Multiple sequence alignment - TraesCS6D01G317500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G317500 chr6D 100.000 6568 0 0 1 6568 426098393 426104960 0.000000e+00 12129.0
1 TraesCS6D01G317500 chr6D 91.832 453 35 2 1829 2280 461538458 461538007 1.200000e-176 630.0
2 TraesCS6D01G317500 chr6D 77.950 322 34 16 496 788 85792249 85791936 4.070000e-37 167.0
3 TraesCS6D01G317500 chr6A 96.479 4033 108 9 2281 6291 571020851 571024871 0.000000e+00 6630.0
4 TraesCS6D01G317500 chr6A 88.701 1894 124 47 1 1823 571018974 571020848 0.000000e+00 2230.0
5 TraesCS6D01G317500 chr6A 99.024 205 2 0 6363 6567 571025051 571025255 1.040000e-97 368.0
6 TraesCS6D01G317500 chr6A 92.727 55 4 0 6303 6357 571024782 571024836 5.460000e-11 80.5
7 TraesCS6D01G317500 chr6B 97.283 3349 87 4 2280 5626 641395660 641399006 0.000000e+00 5677.0
8 TraesCS6D01G317500 chr6B 90.853 1126 91 7 3281 4400 82743855 82742736 0.000000e+00 1498.0
9 TraesCS6D01G317500 chr6B 90.713 1066 37 24 789 1823 641394624 641395658 0.000000e+00 1363.0
10 TraesCS6D01G317500 chr6B 94.005 734 26 3 5851 6568 641400606 641401337 0.000000e+00 1096.0
11 TraesCS6D01G317500 chr6B 88.976 635 65 4 2338 2970 82744482 82743851 0.000000e+00 780.0
12 TraesCS6D01G317500 chr6B 81.967 854 77 37 1 788 641393403 641394245 0.000000e+00 652.0
13 TraesCS6D01G317500 chr6B 83.227 626 93 9 871 1493 82746425 82745809 1.240000e-156 564.0
14 TraesCS6D01G317500 chr6B 95.122 287 10 1 5582 5864 641399017 641399303 3.610000e-122 449.0
15 TraesCS6D01G317500 chr6B 75.934 241 38 13 479 705 544394136 544394370 9.010000e-19 106.0
16 TraesCS6D01G317500 chr6B 94.545 55 3 0 6303 6357 641400973 641401027 1.170000e-12 86.1
17 TraesCS6D01G317500 chr7D 88.901 2865 268 30 2776 5635 39710652 39713471 0.000000e+00 3483.0
18 TraesCS6D01G317500 chr7D 86.230 886 109 6 4688 5572 40001876 40002749 0.000000e+00 948.0
19 TraesCS6D01G317500 chr7D 86.447 819 102 7 3989 4807 39633800 39634609 0.000000e+00 889.0
20 TraesCS6D01G317500 chr7D 92.188 512 39 1 5194 5705 39635337 39635847 0.000000e+00 723.0
21 TraesCS6D01G317500 chr7D 93.069 303 20 1 2469 2771 39705320 39705621 6.040000e-120 442.0
22 TraesCS6D01G317500 chr7D 91.228 285 25 0 4854 5138 39635060 39635344 7.990000e-104 388.0
23 TraesCS6D01G317500 chr7D 85.714 343 36 10 867 1205 39722978 39723311 3.770000e-92 350.0
24 TraesCS6D01G317500 chr7D 89.324 281 23 4 5676 5950 39729217 39729496 4.880000e-91 346.0
25 TraesCS6D01G317500 chr7D 89.912 228 12 6 2438 2657 39723810 39724034 3.880000e-72 283.0
26 TraesCS6D01G317500 chr7D 80.851 188 24 7 5650 5837 40002779 40002954 3.190000e-28 137.0
27 TraesCS6D01G317500 chr7D 80.822 146 18 6 4494 4631 15934324 15934467 9.010000e-19 106.0
28 TraesCS6D01G317500 chr7A 91.049 1955 161 8 2518 4463 39587583 39589532 0.000000e+00 2628.0
29 TraesCS6D01G317500 chr7A 88.904 1496 129 14 4471 5939 39592145 39593630 0.000000e+00 1808.0
30 TraesCS6D01G317500 chr7A 91.216 148 13 0 6002 6149 39593647 39593794 1.120000e-47 202.0
31 TraesCS6D01G317500 chr4A 87.811 1731 165 17 4406 6125 645860409 645862104 0.000000e+00 1986.0
32 TraesCS6D01G317500 chr4A 75.325 308 34 19 517 788 68560822 68560521 6.960000e-20 110.0
33 TraesCS6D01G317500 chr2A 95.575 452 19 1 1830 2280 565450285 565449834 0.000000e+00 723.0
34 TraesCS6D01G317500 chr2A 89.224 464 35 10 1828 2280 239402935 239402476 3.440000e-157 566.0
35 TraesCS6D01G317500 chr5B 94.714 454 24 0 1827 2280 678132136 678131683 0.000000e+00 706.0
36 TraesCS6D01G317500 chr5B 93.421 456 30 0 1825 2280 115628723 115629178 0.000000e+00 676.0
37 TraesCS6D01G317500 chr5B 79.213 178 27 5 1637 1807 547281852 547282026 1.500000e-21 115.0
38 TraesCS6D01G317500 chr5A 89.655 464 38 9 1827 2280 535117891 535118354 3.410000e-162 582.0
39 TraesCS6D01G317500 chr5A 83.616 177 19 5 1637 1807 566219274 566219446 2.450000e-34 158.0
40 TraesCS6D01G317500 chrUn 87.033 455 52 6 1828 2280 297791293 297790844 2.110000e-139 507.0
41 TraesCS6D01G317500 chrUn 87.033 455 52 6 1828 2280 397090375 397089926 2.110000e-139 507.0
42 TraesCS6D01G317500 chrUn 86.813 455 53 6 1828 2280 42521953 42521504 9.830000e-138 501.0
43 TraesCS6D01G317500 chr2D 86.017 236 24 8 3 235 2246739 2246510 1.830000e-60 244.0
44 TraesCS6D01G317500 chr2D 77.880 217 36 7 484 690 364673487 364673273 2.490000e-24 124.0
45 TraesCS6D01G317500 chr2D 74.636 343 45 20 484 788 364832072 364831734 5.380000e-21 113.0
46 TraesCS6D01G317500 chr4D 79.141 326 45 14 483 788 487060675 487060997 3.100000e-48 204.0
47 TraesCS6D01G317500 chr4D 80.973 226 38 5 2 223 53738916 53739140 2.430000e-39 174.0
48 TraesCS6D01G317500 chr4D 74.487 341 45 19 484 788 387080988 387080654 6.960000e-20 110.0
49 TraesCS6D01G317500 chr1D 84.831 178 24 3 260 436 467144763 467144588 6.770000e-40 176.0
50 TraesCS6D01G317500 chr2B 81.951 205 34 3 232 434 10191714 10191917 3.150000e-38 171.0
51 TraesCS6D01G317500 chr2B 81.863 204 34 3 236 437 41410572 41410774 1.130000e-37 169.0
52 TraesCS6D01G317500 chr2B 77.778 216 36 8 484 690 432895735 432895523 8.940000e-24 122.0
53 TraesCS6D01G317500 chr3B 82.160 213 20 12 484 682 2341168 2340960 4.070000e-37 167.0
54 TraesCS6D01G317500 chr3D 82.270 141 17 5 4497 4631 584861171 584861033 1.500000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G317500 chr6D 426098393 426104960 6567 False 12129.000000 12129 100.000000 1 6568 1 chr6D.!!$F1 6567
1 TraesCS6D01G317500 chr6A 571018974 571025255 6281 False 2327.125000 6630 94.232750 1 6567 4 chr6A.!!$F1 6566
2 TraesCS6D01G317500 chr6B 641393403 641401337 7934 False 1553.850000 5677 92.272500 1 6568 6 chr6B.!!$F2 6567
3 TraesCS6D01G317500 chr6B 82742736 82746425 3689 True 947.333333 1498 87.685333 871 4400 3 chr6B.!!$R1 3529
4 TraesCS6D01G317500 chr7D 39710652 39713471 2819 False 3483.000000 3483 88.901000 2776 5635 1 chr7D.!!$F3 2859
5 TraesCS6D01G317500 chr7D 39633800 39635847 2047 False 666.666667 889 89.954333 3989 5705 3 chr7D.!!$F5 1716
6 TraesCS6D01G317500 chr7D 40001876 40002954 1078 False 542.500000 948 83.540500 4688 5837 2 chr7D.!!$F7 1149
7 TraesCS6D01G317500 chr7D 39722978 39724034 1056 False 316.500000 350 87.813000 867 2657 2 chr7D.!!$F6 1790
8 TraesCS6D01G317500 chr7A 39587583 39593794 6211 False 1546.000000 2628 90.389667 2518 6149 3 chr7A.!!$F1 3631
9 TraesCS6D01G317500 chr4A 645860409 645862104 1695 False 1986.000000 1986 87.811000 4406 6125 1 chr4A.!!$F1 1719

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
479 496 0.112218 TGCTGCCCCACTTACACATT 59.888 50.0 0.00 0.00 0.00 2.71 F
1886 3536 0.036164 AACCGCCAAGAGCACACATA 59.964 50.0 0.00 0.00 44.04 2.29 F
2168 3818 0.031449 GCCGCCAAAGTTGCAAGTAA 59.969 50.0 7.33 0.00 0.00 2.24 F
3272 4974 0.107508 GGGAAGACATAGCTGCAGCA 60.108 55.0 38.24 24.73 45.16 4.41 F
3471 5173 1.097232 CTGCAAAAGCGGGATGATCA 58.903 50.0 0.00 0.00 0.00 2.92 F
4157 5862 0.729116 CTGCTACCAATCCTTGTGCG 59.271 55.0 0.00 0.00 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 3799 0.031449 TTACTTGCAACTTTGGCGGC 59.969 50.000 0.00 0.00 0.00 6.53 R
3213 4915 0.889306 AGAGCGCCGTAAGAGAACTT 59.111 50.000 2.29 0.00 43.02 2.66 R
3970 5673 0.811616 GCATTGTAGACAGGCCCTCG 60.812 60.000 0.00 0.00 0.00 4.63 R
4157 5862 1.173913 AGCGCCTCACCAAATTTACC 58.826 50.000 2.29 0.00 0.00 2.85 R
5046 9771 1.734137 CTTCATCATGCAGCCTGGC 59.266 57.895 11.65 11.65 0.00 4.85 R
5985 12104 0.995024 AGCCTAAGCATTCACCCTGT 59.005 50.000 0.00 0.00 43.56 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.890371 GTCCGCCATGTAGGACGT 59.110 61.111 17.50 0.00 46.08 4.34
83 85 5.913137 TCTTTCTCTCTCTTCATCTCCAC 57.087 43.478 0.00 0.00 0.00 4.02
114 116 4.036027 GTGCAAGTGATTGGACATATGAGG 59.964 45.833 10.38 0.00 41.96 3.86
163 166 5.190992 ACGGACAAATAAGGGTTCAAAAC 57.809 39.130 0.00 0.00 0.00 2.43
164 168 4.645588 ACGGACAAATAAGGGTTCAAAACA 59.354 37.500 0.00 0.00 0.00 2.83
207 211 1.879430 GCGTCTGCGGGCGTTTATA 60.879 57.895 22.29 0.00 38.78 0.98
212 216 0.463116 CTGCGGGCGTTTATAGGGTT 60.463 55.000 0.00 0.00 0.00 4.11
280 296 6.516718 ACATTAGGTGAGATCAATAAGGTCG 58.483 40.000 0.00 0.00 0.00 4.79
281 297 5.531122 TTAGGTGAGATCAATAAGGTCGG 57.469 43.478 0.00 0.00 0.00 4.79
282 298 2.700897 AGGTGAGATCAATAAGGTCGGG 59.299 50.000 0.00 0.00 0.00 5.14
347 363 8.868522 AATTGAAGACAGTCATCCAATCTTTA 57.131 30.769 2.66 0.00 29.85 1.85
388 404 6.963322 AGTTCCAGCTCCTAATTCAAACTAT 58.037 36.000 0.00 0.00 0.00 2.12
479 496 0.112218 TGCTGCCCCACTTACACATT 59.888 50.000 0.00 0.00 0.00 2.71
494 511 3.206150 ACACATTATGGAGAATGGCGTC 58.794 45.455 0.00 0.00 40.50 5.19
515 532 0.689055 TGGCTCTCAAGAGTGCATGT 59.311 50.000 21.29 0.00 46.44 3.21
603 647 6.656314 AGATGTTCGTGTTAATATCGCAAA 57.344 33.333 0.00 0.00 33.57 3.68
608 652 6.128526 TGTTCGTGTTAATATCGCAAACATCA 60.129 34.615 0.00 0.00 35.72 3.07
611 655 6.904543 TCGTGTTAATATCGCAAACATCATTG 59.095 34.615 0.00 0.00 35.72 2.82
621 665 7.474398 TCGCAAACATCATTGAAAAATTTCA 57.526 28.000 4.52 4.52 44.78 2.69
624 668 7.201199 CGCAAACATCATTGAAAAATTTCATGC 60.201 33.333 9.23 11.50 45.65 4.06
626 670 7.655236 AACATCATTGAAAAATTTCATGCGA 57.345 28.000 9.23 7.02 45.65 5.10
638 682 4.844998 TTTCATGCGAAATGGAGTTTCA 57.155 36.364 0.00 0.00 45.24 2.69
639 683 3.829886 TCATGCGAAATGGAGTTTCAC 57.170 42.857 0.00 0.00 45.24 3.18
640 684 2.487762 TCATGCGAAATGGAGTTTCACC 59.512 45.455 0.00 0.00 45.24 4.02
641 685 0.871722 TGCGAAATGGAGTTTCACCG 59.128 50.000 0.00 0.00 45.24 4.94
642 686 0.168128 GCGAAATGGAGTTTCACCGG 59.832 55.000 0.00 0.00 45.24 5.28
684 736 9.774742 GGATGACATTTTAGAGTAACATTTGTC 57.225 33.333 0.00 0.00 33.37 3.18
747 817 4.216257 GCATTGGATGTGACAAAGTACACT 59.784 41.667 0.00 0.00 37.81 3.55
748 818 5.617751 GCATTGGATGTGACAAAGTACACTC 60.618 44.000 0.00 0.00 37.81 3.51
829 1277 6.585702 TGCGATATCATTTGTTTTTCCAACTG 59.414 34.615 3.12 0.00 0.00 3.16
842 1290 1.252904 CCAACTGGCTGATTGGGGTG 61.253 60.000 13.84 0.00 41.52 4.61
847 1295 1.753073 CTGGCTGATTGGGGTGAATTC 59.247 52.381 0.00 0.00 0.00 2.17
895 1343 3.446161 TGACCCAGATAGTTACCTTCACG 59.554 47.826 0.00 0.00 0.00 4.35
1590 3211 4.256090 GCCCCGATGCGATGTTGC 62.256 66.667 0.00 0.00 0.00 4.17
1642 3274 1.467734 AGCTGAAAATTCTGAGCGCTG 59.532 47.619 18.48 0.00 33.06 5.18
1709 3349 6.738114 TCATTGTTGTTCATCTTGGTTCTTC 58.262 36.000 0.00 0.00 0.00 2.87
1710 3350 5.514274 TTGTTGTTCATCTTGGTTCTTCC 57.486 39.130 0.00 0.00 0.00 3.46
1716 3357 8.360390 GTTGTTCATCTTGGTTCTTCCTTATTT 58.640 33.333 0.00 0.00 37.07 1.40
1725 3366 7.745620 TGGTTCTTCCTTATTTTCAGACTTC 57.254 36.000 0.00 0.00 37.07 3.01
1754 3396 4.497473 TGGAACAATGTCGGTCATTTTC 57.503 40.909 0.00 6.20 43.33 2.29
1755 3397 3.885901 TGGAACAATGTCGGTCATTTTCA 59.114 39.130 16.15 2.85 43.33 2.69
1756 3398 4.339530 TGGAACAATGTCGGTCATTTTCAA 59.660 37.500 16.15 8.81 43.33 2.69
1757 3399 5.163509 TGGAACAATGTCGGTCATTTTCAAA 60.164 36.000 16.15 8.02 43.33 2.69
1758 3400 5.751028 GGAACAATGTCGGTCATTTTCAAAA 59.249 36.000 16.15 0.00 43.33 2.44
1759 3401 6.423604 GGAACAATGTCGGTCATTTTCAAAAT 59.576 34.615 16.15 0.00 43.33 1.82
1776 3426 9.752274 TTTTCAAAATTCACTCGTTTTTCATTG 57.248 25.926 0.00 0.00 0.00 2.82
1811 3461 7.100409 AGTTTTGGATGGAACTTTTCGAAAAA 58.900 30.769 22.67 9.34 32.43 1.94
1813 3463 4.939271 TGGATGGAACTTTTCGAAAAACC 58.061 39.130 22.67 22.74 0.00 3.27
1814 3464 3.978855 GGATGGAACTTTTCGAAAAACCG 59.021 43.478 22.67 14.34 0.00 4.44
1815 3465 4.261280 GGATGGAACTTTTCGAAAAACCGA 60.261 41.667 22.67 15.62 36.70 4.69
1816 3466 4.698583 TGGAACTTTTCGAAAAACCGAA 57.301 36.364 22.67 7.64 45.45 4.30
1818 3468 5.652518 TGGAACTTTTCGAAAAACCGAATT 58.347 33.333 22.67 10.93 46.21 2.17
1819 3469 6.100668 TGGAACTTTTCGAAAAACCGAATTT 58.899 32.000 22.67 8.44 46.21 1.82
1820 3470 6.253942 TGGAACTTTTCGAAAAACCGAATTTC 59.746 34.615 22.67 14.83 46.21 2.17
1831 3481 6.996562 AAAACCGAATTTCGTCAATTTACC 57.003 33.333 16.89 0.00 38.40 2.85
1833 3483 3.995705 ACCGAATTTCGTCAATTTACCGA 59.004 39.130 16.89 0.00 38.40 4.69
1834 3484 4.451774 ACCGAATTTCGTCAATTTACCGAA 59.548 37.500 16.89 0.00 38.40 4.30
1840 3490 4.149910 TCGTCAATTTACCGAAAAAGGC 57.850 40.909 0.00 0.00 33.69 4.35
1841 3491 3.816523 TCGTCAATTTACCGAAAAAGGCT 59.183 39.130 0.00 0.00 33.69 4.58
1842 3492 4.276431 TCGTCAATTTACCGAAAAAGGCTT 59.724 37.500 0.00 0.00 33.69 4.35
1843 3493 4.979815 CGTCAATTTACCGAAAAAGGCTTT 59.020 37.500 6.68 6.68 33.69 3.51
1844 3494 5.116528 CGTCAATTTACCGAAAAAGGCTTTC 59.883 40.000 13.76 0.41 33.69 2.62
1846 3496 2.691984 TTACCGAAAAAGGCTTTCGC 57.308 45.000 13.76 7.41 46.89 4.70
1856 3506 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
1857 3507 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
1858 3508 1.018910 GCTTTCGCCCCGCTTTATAA 58.981 50.000 0.00 0.00 0.00 0.98
1859 3509 1.402613 GCTTTCGCCCCGCTTTATAAA 59.597 47.619 0.00 0.00 0.00 1.40
1860 3510 2.034179 GCTTTCGCCCCGCTTTATAAAT 59.966 45.455 0.00 0.00 0.00 1.40
1861 3511 3.251487 GCTTTCGCCCCGCTTTATAAATA 59.749 43.478 0.00 0.00 0.00 1.40
1862 3512 4.261280 GCTTTCGCCCCGCTTTATAAATAA 60.261 41.667 0.00 0.00 0.00 1.40
1863 3513 5.733937 GCTTTCGCCCCGCTTTATAAATAAA 60.734 40.000 0.00 0.00 0.00 1.40
1875 3525 7.820044 CTTTATAAATAAAGCAAACCGCCAA 57.180 32.000 9.01 0.00 41.69 4.52
1876 3526 7.820044 TTTATAAATAAAGCAAACCGCCAAG 57.180 32.000 0.00 0.00 44.04 3.61
1877 3527 5.652994 ATAAATAAAGCAAACCGCCAAGA 57.347 34.783 0.00 0.00 44.04 3.02
1878 3528 3.575965 AATAAAGCAAACCGCCAAGAG 57.424 42.857 0.00 0.00 44.04 2.85
1879 3529 0.596082 TAAAGCAAACCGCCAAGAGC 59.404 50.000 0.00 0.00 44.04 4.09
1880 3530 1.391157 AAAGCAAACCGCCAAGAGCA 61.391 50.000 0.00 0.00 44.04 4.26
1881 3531 2.050077 GCAAACCGCCAAGAGCAC 60.050 61.111 0.00 0.00 44.04 4.40
1882 3532 2.844451 GCAAACCGCCAAGAGCACA 61.844 57.895 0.00 0.00 44.04 4.57
1883 3533 1.008538 CAAACCGCCAAGAGCACAC 60.009 57.895 0.00 0.00 44.04 3.82
1884 3534 1.453015 AAACCGCCAAGAGCACACA 60.453 52.632 0.00 0.00 44.04 3.72
1885 3535 0.823356 AAACCGCCAAGAGCACACAT 60.823 50.000 0.00 0.00 44.04 3.21
1886 3536 0.036164 AACCGCCAAGAGCACACATA 59.964 50.000 0.00 0.00 44.04 2.29
1887 3537 0.673644 ACCGCCAAGAGCACACATAC 60.674 55.000 0.00 0.00 44.04 2.39
1888 3538 0.673333 CCGCCAAGAGCACACATACA 60.673 55.000 0.00 0.00 44.04 2.29
1889 3539 1.372582 CGCCAAGAGCACACATACAT 58.627 50.000 0.00 0.00 44.04 2.29
1890 3540 1.739466 CGCCAAGAGCACACATACATT 59.261 47.619 0.00 0.00 44.04 2.71
1891 3541 2.476686 CGCCAAGAGCACACATACATTG 60.477 50.000 0.00 0.00 44.04 2.82
1892 3542 2.489329 GCCAAGAGCACACATACATTGT 59.511 45.455 0.00 0.00 42.97 2.71
1893 3543 3.426695 GCCAAGAGCACACATACATTGTC 60.427 47.826 0.00 0.00 42.97 3.18
1894 3544 4.005650 CCAAGAGCACACATACATTGTCT 58.994 43.478 0.00 0.00 36.00 3.41
1895 3545 5.178061 CCAAGAGCACACATACATTGTCTA 58.822 41.667 0.00 0.00 36.00 2.59
1896 3546 5.292834 CCAAGAGCACACATACATTGTCTAG 59.707 44.000 0.00 0.00 36.00 2.43
1897 3547 5.667539 AGAGCACACATACATTGTCTAGT 57.332 39.130 0.00 0.00 36.00 2.57
1898 3548 6.042638 AGAGCACACATACATTGTCTAGTT 57.957 37.500 0.00 0.00 36.00 2.24
1899 3549 6.102663 AGAGCACACATACATTGTCTAGTTC 58.897 40.000 0.00 0.00 36.00 3.01
1900 3550 5.793817 AGCACACATACATTGTCTAGTTCA 58.206 37.500 0.00 0.00 36.00 3.18
1901 3551 5.871524 AGCACACATACATTGTCTAGTTCAG 59.128 40.000 0.00 0.00 36.00 3.02
1902 3552 5.869344 GCACACATACATTGTCTAGTTCAGA 59.131 40.000 0.00 0.00 36.00 3.27
1903 3553 6.035435 GCACACATACATTGTCTAGTTCAGAG 59.965 42.308 0.00 0.00 36.00 3.35
1904 3554 6.035435 CACACATACATTGTCTAGTTCAGAGC 59.965 42.308 0.00 0.00 36.00 4.09
1905 3555 6.101997 CACATACATTGTCTAGTTCAGAGCA 58.898 40.000 0.00 0.00 36.00 4.26
1906 3556 6.035435 CACATACATTGTCTAGTTCAGAGCAC 59.965 42.308 0.00 0.00 36.00 4.40
1907 3557 4.607293 ACATTGTCTAGTTCAGAGCACA 57.393 40.909 0.00 0.00 32.51 4.57
1908 3558 4.310769 ACATTGTCTAGTTCAGAGCACAC 58.689 43.478 0.00 0.00 32.51 3.82
1909 3559 4.202253 ACATTGTCTAGTTCAGAGCACACA 60.202 41.667 0.00 0.00 32.51 3.72
1910 3560 3.371102 TGTCTAGTTCAGAGCACACAC 57.629 47.619 0.00 0.00 32.51 3.82
1911 3561 2.693074 TGTCTAGTTCAGAGCACACACA 59.307 45.455 0.00 0.00 32.51 3.72
1912 3562 3.053455 GTCTAGTTCAGAGCACACACAC 58.947 50.000 0.00 0.00 32.51 3.82
1913 3563 2.035961 TCTAGTTCAGAGCACACACACC 59.964 50.000 0.00 0.00 0.00 4.16
1914 3564 0.179045 AGTTCAGAGCACACACACCC 60.179 55.000 0.00 0.00 0.00 4.61
1915 3565 0.463654 GTTCAGAGCACACACACCCA 60.464 55.000 0.00 0.00 0.00 4.51
1916 3566 0.463654 TTCAGAGCACACACACCCAC 60.464 55.000 0.00 0.00 0.00 4.61
1917 3567 2.108976 AGAGCACACACACCCACG 59.891 61.111 0.00 0.00 0.00 4.94
1918 3568 3.649986 GAGCACACACACCCACGC 61.650 66.667 0.00 0.00 0.00 5.34
1921 3571 3.582120 CACACACACCCACGCCAC 61.582 66.667 0.00 0.00 0.00 5.01
1922 3572 4.102815 ACACACACCCACGCCACA 62.103 61.111 0.00 0.00 0.00 4.17
1923 3573 3.582120 CACACACCCACGCCACAC 61.582 66.667 0.00 0.00 0.00 3.82
1924 3574 4.102815 ACACACCCACGCCACACA 62.103 61.111 0.00 0.00 0.00 3.72
1925 3575 2.826287 CACACCCACGCCACACAA 60.826 61.111 0.00 0.00 0.00 3.33
1926 3576 2.826738 ACACCCACGCCACACAAC 60.827 61.111 0.00 0.00 0.00 3.32
1927 3577 2.826287 CACCCACGCCACACAACA 60.826 61.111 0.00 0.00 0.00 3.33
1928 3578 2.826738 ACCCACGCCACACAACAC 60.827 61.111 0.00 0.00 0.00 3.32
1929 3579 3.947841 CCCACGCCACACAACACG 61.948 66.667 0.00 0.00 0.00 4.49
1930 3580 2.892914 CCACGCCACACAACACGA 60.893 61.111 0.00 0.00 0.00 4.35
1931 3581 2.625906 CACGCCACACAACACGAG 59.374 61.111 0.00 0.00 0.00 4.18
1932 3582 2.587753 ACGCCACACAACACGAGG 60.588 61.111 0.00 0.00 0.00 4.63
1933 3583 2.587753 CGCCACACAACACGAGGT 60.588 61.111 0.00 0.00 0.00 3.85
1934 3584 2.594962 CGCCACACAACACGAGGTC 61.595 63.158 0.00 0.00 0.00 3.85
1935 3585 2.251642 GCCACACAACACGAGGTCC 61.252 63.158 0.00 0.00 0.00 4.46
1936 3586 1.145156 CCACACAACACGAGGTCCA 59.855 57.895 0.00 0.00 0.00 4.02
1937 3587 0.462937 CCACACAACACGAGGTCCAA 60.463 55.000 0.00 0.00 0.00 3.53
1938 3588 1.374560 CACACAACACGAGGTCCAAA 58.625 50.000 0.00 0.00 0.00 3.28
1939 3589 1.330521 CACACAACACGAGGTCCAAAG 59.669 52.381 0.00 0.00 0.00 2.77
1940 3590 0.944386 CACAACACGAGGTCCAAAGG 59.056 55.000 0.00 0.00 0.00 3.11
1941 3591 0.544697 ACAACACGAGGTCCAAAGGT 59.455 50.000 0.00 0.00 0.00 3.50
1942 3592 1.764134 ACAACACGAGGTCCAAAGGTA 59.236 47.619 0.00 0.00 0.00 3.08
1943 3593 2.140717 CAACACGAGGTCCAAAGGTAC 58.859 52.381 0.00 0.00 0.00 3.34
1945 3595 1.343465 ACACGAGGTCCAAAGGTACTG 59.657 52.381 0.00 0.00 40.86 2.74
1946 3596 0.320697 ACGAGGTCCAAAGGTACTGC 59.679 55.000 0.00 0.00 40.86 4.40
1947 3597 0.608640 CGAGGTCCAAAGGTACTGCT 59.391 55.000 0.00 0.00 40.86 4.24
1948 3598 1.673033 CGAGGTCCAAAGGTACTGCTG 60.673 57.143 0.00 0.00 40.86 4.41
1949 3599 1.623811 GAGGTCCAAAGGTACTGCTGA 59.376 52.381 0.00 0.00 40.86 4.26
1950 3600 1.625818 AGGTCCAAAGGTACTGCTGAG 59.374 52.381 0.00 0.00 40.86 3.35
1951 3601 1.339151 GGTCCAAAGGTACTGCTGAGG 60.339 57.143 0.00 0.00 40.86 3.86
1952 3602 0.984230 TCCAAAGGTACTGCTGAGGG 59.016 55.000 0.00 0.00 40.86 4.30
1953 3603 0.678048 CCAAAGGTACTGCTGAGGGC 60.678 60.000 0.00 0.00 40.86 5.19
1963 3613 3.978272 CTGAGGGCACAGCTCAAC 58.022 61.111 0.00 0.00 0.00 3.18
1964 3614 1.071987 CTGAGGGCACAGCTCAACA 59.928 57.895 0.00 0.00 0.00 3.33
1965 3615 0.535780 CTGAGGGCACAGCTCAACAA 60.536 55.000 0.00 0.00 0.00 2.83
1966 3616 0.535780 TGAGGGCACAGCTCAACAAG 60.536 55.000 0.00 0.00 0.00 3.16
1975 3625 2.114638 GCTCAACAAGCCCAACACA 58.885 52.632 0.00 0.00 45.92 3.72
1976 3626 0.459489 GCTCAACAAGCCCAACACAA 59.541 50.000 0.00 0.00 45.92 3.33
1977 3627 1.802508 GCTCAACAAGCCCAACACAAC 60.803 52.381 0.00 0.00 45.92 3.32
1978 3628 1.476085 CTCAACAAGCCCAACACAACA 59.524 47.619 0.00 0.00 0.00 3.33
1979 3629 1.203523 TCAACAAGCCCAACACAACAC 59.796 47.619 0.00 0.00 0.00 3.32
1980 3630 1.067283 CAACAAGCCCAACACAACACA 60.067 47.619 0.00 0.00 0.00 3.72
1981 3631 0.530288 ACAAGCCCAACACAACACAC 59.470 50.000 0.00 0.00 0.00 3.82
1982 3632 0.529833 CAAGCCCAACACAACACACA 59.470 50.000 0.00 0.00 0.00 3.72
1983 3633 0.530288 AAGCCCAACACAACACACAC 59.470 50.000 0.00 0.00 0.00 3.82
1984 3634 0.610509 AGCCCAACACAACACACACA 60.611 50.000 0.00 0.00 0.00 3.72
1985 3635 0.244994 GCCCAACACAACACACACAA 59.755 50.000 0.00 0.00 0.00 3.33
1986 3636 1.735369 GCCCAACACAACACACACAAG 60.735 52.381 0.00 0.00 0.00 3.16
1987 3637 1.815613 CCCAACACAACACACACAAGA 59.184 47.619 0.00 0.00 0.00 3.02
1988 3638 2.230025 CCCAACACAACACACACAAGAA 59.770 45.455 0.00 0.00 0.00 2.52
1989 3639 3.305676 CCCAACACAACACACACAAGAAA 60.306 43.478 0.00 0.00 0.00 2.52
1990 3640 4.302455 CCAACACAACACACACAAGAAAA 58.698 39.130 0.00 0.00 0.00 2.29
1991 3641 4.149747 CCAACACAACACACACAAGAAAAC 59.850 41.667 0.00 0.00 0.00 2.43
1992 3642 4.576216 ACACAACACACACAAGAAAACA 57.424 36.364 0.00 0.00 0.00 2.83
1993 3643 4.295051 ACACAACACACACAAGAAAACAC 58.705 39.130 0.00 0.00 0.00 3.32
1994 3644 4.202060 ACACAACACACACAAGAAAACACA 60.202 37.500 0.00 0.00 0.00 3.72
1995 3645 4.742167 CACAACACACACAAGAAAACACAA 59.258 37.500 0.00 0.00 0.00 3.33
1996 3646 4.981674 ACAACACACACAAGAAAACACAAG 59.018 37.500 0.00 0.00 0.00 3.16
1997 3647 5.218885 CAACACACACAAGAAAACACAAGA 58.781 37.500 0.00 0.00 0.00 3.02
1998 3648 5.046910 ACACACACAAGAAAACACAAGAG 57.953 39.130 0.00 0.00 0.00 2.85
1999 3649 4.082787 ACACACACAAGAAAACACAAGAGG 60.083 41.667 0.00 0.00 0.00 3.69
2000 3650 3.119495 ACACACAAGAAAACACAAGAGGC 60.119 43.478 0.00 0.00 0.00 4.70
2001 3651 2.097466 ACACAAGAAAACACAAGAGGCG 59.903 45.455 0.00 0.00 0.00 5.52
2002 3652 1.065551 ACAAGAAAACACAAGAGGCGC 59.934 47.619 0.00 0.00 0.00 6.53
2003 3653 1.065401 CAAGAAAACACAAGAGGCGCA 59.935 47.619 10.83 0.00 0.00 6.09
2004 3654 0.947244 AGAAAACACAAGAGGCGCAG 59.053 50.000 10.83 0.00 0.00 5.18
2005 3655 0.040067 GAAAACACAAGAGGCGCAGG 60.040 55.000 10.83 0.00 0.00 4.85
2038 3688 2.274104 GGGGCCGGCAAACATCTA 59.726 61.111 30.85 0.00 0.00 1.98
2039 3689 1.379309 GGGGCCGGCAAACATCTAA 60.379 57.895 30.85 0.00 0.00 2.10
2040 3690 0.755327 GGGGCCGGCAAACATCTAAT 60.755 55.000 30.85 0.00 0.00 1.73
2041 3691 0.668535 GGGCCGGCAAACATCTAATC 59.331 55.000 30.85 5.46 0.00 1.75
2042 3692 1.680338 GGCCGGCAAACATCTAATCT 58.320 50.000 30.85 0.00 0.00 2.40
2043 3693 1.334869 GGCCGGCAAACATCTAATCTG 59.665 52.381 30.85 0.00 0.00 2.90
2044 3694 1.334869 GCCGGCAAACATCTAATCTGG 59.665 52.381 24.80 0.00 0.00 3.86
2045 3695 1.334869 CCGGCAAACATCTAATCTGGC 59.665 52.381 0.00 0.00 0.00 4.85
2046 3696 2.292267 CGGCAAACATCTAATCTGGCT 58.708 47.619 0.00 0.00 0.00 4.75
2047 3697 2.289002 CGGCAAACATCTAATCTGGCTC 59.711 50.000 0.00 0.00 0.00 4.70
2048 3698 2.620585 GGCAAACATCTAATCTGGCTCC 59.379 50.000 0.00 0.00 0.00 4.70
2049 3699 2.289002 GCAAACATCTAATCTGGCTCCG 59.711 50.000 0.00 0.00 0.00 4.63
2050 3700 2.874701 CAAACATCTAATCTGGCTCCGG 59.125 50.000 0.00 0.00 0.00 5.14
2051 3701 2.088104 ACATCTAATCTGGCTCCGGA 57.912 50.000 2.93 2.93 35.60 5.14
2052 3702 1.967066 ACATCTAATCTGGCTCCGGAG 59.033 52.381 27.83 27.83 34.49 4.63
2096 3746 3.961197 CGGACGGCCATCGATCGA 61.961 66.667 21.86 21.86 42.43 3.59
2097 3747 2.415843 GGACGGCCATCGATCGAA 59.584 61.111 23.50 5.77 42.43 3.71
2098 3748 1.661821 GGACGGCCATCGATCGAAG 60.662 63.158 23.50 18.04 42.43 3.79
2099 3749 1.661821 GACGGCCATCGATCGAAGG 60.662 63.158 30.09 30.09 42.43 3.46
2100 3750 2.351336 GACGGCCATCGATCGAAGGT 62.351 60.000 32.83 18.58 42.43 3.50
2101 3751 1.661821 CGGCCATCGATCGAAGGTC 60.662 63.158 32.83 31.05 42.43 3.85
2102 3752 1.661821 GGCCATCGATCGAAGGTCG 60.662 63.158 32.83 14.27 42.10 4.79
2103 3753 1.661821 GCCATCGATCGAAGGTCGG 60.662 63.158 32.83 22.64 40.88 4.79
2104 3754 1.661821 CCATCGATCGAAGGTCGGC 60.662 63.158 27.08 0.00 40.88 5.54
2105 3755 2.011349 CATCGATCGAAGGTCGGCG 61.011 63.158 23.50 0.00 40.88 6.46
2106 3756 2.184830 ATCGATCGAAGGTCGGCGA 61.185 57.895 23.50 4.99 45.18 5.54
2108 3758 2.011349 CGATCGAAGGTCGGCGATG 61.011 63.158 14.79 1.06 46.13 3.84
2109 3759 1.359117 GATCGAAGGTCGGCGATGA 59.641 57.895 14.79 7.03 46.13 2.92
2110 3760 0.248907 GATCGAAGGTCGGCGATGAA 60.249 55.000 14.79 0.00 46.13 2.57
2111 3761 0.249073 ATCGAAGGTCGGCGATGAAG 60.249 55.000 14.79 4.40 44.64 3.02
2112 3762 1.878522 CGAAGGTCGGCGATGAAGG 60.879 63.158 14.79 0.00 36.00 3.46
2113 3763 2.125106 AAGGTCGGCGATGAAGGC 60.125 61.111 14.79 0.00 0.00 4.35
2119 3769 2.423446 GGCGATGAAGGCGGAGAT 59.577 61.111 0.00 0.00 0.00 2.75
2120 3770 1.958205 GGCGATGAAGGCGGAGATG 60.958 63.158 0.00 0.00 0.00 2.90
2121 3771 1.958205 GCGATGAAGGCGGAGATGG 60.958 63.158 0.00 0.00 0.00 3.51
2122 3772 1.958205 CGATGAAGGCGGAGATGGC 60.958 63.158 0.00 0.00 0.00 4.40
2123 3773 1.958205 GATGAAGGCGGAGATGGCG 60.958 63.158 0.00 0.00 39.82 5.69
2124 3774 2.650813 GATGAAGGCGGAGATGGCGT 62.651 60.000 0.00 0.00 39.82 5.68
2125 3775 2.586357 GAAGGCGGAGATGGCGTC 60.586 66.667 0.00 0.00 39.82 5.19
2126 3776 4.162690 AAGGCGGAGATGGCGTCC 62.163 66.667 2.37 0.00 39.82 4.79
2131 3781 4.222847 GGAGATGGCGTCCCGGTC 62.223 72.222 0.00 0.00 0.00 4.79
2132 3782 4.222847 GAGATGGCGTCCCGGTCC 62.223 72.222 0.00 0.00 0.00 4.46
2145 3795 2.757099 GGTCCCGAGGGCGACTAA 60.757 66.667 2.58 0.00 40.82 2.24
2146 3796 2.783288 GGTCCCGAGGGCGACTAAG 61.783 68.421 2.58 0.00 40.82 2.18
2147 3797 3.145551 TCCCGAGGGCGACTAAGC 61.146 66.667 2.58 0.00 40.82 3.09
2148 3798 4.570663 CCCGAGGGCGACTAAGCG 62.571 72.222 0.00 0.00 40.82 4.68
2149 3799 4.570663 CCGAGGGCGACTAAGCGG 62.571 72.222 0.00 0.00 40.82 5.52
2157 3807 2.744709 GACTAAGCGGCCGCCAAA 60.745 61.111 44.47 28.84 43.17 3.28
2158 3808 2.746277 ACTAAGCGGCCGCCAAAG 60.746 61.111 44.47 36.71 43.17 2.77
2159 3809 2.746277 CTAAGCGGCCGCCAAAGT 60.746 61.111 44.47 25.33 43.17 2.66
2160 3810 2.281900 TAAGCGGCCGCCAAAGTT 60.282 55.556 44.47 32.71 43.17 2.66
2161 3811 2.527547 CTAAGCGGCCGCCAAAGTTG 62.528 60.000 44.47 23.70 43.17 3.16
2164 3814 4.277593 CGGCCGCCAAAGTTGCAA 62.278 61.111 14.67 0.00 0.00 4.08
2165 3815 2.356194 GGCCGCCAAAGTTGCAAG 60.356 61.111 3.91 0.00 0.00 4.01
2166 3816 2.417097 GCCGCCAAAGTTGCAAGT 59.583 55.556 0.00 0.00 0.00 3.16
2167 3817 1.657556 GCCGCCAAAGTTGCAAGTA 59.342 52.632 7.33 0.00 0.00 2.24
2168 3818 0.031449 GCCGCCAAAGTTGCAAGTAA 59.969 50.000 7.33 0.00 0.00 2.24
2169 3819 1.766069 CCGCCAAAGTTGCAAGTAAC 58.234 50.000 7.33 0.00 0.00 2.50
2170 3820 1.601914 CCGCCAAAGTTGCAAGTAACC 60.602 52.381 7.33 0.00 0.00 2.85
2171 3821 1.066303 CGCCAAAGTTGCAAGTAACCA 59.934 47.619 7.33 0.00 0.00 3.67
2172 3822 2.742774 GCCAAAGTTGCAAGTAACCAG 58.257 47.619 7.33 0.00 0.00 4.00
2173 3823 2.360801 GCCAAAGTTGCAAGTAACCAGA 59.639 45.455 7.33 0.00 0.00 3.86
2174 3824 3.795488 GCCAAAGTTGCAAGTAACCAGAC 60.795 47.826 7.33 0.00 0.00 3.51
2175 3825 3.380004 CCAAAGTTGCAAGTAACCAGACA 59.620 43.478 7.33 0.00 0.00 3.41
2176 3826 4.498009 CCAAAGTTGCAAGTAACCAGACAG 60.498 45.833 7.33 0.00 0.00 3.51
2177 3827 3.560636 AGTTGCAAGTAACCAGACAGT 57.439 42.857 4.57 0.00 0.00 3.55
2178 3828 3.886123 AGTTGCAAGTAACCAGACAGTT 58.114 40.909 4.57 0.00 0.00 3.16
2179 3829 4.270008 AGTTGCAAGTAACCAGACAGTTT 58.730 39.130 4.57 0.00 0.00 2.66
2180 3830 4.096382 AGTTGCAAGTAACCAGACAGTTTG 59.904 41.667 4.57 0.00 0.00 2.93
2181 3831 3.879998 TGCAAGTAACCAGACAGTTTGA 58.120 40.909 0.00 0.00 0.00 2.69
2182 3832 4.265893 TGCAAGTAACCAGACAGTTTGAA 58.734 39.130 0.00 0.00 0.00 2.69
2183 3833 4.702612 TGCAAGTAACCAGACAGTTTGAAA 59.297 37.500 0.00 0.00 0.00 2.69
2184 3834 5.184096 TGCAAGTAACCAGACAGTTTGAAAA 59.816 36.000 0.00 0.00 0.00 2.29
2185 3835 6.096695 GCAAGTAACCAGACAGTTTGAAAAA 58.903 36.000 0.00 0.00 0.00 1.94
2211 3861 3.526430 TCGCCCATCGAAGAGGAG 58.474 61.111 3.11 0.11 43.16 3.69
2212 3862 1.379977 TCGCCCATCGAAGAGGAGT 60.380 57.895 3.11 0.00 43.16 3.85
2213 3863 1.227089 CGCCCATCGAAGAGGAGTG 60.227 63.158 3.11 0.00 43.16 3.51
2214 3864 1.522580 GCCCATCGAAGAGGAGTGC 60.523 63.158 3.11 0.00 43.16 4.40
2215 3865 1.227089 CCCATCGAAGAGGAGTGCG 60.227 63.158 3.72 0.00 43.16 5.34
2216 3866 1.880340 CCATCGAAGAGGAGTGCGC 60.880 63.158 0.00 0.00 43.16 6.09
2217 3867 1.140589 CATCGAAGAGGAGTGCGCT 59.859 57.895 9.73 0.00 43.16 5.92
2218 3868 1.140589 ATCGAAGAGGAGTGCGCTG 59.859 57.895 3.44 0.00 43.63 5.18
2219 3869 1.315981 ATCGAAGAGGAGTGCGCTGA 61.316 55.000 3.44 0.00 43.63 4.26
2220 3870 1.080501 CGAAGAGGAGTGCGCTGAA 60.081 57.895 3.44 0.00 0.00 3.02
2221 3871 0.459237 CGAAGAGGAGTGCGCTGAAT 60.459 55.000 3.44 0.00 0.00 2.57
2222 3872 1.285578 GAAGAGGAGTGCGCTGAATC 58.714 55.000 3.44 0.00 0.00 2.52
2223 3873 0.610174 AAGAGGAGTGCGCTGAATCA 59.390 50.000 3.44 0.00 0.00 2.57
2224 3874 0.829333 AGAGGAGTGCGCTGAATCAT 59.171 50.000 3.44 0.00 0.00 2.45
2225 3875 2.034878 AGAGGAGTGCGCTGAATCATA 58.965 47.619 3.44 0.00 0.00 2.15
2226 3876 2.432146 AGAGGAGTGCGCTGAATCATAA 59.568 45.455 3.44 0.00 0.00 1.90
2227 3877 2.799412 GAGGAGTGCGCTGAATCATAAG 59.201 50.000 3.44 0.00 0.00 1.73
2228 3878 2.169352 AGGAGTGCGCTGAATCATAAGT 59.831 45.455 3.44 0.00 0.00 2.24
2229 3879 2.939103 GGAGTGCGCTGAATCATAAGTT 59.061 45.455 3.44 0.00 0.00 2.66
2230 3880 3.375299 GGAGTGCGCTGAATCATAAGTTT 59.625 43.478 3.44 0.00 0.00 2.66
2231 3881 4.570772 GGAGTGCGCTGAATCATAAGTTTA 59.429 41.667 3.44 0.00 0.00 2.01
2232 3882 5.237344 GGAGTGCGCTGAATCATAAGTTTAT 59.763 40.000 3.44 0.00 0.00 1.40
2233 3883 6.238484 GGAGTGCGCTGAATCATAAGTTTATT 60.238 38.462 3.44 0.00 0.00 1.40
2234 3884 6.489675 AGTGCGCTGAATCATAAGTTTATTG 58.510 36.000 9.73 0.00 0.00 1.90
2235 3885 5.172053 GTGCGCTGAATCATAAGTTTATTGC 59.828 40.000 9.73 0.00 0.00 3.56
2236 3886 4.376861 GCGCTGAATCATAAGTTTATTGCG 59.623 41.667 0.00 0.00 41.14 4.85
2237 3887 5.737353 CGCTGAATCATAAGTTTATTGCGA 58.263 37.500 0.00 0.00 40.75 5.10
2238 3888 6.191661 CGCTGAATCATAAGTTTATTGCGAA 58.808 36.000 0.00 0.00 40.75 4.70
2239 3889 6.852853 CGCTGAATCATAAGTTTATTGCGAAT 59.147 34.615 0.00 0.00 40.75 3.34
2240 3890 7.058806 CGCTGAATCATAAGTTTATTGCGAATC 59.941 37.037 0.00 0.00 40.75 2.52
2241 3891 7.058806 GCTGAATCATAAGTTTATTGCGAATCG 59.941 37.037 0.00 0.00 0.00 3.34
2242 3892 7.915508 TGAATCATAAGTTTATTGCGAATCGT 58.084 30.769 4.07 0.00 0.00 3.73
2243 3893 8.061857 TGAATCATAAGTTTATTGCGAATCGTC 58.938 33.333 4.07 0.00 0.00 4.20
2244 3894 6.281848 TCATAAGTTTATTGCGAATCGTCC 57.718 37.500 4.07 0.00 0.00 4.79
2245 3895 3.651562 AAGTTTATTGCGAATCGTCCG 57.348 42.857 4.07 0.00 0.00 4.79
2246 3896 1.931172 AGTTTATTGCGAATCGTCCGG 59.069 47.619 4.07 0.00 0.00 5.14
2247 3897 1.928503 GTTTATTGCGAATCGTCCGGA 59.071 47.619 0.00 0.00 0.00 5.14
2248 3898 1.847818 TTATTGCGAATCGTCCGGAG 58.152 50.000 3.06 0.00 0.00 4.63
2261 3911 3.214123 CGGAGGGTCCACGCGATA 61.214 66.667 15.93 0.00 35.91 2.92
2262 3912 2.728817 GGAGGGTCCACGCGATAG 59.271 66.667 15.93 1.33 36.28 2.08
2276 3926 1.517242 CGATAGCCCCAATCTCAAGC 58.483 55.000 0.00 0.00 0.00 4.01
2277 3927 1.879796 CGATAGCCCCAATCTCAAGCC 60.880 57.143 0.00 0.00 0.00 4.35
2278 3928 1.143684 GATAGCCCCAATCTCAAGCCA 59.856 52.381 0.00 0.00 0.00 4.75
2279 3929 0.255890 TAGCCCCAATCTCAAGCCAC 59.744 55.000 0.00 0.00 0.00 5.01
2280 3930 1.304381 GCCCCAATCTCAAGCCACA 60.304 57.895 0.00 0.00 0.00 4.17
2281 3931 1.318158 GCCCCAATCTCAAGCCACAG 61.318 60.000 0.00 0.00 0.00 3.66
2282 3932 0.682209 CCCCAATCTCAAGCCACAGG 60.682 60.000 0.00 0.00 0.00 4.00
2283 3933 0.682209 CCCAATCTCAAGCCACAGGG 60.682 60.000 0.00 0.00 37.18 4.45
2284 3934 0.682209 CCAATCTCAAGCCACAGGGG 60.682 60.000 0.00 0.00 40.85 4.79
2728 4423 1.064654 GATCGGCTCATTTGTCAAGGC 59.935 52.381 0.00 0.00 0.00 4.35
3167 4869 1.457303 GCTCGCAACTATGATAAGGCG 59.543 52.381 0.00 0.00 45.24 5.52
3213 4915 2.038426 TCGAGGAATGTGAAGCCTTCAA 59.962 45.455 9.08 0.36 42.15 2.69
3214 4916 2.813754 CGAGGAATGTGAAGCCTTCAAA 59.186 45.455 9.08 3.82 42.15 2.69
3242 4944 1.517257 CGGCGCTCTTCTTCGATGT 60.517 57.895 7.64 0.00 0.00 3.06
3272 4974 0.107508 GGGAAGACATAGCTGCAGCA 60.108 55.000 38.24 24.73 45.16 4.41
3471 5173 1.097232 CTGCAAAAGCGGGATGATCA 58.903 50.000 0.00 0.00 0.00 2.92
3545 5247 8.463930 TGAAGAGTTCAACAATGGTTTCTATT 57.536 30.769 0.00 0.00 36.59 1.73
3572 5274 7.416964 AGAGATGTATGCTAGAAACAGAACT 57.583 36.000 0.00 0.00 0.00 3.01
3883 5585 3.083122 AGCCTGAAGATTCTGCAACAT 57.917 42.857 0.00 0.00 0.00 2.71
3970 5673 3.303132 GGCATCGACATCGTTTCCAATAC 60.303 47.826 0.54 0.00 40.80 1.89
3999 5702 1.933853 GTCTACAATGCCATGGTCGAC 59.066 52.381 14.67 7.13 0.00 4.20
4026 5729 1.436195 GCAAGTGCGGCAATATCGGA 61.436 55.000 3.23 0.00 0.00 4.55
4157 5862 0.729116 CTGCTACCAATCCTTGTGCG 59.271 55.000 0.00 0.00 0.00 5.34
4244 5949 2.915349 CAGGAGGTGGAGAACATCATG 58.085 52.381 0.00 0.00 43.79 3.07
4375 6082 2.487086 GGGCAAGCAAAATTTTCAGGGT 60.487 45.455 0.00 0.00 0.00 4.34
4383 6090 4.262851 GCAAAATTTTCAGGGTATGGGTGT 60.263 41.667 0.00 0.00 0.00 4.16
4786 9107 4.451900 ACCTTGCGTATAGGAATCAAAGG 58.548 43.478 8.30 0.00 36.58 3.11
4979 9704 5.293814 CAGTTATCTGCCTTGAGATTGACTG 59.706 44.000 0.00 0.00 38.13 3.51
5017 9742 3.857665 GCAATCAATGTGCAGATCAGTTG 59.142 43.478 0.00 4.01 41.80 3.16
5046 9771 0.940126 GATCAATGCCTACGCCACTG 59.060 55.000 0.00 0.00 0.00 3.66
5309 10035 1.453762 GCCAGATGCAGGAGATTGGC 61.454 60.000 9.21 9.21 43.54 4.52
5618 10399 5.453339 GCTAGCAACCATCACAGGTATCTTA 60.453 44.000 10.63 0.00 42.25 2.10
5683 10464 8.267183 TGATTTGTGTTACTACATCCAGATGAT 58.733 33.333 14.42 1.98 41.20 2.45
5752 10533 9.773328 CATATGTACATTAGGACAAGTTTTGTG 57.227 33.333 14.77 0.00 45.52 3.33
5911 12030 1.126296 GAAGACTTAACAGTTCGCCGC 59.874 52.381 0.00 0.00 31.22 6.53
5976 12095 6.770785 TGTTACTCTGCTTCCACTTACAAATT 59.229 34.615 0.00 0.00 0.00 1.82
5984 12103 8.995027 TGCTTCCACTTACAAATTCCATATAT 57.005 30.769 0.00 0.00 0.00 0.86
6070 12189 4.290722 AGGGATCTTCCAAGTTCAATCTGT 59.709 41.667 0.00 0.00 38.64 3.41
6076 12195 8.779354 ATCTTCCAAGTTCAATCTGTAAGTAC 57.221 34.615 0.00 0.00 33.76 2.73
6193 12328 9.756571 ACAGTTAGGAAGATTCTCTAGAACTTA 57.243 33.333 0.00 0.00 36.80 2.24
6204 12339 8.999220 ATTCTCTAGAACTTACCGGTAAAAAG 57.001 34.615 26.41 19.55 36.80 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.315949 GGTGGGCCACGTCCTACA 61.316 66.667 29.18 0.00 39.12 2.74
17 18 3.324108 GTAGTTCGGGGTGGGCCA 61.324 66.667 0.00 0.00 36.17 5.36
131 134 5.820423 CCCTTATTTGTCCGTTCATACATCA 59.180 40.000 0.00 0.00 0.00 3.07
163 166 0.462937 TCAGTGACCGGGTGTGTTTG 60.463 55.000 3.30 0.00 0.00 2.93
164 168 0.463116 GTCAGTGACCGGGTGTGTTT 60.463 55.000 12.54 0.00 0.00 2.83
207 211 4.745783 GCCGGACTTAGCAAATATAACCCT 60.746 45.833 5.05 0.00 0.00 4.34
212 216 4.682778 ACAGCCGGACTTAGCAAATATA 57.317 40.909 5.05 0.00 0.00 0.86
320 336 7.388460 AGATTGGATGACTGTCTTCAATTTC 57.612 36.000 20.88 12.13 0.00 2.17
333 349 7.989826 AGCTTGTACATTAAAGATTGGATGAC 58.010 34.615 0.00 0.00 0.00 3.06
347 363 6.463995 TGGAACTTTTTGAGCTTGTACATT 57.536 33.333 0.00 0.00 0.00 2.71
416 432 8.084073 CCACTGATTTTGACAGTATTCACATTT 58.916 33.333 0.00 0.00 45.15 2.32
417 433 7.231317 ACCACTGATTTTGACAGTATTCACATT 59.769 33.333 0.00 0.00 45.15 2.71
457 474 2.746277 GTAAGTGGGGCAGCACGG 60.746 66.667 0.00 0.00 0.00 4.94
479 496 1.475034 GCCAAGACGCCATTCTCCATA 60.475 52.381 0.00 0.00 0.00 2.74
509 526 0.391793 TATTCACGCGGGAACATGCA 60.392 50.000 28.60 2.40 0.00 3.96
512 529 3.530265 TTACTATTCACGCGGGAACAT 57.470 42.857 28.60 14.75 0.00 2.71
513 530 2.995258 GTTTACTATTCACGCGGGAACA 59.005 45.455 28.60 15.47 0.00 3.18
515 532 3.316071 TGTTTACTATTCACGCGGGAA 57.684 42.857 28.17 28.17 0.00 3.97
575 593 7.275999 TGCGATATTAACACGAACATCTACAAA 59.724 33.333 0.00 0.00 0.00 2.83
576 594 6.752815 TGCGATATTAACACGAACATCTACAA 59.247 34.615 0.00 0.00 0.00 2.41
577 595 6.267070 TGCGATATTAACACGAACATCTACA 58.733 36.000 0.00 0.00 0.00 2.74
578 596 6.742999 TGCGATATTAACACGAACATCTAC 57.257 37.500 0.00 0.00 0.00 2.59
596 640 8.085720 TGAAATTTTTCAATGATGTTTGCGAT 57.914 26.923 3.31 0.00 43.62 4.58
626 670 5.855740 TTTTTACCGGTGAAACTCCATTT 57.144 34.783 22.84 0.00 36.74 2.32
670 722 7.781548 AACAGTAAACGACAAATGTTACTCT 57.218 32.000 0.00 0.00 0.00 3.24
684 736 7.924103 AGGCAAAAAGATTAAACAGTAAACG 57.076 32.000 0.00 0.00 0.00 3.60
829 1277 0.740737 CGAATTCACCCCAATCAGCC 59.259 55.000 6.22 0.00 0.00 4.85
842 1290 1.411612 ACGAGGATGGGGTACGAATTC 59.588 52.381 0.00 0.00 0.00 2.17
847 1295 0.465824 AGAGACGAGGATGGGGTACG 60.466 60.000 0.00 0.00 0.00 3.67
1560 3159 0.542333 TCGGGGCGGATTAAATGACA 59.458 50.000 0.00 0.00 0.00 3.58
1642 3274 6.364165 CACACATGAATCAGAATTGTTCAACC 59.636 38.462 0.00 0.00 35.70 3.77
1742 3384 5.339611 CGAGTGAATTTTGAAAATGACCGAC 59.660 40.000 3.62 0.00 0.00 4.79
1754 3396 8.806634 TCTTCAATGAAAAACGAGTGAATTTTG 58.193 29.630 0.00 0.00 0.00 2.44
1755 3397 8.925161 TCTTCAATGAAAAACGAGTGAATTTT 57.075 26.923 0.00 0.00 0.00 1.82
1756 3398 8.925161 TTCTTCAATGAAAAACGAGTGAATTT 57.075 26.923 0.00 0.00 0.00 1.82
1757 3399 9.533253 AATTCTTCAATGAAAAACGAGTGAATT 57.467 25.926 8.69 8.69 0.00 2.17
1758 3400 9.185192 GAATTCTTCAATGAAAAACGAGTGAAT 57.815 29.630 0.00 0.00 0.00 2.57
1759 3401 8.187480 TGAATTCTTCAATGAAAAACGAGTGAA 58.813 29.630 7.05 0.00 36.59 3.18
1776 3426 7.436933 AGTTCCATCCAAAACTTGAATTCTTC 58.563 34.615 7.05 0.00 31.81 2.87
1787 3437 6.895607 TTTTCGAAAAGTTCCATCCAAAAC 57.104 33.333 19.08 0.00 0.00 2.43
1811 3461 3.995705 TCGGTAAATTGACGAAATTCGGT 59.004 39.130 19.95 5.31 45.59 4.69
1818 3468 4.276431 AGCCTTTTTCGGTAAATTGACGAA 59.724 37.500 7.70 7.70 43.84 3.85
1819 3469 3.816523 AGCCTTTTTCGGTAAATTGACGA 59.183 39.130 0.00 0.00 34.47 4.20
1820 3470 4.155310 AGCCTTTTTCGGTAAATTGACG 57.845 40.909 0.00 0.00 0.00 4.35
1821 3471 5.116528 CGAAAGCCTTTTTCGGTAAATTGAC 59.883 40.000 12.72 0.00 45.17 3.18
1840 3490 3.982576 ATTTATAAAGCGGGGCGAAAG 57.017 42.857 3.94 0.00 0.00 2.62
1841 3491 5.823353 CTTTATTTATAAAGCGGGGCGAAA 58.177 37.500 8.78 0.00 41.69 3.46
1842 3492 5.427036 CTTTATTTATAAAGCGGGGCGAA 57.573 39.130 8.78 0.00 41.69 4.70
1852 3502 7.603651 TCTTGGCGGTTTGCTTTATTTATAAA 58.396 30.769 0.00 0.00 45.43 1.40
1853 3503 7.159322 TCTTGGCGGTTTGCTTTATTTATAA 57.841 32.000 0.00 0.00 45.43 0.98
1854 3504 6.679392 GCTCTTGGCGGTTTGCTTTATTTATA 60.679 38.462 0.00 0.00 45.43 0.98
1855 3505 5.650543 CTCTTGGCGGTTTGCTTTATTTAT 58.349 37.500 0.00 0.00 45.43 1.40
1856 3506 4.617298 GCTCTTGGCGGTTTGCTTTATTTA 60.617 41.667 0.00 0.00 45.43 1.40
1857 3507 3.860754 GCTCTTGGCGGTTTGCTTTATTT 60.861 43.478 0.00 0.00 45.43 1.40
1858 3508 2.352715 GCTCTTGGCGGTTTGCTTTATT 60.353 45.455 0.00 0.00 45.43 1.40
1859 3509 1.202348 GCTCTTGGCGGTTTGCTTTAT 59.798 47.619 0.00 0.00 45.43 1.40
1860 3510 0.596082 GCTCTTGGCGGTTTGCTTTA 59.404 50.000 0.00 0.00 45.43 1.85
1861 3511 1.363807 GCTCTTGGCGGTTTGCTTT 59.636 52.632 0.00 0.00 45.43 3.51
1862 3512 1.827789 TGCTCTTGGCGGTTTGCTT 60.828 52.632 0.00 0.00 45.43 3.91
1863 3513 2.203337 TGCTCTTGGCGGTTTGCT 60.203 55.556 0.00 0.00 45.43 3.91
1864 3514 2.050077 GTGCTCTTGGCGGTTTGC 60.050 61.111 0.00 0.00 45.43 3.68
1865 3515 1.008538 GTGTGCTCTTGGCGGTTTG 60.009 57.895 0.00 0.00 45.43 2.93
1866 3516 0.823356 ATGTGTGCTCTTGGCGGTTT 60.823 50.000 0.00 0.00 45.43 3.27
1867 3517 0.036164 TATGTGTGCTCTTGGCGGTT 59.964 50.000 0.00 0.00 45.43 4.44
1868 3518 0.673644 GTATGTGTGCTCTTGGCGGT 60.674 55.000 0.00 0.00 45.43 5.68
1869 3519 0.673333 TGTATGTGTGCTCTTGGCGG 60.673 55.000 0.00 0.00 45.43 6.13
1870 3520 1.372582 ATGTATGTGTGCTCTTGGCG 58.627 50.000 0.00 0.00 45.43 5.69
1871 3521 2.489329 ACAATGTATGTGTGCTCTTGGC 59.511 45.455 0.00 0.00 41.93 4.52
1872 3522 4.005650 AGACAATGTATGTGTGCTCTTGG 58.994 43.478 0.00 0.00 44.12 3.61
1873 3523 5.871524 ACTAGACAATGTATGTGTGCTCTTG 59.128 40.000 0.00 0.00 44.12 3.02
1874 3524 6.042638 ACTAGACAATGTATGTGTGCTCTT 57.957 37.500 0.00 0.00 44.12 2.85
1875 3525 5.667539 ACTAGACAATGTATGTGTGCTCT 57.332 39.130 0.00 0.00 44.12 4.09
1876 3526 5.869344 TGAACTAGACAATGTATGTGTGCTC 59.131 40.000 0.00 0.00 44.12 4.26
1877 3527 5.793817 TGAACTAGACAATGTATGTGTGCT 58.206 37.500 0.00 0.00 44.12 4.40
1878 3528 5.869344 TCTGAACTAGACAATGTATGTGTGC 59.131 40.000 0.00 0.00 44.12 4.57
1879 3529 6.035435 GCTCTGAACTAGACAATGTATGTGTG 59.965 42.308 0.00 0.00 44.12 3.82
1880 3530 6.102663 GCTCTGAACTAGACAATGTATGTGT 58.897 40.000 0.00 0.00 44.12 3.72
1881 3531 6.035435 GTGCTCTGAACTAGACAATGTATGTG 59.965 42.308 0.00 0.00 44.12 3.21
1883 3533 6.035435 GTGTGCTCTGAACTAGACAATGTATG 59.965 42.308 0.00 0.00 0.00 2.39
1884 3534 6.102663 GTGTGCTCTGAACTAGACAATGTAT 58.897 40.000 0.00 0.00 0.00 2.29
1885 3535 5.010617 TGTGTGCTCTGAACTAGACAATGTA 59.989 40.000 0.00 0.00 0.00 2.29
1886 3536 4.202253 TGTGTGCTCTGAACTAGACAATGT 60.202 41.667 0.00 0.00 0.00 2.71
1887 3537 4.151335 GTGTGTGCTCTGAACTAGACAATG 59.849 45.833 0.00 0.00 0.00 2.82
1888 3538 4.202253 TGTGTGTGCTCTGAACTAGACAAT 60.202 41.667 0.00 0.00 0.00 2.71
1889 3539 3.132111 TGTGTGTGCTCTGAACTAGACAA 59.868 43.478 0.00 0.00 0.00 3.18
1890 3540 2.693074 TGTGTGTGCTCTGAACTAGACA 59.307 45.455 0.00 0.00 0.00 3.41
1891 3541 3.053455 GTGTGTGTGCTCTGAACTAGAC 58.947 50.000 0.00 0.00 0.00 2.59
1892 3542 2.035961 GGTGTGTGTGCTCTGAACTAGA 59.964 50.000 0.00 0.00 0.00 2.43
1893 3543 2.408050 GGTGTGTGTGCTCTGAACTAG 58.592 52.381 0.00 0.00 0.00 2.57
1894 3544 1.070134 GGGTGTGTGTGCTCTGAACTA 59.930 52.381 0.00 0.00 0.00 2.24
1895 3545 0.179045 GGGTGTGTGTGCTCTGAACT 60.179 55.000 0.00 0.00 0.00 3.01
1896 3546 0.463654 TGGGTGTGTGTGCTCTGAAC 60.464 55.000 0.00 0.00 0.00 3.18
1897 3547 0.463654 GTGGGTGTGTGTGCTCTGAA 60.464 55.000 0.00 0.00 0.00 3.02
1898 3548 1.146041 GTGGGTGTGTGTGCTCTGA 59.854 57.895 0.00 0.00 0.00 3.27
1899 3549 2.246739 CGTGGGTGTGTGTGCTCTG 61.247 63.158 0.00 0.00 0.00 3.35
1900 3550 2.108976 CGTGGGTGTGTGTGCTCT 59.891 61.111 0.00 0.00 0.00 4.09
1901 3551 3.649986 GCGTGGGTGTGTGTGCTC 61.650 66.667 0.00 0.00 0.00 4.26
1904 3554 3.582120 GTGGCGTGGGTGTGTGTG 61.582 66.667 0.00 0.00 0.00 3.82
1905 3555 4.102815 TGTGGCGTGGGTGTGTGT 62.103 61.111 0.00 0.00 0.00 3.72
1906 3556 3.582120 GTGTGGCGTGGGTGTGTG 61.582 66.667 0.00 0.00 0.00 3.82
1907 3557 3.630298 TTGTGTGGCGTGGGTGTGT 62.630 57.895 0.00 0.00 0.00 3.72
1908 3558 2.826287 TTGTGTGGCGTGGGTGTG 60.826 61.111 0.00 0.00 0.00 3.82
1909 3559 2.826738 GTTGTGTGGCGTGGGTGT 60.827 61.111 0.00 0.00 0.00 4.16
1910 3560 2.826287 TGTTGTGTGGCGTGGGTG 60.826 61.111 0.00 0.00 0.00 4.61
1911 3561 2.826738 GTGTTGTGTGGCGTGGGT 60.827 61.111 0.00 0.00 0.00 4.51
1912 3562 3.947841 CGTGTTGTGTGGCGTGGG 61.948 66.667 0.00 0.00 0.00 4.61
1913 3563 2.881266 CTCGTGTTGTGTGGCGTGG 61.881 63.158 0.00 0.00 0.00 4.94
1914 3564 2.625906 CTCGTGTTGTGTGGCGTG 59.374 61.111 0.00 0.00 0.00 5.34
1915 3565 2.587753 CCTCGTGTTGTGTGGCGT 60.588 61.111 0.00 0.00 0.00 5.68
1916 3566 2.587753 ACCTCGTGTTGTGTGGCG 60.588 61.111 0.00 0.00 0.00 5.69
1917 3567 2.251642 GGACCTCGTGTTGTGTGGC 61.252 63.158 0.00 0.00 0.00 5.01
1918 3568 0.462937 TTGGACCTCGTGTTGTGTGG 60.463 55.000 0.00 0.00 0.00 4.17
1919 3569 1.330521 CTTTGGACCTCGTGTTGTGTG 59.669 52.381 0.00 0.00 0.00 3.82
1920 3570 1.663695 CTTTGGACCTCGTGTTGTGT 58.336 50.000 0.00 0.00 0.00 3.72
1921 3571 0.944386 CCTTTGGACCTCGTGTTGTG 59.056 55.000 0.00 0.00 0.00 3.33
1922 3572 0.544697 ACCTTTGGACCTCGTGTTGT 59.455 50.000 0.00 0.00 0.00 3.32
1923 3573 2.140717 GTACCTTTGGACCTCGTGTTG 58.859 52.381 0.00 0.00 0.00 3.33
1924 3574 2.044758 AGTACCTTTGGACCTCGTGTT 58.955 47.619 0.00 0.00 0.00 3.32
1925 3575 1.343465 CAGTACCTTTGGACCTCGTGT 59.657 52.381 0.00 0.00 0.00 4.49
1926 3576 1.939838 GCAGTACCTTTGGACCTCGTG 60.940 57.143 0.00 0.00 0.00 4.35
1927 3577 0.320697 GCAGTACCTTTGGACCTCGT 59.679 55.000 0.00 0.00 0.00 4.18
1928 3578 0.608640 AGCAGTACCTTTGGACCTCG 59.391 55.000 0.00 0.00 0.00 4.63
1929 3579 1.623811 TCAGCAGTACCTTTGGACCTC 59.376 52.381 0.00 0.00 0.00 3.85
1930 3580 1.625818 CTCAGCAGTACCTTTGGACCT 59.374 52.381 0.00 0.00 0.00 3.85
1931 3581 1.339151 CCTCAGCAGTACCTTTGGACC 60.339 57.143 0.00 0.00 0.00 4.46
1932 3582 1.339151 CCCTCAGCAGTACCTTTGGAC 60.339 57.143 0.00 0.00 0.00 4.02
1933 3583 0.984230 CCCTCAGCAGTACCTTTGGA 59.016 55.000 0.00 0.00 0.00 3.53
1934 3584 0.678048 GCCCTCAGCAGTACCTTTGG 60.678 60.000 0.00 0.00 42.97 3.28
1935 3585 2.859992 GCCCTCAGCAGTACCTTTG 58.140 57.895 0.00 0.00 42.97 2.77
1946 3596 0.535780 TTGTTGAGCTGTGCCCTCAG 60.536 55.000 0.00 0.00 40.16 3.35
1947 3597 0.535780 CTTGTTGAGCTGTGCCCTCA 60.536 55.000 0.00 0.00 37.54 3.86
1948 3598 2.251600 CTTGTTGAGCTGTGCCCTC 58.748 57.895 0.00 0.00 0.00 4.30
1949 3599 4.488790 CTTGTTGAGCTGTGCCCT 57.511 55.556 0.00 0.00 0.00 5.19
1958 3608 1.476085 TGTTGTGTTGGGCTTGTTGAG 59.524 47.619 0.00 0.00 0.00 3.02
1959 3609 1.203523 GTGTTGTGTTGGGCTTGTTGA 59.796 47.619 0.00 0.00 0.00 3.18
1960 3610 1.067283 TGTGTTGTGTTGGGCTTGTTG 60.067 47.619 0.00 0.00 0.00 3.33
1961 3611 1.067213 GTGTGTTGTGTTGGGCTTGTT 60.067 47.619 0.00 0.00 0.00 2.83
1962 3612 0.530288 GTGTGTTGTGTTGGGCTTGT 59.470 50.000 0.00 0.00 0.00 3.16
1963 3613 0.529833 TGTGTGTTGTGTTGGGCTTG 59.470 50.000 0.00 0.00 0.00 4.01
1964 3614 0.530288 GTGTGTGTTGTGTTGGGCTT 59.470 50.000 0.00 0.00 0.00 4.35
1965 3615 0.610509 TGTGTGTGTTGTGTTGGGCT 60.611 50.000 0.00 0.00 0.00 5.19
1966 3616 0.244994 TTGTGTGTGTTGTGTTGGGC 59.755 50.000 0.00 0.00 0.00 5.36
1967 3617 1.815613 TCTTGTGTGTGTTGTGTTGGG 59.184 47.619 0.00 0.00 0.00 4.12
1968 3618 3.567576 TTCTTGTGTGTGTTGTGTTGG 57.432 42.857 0.00 0.00 0.00 3.77
1969 3619 4.742167 TGTTTTCTTGTGTGTGTTGTGTTG 59.258 37.500 0.00 0.00 0.00 3.33
1970 3620 4.742659 GTGTTTTCTTGTGTGTGTTGTGTT 59.257 37.500 0.00 0.00 0.00 3.32
1971 3621 4.202060 TGTGTTTTCTTGTGTGTGTTGTGT 60.202 37.500 0.00 0.00 0.00 3.72
1972 3622 4.294232 TGTGTTTTCTTGTGTGTGTTGTG 58.706 39.130 0.00 0.00 0.00 3.33
1973 3623 4.576216 TGTGTTTTCTTGTGTGTGTTGT 57.424 36.364 0.00 0.00 0.00 3.32
1974 3624 5.218885 TCTTGTGTTTTCTTGTGTGTGTTG 58.781 37.500 0.00 0.00 0.00 3.33
1975 3625 5.446143 TCTTGTGTTTTCTTGTGTGTGTT 57.554 34.783 0.00 0.00 0.00 3.32
1976 3626 4.082787 CCTCTTGTGTTTTCTTGTGTGTGT 60.083 41.667 0.00 0.00 0.00 3.72
1977 3627 4.414852 CCTCTTGTGTTTTCTTGTGTGTG 58.585 43.478 0.00 0.00 0.00 3.82
1978 3628 3.119495 GCCTCTTGTGTTTTCTTGTGTGT 60.119 43.478 0.00 0.00 0.00 3.72
1979 3629 3.438360 GCCTCTTGTGTTTTCTTGTGTG 58.562 45.455 0.00 0.00 0.00 3.82
1980 3630 2.097466 CGCCTCTTGTGTTTTCTTGTGT 59.903 45.455 0.00 0.00 0.00 3.72
1981 3631 2.719798 CGCCTCTTGTGTTTTCTTGTG 58.280 47.619 0.00 0.00 0.00 3.33
1982 3632 1.065551 GCGCCTCTTGTGTTTTCTTGT 59.934 47.619 0.00 0.00 0.00 3.16
1983 3633 1.065401 TGCGCCTCTTGTGTTTTCTTG 59.935 47.619 4.18 0.00 0.00 3.02
1984 3634 1.334869 CTGCGCCTCTTGTGTTTTCTT 59.665 47.619 4.18 0.00 0.00 2.52
1985 3635 0.947244 CTGCGCCTCTTGTGTTTTCT 59.053 50.000 4.18 0.00 0.00 2.52
1986 3636 0.040067 CCTGCGCCTCTTGTGTTTTC 60.040 55.000 4.18 0.00 0.00 2.29
1987 3637 2.032981 CCTGCGCCTCTTGTGTTTT 58.967 52.632 4.18 0.00 0.00 2.43
1988 3638 2.555547 GCCTGCGCCTCTTGTGTTT 61.556 57.895 4.18 0.00 0.00 2.83
1989 3639 2.980233 GCCTGCGCCTCTTGTGTT 60.980 61.111 4.18 0.00 0.00 3.32
2020 3670 3.690685 TAGATGTTTGCCGGCCCCG 62.691 63.158 26.77 0.00 39.44 5.73
2021 3671 0.755327 ATTAGATGTTTGCCGGCCCC 60.755 55.000 26.77 12.29 0.00 5.80
2022 3672 0.668535 GATTAGATGTTTGCCGGCCC 59.331 55.000 26.77 12.70 0.00 5.80
2023 3673 1.334869 CAGATTAGATGTTTGCCGGCC 59.665 52.381 26.77 9.46 0.00 6.13
2024 3674 1.334869 CCAGATTAGATGTTTGCCGGC 59.665 52.381 22.73 22.73 0.00 6.13
2025 3675 1.334869 GCCAGATTAGATGTTTGCCGG 59.665 52.381 0.00 0.00 0.00 6.13
2026 3676 2.289002 GAGCCAGATTAGATGTTTGCCG 59.711 50.000 0.00 0.00 0.00 5.69
2027 3677 2.620585 GGAGCCAGATTAGATGTTTGCC 59.379 50.000 0.00 0.00 0.00 4.52
2028 3678 2.289002 CGGAGCCAGATTAGATGTTTGC 59.711 50.000 0.00 0.00 0.00 3.68
2029 3679 2.874701 CCGGAGCCAGATTAGATGTTTG 59.125 50.000 0.00 0.00 0.00 2.93
2030 3680 2.771943 TCCGGAGCCAGATTAGATGTTT 59.228 45.455 0.00 0.00 0.00 2.83
2031 3681 2.366916 CTCCGGAGCCAGATTAGATGTT 59.633 50.000 20.67 0.00 0.00 2.71
2032 3682 1.967066 CTCCGGAGCCAGATTAGATGT 59.033 52.381 20.67 0.00 0.00 3.06
2033 3683 1.274728 CCTCCGGAGCCAGATTAGATG 59.725 57.143 26.87 3.64 0.00 2.90
2034 3684 1.148027 TCCTCCGGAGCCAGATTAGAT 59.852 52.381 26.87 0.00 0.00 1.98
2035 3685 0.556258 TCCTCCGGAGCCAGATTAGA 59.444 55.000 26.87 12.18 0.00 2.10
2036 3686 0.965439 CTCCTCCGGAGCCAGATTAG 59.035 60.000 26.87 9.84 43.29 1.73
2037 3687 3.133437 CTCCTCCGGAGCCAGATTA 57.867 57.895 26.87 3.68 43.29 1.75
2038 3688 3.962557 CTCCTCCGGAGCCAGATT 58.037 61.111 26.87 0.00 43.29 2.40
2079 3729 3.478724 TTCGATCGATGGCCGTCCG 62.479 63.158 20.18 16.42 39.75 4.79
2080 3730 1.661821 CTTCGATCGATGGCCGTCC 60.662 63.158 20.18 4.51 39.75 4.79
2081 3731 1.661821 CCTTCGATCGATGGCCGTC 60.662 63.158 30.13 15.54 39.75 4.79
2082 3732 2.351336 GACCTTCGATCGATGGCCGT 62.351 60.000 36.68 24.26 41.49 5.68
2083 3733 1.661821 GACCTTCGATCGATGGCCG 60.662 63.158 36.68 21.24 41.49 6.13
2084 3734 1.661821 CGACCTTCGATCGATGGCC 60.662 63.158 36.68 29.48 43.74 5.36
2085 3735 1.661821 CCGACCTTCGATCGATGGC 60.662 63.158 36.68 29.12 43.74 4.40
2086 3736 1.661821 GCCGACCTTCGATCGATGG 60.662 63.158 35.69 35.69 43.74 3.51
2087 3737 2.011349 CGCCGACCTTCGATCGATG 61.011 63.158 20.18 20.53 43.74 3.84
2088 3738 1.516365 ATCGCCGACCTTCGATCGAT 61.516 55.000 20.18 3.58 43.74 3.59
2089 3739 2.184830 ATCGCCGACCTTCGATCGA 61.185 57.895 15.15 15.15 43.74 3.59
2090 3740 2.011349 CATCGCCGACCTTCGATCG 61.011 63.158 9.36 9.36 43.74 3.69
2091 3741 0.248907 TTCATCGCCGACCTTCGATC 60.249 55.000 0.00 0.00 43.74 3.69
2092 3742 0.249073 CTTCATCGCCGACCTTCGAT 60.249 55.000 0.00 0.00 43.74 3.59
2093 3743 1.138883 CTTCATCGCCGACCTTCGA 59.861 57.895 0.00 0.00 43.74 3.71
2094 3744 1.878522 CCTTCATCGCCGACCTTCG 60.879 63.158 0.00 0.00 40.07 3.79
2095 3745 2.174319 GCCTTCATCGCCGACCTTC 61.174 63.158 0.00 0.00 0.00 3.46
2096 3746 2.125106 GCCTTCATCGCCGACCTT 60.125 61.111 0.00 0.00 0.00 3.50
2097 3747 4.514577 CGCCTTCATCGCCGACCT 62.515 66.667 0.00 0.00 0.00 3.85
2099 3749 4.508128 TCCGCCTTCATCGCCGAC 62.508 66.667 0.00 0.00 0.00 4.79
2100 3750 4.207281 CTCCGCCTTCATCGCCGA 62.207 66.667 0.00 0.00 0.00 5.54
2101 3751 3.506059 ATCTCCGCCTTCATCGCCG 62.506 63.158 0.00 0.00 0.00 6.46
2102 3752 1.958205 CATCTCCGCCTTCATCGCC 60.958 63.158 0.00 0.00 0.00 5.54
2103 3753 1.958205 CCATCTCCGCCTTCATCGC 60.958 63.158 0.00 0.00 0.00 4.58
2104 3754 1.958205 GCCATCTCCGCCTTCATCG 60.958 63.158 0.00 0.00 0.00 3.84
2105 3755 1.958205 CGCCATCTCCGCCTTCATC 60.958 63.158 0.00 0.00 0.00 2.92
2106 3756 2.109799 CGCCATCTCCGCCTTCAT 59.890 61.111 0.00 0.00 0.00 2.57
2107 3757 3.371097 GACGCCATCTCCGCCTTCA 62.371 63.158 0.00 0.00 0.00 3.02
2108 3758 2.586357 GACGCCATCTCCGCCTTC 60.586 66.667 0.00 0.00 0.00 3.46
2109 3759 4.162690 GGACGCCATCTCCGCCTT 62.163 66.667 0.00 0.00 0.00 4.35
2130 3780 3.145551 GCTTAGTCGCCCTCGGGA 61.146 66.667 6.08 0.00 37.50 5.14
2131 3781 4.570663 CGCTTAGTCGCCCTCGGG 62.571 72.222 0.00 0.00 36.13 5.14
2132 3782 4.570663 CCGCTTAGTCGCCCTCGG 62.571 72.222 0.00 0.00 36.13 4.63
2134 3784 4.893601 GGCCGCTTAGTCGCCCTC 62.894 72.222 0.00 0.00 0.00 4.30
2140 3790 2.744709 TTTGGCGGCCGCTTAGTC 60.745 61.111 45.23 30.33 41.60 2.59
2141 3791 2.746277 CTTTGGCGGCCGCTTAGT 60.746 61.111 45.23 0.00 41.60 2.24
2142 3792 2.332654 AACTTTGGCGGCCGCTTAG 61.333 57.895 45.23 36.79 41.60 2.18
2143 3793 2.281900 AACTTTGGCGGCCGCTTA 60.282 55.556 45.23 32.62 41.60 3.09
2144 3794 3.977244 CAACTTTGGCGGCCGCTT 61.977 61.111 45.23 30.47 41.60 4.68
2147 3797 4.277593 TTGCAACTTTGGCGGCCG 62.278 61.111 24.05 24.05 0.00 6.13
2148 3798 1.801309 TACTTGCAACTTTGGCGGCC 61.801 55.000 13.32 13.32 0.00 6.13
2149 3799 0.031449 TTACTTGCAACTTTGGCGGC 59.969 50.000 0.00 0.00 0.00 6.53
2150 3800 1.601914 GGTTACTTGCAACTTTGGCGG 60.602 52.381 0.00 0.00 0.00 6.13
2151 3801 1.066303 TGGTTACTTGCAACTTTGGCG 59.934 47.619 0.00 0.00 0.00 5.69
2152 3802 2.360801 TCTGGTTACTTGCAACTTTGGC 59.639 45.455 0.00 0.00 0.00 4.52
2153 3803 3.380004 TGTCTGGTTACTTGCAACTTTGG 59.620 43.478 0.00 0.00 0.00 3.28
2154 3804 4.096382 ACTGTCTGGTTACTTGCAACTTTG 59.904 41.667 0.00 0.00 0.00 2.77
2155 3805 4.270008 ACTGTCTGGTTACTTGCAACTTT 58.730 39.130 0.00 0.00 0.00 2.66
2156 3806 3.886123 ACTGTCTGGTTACTTGCAACTT 58.114 40.909 0.00 0.00 0.00 2.66
2157 3807 3.560636 ACTGTCTGGTTACTTGCAACT 57.439 42.857 0.00 0.00 0.00 3.16
2158 3808 4.095782 TCAAACTGTCTGGTTACTTGCAAC 59.904 41.667 0.00 0.00 0.00 4.17
2159 3809 4.265893 TCAAACTGTCTGGTTACTTGCAA 58.734 39.130 0.00 0.00 0.00 4.08
2160 3810 3.879998 TCAAACTGTCTGGTTACTTGCA 58.120 40.909 0.00 0.00 0.00 4.08
2161 3811 4.893424 TTCAAACTGTCTGGTTACTTGC 57.107 40.909 0.00 0.00 0.00 4.01
2195 3845 1.227089 CACTCCTCTTCGATGGGCG 60.227 63.158 0.00 0.00 42.69 6.13
2196 3846 1.522580 GCACTCCTCTTCGATGGGC 60.523 63.158 0.00 0.00 0.00 5.36
2197 3847 1.227089 CGCACTCCTCTTCGATGGG 60.227 63.158 0.00 0.00 0.00 4.00
2198 3848 1.880340 GCGCACTCCTCTTCGATGG 60.880 63.158 0.30 0.00 0.00 3.51
2199 3849 1.140589 AGCGCACTCCTCTTCGATG 59.859 57.895 11.47 0.00 0.00 3.84
2200 3850 1.140589 CAGCGCACTCCTCTTCGAT 59.859 57.895 11.47 0.00 0.00 3.59
2201 3851 1.524008 TTCAGCGCACTCCTCTTCGA 61.524 55.000 11.47 0.00 0.00 3.71
2202 3852 0.459237 ATTCAGCGCACTCCTCTTCG 60.459 55.000 11.47 0.00 0.00 3.79
2203 3853 1.285578 GATTCAGCGCACTCCTCTTC 58.714 55.000 11.47 0.00 0.00 2.87
2204 3854 0.610174 TGATTCAGCGCACTCCTCTT 59.390 50.000 11.47 0.00 0.00 2.85
2205 3855 0.829333 ATGATTCAGCGCACTCCTCT 59.171 50.000 11.47 0.00 0.00 3.69
2206 3856 2.515926 TATGATTCAGCGCACTCCTC 57.484 50.000 11.47 0.00 0.00 3.71
2207 3857 2.169352 ACTTATGATTCAGCGCACTCCT 59.831 45.455 11.47 0.00 0.00 3.69
2208 3858 2.555199 ACTTATGATTCAGCGCACTCC 58.445 47.619 11.47 0.00 0.00 3.85
2209 3859 4.606457 AAACTTATGATTCAGCGCACTC 57.394 40.909 11.47 0.37 0.00 3.51
2210 3860 6.489675 CAATAAACTTATGATTCAGCGCACT 58.510 36.000 11.47 0.00 0.00 4.40
2211 3861 5.172053 GCAATAAACTTATGATTCAGCGCAC 59.828 40.000 11.47 0.00 0.00 5.34
2212 3862 5.273170 GCAATAAACTTATGATTCAGCGCA 58.727 37.500 11.47 0.00 0.00 6.09
2213 3863 4.376861 CGCAATAAACTTATGATTCAGCGC 59.623 41.667 0.00 0.00 33.84 5.92
2214 3864 5.737353 TCGCAATAAACTTATGATTCAGCG 58.263 37.500 0.00 0.00 41.39 5.18
2215 3865 7.058806 CGATTCGCAATAAACTTATGATTCAGC 59.941 37.037 0.00 0.00 0.00 4.26
2216 3866 8.064222 ACGATTCGCAATAAACTTATGATTCAG 58.936 33.333 5.86 0.00 0.00 3.02
2217 3867 7.915508 ACGATTCGCAATAAACTTATGATTCA 58.084 30.769 5.86 0.00 0.00 2.57
2218 3868 7.530861 GGACGATTCGCAATAAACTTATGATTC 59.469 37.037 5.86 0.00 0.00 2.52
2219 3869 7.352739 GGACGATTCGCAATAAACTTATGATT 58.647 34.615 5.86 0.00 0.00 2.57
2220 3870 6.346598 CGGACGATTCGCAATAAACTTATGAT 60.347 38.462 5.86 0.00 0.00 2.45
2221 3871 5.051307 CGGACGATTCGCAATAAACTTATGA 60.051 40.000 5.86 0.00 0.00 2.15
2222 3872 5.130519 CGGACGATTCGCAATAAACTTATG 58.869 41.667 5.86 0.00 0.00 1.90
2223 3873 4.210537 CCGGACGATTCGCAATAAACTTAT 59.789 41.667 5.86 0.00 0.00 1.73
2224 3874 3.552699 CCGGACGATTCGCAATAAACTTA 59.447 43.478 5.86 0.00 0.00 2.24
2225 3875 2.350498 CCGGACGATTCGCAATAAACTT 59.650 45.455 5.86 0.00 0.00 2.66
2226 3876 1.931172 CCGGACGATTCGCAATAAACT 59.069 47.619 5.86 0.00 0.00 2.66
2227 3877 1.928503 TCCGGACGATTCGCAATAAAC 59.071 47.619 0.00 0.00 0.00 2.01
2228 3878 2.198406 CTCCGGACGATTCGCAATAAA 58.802 47.619 0.00 0.00 0.00 1.40
2229 3879 1.537348 CCTCCGGACGATTCGCAATAA 60.537 52.381 0.00 0.00 0.00 1.40
2230 3880 0.031585 CCTCCGGACGATTCGCAATA 59.968 55.000 0.00 0.00 0.00 1.90
2231 3881 1.227263 CCTCCGGACGATTCGCAAT 60.227 57.895 0.00 0.00 0.00 3.56
2232 3882 2.183300 CCTCCGGACGATTCGCAA 59.817 61.111 0.00 0.00 0.00 4.85
2233 3883 3.833645 CCCTCCGGACGATTCGCA 61.834 66.667 0.00 0.00 0.00 5.10
2234 3884 3.769875 GACCCTCCGGACGATTCGC 62.770 68.421 0.00 0.00 0.00 4.70
2235 3885 2.412112 GACCCTCCGGACGATTCG 59.588 66.667 0.00 4.14 0.00 3.34
2236 3886 2.056223 TGGACCCTCCGGACGATTC 61.056 63.158 0.00 0.00 40.17 2.52
2237 3887 2.038329 TGGACCCTCCGGACGATT 59.962 61.111 0.00 0.00 40.17 3.34
2238 3888 2.758737 GTGGACCCTCCGGACGAT 60.759 66.667 0.00 0.00 40.17 3.73
2244 3894 3.195591 CTATCGCGTGGACCCTCCG 62.196 68.421 5.77 0.00 40.17 4.63
2245 3895 2.728817 CTATCGCGTGGACCCTCC 59.271 66.667 5.77 0.00 36.96 4.30
2246 3896 2.027751 GCTATCGCGTGGACCCTC 59.972 66.667 5.77 0.00 0.00 4.30
2247 3897 3.537874 GGCTATCGCGTGGACCCT 61.538 66.667 5.77 0.00 36.88 4.34
2248 3898 4.603946 GGGCTATCGCGTGGACCC 62.604 72.222 5.77 10.19 36.88 4.46
2249 3899 4.603946 GGGGCTATCGCGTGGACC 62.604 72.222 5.77 7.23 36.88 4.46
2250 3900 2.660258 ATTGGGGCTATCGCGTGGAC 62.660 60.000 5.77 0.00 36.88 4.02
2251 3901 2.377628 GATTGGGGCTATCGCGTGGA 62.378 60.000 5.77 0.00 36.88 4.02
2252 3902 1.961277 GATTGGGGCTATCGCGTGG 60.961 63.158 5.77 0.00 36.88 4.94
2253 3903 0.946221 GAGATTGGGGCTATCGCGTG 60.946 60.000 5.77 0.00 36.88 5.34
2254 3904 1.367840 GAGATTGGGGCTATCGCGT 59.632 57.895 5.77 0.00 36.88 6.01
2255 3905 0.249868 TTGAGATTGGGGCTATCGCG 60.250 55.000 0.00 0.00 36.88 5.87
2256 3906 1.517242 CTTGAGATTGGGGCTATCGC 58.483 55.000 0.00 0.00 0.00 4.58
2257 3907 1.517242 GCTTGAGATTGGGGCTATCG 58.483 55.000 0.00 0.00 0.00 2.92
2258 3908 1.143684 TGGCTTGAGATTGGGGCTATC 59.856 52.381 0.00 0.00 0.00 2.08
2259 3909 1.133668 GTGGCTTGAGATTGGGGCTAT 60.134 52.381 0.00 0.00 0.00 2.97
2260 3910 0.255890 GTGGCTTGAGATTGGGGCTA 59.744 55.000 0.00 0.00 0.00 3.93
2261 3911 1.000396 GTGGCTTGAGATTGGGGCT 60.000 57.895 0.00 0.00 0.00 5.19
2262 3912 1.304381 TGTGGCTTGAGATTGGGGC 60.304 57.895 0.00 0.00 0.00 5.80
2263 3913 0.682209 CCTGTGGCTTGAGATTGGGG 60.682 60.000 0.00 0.00 0.00 4.96
2264 3914 0.682209 CCCTGTGGCTTGAGATTGGG 60.682 60.000 0.00 0.00 0.00 4.12
2265 3915 0.682209 CCCCTGTGGCTTGAGATTGG 60.682 60.000 0.00 0.00 0.00 3.16
2266 3916 2.877975 CCCCTGTGGCTTGAGATTG 58.122 57.895 0.00 0.00 0.00 2.67
2276 3926 2.218603 GAAATATACACGCCCCTGTGG 58.781 52.381 0.00 0.00 44.21 4.17
2277 3927 1.864711 CGAAATATACACGCCCCTGTG 59.135 52.381 0.00 0.00 45.41 3.66
2278 3928 1.808891 GCGAAATATACACGCCCCTGT 60.809 52.381 0.00 0.00 45.35 4.00
2279 3929 0.865769 GCGAAATATACACGCCCCTG 59.134 55.000 0.00 0.00 45.35 4.45
2280 3930 3.300711 GCGAAATATACACGCCCCT 57.699 52.632 0.00 0.00 45.35 4.79
2403 4090 2.105930 GGCGAGCTCGATCTTGCT 59.894 61.111 38.74 12.14 41.96 3.91
3167 4869 2.682155 TCAAACCCAAAACCTGCAAC 57.318 45.000 0.00 0.00 0.00 4.17
3213 4915 0.889306 AGAGCGCCGTAAGAGAACTT 59.111 50.000 2.29 0.00 43.02 2.66
3214 4916 0.889306 AAGAGCGCCGTAAGAGAACT 59.111 50.000 2.29 0.00 43.02 3.01
3242 4944 1.248101 TGTCTTCCCTCGCGACATGA 61.248 55.000 3.71 0.00 33.15 3.07
3272 4974 7.576451 GCACAGAGCTCTGAAGACATCTTCT 62.576 48.000 42.76 18.38 46.59 2.85
3572 5274 4.558226 ATCTTGTTCCTGCATCACACTA 57.442 40.909 0.00 0.00 0.00 2.74
3650 5352 3.381272 CAGGTGTGTCCAACAATGACTTT 59.619 43.478 0.00 0.00 41.57 2.66
3883 5585 5.858381 GCCATATTGGACAATGAGAGTAGA 58.142 41.667 7.76 0.00 40.96 2.59
3970 5673 0.811616 GCATTGTAGACAGGCCCTCG 60.812 60.000 0.00 0.00 0.00 4.63
4026 5729 6.656632 TTCATAAAGAGATGATACGCCTCT 57.343 37.500 0.00 0.00 38.79 3.69
4157 5862 1.173913 AGCGCCTCACCAAATTTACC 58.826 50.000 2.29 0.00 0.00 2.85
4375 6082 2.421388 GCAGTTAGCCATGACACCCATA 60.421 50.000 0.00 0.00 37.23 2.74
4591 8911 5.376625 TGAAGCTAATGACAAAGTGGTCTT 58.623 37.500 0.00 0.00 38.61 3.01
4686 9007 2.030628 GTCGATCAGTAAGCCTAGCTCC 60.031 54.545 0.00 0.00 38.25 4.70
4786 9107 5.631992 GTCGAACATGAAAAGGGAAATCTC 58.368 41.667 0.00 0.00 0.00 2.75
4979 9704 2.849880 TTGCAAGTTTCAGTCACAGC 57.150 45.000 0.00 0.00 0.00 4.40
5017 9742 2.029623 AGGCATTGATCATGGAGTTGC 58.970 47.619 0.00 0.00 32.81 4.17
5046 9771 1.734137 CTTCATCATGCAGCCTGGC 59.266 57.895 11.65 11.65 0.00 4.85
5309 10035 2.162208 ACATGCTAAATCAACAGCCACG 59.838 45.455 0.00 0.00 36.95 4.94
5618 10399 4.697352 GTGGAAGAACATACATGCAAGAGT 59.303 41.667 0.00 0.00 0.00 3.24
5683 10464 5.136828 AGAACAACATACACAACAATGGGA 58.863 37.500 0.00 0.00 32.82 4.37
5752 10533 8.532977 AAATGTACATTTTACAACATCTTGGC 57.467 30.769 24.88 0.00 37.74 4.52
5911 12030 7.214467 TGAAAATACACCTTAAAGCTTCAGG 57.786 36.000 18.97 18.97 0.00 3.86
5976 12095 6.702449 AAGCATTCACCCTGTATATATGGA 57.298 37.500 0.00 0.00 0.00 3.41
5984 12103 2.196595 AGCCTAAGCATTCACCCTGTA 58.803 47.619 0.00 0.00 43.56 2.74
5985 12104 0.995024 AGCCTAAGCATTCACCCTGT 59.005 50.000 0.00 0.00 43.56 4.00
6070 12189 9.193806 ACCAAAGAAGTTATATCTCCGTACTTA 57.806 33.333 0.00 0.00 0.00 2.24
6076 12195 9.420551 GGTAATACCAAAGAAGTTATATCTCCG 57.579 37.037 4.24 0.00 38.42 4.63
6090 12209 7.492344 GCAATTCTTTCATGGGTAATACCAAAG 59.508 37.037 12.03 11.75 45.13 2.77
6186 12321 9.955102 AATATCTTCTTTTTACCGGTAAGTTCT 57.045 29.630 25.25 9.92 0.00 3.01
6193 12328 7.848128 TCTGAGAATATCTTCTTTTTACCGGT 58.152 34.615 13.98 13.98 41.87 5.28
6435 12680 6.811170 TCAACTTTGTTTTCTTAAACTGCAGG 59.189 34.615 19.93 0.00 43.25 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.