCCCTATTTTATGGACGCGGAT 59.364 45.455 12.47 1.42 0.00 4.18
37 38 3.071892 TCCCTATTTTATGGACGCGGATT 59.928 43.478 12.47 0.00 0.00 3.01
38 39 3.818773 CCCTATTTTATGGACGCGGATTT 59.181 43.478 12.47 0.00 0.00 2.17
39 40 4.320202 CCCTATTTTATGGACGCGGATTTG 60.320 45.833 12.47 0.00 0.00 2.32
40 41 3.708563 ATTTTATGGACGCGGATTTGG 57.291 42.857 12.47 0.00 0.00 3.28
41 42 2.116827 TTTATGGACGCGGATTTGGT 57.883 45.000 12.47 0.00 0.00 3.67
42 43 1.374560 TTATGGACGCGGATTTGGTG 58.625 50.000 12.47 0.00 0.00 4.17
43 44 0.537653 TATGGACGCGGATTTGGTGA 59.462 50.000 12.47 0.00 0.00 4.02
44 45 0.322098 ATGGACGCGGATTTGGTGAA 60.322 50.000 12.47 0.00 0.00 3.18
45 46 0.322098 TGGACGCGGATTTGGTGAAT 60.322 50.000 12.47 0.00 0.00 2.57
46 47 1.066071 TGGACGCGGATTTGGTGAATA 60.066 47.619 12.47 0.00 0.00 1.75
47 48 2.218603 GGACGCGGATTTGGTGAATAT 58.781 47.619 12.47 0.00 0.00 1.28
48 49 2.032030 GGACGCGGATTTGGTGAATATG 60.032 50.000 12.47 0.00 0.00 1.78
49 50 1.946768 ACGCGGATTTGGTGAATATGG 59.053 47.619 12.47 0.00 0.00 2.74
50 51 1.266718 CGCGGATTTGGTGAATATGGG 59.733 52.381 0.00 0.00 0.00 4.00
51 52 2.306847 GCGGATTTGGTGAATATGGGT 58.693 47.619 0.00 0.00 0.00 4.51
52 53 2.034558 GCGGATTTGGTGAATATGGGTG 59.965 50.000 0.00 0.00 0.00 4.61
53 54 2.034558 CGGATTTGGTGAATATGGGTGC 59.965 50.000 0.00 0.00 0.00 5.01
54 55 2.034558 GGATTTGGTGAATATGGGTGCG 59.965 50.000 0.00 0.00 0.00 5.34
55 56 0.814457 TTTGGTGAATATGGGTGCGC 59.186 50.000 0.00 0.00 0.00 6.09
56 57 1.372838 TTGGTGAATATGGGTGCGCG 61.373 55.000 0.00 0.00 0.00 6.86
57 58 2.327940 GTGAATATGGGTGCGCGC 59.672 61.111 27.26 27.26 0.00 6.86
58 59 3.268603 TGAATATGGGTGCGCGCG 61.269 61.111 28.44 28.44 0.00 6.86
59 60 4.666532 GAATATGGGTGCGCGCGC 62.667 66.667 45.02 45.02 42.35 6.86
69 70 3.266376 GCGCGCGCACCCTTTATA 61.266 61.111 46.11 0.00 41.49 0.98
70 71 2.815298 GCGCGCGCACCCTTTATAA 61.815 57.895 46.11 0.00 41.49 0.98
71 72 1.716760 CGCGCGCACCCTTTATAAA 59.283 52.632 32.61 0.00 0.00 1.40
72 73 0.306533 CGCGCGCACCCTTTATAAAT 59.693 50.000 32.61 0.00 0.00 1.40
73 74 1.527736 CGCGCGCACCCTTTATAAATA 59.472 47.619 32.61 0.00 0.00 1.40
74 75 2.411031 CGCGCGCACCCTTTATAAATAG 60.411 50.000 32.61 4.31 0.00 1.73
75 76 2.546789 GCGCGCACCCTTTATAAATAGT 59.453 45.455 29.10 0.00 0.00 2.12
76 77 3.742369 GCGCGCACCCTTTATAAATAGTA 59.258 43.478 29.10 0.00 0.00 1.82
77 78 4.211794 GCGCGCACCCTTTATAAATAGTAA 59.788 41.667 29.10 0.00 0.00 2.24
78 79 5.277442 GCGCGCACCCTTTATAAATAGTAAA 60.277 40.000 29.10 0.00 0.00 2.01
79 80 6.567132 GCGCGCACCCTTTATAAATAGTAAAT 60.567 38.462 29.10 0.00 0.00 1.40
80 81 7.357303 CGCGCACCCTTTATAAATAGTAAATT 58.643 34.615 8.75 0.00 0.00 1.82
81 82 7.532884 CGCGCACCCTTTATAAATAGTAAATTC 59.467 37.037 8.75 0.00 0.00 2.17
82 83 8.347035 GCGCACCCTTTATAAATAGTAAATTCA 58.653 33.333 0.30 0.00 0.00 2.57
156 157 4.553323 ACATAATCAACCGGTATACTCGC 58.447 43.478 8.00 0.00 0.00 5.03
157 158 4.038282 ACATAATCAACCGGTATACTCGCA 59.962 41.667 8.00 0.00 0.00 5.10
158 159 3.746045 AATCAACCGGTATACTCGCAT 57.254 42.857 8.00 0.00 0.00 4.73
159 160 4.859304 AATCAACCGGTATACTCGCATA 57.141 40.909 8.00 0.00 0.00 3.14
160 161 5.401531 AATCAACCGGTATACTCGCATAT 57.598 39.130 8.00 0.00 0.00 1.78
161 162 4.168922 TCAACCGGTATACTCGCATATG 57.831 45.455 8.00 0.00 0.00 1.78
162 163 3.822167 TCAACCGGTATACTCGCATATGA 59.178 43.478 8.00 0.00 0.00 2.15
163 164 4.278919 TCAACCGGTATACTCGCATATGAA 59.721 41.667 8.00 0.00 0.00 2.57
164 165 4.436242 ACCGGTATACTCGCATATGAAG 57.564 45.455 4.49 5.46 0.00 3.02
165 166 3.825014 ACCGGTATACTCGCATATGAAGT 59.175 43.478 4.49 11.22 0.00 3.01
166 167 4.280174 ACCGGTATACTCGCATATGAAGTT 59.720 41.667 4.49 3.51 0.00 2.66
167 168 5.221382 ACCGGTATACTCGCATATGAAGTTT 60.221 40.000 4.49 6.85 0.00 2.66
168 169 5.345202 CCGGTATACTCGCATATGAAGTTTC 59.655 44.000 6.97 3.70 0.00 2.78
169 170 5.918576 CGGTATACTCGCATATGAAGTTTCA 59.081 40.000 6.97 0.00 42.14 2.69
170 171 6.129168 CGGTATACTCGCATATGAAGTTTCAC 60.129 42.308 6.97 7.42 40.49 3.18
171 172 5.890110 ATACTCGCATATGAAGTTTCACG 57.110 39.130 6.97 0.00 40.49 4.35
172 173 3.845178 ACTCGCATATGAAGTTTCACGA 58.155 40.909 6.97 2.35 40.49 4.35
173 174 4.242475 ACTCGCATATGAAGTTTCACGAA 58.758 39.130 6.97 0.00 40.49 3.85
174 175 4.327357 ACTCGCATATGAAGTTTCACGAAG 59.673 41.667 6.97 1.12 40.49 3.79
175 176 4.490743 TCGCATATGAAGTTTCACGAAGA 58.509 39.130 6.97 0.00 40.49 2.87
176 177 4.926832 TCGCATATGAAGTTTCACGAAGAA 59.073 37.500 6.97 0.00 40.49 2.52
177 178 5.407084 TCGCATATGAAGTTTCACGAAGAAA 59.593 36.000 6.97 0.00 43.71 2.52
188 189 5.966636 TTCACGAAGAAATCATATCCGTG 57.033 39.130 0.00 0.00 44.71 4.94
189 190 4.368315 TCACGAAGAAATCATATCCGTGG 58.632 43.478 0.00 0.00 43.87 4.94
190 191 4.119862 CACGAAGAAATCATATCCGTGGT 58.880 43.478 0.00 0.00 41.19 4.16
191 192 5.068067 TCACGAAGAAATCATATCCGTGGTA 59.932 40.000 0.00 0.00 43.87 3.25
192 193 5.751509 CACGAAGAAATCATATCCGTGGTAA 59.248 40.000 0.00 0.00 41.19 2.85
193 194 6.423905 CACGAAGAAATCATATCCGTGGTAAT 59.576 38.462 0.00 0.00 41.19 1.89
194 195 6.645415 ACGAAGAAATCATATCCGTGGTAATC 59.355 38.462 0.00 0.00 0.00 1.75
195 196 6.868864 CGAAGAAATCATATCCGTGGTAATCT 59.131 38.462 0.00 0.00 0.00 2.40
196 197 7.148738 CGAAGAAATCATATCCGTGGTAATCTG 60.149 40.741 0.00 0.00 0.00 2.90
197 198 6.467677 AGAAATCATATCCGTGGTAATCTGG 58.532 40.000 0.00 0.00 0.00 3.86
198 199 4.826274 ATCATATCCGTGGTAATCTGGG 57.174 45.455 0.00 0.00 0.00 4.45
199 200 2.301870 TCATATCCGTGGTAATCTGGGC 59.698 50.000 0.00 0.00 0.00 5.36
200 201 1.796017 TATCCGTGGTAATCTGGGCA 58.204 50.000 0.00 0.00 0.00 5.36
201 202 0.916086 ATCCGTGGTAATCTGGGCAA 59.084 50.000 0.00 0.00 0.00 4.52
202 203 0.693622 TCCGTGGTAATCTGGGCAAA 59.306 50.000 0.00 0.00 0.00 3.68
203 204 1.074084 TCCGTGGTAATCTGGGCAAAA 59.926 47.619 0.00 0.00 0.00 2.44
204 205 1.889829 CCGTGGTAATCTGGGCAAAAA 59.110 47.619 0.00 0.00 0.00 1.94
205 206 2.495669 CCGTGGTAATCTGGGCAAAAAT 59.504 45.455 0.00 0.00 0.00 1.82
206 207 3.510719 CGTGGTAATCTGGGCAAAAATG 58.489 45.455 0.00 0.00 0.00 2.32
207 208 3.192422 CGTGGTAATCTGGGCAAAAATGA 59.808 43.478 0.00 0.00 0.00 2.57
208 209 4.142182 CGTGGTAATCTGGGCAAAAATGAT 60.142 41.667 0.00 0.00 0.00 2.45
209 210 5.067153 CGTGGTAATCTGGGCAAAAATGATA 59.933 40.000 0.00 0.00 0.00 2.15
210 211 6.405286 CGTGGTAATCTGGGCAAAAATGATAA 60.405 38.462 0.00 0.00 0.00 1.75
211 212 7.327214 GTGGTAATCTGGGCAAAAATGATAAA 58.673 34.615 0.00 0.00 0.00 1.40
212 213 7.821846 GTGGTAATCTGGGCAAAAATGATAAAA 59.178 33.333 0.00 0.00 0.00 1.52
213 214 8.547173 TGGTAATCTGGGCAAAAATGATAAAAT 58.453 29.630 0.00 0.00 0.00 1.82
214 215 9.045223 GGTAATCTGGGCAAAAATGATAAAATC 57.955 33.333 0.00 0.00 0.00 2.17
215 216 7.775397 AATCTGGGCAAAAATGATAAAATCG 57.225 32.000 0.00 0.00 0.00 3.34
216 217 6.522625 TCTGGGCAAAAATGATAAAATCGA 57.477 33.333 0.00 0.00 0.00 3.59
217 218 6.929625 TCTGGGCAAAAATGATAAAATCGAA 58.070 32.000 0.00 0.00 0.00 3.71
218 219 7.382110 TCTGGGCAAAAATGATAAAATCGAAA 58.618 30.769 0.00 0.00 0.00 3.46
219 220 7.330700 TCTGGGCAAAAATGATAAAATCGAAAC 59.669 33.333 0.00 0.00 0.00 2.78
220 221 7.158021 TGGGCAAAAATGATAAAATCGAAACT 58.842 30.769 0.00 0.00 0.00 2.66
221 222 8.307483 TGGGCAAAAATGATAAAATCGAAACTA 58.693 29.630 0.00 0.00 0.00 2.24
222 223 9.145865 GGGCAAAAATGATAAAATCGAAACTAA 57.854 29.630 0.00 0.00 0.00 2.24
265 266 8.858003 ACACTGTTTACTGAATAGTATGATCG 57.142 34.615 0.00 0.00 37.58 3.69
266 267 7.435488 ACACTGTTTACTGAATAGTATGATCGC 59.565 37.037 0.00 0.00 37.58 4.58
267 268 7.435192 CACTGTTTACTGAATAGTATGATCGCA 59.565 37.037 0.00 0.00 37.58 5.10
268 269 8.144478 ACTGTTTACTGAATAGTATGATCGCAT 58.856 33.333 0.00 0.00 37.86 4.73
269 270 8.887036 TGTTTACTGAATAGTATGATCGCATT 57.113 30.769 0.00 0.00 39.08 3.56
270 271 8.978539 TGTTTACTGAATAGTATGATCGCATTC 58.021 33.333 0.00 0.00 39.08 2.67
271 272 7.796958 TTACTGAATAGTATGATCGCATTCG 57.203 36.000 0.00 0.00 39.08 3.34
272 273 5.773575 ACTGAATAGTATGATCGCATTCGT 58.226 37.500 0.00 0.00 34.74 3.85
273 274 6.909909 ACTGAATAGTATGATCGCATTCGTA 58.090 36.000 0.00 0.00 34.74 3.43
274 275 7.539436 ACTGAATAGTATGATCGCATTCGTAT 58.461 34.615 0.00 0.00 34.74 3.06
275 276 8.029522 ACTGAATAGTATGATCGCATTCGTATT 58.970 33.333 0.00 0.00 34.74 1.89
276 277 8.757164 TGAATAGTATGATCGCATTCGTATTT 57.243 30.769 0.00 0.00 35.94 1.40
277 278 9.203421 TGAATAGTATGATCGCATTCGTATTTT 57.797 29.630 0.00 0.00 35.94 1.82
278 279 9.676899 GAATAGTATGATCGCATTCGTATTTTC 57.323 33.333 0.00 0.00 35.94 2.29
279 280 8.988064 ATAGTATGATCGCATTCGTATTTTCT 57.012 30.769 0.00 0.00 35.94 2.52
280 281 7.715265 AGTATGATCGCATTCGTATTTTCTT 57.285 32.000 0.00 0.00 35.94 2.52
281 282 7.788055 AGTATGATCGCATTCGTATTTTCTTC 58.212 34.615 0.00 0.00 35.94 2.87
282 283 6.603237 ATGATCGCATTCGTATTTTCTTCA 57.397 33.333 0.00 0.00 36.96 3.02
283 284 5.795766 TGATCGCATTCGTATTTTCTTCAC 58.204 37.500 0.00 0.00 36.96 3.18
284 285 5.580691 TGATCGCATTCGTATTTTCTTCACT 59.419 36.000 0.00 0.00 36.96 3.41
285 286 6.754675 TGATCGCATTCGTATTTTCTTCACTA 59.245 34.615 0.00 0.00 36.96 2.74
286 287 6.954616 TCGCATTCGTATTTTCTTCACTAA 57.045 33.333 0.00 0.00 36.96 2.24
287 288 6.989437 TCGCATTCGTATTTTCTTCACTAAG 58.011 36.000 0.00 0.00 36.96 2.18
288 289 6.809689 TCGCATTCGTATTTTCTTCACTAAGA 59.190 34.615 0.00 0.00 37.17 2.10
289 290 7.329962 TCGCATTCGTATTTTCTTCACTAAGAA 59.670 33.333 0.00 0.00 41.76 2.52
299 300 6.636454 TTCTTCACTAAGAATACCATGGGT 57.364 37.500 18.09 4.30 44.85 4.51
300 301 5.989477 TCTTCACTAAGAATACCATGGGTG 58.011 41.667 18.09 11.64 38.81 4.61
301 302 5.487488 TCTTCACTAAGAATACCATGGGTGT 59.513 40.000 18.09 0.00 38.81 4.16
302 303 5.772393 TCACTAAGAATACCATGGGTGTT 57.228 39.130 18.09 7.48 39.66 3.32
303 304 6.877668 TCACTAAGAATACCATGGGTGTTA 57.122 37.500 18.09 8.93 37.16 2.41
304 305 7.260387 TCACTAAGAATACCATGGGTGTTAA 57.740 36.000 18.09 0.00 37.16 2.01
305 306 7.867921 TCACTAAGAATACCATGGGTGTTAAT 58.132 34.615 18.09 0.00 37.16 1.40
306 307 8.994500 TCACTAAGAATACCATGGGTGTTAATA 58.006 33.333 18.09 0.00 37.16 0.98
307 308 9.052759 CACTAAGAATACCATGGGTGTTAATAC 57.947 37.037 18.09 0.00 37.16 1.89
308 309 8.774183 ACTAAGAATACCATGGGTGTTAATACA 58.226 33.333 18.09 0.00 37.16 2.29
309 310 9.793259 CTAAGAATACCATGGGTGTTAATACAT 57.207 33.333 18.09 0.00 37.16 2.29
310 311 8.691661 AAGAATACCATGGGTGTTAATACATC 57.308 34.615 18.09 0.46 37.16 3.06
311 312 7.811282 AGAATACCATGGGTGTTAATACATCA 58.189 34.615 18.09 2.86 37.16 3.07
312 313 8.448008 AGAATACCATGGGTGTTAATACATCAT 58.552 33.333 18.09 4.95 37.16 2.45
313 314 8.408043 AATACCATGGGTGTTAATACATCATG 57.592 34.615 18.09 20.52 42.23 3.07
314 315 6.012337 ACCATGGGTGTTAATACATCATGA 57.988 37.500 25.07 0.00 43.57 3.07
315 316 6.430864 ACCATGGGTGTTAATACATCATGAA 58.569 36.000 25.07 0.00 43.57 2.57
316 317 6.894654 ACCATGGGTGTTAATACATCATGAAA 59.105 34.615 25.07 0.00 43.57 2.69
317 318 7.147915 ACCATGGGTGTTAATACATCATGAAAC 60.148 37.037 25.07 0.00 43.57 2.78
318 319 7.068593 CCATGGGTGTTAATACATCATGAAACT 59.931 37.037 25.07 0.00 43.57 2.66
319 320 8.469200 CATGGGTGTTAATACATCATGAAACTT 58.531 33.333 21.81 0.00 43.57 2.66
320 321 8.050778 TGGGTGTTAATACATCATGAAACTTC 57.949 34.615 0.00 0.00 37.11 3.01
321 322 7.667635 TGGGTGTTAATACATCATGAAACTTCA 59.332 33.333 0.00 0.00 37.11 3.02
322 323 7.968405 GGGTGTTAATACATCATGAAACTTCAC 59.032 37.037 0.00 2.74 37.11 3.18
323 324 8.511321 GGTGTTAATACATCATGAAACTTCACA 58.489 33.333 0.00 0.00 36.97 3.58
324 325 9.329913 GTGTTAATACATCATGAAACTTCACAC 57.670 33.333 0.00 4.68 36.97 3.82
325 326 8.227119 TGTTAATACATCATGAAACTTCACACG 58.773 33.333 0.00 0.00 40.49 4.49
326 327 6.801539 AATACATCATGAAACTTCACACGT 57.198 33.333 0.00 0.00 40.49 4.49
327 328 4.472691 ACATCATGAAACTTCACACGTG 57.527 40.909 15.48 15.48 40.49 4.49
328 329 4.126437 ACATCATGAAACTTCACACGTGA 58.874 39.130 25.01 0.00 40.49 4.35
329 330 4.212004 ACATCATGAAACTTCACACGTGAG 59.788 41.667 25.01 15.63 41.13 3.51
330 331 3.792401 TCATGAAACTTCACACGTGAGT 58.208 40.909 25.01 12.85 42.05 3.41
331 332 4.939271 TCATGAAACTTCACACGTGAGTA 58.061 39.130 25.01 7.42 41.12 2.59
332 333 4.982295 TCATGAAACTTCACACGTGAGTAG 59.018 41.667 25.01 19.68 41.12 2.57
333 334 4.642445 TGAAACTTCACACGTGAGTAGA 57.358 40.909 25.01 11.34 41.13 2.59
334 335 5.001237 TGAAACTTCACACGTGAGTAGAA 57.999 39.130 25.01 17.65 41.13 2.10
335 336 5.597806 TGAAACTTCACACGTGAGTAGAAT 58.402 37.500 25.01 11.44 41.13 2.40
336 337 5.462068 TGAAACTTCACACGTGAGTAGAATG 59.538 40.000 25.01 8.23 41.13 2.67
337 338 6.681865 TGAAACTTCACACGTGAGTAGAATGA 60.682 38.462 25.01 10.74 41.13 2.57
338 339 7.950963 TGAAACTTCACACGTGAGTAGAATGAT 60.951 37.037 25.01 8.72 41.13 2.45
346 347 6.050454 ACGTGAGTAGAATGATCGACTAAG 57.950 41.667 0.00 0.00 46.88 2.18
347 348 5.816258 ACGTGAGTAGAATGATCGACTAAGA 59.184 40.000 0.00 0.00 46.88 2.10
348 349 6.483974 ACGTGAGTAGAATGATCGACTAAGAT 59.516 38.462 0.00 0.00 46.88 2.40
349 350 7.012515 ACGTGAGTAGAATGATCGACTAAGATT 59.987 37.037 0.00 0.00 46.88 2.40
350 351 7.532546 CGTGAGTAGAATGATCGACTAAGATTC 59.467 40.741 0.00 0.00 40.99 2.52
351 352 8.346300 GTGAGTAGAATGATCGACTAAGATTCA 58.654 37.037 0.00 0.00 40.99 2.57
352 353 9.072375 TGAGTAGAATGATCGACTAAGATTCAT 57.928 33.333 0.00 0.00 40.99 2.57
355 356 9.562583 GTAGAATGATCGACTAAGATTCATACC 57.437 37.037 0.00 0.00 0.00 2.73
356 357 7.309177 AGAATGATCGACTAAGATTCATACCG 58.691 38.462 0.00 0.00 0.00 4.02
357 358 4.795268 TGATCGACTAAGATTCATACCGC 58.205 43.478 0.00 0.00 0.00 5.68
358 359 3.263602 TCGACTAAGATTCATACCGCG 57.736 47.619 0.00 0.00 0.00 6.46
359 360 2.874086 TCGACTAAGATTCATACCGCGA 59.126 45.455 8.23 0.00 0.00 5.87
360 361 3.313249 TCGACTAAGATTCATACCGCGAA 59.687 43.478 8.23 0.00 0.00 4.70
361 362 4.039703 CGACTAAGATTCATACCGCGAAA 58.960 43.478 8.23 0.00 0.00 3.46
362 363 4.680110 CGACTAAGATTCATACCGCGAAAT 59.320 41.667 8.23 0.00 0.00 2.17
363 364 5.175126 CGACTAAGATTCATACCGCGAAATT 59.825 40.000 8.23 0.00 0.00 1.82
364 365 6.292168 CGACTAAGATTCATACCGCGAAATTT 60.292 38.462 8.23 0.00 0.00 1.82
365 366 6.945072 ACTAAGATTCATACCGCGAAATTTC 58.055 36.000 8.23 8.20 0.00 2.17
366 367 5.811399 AAGATTCATACCGCGAAATTTCA 57.189 34.783 17.99 0.00 0.00 2.69
367 368 5.409643 AGATTCATACCGCGAAATTTCAG 57.590 39.130 17.99 10.68 0.00 3.02
368 369 5.116180 AGATTCATACCGCGAAATTTCAGA 58.884 37.500 17.99 1.74 0.00 3.27
369 370 5.584649 AGATTCATACCGCGAAATTTCAGAA 59.415 36.000 17.99 9.47 0.00 3.02
370 371 5.811399 TTCATACCGCGAAATTTCAGAAT 57.189 34.783 17.99 3.53 0.00 2.40
371 372 5.811399 TCATACCGCGAAATTTCAGAATT 57.189 34.783 17.99 1.00 37.06 2.17
372 373 6.189677 TCATACCGCGAAATTTCAGAATTT 57.810 33.333 17.99 0.00 45.62 1.82
373 374 6.616947 TCATACCGCGAAATTTCAGAATTTT 58.383 32.000 17.99 3.19 43.61 1.82
374 375 7.087639 TCATACCGCGAAATTTCAGAATTTTT 58.912 30.769 17.99 0.00 43.61 1.94
421 422 6.449635 TGAATTTACTATTCACATGGGTGC 57.550 37.500 0.00 0.00 44.87 5.01
422 423 5.065859 TGAATTTACTATTCACATGGGTGCG 59.934 40.000 0.00 0.00 44.87 5.34
423 424 1.948104 TACTATTCACATGGGTGCGC 58.052 50.000 0.00 0.00 44.87 6.09
424 425 1.089481 ACTATTCACATGGGTGCGCG 61.089 55.000 0.00 0.00 44.87 6.86
425 426 2.378945 CTATTCACATGGGTGCGCGC 62.379 60.000 27.26 27.26 44.87 6.86
439 440 3.726517 GCGCGCACCATGTTCACT 61.727 61.111 29.10 0.00 0.00 3.41
440 441 2.945984 CGCGCACCATGTTCACTT 59.054 55.556 8.75 0.00 0.00 3.16
441 442 1.282570 CGCGCACCATGTTCACTTT 59.717 52.632 8.75 0.00 0.00 2.66
442 443 0.317770 CGCGCACCATGTTCACTTTT 60.318 50.000 8.75 0.00 0.00 2.27
443 444 1.130955 GCGCACCATGTTCACTTTTG 58.869 50.000 0.30 0.00 0.00 2.44
444 445 1.535860 GCGCACCATGTTCACTTTTGT 60.536 47.619 0.30 0.00 0.00 2.83
445 446 2.287308 GCGCACCATGTTCACTTTTGTA 60.287 45.455 0.30 0.00 0.00 2.41
446 447 3.611530 GCGCACCATGTTCACTTTTGTAT 60.612 43.478 0.30 0.00 0.00 2.29
447 448 4.545610 CGCACCATGTTCACTTTTGTATT 58.454 39.130 0.00 0.00 0.00 1.89
448 449 4.981674 CGCACCATGTTCACTTTTGTATTT 59.018 37.500 0.00 0.00 0.00 1.40
449 450 5.461737 CGCACCATGTTCACTTTTGTATTTT 59.538 36.000 0.00 0.00 0.00 1.82
450 451 6.019156 CGCACCATGTTCACTTTTGTATTTTT 60.019 34.615 0.00 0.00 0.00 1.94
451 452 7.125113 GCACCATGTTCACTTTTGTATTTTTG 58.875 34.615 0.00 0.00 0.00 2.44
452 453 7.125113 CACCATGTTCACTTTTGTATTTTTGC 58.875 34.615 0.00 0.00 0.00 3.68
453 454 7.011295 CACCATGTTCACTTTTGTATTTTTGCT 59.989 33.333 0.00 0.00 0.00 3.91
454 455 8.200792 ACCATGTTCACTTTTGTATTTTTGCTA 58.799 29.630 0.00 0.00 0.00 3.49
455 456 9.206870 CCATGTTCACTTTTGTATTTTTGCTAT 57.793 29.630 0.00 0.00 0.00 2.97
509 510 7.495934 AGTTAAATTGATGATCCAGAAGTACGG 59.504 37.037 0.00 0.00 0.00 4.02
552 559 4.504097 AGTTACTTTCGTTCGTGTTACACC 59.496 41.667 10.10 0.00 0.00 4.16
604 611 2.348591 CGAAGCAAACAAGTCGACCTTC 60.349 50.000 13.01 14.07 35.54 3.46
675 1354 3.305744 GGACGAAAGATAGCTCTCATCCC 60.306 52.174 1.56 0.00 0.00 3.85
844 1548 0.392863 CCGTGGCACTTGATCCATCA 60.393 55.000 16.72 0.00 34.47 3.07
869 1573 2.283966 CCGGCGATCCCTATCCCT 60.284 66.667 9.30 0.00 0.00 4.20
1257 2079 4.619973 ACTTGCATACATGGTTTGTGTTG 58.380 39.130 0.00 0.00 39.48 3.33
1420 2332 2.830370 GCAGGGTACTGGCATGGC 60.830 66.667 13.29 13.29 45.04 4.40
1583 2495 2.125512 GGCACCTACGGACAGCAG 60.126 66.667 0.00 0.00 0.00 4.24
2059 2987 5.404366 GTGTATGTATGCTTACGGTATGGTG 59.596 44.000 5.40 0.00 0.00 4.17
2060 2988 4.682778 ATGTATGCTTACGGTATGGTGT 57.317 40.909 5.40 0.00 0.00 4.16
2061 2989 3.787785 TGTATGCTTACGGTATGGTGTG 58.212 45.455 5.40 0.00 0.00 3.82
2068 2999 1.927487 ACGGTATGGTGTGGTACAGA 58.073 50.000 0.00 0.00 41.80 3.41
2142 3075 7.238486 CTTAAGAGCATCATATGTACTCCCT 57.762 40.000 14.54 8.28 37.82 4.20
2143 3076 5.736951 AAGAGCATCATATGTACTCCCTC 57.263 43.478 14.54 8.56 37.82 4.30
2144 3077 4.093011 AGAGCATCATATGTACTCCCTCC 58.907 47.826 14.54 0.00 37.82 4.30
2145 3078 2.828520 AGCATCATATGTACTCCCTCCG 59.171 50.000 1.90 0.00 0.00 4.63
2146 3079 2.563179 GCATCATATGTACTCCCTCCGT 59.437 50.000 1.90 0.00 0.00 4.69
2147 3080 3.006967 GCATCATATGTACTCCCTCCGTT 59.993 47.826 1.90 0.00 0.00 4.44
2148 3081 4.810790 CATCATATGTACTCCCTCCGTTC 58.189 47.826 1.90 0.00 0.00 3.95
2149 3082 2.882761 TCATATGTACTCCCTCCGTTCG 59.117 50.000 1.90 0.00 0.00 3.95
2150 3083 1.683943 TATGTACTCCCTCCGTTCGG 58.316 55.000 4.74 4.74 0.00 4.30
2151 3084 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
2161 3094 2.965671 TCCGTTCGGAGGGAGTATAT 57.034 50.000 10.00 0.00 35.00 0.86
2163 3096 4.581309 TCCGTTCGGAGGGAGTATATAT 57.419 45.455 10.00 0.00 35.00 0.86
2164 3097 4.927049 TCCGTTCGGAGGGAGTATATATT 58.073 43.478 10.00 0.00 35.00 1.28
2165 3098 6.065976 TCCGTTCGGAGGGAGTATATATTA 57.934 41.667 10.00 0.00 35.00 0.98
2166 3099 5.882557 TCCGTTCGGAGGGAGTATATATTAC 59.117 44.000 10.00 0.00 35.00 1.89
2167 3100 5.649395 CCGTTCGGAGGGAGTATATATTACA 59.351 44.000 5.19 0.00 32.44 2.41
2168 3101 6.183360 CCGTTCGGAGGGAGTATATATTACAG 60.183 46.154 5.19 0.00 32.44 2.74
2169 3102 6.373774 CGTTCGGAGGGAGTATATATTACAGT 59.626 42.308 0.00 0.00 0.00 3.55
2170 3103 7.413877 CGTTCGGAGGGAGTATATATTACAGTC 60.414 44.444 0.00 0.00 0.00 3.51
2171 3104 7.268212 TCGGAGGGAGTATATATTACAGTCT 57.732 40.000 0.00 0.00 0.00 3.24
2172 3105 8.384693 TCGGAGGGAGTATATATTACAGTCTA 57.615 38.462 0.00 0.00 0.00 2.59
2173 3106 8.263640 TCGGAGGGAGTATATATTACAGTCTAC 58.736 40.741 0.00 0.00 0.00 2.59
2174 3107 8.045507 CGGAGGGAGTATATATTACAGTCTACA 58.954 40.741 0.00 0.00 0.00 2.74
2175 3108 9.750783 GGAGGGAGTATATATTACAGTCTACAA 57.249 37.037 0.00 0.00 0.00 2.41
2185 3118 3.771577 ACAGTCTACAAAGGGAAGTGG 57.228 47.619 0.00 0.00 0.00 4.00
2186 3119 2.372172 ACAGTCTACAAAGGGAAGTGGG 59.628 50.000 0.00 0.00 0.00 4.61
2187 3120 2.637872 CAGTCTACAAAGGGAAGTGGGA 59.362 50.000 0.00 0.00 0.00 4.37
2188 3121 3.072476 CAGTCTACAAAGGGAAGTGGGAA 59.928 47.826 0.00 0.00 0.00 3.97
2189 3122 3.328050 AGTCTACAAAGGGAAGTGGGAAG 59.672 47.826 0.00 0.00 0.00 3.46
2190 3123 3.072622 GTCTACAAAGGGAAGTGGGAAGT 59.927 47.826 0.00 0.00 0.00 3.01
2191 3124 3.720002 TCTACAAAGGGAAGTGGGAAGTT 59.280 43.478 0.00 0.00 0.00 2.66
2192 3125 2.666317 ACAAAGGGAAGTGGGAAGTTG 58.334 47.619 0.00 0.00 0.00 3.16
2193 3126 1.963515 CAAAGGGAAGTGGGAAGTTGG 59.036 52.381 0.00 0.00 0.00 3.77
2194 3127 1.231963 AAGGGAAGTGGGAAGTTGGT 58.768 50.000 0.00 0.00 0.00 3.67
2195 3128 0.478507 AGGGAAGTGGGAAGTTGGTG 59.521 55.000 0.00 0.00 0.00 4.17
2196 3129 0.539669 GGGAAGTGGGAAGTTGGTGG 60.540 60.000 0.00 0.00 0.00 4.61
2197 3130 1.179174 GGAAGTGGGAAGTTGGTGGC 61.179 60.000 0.00 0.00 0.00 5.01
2198 3131 0.467290 GAAGTGGGAAGTTGGTGGCA 60.467 55.000 0.00 0.00 0.00 4.92
2199 3132 0.468029 AAGTGGGAAGTTGGTGGCAG 60.468 55.000 0.00 0.00 0.00 4.85
2200 3133 1.150536 GTGGGAAGTTGGTGGCAGA 59.849 57.895 0.00 0.00 0.00 4.26
2201 3134 0.467290 GTGGGAAGTTGGTGGCAGAA 60.467 55.000 0.00 0.00 0.00 3.02
2202 3135 0.467290 TGGGAAGTTGGTGGCAGAAC 60.467 55.000 0.00 0.00 0.00 3.01
2223 3156 1.595093 GGCCTTGTGATGAAACCGGG 61.595 60.000 6.32 0.00 0.00 5.73
2242 3175 4.416738 GCACTGGGTCCCTGCCTC 62.417 72.222 14.56 0.80 0.00 4.70
2243 3176 2.608988 CACTGGGTCCCTGCCTCT 60.609 66.667 14.56 0.00 0.00 3.69
2302 3235 8.306761 CAAAAAGAAGAAAATACATACAGGGCT 58.693 33.333 0.00 0.00 0.00 5.19
2304 3237 8.422577 AAAGAAGAAAATACATACAGGGCTTT 57.577 30.769 0.00 0.00 0.00 3.51
2414 3347 9.918630 AAGTTTTATTGATCAAATTCCACAGAG 57.081 29.630 13.09 0.00 0.00 3.35
2415 3348 8.031277 AGTTTTATTGATCAAATTCCACAGAGC 58.969 33.333 13.09 0.00 0.00 4.09
2430 3363 2.760650 ACAGAGCGTGGAATACATCTCA 59.239 45.455 1.63 0.00 35.38 3.27
2432 3365 2.363680 AGAGCGTGGAATACATCTCAGG 59.636 50.000 1.63 0.00 35.38 3.86
2444 3377 1.067295 ATCTCAGGTTGAACCAGCCA 58.933 50.000 17.83 0.00 41.95 4.75
2463 3400 0.691078 ACATGGCGTCCCTCACCTAT 60.691 55.000 0.00 0.00 0.00 2.57
2471 3408 2.543861 CGTCCCTCACCTATCGAATGTG 60.544 54.545 0.00 0.00 0.00 3.21
2476 3413 5.104527 TCCCTCACCTATCGAATGTGAAAAT 60.105 40.000 13.69 0.00 38.45 1.82
2482 3419 7.552687 TCACCTATCGAATGTGAAAATTTAGCT 59.447 33.333 11.25 0.00 36.16 3.32
2492 3429 7.290857 TGTGAAAATTTAGCTAGATCGTGAC 57.709 36.000 0.00 0.00 0.00 3.67
2512 3449 6.127703 CGTGACCCTCTTTATTTGTCTCTCTA 60.128 42.308 0.00 0.00 0.00 2.43
2513 3450 7.036829 GTGACCCTCTTTATTTGTCTCTCTAC 58.963 42.308 0.00 0.00 0.00 2.59
2514 3451 6.154706 TGACCCTCTTTATTTGTCTCTCTACC 59.845 42.308 0.00 0.00 0.00 3.18
2515 3452 6.265304 ACCCTCTTTATTTGTCTCTCTACCT 58.735 40.000 0.00 0.00 0.00 3.08
2517 3454 7.093245 ACCCTCTTTATTTGTCTCTCTACCTTC 60.093 40.741 0.00 0.00 0.00 3.46
2518 3455 7.093289 CCCTCTTTATTTGTCTCTCTACCTTCA 60.093 40.741 0.00 0.00 0.00 3.02
2586 3527 8.840200 TCACTAATAAGACTACCAAATCTCCT 57.160 34.615 0.00 0.00 0.00 3.69
2587 3528 8.915036 TCACTAATAAGACTACCAAATCTCCTC 58.085 37.037 0.00 0.00 0.00 3.71
2589 3530 8.919145 ACTAATAAGACTACCAAATCTCCTCTG 58.081 37.037 0.00 0.00 0.00 3.35
2590 3531 7.979786 AATAAGACTACCAAATCTCCTCTGA 57.020 36.000 0.00 0.00 0.00 3.27
2591 3532 7.979786 ATAAGACTACCAAATCTCCTCTGAA 57.020 36.000 0.00 0.00 0.00 3.02
2592 3533 5.930837 AGACTACCAAATCTCCTCTGAAG 57.069 43.478 0.00 0.00 0.00 3.02
2593 3534 5.337788 AGACTACCAAATCTCCTCTGAAGT 58.662 41.667 0.00 0.00 0.00 3.01
2600 3582 6.656693 ACCAAATCTCCTCTGAAGTAACAATG 59.343 38.462 0.00 0.00 0.00 2.82
2635 3617 1.946768 AGATCGTCTGCTAGAGAGTGC 59.053 52.381 0.00 0.00 0.00 4.40
2643 3625 2.026945 GCTAGAGAGTGCCTCCCTGC 62.027 65.000 0.00 0.00 42.97 4.85
2658 3640 2.596923 TGCACGCAATGGCTTCCA 60.597 55.556 0.00 0.00 38.19 3.53
2659 3641 2.144833 CTGCACGCAATGGCTTCCAA 62.145 55.000 0.00 0.00 36.95 3.53
2660 3642 1.444895 GCACGCAATGGCTTCCAAG 60.445 57.895 0.00 0.00 36.95 3.61
2661 3643 1.959085 CACGCAATGGCTTCCAAGT 59.041 52.632 0.00 0.00 36.95 3.16
2662 3644 1.164411 CACGCAATGGCTTCCAAGTA 58.836 50.000 0.00 0.00 36.95 2.24
2663 3645 1.745087 CACGCAATGGCTTCCAAGTAT 59.255 47.619 0.00 0.00 36.95 2.12
2664 3646 2.164219 CACGCAATGGCTTCCAAGTATT 59.836 45.455 0.00 0.00 36.95 1.89
2665 3647 2.164219 ACGCAATGGCTTCCAAGTATTG 59.836 45.455 11.18 11.18 41.65 1.90
2666 3648 2.164219 CGCAATGGCTTCCAAGTATTGT 59.836 45.455 14.46 0.00 40.80 2.71
2667 3649 3.367292 CGCAATGGCTTCCAAGTATTGTT 60.367 43.478 14.46 0.00 40.80 2.83
2668 3650 4.142491 CGCAATGGCTTCCAAGTATTGTTA 60.142 41.667 14.46 0.00 40.80 2.41
2669 3651 5.343249 GCAATGGCTTCCAAGTATTGTTAG 58.657 41.667 14.46 0.00 40.12 2.34
2670 3652 5.105756 GCAATGGCTTCCAAGTATTGTTAGT 60.106 40.000 14.46 0.00 40.12 2.24
2671 3653 6.572314 GCAATGGCTTCCAAGTATTGTTAGTT 60.572 38.462 14.46 0.00 40.12 2.24
2672 3654 7.378181 CAATGGCTTCCAAGTATTGTTAGTTT 58.622 34.615 8.86 0.00 46.99 2.66
2673 3655 6.969993 TGGCTTCCAAGTATTGTTAGTTTT 57.030 33.333 0.00 0.00 46.99 2.43
2674 3656 6.744112 TGGCTTCCAAGTATTGTTAGTTTTG 58.256 36.000 0.00 0.00 46.99 2.44
2675 3657 5.633601 GGCTTCCAAGTATTGTTAGTTTTGC 59.366 40.000 0.00 0.00 46.99 3.68
2676 3658 6.212955 GCTTCCAAGTATTGTTAGTTTTGCA 58.787 36.000 0.00 0.00 46.99 4.08
2677 3659 6.363357 GCTTCCAAGTATTGTTAGTTTTGCAG 59.637 38.462 0.00 0.00 46.99 4.41
2678 3660 7.575414 TTCCAAGTATTGTTAGTTTTGCAGA 57.425 32.000 0.00 0.00 46.99 4.26
2679 3661 7.202016 TCCAAGTATTGTTAGTTTTGCAGAG 57.798 36.000 0.00 0.00 46.99 3.35
2680 3662 5.858581 CCAAGTATTGTTAGTTTTGCAGAGC 59.141 40.000 0.00 0.00 46.99 4.09
2681 3663 6.437928 CAAGTATTGTTAGTTTTGCAGAGCA 58.562 36.000 0.00 0.00 42.34 4.26
2682 3664 6.246420 AGTATTGTTAGTTTTGCAGAGCAG 57.754 37.500 0.00 0.00 40.61 4.24
2683 3665 5.997746 AGTATTGTTAGTTTTGCAGAGCAGA 59.002 36.000 0.00 0.00 40.61 4.26
2684 3666 5.972107 ATTGTTAGTTTTGCAGAGCAGAT 57.028 34.783 0.00 0.00 40.61 2.90
2685 3667 5.362556 TTGTTAGTTTTGCAGAGCAGATC 57.637 39.130 0.00 0.00 40.61 2.75
2686 3668 3.433274 TGTTAGTTTTGCAGAGCAGATCG 59.567 43.478 0.00 0.00 40.61 3.69
2687 3669 2.175878 AGTTTTGCAGAGCAGATCGT 57.824 45.000 0.00 0.00 40.61 3.73
2688 3670 2.072298 AGTTTTGCAGAGCAGATCGTC 58.928 47.619 0.00 0.00 40.61 4.20
2689 3671 2.072298 GTTTTGCAGAGCAGATCGTCT 58.928 47.619 0.00 0.00 40.61 4.18
2690 3672 1.718396 TTTGCAGAGCAGATCGTCTG 58.282 50.000 14.90 14.90 46.90 3.51
2701 3683 2.857152 CAGATCGTCTGCTAAAGAGTGC 59.143 50.000 2.75 0.00 37.72 4.40
2702 3684 2.159170 AGATCGTCTGCTAAAGAGTGCC 60.159 50.000 0.00 0.00 34.84 5.01
2703 3685 1.257743 TCGTCTGCTAAAGAGTGCCT 58.742 50.000 0.00 0.00 34.84 4.75
2704 3686 1.202582 TCGTCTGCTAAAGAGTGCCTC 59.797 52.381 0.00 0.00 34.84 4.70
2705 3687 1.737363 CGTCTGCTAAAGAGTGCCTCC 60.737 57.143 0.00 0.00 34.84 4.30
2706 3688 0.905357 TCTGCTAAAGAGTGCCTCCC 59.095 55.000 0.00 0.00 0.00 4.30
2707 3689 0.908198 CTGCTAAAGAGTGCCTCCCT 59.092 55.000 0.00 0.00 0.00 4.20
2708 3690 0.615331 TGCTAAAGAGTGCCTCCCTG 59.385 55.000 0.00 0.00 0.00 4.45
2709 3691 0.746204 GCTAAAGAGTGCCTCCCTGC 60.746 60.000 0.00 0.00 0.00 4.85
2710 3692 0.615331 CTAAAGAGTGCCTCCCTGCA 59.385 55.000 0.00 0.00 39.37 4.41
2716 3698 2.845784 TGCCTCCCTGCACACAAT 59.154 55.556 0.00 0.00 36.04 2.71
2717 3699 1.604308 TGCCTCCCTGCACACAATG 60.604 57.895 0.00 0.00 36.04 2.82
2718 3700 2.345760 GCCTCCCTGCACACAATGG 61.346 63.158 0.00 0.00 0.00 3.16
2719 3701 2.345760 CCTCCCTGCACACAATGGC 61.346 63.158 0.00 0.00 0.00 4.40
2720 3702 1.303888 CTCCCTGCACACAATGGCT 60.304 57.895 0.00 0.00 0.00 4.75
2721 3703 0.896940 CTCCCTGCACACAATGGCTT 60.897 55.000 0.00 0.00 0.00 4.35
2722 3704 0.469705 TCCCTGCACACAATGGCTTT 60.470 50.000 0.00 0.00 0.00 3.51
2723 3705 0.393820 CCCTGCACACAATGGCTTTT 59.606 50.000 0.00 0.00 0.00 2.27
2724 3706 1.617850 CCCTGCACACAATGGCTTTTA 59.382 47.619 0.00 0.00 0.00 1.52
2756 3738 2.820059 TCACGGATGCCATGTATCTC 57.180 50.000 7.02 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.997545 ATAGGGAGTACGTAGGACTCAT 57.002 45.455 16.60 8.58 44.34 2.90
1 2 4.785346 AATAGGGAGTACGTAGGACTCA 57.215 45.455 16.60 0.00 44.34 3.41
2 3 7.309073 CCATAAAATAGGGAGTACGTAGGACTC 60.309 44.444 8.21 8.21 42.24 3.36
3 4 6.492772 CCATAAAATAGGGAGTACGTAGGACT 59.507 42.308 0.00 0.00 0.00 3.85
4 5 6.491403 TCCATAAAATAGGGAGTACGTAGGAC 59.509 42.308 0.00 0.00 32.99 3.85
6 7 6.569226 CGTCCATAAAATAGGGAGTACGTAGG 60.569 46.154 0.00 0.00 39.64 3.18
7 8 6.376978 CGTCCATAAAATAGGGAGTACGTAG 58.623 44.000 0.00 0.00 39.64 3.51
8 9 5.278463 GCGTCCATAAAATAGGGAGTACGTA 60.278 44.000 0.00 0.00 39.64 3.57
11 12 3.985925 CGCGTCCATAAAATAGGGAGTAC 59.014 47.826 0.00 0.00 39.64 2.73
13 14 2.224209 CCGCGTCCATAAAATAGGGAGT 60.224 50.000 4.92 0.00 39.64 3.85
14 15 2.036733 TCCGCGTCCATAAAATAGGGAG 59.963 50.000 4.92 0.00 39.64 4.30
15 16 2.040939 TCCGCGTCCATAAAATAGGGA 58.959 47.619 4.92 0.00 36.08 4.20
16 17 2.536761 TCCGCGTCCATAAAATAGGG 57.463 50.000 4.92 0.00 0.00 3.53
17 18 4.320202 CCAAATCCGCGTCCATAAAATAGG 60.320 45.833 4.92 0.00 0.00 2.57
18 19 4.274950 ACCAAATCCGCGTCCATAAAATAG 59.725 41.667 4.92 0.00 0.00 1.73
19 20 4.035792 CACCAAATCCGCGTCCATAAAATA 59.964 41.667 4.92 0.00 0.00 1.40
20 21 3.020984 ACCAAATCCGCGTCCATAAAAT 58.979 40.909 4.92 0.00 0.00 1.82
21 22 2.162608 CACCAAATCCGCGTCCATAAAA 59.837 45.455 4.92 0.00 0.00 1.52
22 23 1.740585 CACCAAATCCGCGTCCATAAA 59.259 47.619 4.92 0.00 0.00 1.40
23 24 1.066071 TCACCAAATCCGCGTCCATAA 60.066 47.619 4.92 0.00 0.00 1.90
24 25 0.537653 TCACCAAATCCGCGTCCATA 59.462 50.000 4.92 0.00 0.00 2.74
25 26 0.322098 TTCACCAAATCCGCGTCCAT 60.322 50.000 4.92 0.00 0.00 3.41
26 27 0.322098 ATTCACCAAATCCGCGTCCA 60.322 50.000 4.92 0.00 0.00 4.02
27 28 1.658994 TATTCACCAAATCCGCGTCC 58.341 50.000 4.92 0.00 0.00 4.79
28 29 2.032030 CCATATTCACCAAATCCGCGTC 60.032 50.000 4.92 0.00 0.00 5.19
29 30 1.946768 CCATATTCACCAAATCCGCGT 59.053 47.619 4.92 0.00 0.00 6.01
30 31 1.266718 CCCATATTCACCAAATCCGCG 59.733 52.381 0.00 0.00 0.00 6.46
31 32 2.034558 CACCCATATTCACCAAATCCGC 59.965 50.000 0.00 0.00 0.00 5.54
32 33 2.034558 GCACCCATATTCACCAAATCCG 59.965 50.000 0.00 0.00 0.00 4.18
33 34 2.034558 CGCACCCATATTCACCAAATCC 59.965 50.000 0.00 0.00 0.00 3.01
34 35 2.543653 GCGCACCCATATTCACCAAATC 60.544 50.000 0.30 0.00 0.00 2.17
35 36 1.408702 GCGCACCCATATTCACCAAAT 59.591 47.619 0.30 0.00 0.00 2.32
36 37 0.814457 GCGCACCCATATTCACCAAA 59.186 50.000 0.30 0.00 0.00 3.28
37 38 1.372838 CGCGCACCCATATTCACCAA 61.373 55.000 8.75 0.00 0.00 3.67
38 39 1.817520 CGCGCACCCATATTCACCA 60.818 57.895 8.75 0.00 0.00 4.17
39 40 3.022287 CGCGCACCCATATTCACC 58.978 61.111 8.75 0.00 0.00 4.02
40 41 2.327940 GCGCGCACCCATATTCAC 59.672 61.111 29.10 0.00 0.00 3.18
41 42 3.268603 CGCGCGCACCCATATTCA 61.269 61.111 32.61 0.00 0.00 2.57
42 43 4.666532 GCGCGCGCACCCATATTC 62.667 66.667 46.11 15.61 41.49 1.75
52 53 2.312398 TTTATAAAGGGTGCGCGCGC 62.312 55.000 45.02 45.02 42.35 6.86
53 54 0.306533 ATTTATAAAGGGTGCGCGCG 59.693 50.000 28.44 28.44 0.00 6.86
54 55 2.546789 ACTATTTATAAAGGGTGCGCGC 59.453 45.455 27.26 27.26 0.00 6.86
55 56 5.910637 TTACTATTTATAAAGGGTGCGCG 57.089 39.130 0.00 0.00 0.00 6.86
56 57 8.347035 TGAATTTACTATTTATAAAGGGTGCGC 58.653 33.333 0.00 0.00 0.00 6.09
130 131 8.133627 GCGAGTATACCGGTTGATTATGTATAT 58.866 37.037 15.04 0.00 29.87 0.86
131 132 7.121020 TGCGAGTATACCGGTTGATTATGTATA 59.879 37.037 15.04 0.00 0.00 1.47
132 133 6.071784 TGCGAGTATACCGGTTGATTATGTAT 60.072 38.462 15.04 0.00 0.00 2.29
133 134 5.241285 TGCGAGTATACCGGTTGATTATGTA 59.759 40.000 15.04 0.00 0.00 2.29
134 135 4.038282 TGCGAGTATACCGGTTGATTATGT 59.962 41.667 15.04 0.00 0.00 2.29
135 136 4.552355 TGCGAGTATACCGGTTGATTATG 58.448 43.478 15.04 0.00 0.00 1.90
136 137 4.859304 TGCGAGTATACCGGTTGATTAT 57.141 40.909 15.04 1.20 0.00 1.28
137 138 4.859304 ATGCGAGTATACCGGTTGATTA 57.141 40.909 15.04 0.00 0.00 1.75
138 139 3.746045 ATGCGAGTATACCGGTTGATT 57.254 42.857 15.04 0.00 0.00 2.57
139 140 4.461431 TCATATGCGAGTATACCGGTTGAT 59.539 41.667 15.04 3.06 0.00 2.57
140 141 3.822167 TCATATGCGAGTATACCGGTTGA 59.178 43.478 15.04 2.06 0.00 3.18
141 142 4.168922 TCATATGCGAGTATACCGGTTG 57.831 45.455 15.04 0.00 0.00 3.77
142 143 4.280174 ACTTCATATGCGAGTATACCGGTT 59.720 41.667 15.04 3.05 0.00 4.44
143 144 3.825014 ACTTCATATGCGAGTATACCGGT 59.175 43.478 13.98 13.98 0.00 5.28
144 145 4.436242 ACTTCATATGCGAGTATACCGG 57.564 45.455 0.00 0.00 0.00 5.28
145 146 5.918576 TGAAACTTCATATGCGAGTATACCG 59.081 40.000 10.69 4.41 31.01 4.02
146 147 6.129168 CGTGAAACTTCATATGCGAGTATACC 60.129 42.308 10.69 0.00 39.73 2.73
147 148 6.635641 TCGTGAAACTTCATATGCGAGTATAC 59.364 38.462 10.69 0.00 39.73 1.47
148 149 6.731164 TCGTGAAACTTCATATGCGAGTATA 58.269 36.000 10.69 1.18 39.73 1.47
149 150 5.588240 TCGTGAAACTTCATATGCGAGTAT 58.412 37.500 10.69 2.01 39.73 2.12
150 151 4.989044 TCGTGAAACTTCATATGCGAGTA 58.011 39.130 10.69 0.00 39.73 2.59
151 152 3.845178 TCGTGAAACTTCATATGCGAGT 58.155 40.909 0.00 1.86 39.73 4.18
152 153 4.562789 TCTTCGTGAAACTTCATATGCGAG 59.437 41.667 0.00 1.21 39.73 5.03
153 154 4.490743 TCTTCGTGAAACTTCATATGCGA 58.509 39.130 0.00 0.00 39.73 5.10
154 155 4.840401 TCTTCGTGAAACTTCATATGCG 57.160 40.909 0.00 0.00 39.73 4.73
155 156 7.243487 TGATTTCTTCGTGAAACTTCATATGC 58.757 34.615 0.00 0.00 46.08 3.14
159 160 8.616076 GGATATGATTTCTTCGTGAAACTTCAT 58.384 33.333 17.57 17.57 46.08 2.57
160 161 7.201522 CGGATATGATTTCTTCGTGAAACTTCA 60.202 37.037 8.09 9.23 46.08 3.02
161 162 7.119997 CGGATATGATTTCTTCGTGAAACTTC 58.880 38.462 8.09 5.07 46.08 3.01
162 163 6.594159 ACGGATATGATTTCTTCGTGAAACTT 59.406 34.615 8.09 5.10 46.08 2.66
163 164 6.036083 CACGGATATGATTTCTTCGTGAAACT 59.964 38.462 7.08 0.78 46.08 2.66
164 165 6.185399 CACGGATATGATTTCTTCGTGAAAC 58.815 40.000 7.08 4.80 46.08 2.78
165 166 5.293324 CCACGGATATGATTTCTTCGTGAAA 59.707 40.000 13.37 8.30 46.03 2.69
166 167 4.808895 CCACGGATATGATTTCTTCGTGAA 59.191 41.667 13.37 0.00 46.03 3.18
167 168 4.142026 ACCACGGATATGATTTCTTCGTGA 60.142 41.667 13.37 0.00 46.03 4.35
168 169 4.119862 ACCACGGATATGATTTCTTCGTG 58.880 43.478 0.00 0.00 43.80 4.35
169 170 4.402056 ACCACGGATATGATTTCTTCGT 57.598 40.909 0.00 0.00 0.00 3.85
170 171 6.868864 AGATTACCACGGATATGATTTCTTCG 59.131 38.462 0.00 0.00 0.00 3.79
171 172 7.118390 CCAGATTACCACGGATATGATTTCTTC 59.882 40.741 0.00 0.00 0.00 2.87
172 173 6.936900 CCAGATTACCACGGATATGATTTCTT 59.063 38.462 0.00 0.00 0.00 2.52
173 174 6.467677 CCAGATTACCACGGATATGATTTCT 58.532 40.000 0.00 0.00 0.00 2.52
174 175 5.643777 CCCAGATTACCACGGATATGATTTC 59.356 44.000 0.00 0.00 0.00 2.17
175 176 5.560724 CCCAGATTACCACGGATATGATTT 58.439 41.667 0.00 0.00 0.00 2.17
176 177 4.565652 GCCCAGATTACCACGGATATGATT 60.566 45.833 0.00 0.00 0.00 2.57
177 178 3.055094 GCCCAGATTACCACGGATATGAT 60.055 47.826 0.00 0.00 0.00 2.45
178 179 2.301870 GCCCAGATTACCACGGATATGA 59.698 50.000 0.00 0.00 0.00 2.15
179 180 2.038426 TGCCCAGATTACCACGGATATG 59.962 50.000 0.00 0.00 0.00 1.78
180 181 2.334977 TGCCCAGATTACCACGGATAT 58.665 47.619 0.00 0.00 0.00 1.63
181 182 1.796017 TGCCCAGATTACCACGGATA 58.204 50.000 0.00 0.00 0.00 2.59
182 183 0.916086 TTGCCCAGATTACCACGGAT 59.084 50.000 0.00 0.00 0.00 4.18
183 184 0.693622 TTTGCCCAGATTACCACGGA 59.306 50.000 0.00 0.00 0.00 4.69
184 185 1.540267 TTTTGCCCAGATTACCACGG 58.460 50.000 0.00 0.00 0.00 4.94
185 186 3.192422 TCATTTTTGCCCAGATTACCACG 59.808 43.478 0.00 0.00 0.00 4.94
186 187 4.799564 TCATTTTTGCCCAGATTACCAC 57.200 40.909 0.00 0.00 0.00 4.16
187 188 7.487822 TTTATCATTTTTGCCCAGATTACCA 57.512 32.000 0.00 0.00 0.00 3.25
188 189 8.962884 ATTTTATCATTTTTGCCCAGATTACC 57.037 30.769 0.00 0.00 0.00 2.85
189 190 8.755018 CGATTTTATCATTTTTGCCCAGATTAC 58.245 33.333 0.00 0.00 0.00 1.89
190 191 8.690884 TCGATTTTATCATTTTTGCCCAGATTA 58.309 29.630 0.00 0.00 0.00 1.75
191 192 7.555087 TCGATTTTATCATTTTTGCCCAGATT 58.445 30.769 0.00 0.00 0.00 2.40
192 193 7.111247 TCGATTTTATCATTTTTGCCCAGAT 57.889 32.000 0.00 0.00 0.00 2.90
193 194 6.522625 TCGATTTTATCATTTTTGCCCAGA 57.477 33.333 0.00 0.00 0.00 3.86
194 195 7.331687 AGTTTCGATTTTATCATTTTTGCCCAG 59.668 33.333 0.00 0.00 0.00 4.45
195 196 7.158021 AGTTTCGATTTTATCATTTTTGCCCA 58.842 30.769 0.00 0.00 0.00 5.36
196 197 7.595311 AGTTTCGATTTTATCATTTTTGCCC 57.405 32.000 0.00 0.00 0.00 5.36
203 204 9.651718 GCTTCGATTAGTTTCGATTTTATCATT 57.348 29.630 0.00 0.00 46.55 2.57
204 205 9.046296 AGCTTCGATTAGTTTCGATTTTATCAT 57.954 29.630 0.00 0.00 46.55 2.45
205 206 8.420374 AGCTTCGATTAGTTTCGATTTTATCA 57.580 30.769 0.00 0.00 46.55 2.15
239 240 9.302345 CGATCATACTATTCAGTAAACAGTGTT 57.698 33.333 1.64 1.64 40.61 3.32
240 241 7.435488 GCGATCATACTATTCAGTAAACAGTGT 59.565 37.037 0.00 0.00 40.61 3.55
241 242 7.435192 TGCGATCATACTATTCAGTAAACAGTG 59.565 37.037 0.00 0.00 40.61 3.66
242 243 7.489160 TGCGATCATACTATTCAGTAAACAGT 58.511 34.615 0.00 0.00 40.61 3.55
243 244 7.930513 TGCGATCATACTATTCAGTAAACAG 57.069 36.000 0.00 0.00 40.61 3.16
244 245 8.887036 AATGCGATCATACTATTCAGTAAACA 57.113 30.769 0.00 0.00 40.61 2.83
245 246 8.156553 CGAATGCGATCATACTATTCAGTAAAC 58.843 37.037 0.00 0.00 39.20 2.01
246 247 7.865889 ACGAATGCGATCATACTATTCAGTAAA 59.134 33.333 0.00 0.00 39.70 2.01
247 248 7.368059 ACGAATGCGATCATACTATTCAGTAA 58.632 34.615 0.00 0.00 39.70 2.24
248 249 6.909909 ACGAATGCGATCATACTATTCAGTA 58.090 36.000 0.00 0.00 40.17 2.74
249 250 5.773575 ACGAATGCGATCATACTATTCAGT 58.226 37.500 0.00 0.00 41.64 3.41
250 251 7.977490 ATACGAATGCGATCATACTATTCAG 57.023 36.000 0.00 0.00 41.64 3.02
251 252 8.757164 AAATACGAATGCGATCATACTATTCA 57.243 30.769 0.00 0.00 41.64 2.57
252 253 9.676899 GAAAATACGAATGCGATCATACTATTC 57.323 33.333 0.00 0.00 41.64 1.75
253 254 9.424319 AGAAAATACGAATGCGATCATACTATT 57.576 29.630 0.00 0.00 41.64 1.73
254 255 8.988064 AGAAAATACGAATGCGATCATACTAT 57.012 30.769 0.00 0.00 41.64 2.12
255 256 8.812147 AAGAAAATACGAATGCGATCATACTA 57.188 30.769 0.00 0.00 41.64 1.82
256 257 7.438160 TGAAGAAAATACGAATGCGATCATACT 59.562 33.333 0.00 0.00 41.64 2.12
257 258 7.527516 GTGAAGAAAATACGAATGCGATCATAC 59.472 37.037 0.00 0.00 41.64 2.39
258 259 7.438160 AGTGAAGAAAATACGAATGCGATCATA 59.562 33.333 0.00 0.00 41.64 2.15
259 260 6.258727 AGTGAAGAAAATACGAATGCGATCAT 59.741 34.615 0.00 0.00 41.64 2.45
260 261 5.580691 AGTGAAGAAAATACGAATGCGATCA 59.419 36.000 0.00 0.00 41.64 2.92
261 262 6.037423 AGTGAAGAAAATACGAATGCGATC 57.963 37.500 0.00 0.00 41.64 3.69
262 263 7.491372 TCTTAGTGAAGAAAATACGAATGCGAT 59.509 33.333 0.00 0.00 38.80 4.58
263 264 6.809689 TCTTAGTGAAGAAAATACGAATGCGA 59.190 34.615 0.00 0.00 38.80 5.10
264 265 6.989437 TCTTAGTGAAGAAAATACGAATGCG 58.011 36.000 0.00 0.00 38.80 4.73
274 275 7.393234 CACCCATGGTATTCTTAGTGAAGAAAA 59.607 37.037 11.73 0.00 43.53 2.29
275 276 6.884295 CACCCATGGTATTCTTAGTGAAGAAA 59.116 38.462 11.73 0.00 43.53 2.52
276 277 6.012858 ACACCCATGGTATTCTTAGTGAAGAA 60.013 38.462 17.12 2.80 44.02 2.52
277 278 5.487488 ACACCCATGGTATTCTTAGTGAAGA 59.513 40.000 17.12 0.00 35.30 2.87
278 279 5.745227 ACACCCATGGTATTCTTAGTGAAG 58.255 41.667 17.12 0.00 33.70 3.02
279 280 5.772393 ACACCCATGGTATTCTTAGTGAA 57.228 39.130 17.12 0.00 34.39 3.18
280 281 5.772393 AACACCCATGGTATTCTTAGTGA 57.228 39.130 17.12 0.00 32.11 3.41
281 282 9.052759 GTATTAACACCCATGGTATTCTTAGTG 57.947 37.037 11.73 11.15 32.11 2.74
282 283 8.774183 TGTATTAACACCCATGGTATTCTTAGT 58.226 33.333 11.73 0.00 32.11 2.24
283 284 9.793259 ATGTATTAACACCCATGGTATTCTTAG 57.207 33.333 11.73 0.00 38.78 2.18
284 285 9.787435 GATGTATTAACACCCATGGTATTCTTA 57.213 33.333 11.73 0.00 38.78 2.10
285 286 8.278639 TGATGTATTAACACCCATGGTATTCTT 58.721 33.333 11.73 0.00 38.78 2.52
286 287 7.811282 TGATGTATTAACACCCATGGTATTCT 58.189 34.615 11.73 0.00 38.78 2.40
287 288 8.514594 CATGATGTATTAACACCCATGGTATTC 58.485 37.037 11.73 0.00 41.54 1.75
288 289 8.224025 TCATGATGTATTAACACCCATGGTATT 58.776 33.333 11.73 4.33 43.35 1.89
289 290 7.754624 TCATGATGTATTAACACCCATGGTAT 58.245 34.615 11.73 0.00 43.35 2.73
290 291 7.142995 TCATGATGTATTAACACCCATGGTA 57.857 36.000 11.73 0.00 43.35 3.25
291 292 6.012337 TCATGATGTATTAACACCCATGGT 57.988 37.500 11.73 0.00 43.35 3.55
292 293 6.957920 TTCATGATGTATTAACACCCATGG 57.042 37.500 4.14 4.14 43.35 3.66
293 294 7.999679 AGTTTCATGATGTATTAACACCCATG 58.000 34.615 0.00 9.00 43.89 3.66
294 295 8.593945 AAGTTTCATGATGTATTAACACCCAT 57.406 30.769 0.00 0.00 38.78 4.00
295 296 7.667635 TGAAGTTTCATGATGTATTAACACCCA 59.332 33.333 0.00 0.00 33.16 4.51
296 297 7.968405 GTGAAGTTTCATGATGTATTAACACCC 59.032 37.037 0.00 0.00 37.76 4.61
297 298 8.511321 TGTGAAGTTTCATGATGTATTAACACC 58.489 33.333 0.00 0.00 37.76 4.16
298 299 9.329913 GTGTGAAGTTTCATGATGTATTAACAC 57.670 33.333 11.99 11.99 37.76 3.32
299 300 8.227119 CGTGTGAAGTTTCATGATGTATTAACA 58.773 33.333 0.00 0.00 39.73 2.41
300 301 8.227791 ACGTGTGAAGTTTCATGATGTATTAAC 58.772 33.333 0.00 0.00 39.73 2.01
301 302 8.227119 CACGTGTGAAGTTTCATGATGTATTAA 58.773 33.333 7.58 0.00 39.73 1.40
302 303 7.600752 TCACGTGTGAAGTTTCATGATGTATTA 59.399 33.333 16.51 0.00 39.73 0.98
303 304 6.426633 TCACGTGTGAAGTTTCATGATGTATT 59.573 34.615 16.51 0.00 39.73 1.89
304 305 5.931724 TCACGTGTGAAGTTTCATGATGTAT 59.068 36.000 16.51 0.00 39.73 2.29
305 306 5.293560 TCACGTGTGAAGTTTCATGATGTA 58.706 37.500 16.51 0.00 39.73 2.29
306 307 4.126437 TCACGTGTGAAGTTTCATGATGT 58.874 39.130 16.51 0.00 39.73 3.06
307 308 4.212004 ACTCACGTGTGAAGTTTCATGATG 59.788 41.667 23.32 0.00 39.73 3.07
308 309 4.380531 ACTCACGTGTGAAGTTTCATGAT 58.619 39.130 23.32 0.00 39.73 2.45
309 310 3.792401 ACTCACGTGTGAAGTTTCATGA 58.208 40.909 23.32 0.00 39.73 3.07
310 311 4.982295 TCTACTCACGTGTGAAGTTTCATG 59.018 41.667 23.32 5.70 39.73 3.07
311 312 5.196341 TCTACTCACGTGTGAAGTTTCAT 57.804 39.130 23.32 1.82 39.73 2.57
312 313 4.642445 TCTACTCACGTGTGAAGTTTCA 57.358 40.909 23.32 1.19 39.39 2.69
313 314 5.690409 TCATTCTACTCACGTGTGAAGTTTC 59.310 40.000 23.32 0.00 39.39 2.78
314 315 5.597806 TCATTCTACTCACGTGTGAAGTTT 58.402 37.500 23.32 3.93 39.39 2.66
315 316 5.196341 TCATTCTACTCACGTGTGAAGTT 57.804 39.130 23.32 4.30 39.39 2.66
316 317 4.848562 TCATTCTACTCACGTGTGAAGT 57.151 40.909 23.32 17.54 39.39 3.01
317 318 4.497251 CGATCATTCTACTCACGTGTGAAG 59.503 45.833 23.32 12.53 39.39 3.02
318 319 4.155280 TCGATCATTCTACTCACGTGTGAA 59.845 41.667 23.32 18.02 39.39 3.18
319 320 3.687698 TCGATCATTCTACTCACGTGTGA 59.312 43.478 23.32 14.13 38.06 3.58
320 321 3.786576 GTCGATCATTCTACTCACGTGTG 59.213 47.826 16.51 16.06 0.00 3.82
321 322 3.690139 AGTCGATCATTCTACTCACGTGT 59.310 43.478 16.51 0.00 0.00 4.49
322 323 4.280101 AGTCGATCATTCTACTCACGTG 57.720 45.455 9.94 9.94 0.00 4.49
323 324 5.816258 TCTTAGTCGATCATTCTACTCACGT 59.184 40.000 0.00 0.00 31.03 4.49
324 325 6.288426 TCTTAGTCGATCATTCTACTCACG 57.712 41.667 0.00 0.00 31.03 4.35
325 326 8.346300 TGAATCTTAGTCGATCATTCTACTCAC 58.654 37.037 0.00 0.00 31.03 3.51
326 327 8.451908 TGAATCTTAGTCGATCATTCTACTCA 57.548 34.615 0.00 0.00 31.03 3.41
329 330 9.562583 GGTATGAATCTTAGTCGATCATTCTAC 57.437 37.037 1.13 0.00 0.00 2.59
330 331 8.451748 CGGTATGAATCTTAGTCGATCATTCTA 58.548 37.037 1.13 0.00 0.00 2.10
331 332 7.309177 CGGTATGAATCTTAGTCGATCATTCT 58.691 38.462 1.13 0.00 0.00 2.40
332 333 6.034044 GCGGTATGAATCTTAGTCGATCATTC 59.966 42.308 1.13 0.00 0.00 2.67
333 334 5.864474 GCGGTATGAATCTTAGTCGATCATT 59.136 40.000 1.13 0.00 0.00 2.57
334 335 5.403246 GCGGTATGAATCTTAGTCGATCAT 58.597 41.667 0.00 0.00 0.00 2.45
335 336 4.612939 CGCGGTATGAATCTTAGTCGATCA 60.613 45.833 0.00 0.00 0.00 2.92
336 337 3.846896 CGCGGTATGAATCTTAGTCGATC 59.153 47.826 0.00 0.00 0.00 3.69
337 338 3.501062 TCGCGGTATGAATCTTAGTCGAT 59.499 43.478 6.13 0.00 0.00 3.59
338 339 2.874086 TCGCGGTATGAATCTTAGTCGA 59.126 45.455 6.13 0.00 0.00 4.20
339 340 3.263602 TCGCGGTATGAATCTTAGTCG 57.736 47.619 6.13 0.00 0.00 4.18
340 341 6.526566 AATTTCGCGGTATGAATCTTAGTC 57.473 37.500 6.13 0.00 0.00 2.59
341 342 6.537301 TGAAATTTCGCGGTATGAATCTTAGT 59.463 34.615 13.34 0.00 0.00 2.24
342 343 6.943981 TGAAATTTCGCGGTATGAATCTTAG 58.056 36.000 13.34 0.00 0.00 2.18
343 344 6.759356 TCTGAAATTTCGCGGTATGAATCTTA 59.241 34.615 13.34 0.00 0.00 2.10
344 345 5.584649 TCTGAAATTTCGCGGTATGAATCTT 59.415 36.000 13.34 0.00 0.00 2.40
345 346 5.116180 TCTGAAATTTCGCGGTATGAATCT 58.884 37.500 13.34 0.00 0.00 2.40
346 347 5.403897 TCTGAAATTTCGCGGTATGAATC 57.596 39.130 13.34 0.00 0.00 2.52
347 348 5.811399 TTCTGAAATTTCGCGGTATGAAT 57.189 34.783 13.34 0.00 0.00 2.57
348 349 5.811399 ATTCTGAAATTTCGCGGTATGAA 57.189 34.783 13.34 8.71 0.00 2.57
349 350 5.811399 AATTCTGAAATTTCGCGGTATGA 57.189 34.783 13.34 1.03 30.79 2.15
350 351 6.869421 AAAATTCTGAAATTTCGCGGTATG 57.131 33.333 13.34 0.00 42.82 2.39
395 396 8.629158 GCACCCATGTGAATAGTAAATTCATAA 58.371 33.333 3.93 0.00 45.76 1.90
396 397 7.041440 CGCACCCATGTGAATAGTAAATTCATA 60.041 37.037 3.93 2.21 45.76 2.15
397 398 6.238731 CGCACCCATGTGAATAGTAAATTCAT 60.239 38.462 3.93 0.00 45.76 2.57
398 399 5.065859 CGCACCCATGTGAATAGTAAATTCA 59.934 40.000 0.00 0.00 45.76 2.57
399 400 5.510671 CGCACCCATGTGAATAGTAAATTC 58.489 41.667 0.00 0.00 45.76 2.17
400 401 4.202010 GCGCACCCATGTGAATAGTAAATT 60.202 41.667 0.30 0.00 45.76 1.82
401 402 3.315191 GCGCACCCATGTGAATAGTAAAT 59.685 43.478 0.30 0.00 45.76 1.40
402 403 2.680841 GCGCACCCATGTGAATAGTAAA 59.319 45.455 0.30 0.00 45.76 2.01
403 404 2.285083 GCGCACCCATGTGAATAGTAA 58.715 47.619 0.30 0.00 45.76 2.24
404 405 1.804746 CGCGCACCCATGTGAATAGTA 60.805 52.381 8.75 0.00 45.76 1.82
405 406 1.089481 CGCGCACCCATGTGAATAGT 61.089 55.000 8.75 0.00 45.76 2.12
406 407 1.643292 CGCGCACCCATGTGAATAG 59.357 57.895 8.75 0.00 45.76 1.73
407 408 2.468670 GCGCGCACCCATGTGAATA 61.469 57.895 29.10 0.00 45.76 1.75
408 409 3.814268 GCGCGCACCCATGTGAAT 61.814 61.111 29.10 0.00 45.76 2.57
422 423 2.731587 AAAGTGAACATGGTGCGCGC 62.732 55.000 27.26 27.26 0.00 6.86
423 424 0.317770 AAAAGTGAACATGGTGCGCG 60.318 50.000 0.00 0.00 0.00 6.86
424 425 1.130955 CAAAAGTGAACATGGTGCGC 58.869 50.000 0.00 0.00 0.00 6.09
425 426 2.490328 ACAAAAGTGAACATGGTGCG 57.510 45.000 0.00 0.00 0.00 5.34
426 427 6.843069 AAAATACAAAAGTGAACATGGTGC 57.157 33.333 0.00 0.00 0.00 5.01
427 428 7.011295 AGCAAAAATACAAAAGTGAACATGGTG 59.989 33.333 0.00 0.00 0.00 4.17
428 429 7.047271 AGCAAAAATACAAAAGTGAACATGGT 58.953 30.769 0.00 0.00 0.00 3.55
429 430 7.481275 AGCAAAAATACAAAAGTGAACATGG 57.519 32.000 0.00 0.00 0.00 3.66
478 479 7.307493 TCTGGATCATCAATTTAACTCGTTG 57.693 36.000 0.00 0.00 0.00 4.10
480 481 7.106239 ACTTCTGGATCATCAATTTAACTCGT 58.894 34.615 0.00 0.00 0.00 4.18
528 529 5.685511 GGTGTAACACGAACGAAAGTAACTA 59.314 40.000 0.14 0.00 42.07 2.24
604 611 1.327764 GGATACTTCTTTTGGCTCGCG 59.672 52.381 0.00 0.00 0.00 5.87
675 1354 1.813513 GTGATGACACACAGGGAAGG 58.186 55.000 0.00 0.00 45.32 3.46
835 1534 1.391933 CGGACGGGTCTGATGGATCA 61.392 60.000 1.30 0.00 38.21 2.92
932 1657 2.147150 GCTGTTCACTTCTCTTGGTCC 58.853 52.381 0.00 0.00 0.00 4.46
997 1745 2.035632 CTGTCCCTGGTACTCCATCTC 58.964 57.143 0.00 0.00 43.43 2.75
1257 2079 7.360575 ACCAACGAGAAAAATCAGTATACAC 57.639 36.000 5.50 0.00 0.00 2.90
1446 2358 1.300963 CCATCCCAGTGTGACCCTG 59.699 63.158 0.00 0.00 0.00 4.45
1700 2612 3.719144 GTGCCGTGTTGCCCGTAC 61.719 66.667 0.00 0.00 0.00 3.67
1718 2630 1.446272 CTTCTTCTCGCCGGTGTCC 60.446 63.158 16.01 0.00 0.00 4.02
1985 2909 9.485206 AAAATTATACAGTGTAAACAGACGAGT 57.515 29.630 7.16 0.00 0.00 4.18
2009 2936 7.921745 CGGTTTAACCAGAAGGAAATTTACAAA 59.078 33.333 14.97 0.00 38.47 2.83
2142 3075 2.965671 ATATACTCCCTCCGAACGGA 57.034 50.000 15.13 15.13 42.90 4.69
2143 3076 5.649395 TGTAATATATACTCCCTCCGAACGG 59.351 44.000 6.94 6.94 0.00 4.44
2144 3077 6.373774 ACTGTAATATATACTCCCTCCGAACG 59.626 42.308 0.00 0.00 0.00 3.95
2145 3078 7.611079 AGACTGTAATATATACTCCCTCCGAAC 59.389 40.741 0.00 0.00 0.00 3.95
2146 3079 7.696981 AGACTGTAATATATACTCCCTCCGAA 58.303 38.462 0.00 0.00 0.00 4.30
2147 3080 7.268212 AGACTGTAATATATACTCCCTCCGA 57.732 40.000 0.00 0.00 0.00 4.55
2148 3081 8.045507 TGTAGACTGTAATATATACTCCCTCCG 58.954 40.741 0.00 0.00 0.00 4.63
2149 3082 9.750783 TTGTAGACTGTAATATATACTCCCTCC 57.249 37.037 0.00 0.00 0.00 4.30
2159 3092 8.701895 CCACTTCCCTTTGTAGACTGTAATATA 58.298 37.037 0.00 0.00 0.00 0.86
2160 3093 7.365652 CCCACTTCCCTTTGTAGACTGTAATAT 60.366 40.741 0.00 0.00 0.00 1.28
2161 3094 6.070424 CCCACTTCCCTTTGTAGACTGTAATA 60.070 42.308 0.00 0.00 0.00 0.98
2162 3095 5.280521 CCCACTTCCCTTTGTAGACTGTAAT 60.281 44.000 0.00 0.00 0.00 1.89
2163 3096 4.041198 CCCACTTCCCTTTGTAGACTGTAA 59.959 45.833 0.00 0.00 0.00 2.41
2164 3097 3.581332 CCCACTTCCCTTTGTAGACTGTA 59.419 47.826 0.00 0.00 0.00 2.74
2165 3098 2.372172 CCCACTTCCCTTTGTAGACTGT 59.628 50.000 0.00 0.00 0.00 3.55
2166 3099 2.637872 TCCCACTTCCCTTTGTAGACTG 59.362 50.000 0.00 0.00 0.00 3.51
2167 3100 2.986050 TCCCACTTCCCTTTGTAGACT 58.014 47.619 0.00 0.00 0.00 3.24
2168 3101 3.072622 ACTTCCCACTTCCCTTTGTAGAC 59.927 47.826 0.00 0.00 0.00 2.59
2169 3102 3.323775 ACTTCCCACTTCCCTTTGTAGA 58.676 45.455 0.00 0.00 0.00 2.59
2170 3103 3.790089 ACTTCCCACTTCCCTTTGTAG 57.210 47.619 0.00 0.00 0.00 2.74
2171 3104 3.435890 CCAACTTCCCACTTCCCTTTGTA 60.436 47.826 0.00 0.00 0.00 2.41
2172 3105 2.666317 CAACTTCCCACTTCCCTTTGT 58.334 47.619 0.00 0.00 0.00 2.83
2173 3106 1.963515 CCAACTTCCCACTTCCCTTTG 59.036 52.381 0.00 0.00 0.00 2.77
2174 3107 1.573857 ACCAACTTCCCACTTCCCTTT 59.426 47.619 0.00 0.00 0.00 3.11
2175 3108 1.133482 CACCAACTTCCCACTTCCCTT 60.133 52.381 0.00 0.00 0.00 3.95
2176 3109 0.478507 CACCAACTTCCCACTTCCCT 59.521 55.000 0.00 0.00 0.00 4.20
2177 3110 0.539669 CCACCAACTTCCCACTTCCC 60.540 60.000 0.00 0.00 0.00 3.97
2178 3111 1.179174 GCCACCAACTTCCCACTTCC 61.179 60.000 0.00 0.00 0.00 3.46
2179 3112 0.467290 TGCCACCAACTTCCCACTTC 60.467 55.000 0.00 0.00 0.00 3.01
2180 3113 0.468029 CTGCCACCAACTTCCCACTT 60.468 55.000 0.00 0.00 0.00 3.16
2181 3114 1.151450 CTGCCACCAACTTCCCACT 59.849 57.895 0.00 0.00 0.00 4.00
2182 3115 0.467290 TTCTGCCACCAACTTCCCAC 60.467 55.000 0.00 0.00 0.00 4.61
2183 3116 0.467290 GTTCTGCCACCAACTTCCCA 60.467 55.000 0.00 0.00 0.00 4.37
2184 3117 1.179174 GGTTCTGCCACCAACTTCCC 61.179 60.000 0.00 0.00 36.73 3.97
2185 3118 1.515521 CGGTTCTGCCACCAACTTCC 61.516 60.000 0.00 0.00 36.49 3.46
2186 3119 1.515521 CCGGTTCTGCCACCAACTTC 61.516 60.000 0.00 0.00 36.49 3.01
2187 3120 1.528309 CCGGTTCTGCCACCAACTT 60.528 57.895 0.00 0.00 36.49 2.66
2188 3121 2.113139 CCGGTTCTGCCACCAACT 59.887 61.111 0.00 0.00 36.49 3.16
2189 3122 3.670377 GCCGGTTCTGCCACCAAC 61.670 66.667 1.90 0.00 36.49 3.77
2196 3129 1.675641 ATCACAAGGCCGGTTCTGC 60.676 57.895 1.90 0.00 0.00 4.26
2197 3130 0.321564 TCATCACAAGGCCGGTTCTG 60.322 55.000 1.90 0.00 0.00 3.02
2198 3131 0.400213 TTCATCACAAGGCCGGTTCT 59.600 50.000 1.90 0.00 0.00 3.01
2199 3132 1.068541 GTTTCATCACAAGGCCGGTTC 60.069 52.381 1.90 0.00 0.00 3.62
2200 3133 0.958822 GTTTCATCACAAGGCCGGTT 59.041 50.000 1.90 0.00 0.00 4.44
2201 3134 0.893727 GGTTTCATCACAAGGCCGGT 60.894 55.000 1.90 0.00 0.00 5.28
2202 3135 1.883021 GGTTTCATCACAAGGCCGG 59.117 57.895 0.00 0.00 0.00 6.13
2236 3169 2.420022 CCAAATACGGAAACAGAGGCAG 59.580 50.000 0.00 0.00 0.00 4.85
2261 3194 8.980481 TCTTCTTTTTGTAGAACCTTCTGAAT 57.020 30.769 0.00 0.00 38.19 2.57
2302 3235 9.005777 GGTATTGTGTATTCACTGGTCTTAAAA 57.994 33.333 4.01 0.00 44.14 1.52
2304 3237 7.681679 TGGTATTGTGTATTCACTGGTCTTAA 58.318 34.615 4.01 0.00 44.14 1.85
2391 3324 7.028962 CGCTCTGTGGAATTTGATCAATAAAA 58.971 34.615 9.40 0.00 0.00 1.52
2412 3345 2.101582 ACCTGAGATGTATTCCACGCTC 59.898 50.000 0.00 0.00 33.85 5.03
2413 3346 2.111384 ACCTGAGATGTATTCCACGCT 58.889 47.619 0.00 0.00 0.00 5.07
2414 3347 2.604046 ACCTGAGATGTATTCCACGC 57.396 50.000 0.00 0.00 0.00 5.34
2415 3348 4.123497 TCAACCTGAGATGTATTCCACG 57.877 45.455 0.00 0.00 0.00 4.94
2430 3363 0.540365 CCATGTGGCTGGTTCAACCT 60.540 55.000 8.40 0.00 39.58 3.50
2457 3394 7.697691 AGCTAAATTTTCACATTCGATAGGTG 58.302 34.615 0.00 5.54 0.00 4.00
2463 3400 7.491372 ACGATCTAGCTAAATTTTCACATTCGA 59.509 33.333 0.00 0.00 0.00 3.71
2471 3408 6.049790 AGGGTCACGATCTAGCTAAATTTTC 58.950 40.000 0.00 0.00 0.00 2.29
2476 3413 3.899726 AGAGGGTCACGATCTAGCTAAA 58.100 45.455 0.00 0.00 0.00 1.85
2482 3419 6.380274 AGACAAATAAAGAGGGTCACGATCTA 59.620 38.462 0.00 0.00 0.00 1.98
2487 3424 4.822026 AGAGACAAATAAAGAGGGTCACG 58.178 43.478 0.00 0.00 0.00 4.35
2492 3429 6.800072 AGGTAGAGAGACAAATAAAGAGGG 57.200 41.667 0.00 0.00 0.00 4.30
2528 3465 9.415544 GCTTAGTGCTACTAGTTTTAGTTGTAA 57.584 33.333 0.00 0.00 40.55 2.41
2529 3466 8.976986 GCTTAGTGCTACTAGTTTTAGTTGTA 57.023 34.615 0.00 0.00 40.55 2.41
2530 3467 7.886405 GCTTAGTGCTACTAGTTTTAGTTGT 57.114 36.000 0.00 0.00 40.55 3.32
2569 3510 5.782845 ACTTCAGAGGAGATTTGGTAGTCTT 59.217 40.000 0.00 0.00 0.00 3.01
2571 3512 5.669164 ACTTCAGAGGAGATTTGGTAGTC 57.331 43.478 0.00 0.00 0.00 2.59
2576 3517 6.881065 TCATTGTTACTTCAGAGGAGATTTGG 59.119 38.462 0.00 0.00 0.00 3.28
2579 3520 7.684529 ACTTCATTGTTACTTCAGAGGAGATT 58.315 34.615 0.00 0.00 0.00 2.40
2586 3527 7.066887 TCTGCAAAACTTCATTGTTACTTCAGA 59.933 33.333 0.00 0.00 0.00 3.27
2587 3528 7.195646 TCTGCAAAACTTCATTGTTACTTCAG 58.804 34.615 0.00 0.00 0.00 3.02
2589 3530 6.142958 GCTCTGCAAAACTTCATTGTTACTTC 59.857 38.462 0.00 0.00 0.00 3.01
2590 3531 5.979517 GCTCTGCAAAACTTCATTGTTACTT 59.020 36.000 0.00 0.00 0.00 2.24
2591 3532 5.067674 TGCTCTGCAAAACTTCATTGTTACT 59.932 36.000 0.00 0.00 34.76 2.24
2592 3533 5.280945 TGCTCTGCAAAACTTCATTGTTAC 58.719 37.500 0.00 0.00 34.76 2.50
2593 3534 5.299028 TCTGCTCTGCAAAACTTCATTGTTA 59.701 36.000 0.00 0.00 38.41 2.41
2600 3582 2.481952 ACGATCTGCTCTGCAAAACTTC 59.518 45.455 0.00 0.00 38.41 3.01
2635 3617 3.136123 CCATTGCGTGCAGGGAGG 61.136 66.667 8.72 0.00 0.00 4.30
2643 3625 1.164411 TACTTGGAAGCCATTGCGTG 58.836 50.000 0.00 0.00 44.33 5.34
2658 3640 6.486657 TCTGCTCTGCAAAACTAACAATACTT 59.513 34.615 0.00 0.00 38.41 2.24
2659 3641 5.997746 TCTGCTCTGCAAAACTAACAATACT 59.002 36.000 0.00 0.00 38.41 2.12
2660 3642 6.241207 TCTGCTCTGCAAAACTAACAATAC 57.759 37.500 0.00 0.00 38.41 1.89
2661 3643 6.183360 CGATCTGCTCTGCAAAACTAACAATA 60.183 38.462 0.00 0.00 38.41 1.90
2662 3644 5.391310 CGATCTGCTCTGCAAAACTAACAAT 60.391 40.000 0.00 0.00 38.41 2.71
2663 3645 4.083855 CGATCTGCTCTGCAAAACTAACAA 60.084 41.667 0.00 0.00 38.41 2.83
2664 3646 3.433274 CGATCTGCTCTGCAAAACTAACA 59.567 43.478 0.00 0.00 38.41 2.41
2665 3647 3.433615 ACGATCTGCTCTGCAAAACTAAC 59.566 43.478 0.00 0.00 38.41 2.34
2666 3648 3.664107 ACGATCTGCTCTGCAAAACTAA 58.336 40.909 0.00 0.00 38.41 2.24
2667 3649 3.056536 AGACGATCTGCTCTGCAAAACTA 60.057 43.478 0.00 0.00 38.41 2.24
2668 3650 2.072298 GACGATCTGCTCTGCAAAACT 58.928 47.619 0.00 0.00 38.41 2.66
2669 3651 2.072298 AGACGATCTGCTCTGCAAAAC 58.928 47.619 0.00 0.00 38.41 2.43
2670 3652 2.071540 CAGACGATCTGCTCTGCAAAA 58.928 47.619 0.00 0.00 37.72 2.44
2671 3653 1.718396 CAGACGATCTGCTCTGCAAA 58.282 50.000 0.00 0.00 37.72 3.68
2672 3654 3.430779 CAGACGATCTGCTCTGCAA 57.569 52.632 0.00 0.00 37.72 4.08
2680 3662 2.857152 GCACTCTTTAGCAGACGATCTG 59.143 50.000 9.73 9.73 46.90 2.90
2681 3663 2.159170 GGCACTCTTTAGCAGACGATCT 60.159 50.000 0.00 0.00 0.00 2.75
2682 3664 2.159170 AGGCACTCTTTAGCAGACGATC 60.159 50.000 0.00 0.00 0.00 3.69
2683 3665 1.827969 AGGCACTCTTTAGCAGACGAT 59.172 47.619 0.00 0.00 0.00 3.73
2684 3666 1.257743 AGGCACTCTTTAGCAGACGA 58.742 50.000 0.00 0.00 0.00 4.20
2685 3667 3.822607 AGGCACTCTTTAGCAGACG 57.177 52.632 0.00 0.00 0.00 4.18
2699 3681 1.604308 CATTGTGTGCAGGGAGGCA 60.604 57.895 0.00 0.00 42.53 4.75
2700 3682 2.345760 CCATTGTGTGCAGGGAGGC 61.346 63.158 0.00 0.00 0.00 4.70
2701 3683 2.345760 GCCATTGTGTGCAGGGAGG 61.346 63.158 0.00 0.00 0.00 4.30
2702 3684 0.896940 AAGCCATTGTGTGCAGGGAG 60.897 55.000 0.00 0.00 0.00 4.30
2703 3685 0.469705 AAAGCCATTGTGTGCAGGGA 60.470 50.000 0.00 0.00 0.00 4.20
2704 3686 0.393820 AAAAGCCATTGTGTGCAGGG 59.606 50.000 0.00 0.00 0.00 4.45
2705 3687 3.243839 ACTTAAAAGCCATTGTGTGCAGG 60.244 43.478 0.00 0.00 0.00 4.85
2706 3688 3.981211 ACTTAAAAGCCATTGTGTGCAG 58.019 40.909 0.00 0.00 0.00 4.41
2707 3689 5.720371 ATACTTAAAAGCCATTGTGTGCA 57.280 34.783 0.00 0.00 0.00 4.57
2708 3690 5.925969 ACAATACTTAAAAGCCATTGTGTGC 59.074 36.000 16.47 0.00 40.51 4.57
2709 3691 7.651304 TCAACAATACTTAAAAGCCATTGTGTG 59.349 33.333 17.32 16.31 40.84 3.82
2710 3692 7.721402 TCAACAATACTTAAAAGCCATTGTGT 58.279 30.769 17.32 9.59 40.84 3.72
2711 3693 8.586570 TTCAACAATACTTAAAAGCCATTGTG 57.413 30.769 17.32 13.35 40.84 3.33
2712 3694 9.423061 GATTCAACAATACTTAAAAGCCATTGT 57.577 29.630 13.48 13.48 42.22 2.71
2713 3695 9.421806 TGATTCAACAATACTTAAAAGCCATTG 57.578 29.630 12.59 12.59 37.58 2.82
2714 3696 9.423061 GTGATTCAACAATACTTAAAAGCCATT 57.577 29.630 0.00 0.00 0.00 3.16
2715 3697 7.754924 CGTGATTCAACAATACTTAAAAGCCAT 59.245 33.333 0.00 0.00 0.00 4.40
2716 3698 7.081349 CGTGATTCAACAATACTTAAAAGCCA 58.919 34.615 0.00 0.00 0.00 4.75
2717 3699 6.526674 CCGTGATTCAACAATACTTAAAAGCC 59.473 38.462 0.00 0.00 0.00 4.35
2718 3700 7.302524 TCCGTGATTCAACAATACTTAAAAGC 58.697 34.615 0.00 0.00 0.00 3.51
2719 3701 9.277565 CATCCGTGATTCAACAATACTTAAAAG 57.722 33.333 0.00 0.00 0.00 2.27
2720 3702 7.753132 GCATCCGTGATTCAACAATACTTAAAA 59.247 33.333 0.00 0.00 0.00 1.52
2721 3703 7.247728 GCATCCGTGATTCAACAATACTTAAA 58.752 34.615 0.00 0.00 0.00 1.52
2722 3704 6.183360 GGCATCCGTGATTCAACAATACTTAA 60.183 38.462 0.00 0.00 0.00 1.85
2723 3705 5.295787 GGCATCCGTGATTCAACAATACTTA 59.704 40.000 0.00 0.00 0.00 2.24
2724 3706 4.096382 GGCATCCGTGATTCAACAATACTT 59.904 41.667 0.00 0.00 0.00 2.24
2756 3738 1.346722 ACTACTTGGGGACTTCGTTGG 59.653 52.381 0.00 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.