Multiple sequence alignment - TraesCS6D01G301300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G301300 chr6D 100.000 6698 0 0 1 6698 411203810 411210507 0.000000e+00 12369.0
1 TraesCS6D01G301300 chr6D 83.178 214 29 6 490 699 445802945 445802735 8.870000e-44 189.0
2 TraesCS6D01G301300 chr6B 90.279 2469 124 50 3881 6271 618128111 618130541 0.000000e+00 3123.0
3 TraesCS6D01G301300 chr6B 94.484 1396 56 9 2564 3947 618126729 618128115 0.000000e+00 2132.0
4 TraesCS6D01G301300 chr6B 87.885 974 71 24 821 1776 618125074 618126018 0.000000e+00 1101.0
5 TraesCS6D01G301300 chr6B 87.872 437 34 5 2088 2505 618126293 618126729 4.670000e-136 496.0
6 TraesCS6D01G301300 chr6B 84.571 350 28 11 6352 6698 618130539 618130865 2.330000e-84 324.0
7 TraesCS6D01G301300 chr6B 89.407 236 14 2 1864 2090 618126015 618126248 3.060000e-73 287.0
8 TraesCS6D01G301300 chr6B 92.632 95 7 0 6265 6359 8403638 8403544 3.260000e-28 137.0
9 TraesCS6D01G301300 chr6A 90.900 2000 101 36 4187 6125 555971381 555973360 0.000000e+00 2610.0
10 TraesCS6D01G301300 chr6A 92.475 1515 68 15 2613 4122 555969896 555971369 0.000000e+00 2124.0
11 TraesCS6D01G301300 chr6A 87.077 1594 120 36 764 2303 555967943 555969504 0.000000e+00 1724.0
12 TraesCS6D01G301300 chr6A 91.477 352 25 4 6352 6698 555973540 555973891 4.700000e-131 479.0
13 TraesCS6D01G301300 chr6A 87.467 383 35 4 1 372 604473738 604474118 4.800000e-116 429.0
14 TraesCS6D01G301300 chr6A 93.130 262 15 2 2386 2644 555969634 555969895 1.360000e-101 381.0
15 TraesCS6D01G301300 chr6A 85.526 152 13 5 6127 6271 555973393 555973542 4.180000e-32 150.0
16 TraesCS6D01G301300 chr6A 95.455 88 4 0 6267 6354 103761898 103761985 2.520000e-29 141.0
17 TraesCS6D01G301300 chr6A 96.970 33 1 0 6173 6205 80691981 80691949 1.000000e-03 56.5
18 TraesCS6D01G301300 chr1D 81.947 637 70 27 101 699 79107436 79108065 1.300000e-136 497.0
19 TraesCS6D01G301300 chr1D 80.096 628 81 22 109 695 365052743 365052119 1.730000e-115 427.0
20 TraesCS6D01G301300 chr5A 78.735 743 109 38 4 700 523589699 523588960 1.020000e-122 451.0
21 TraesCS6D01G301300 chr5A 92.708 96 6 1 6263 6358 458337348 458337254 3.260000e-28 137.0
22 TraesCS6D01G301300 chr5A 92.632 95 6 1 6267 6361 13410013 13409920 1.170000e-27 135.0
23 TraesCS6D01G301300 chr5A 92.632 95 5 2 6259 6353 632901209 632901301 1.170000e-27 135.0
24 TraesCS6D01G301300 chr4D 92.000 325 18 4 3 319 3855878 3855554 3.680000e-122 449.0
25 TraesCS6D01G301300 chr4D 88.433 268 27 2 108 372 494854540 494854806 3.010000e-83 320.0
26 TraesCS6D01G301300 chr4D 86.364 154 19 2 514 665 3848787 3848634 4.150000e-37 167.0
27 TraesCS6D01G301300 chr4D 96.970 33 1 0 6173 6205 454805129 454805161 1.000000e-03 56.5
28 TraesCS6D01G301300 chr1B 80.744 618 81 20 100 695 96506458 96507059 1.320000e-121 448.0
29 TraesCS6D01G301300 chr1B 88.991 109 4 5 1 101 96504501 96504609 1.960000e-25 128.0
30 TraesCS6D01G301300 chr1B 87.850 107 4 9 1 99 567201392 567201287 4.240000e-22 117.0
31 TraesCS6D01G301300 chr3A 88.088 319 31 2 8 319 205711405 205711723 8.200000e-99 372.0
32 TraesCS6D01G301300 chr3A 84.942 259 34 3 445 698 419812301 419812043 2.400000e-64 257.0
33 TraesCS6D01G301300 chr3A 89.241 158 16 1 1 157 602002149 602002306 5.300000e-46 196.0
34 TraesCS6D01G301300 chr3A 91.919 99 7 1 6263 6361 720848425 720848328 3.260000e-28 137.0
35 TraesCS6D01G301300 chr2B 85.185 351 28 12 35 372 108653803 108654142 8.320000e-89 339.0
36 TraesCS6D01G301300 chr7D 84.100 239 35 2 460 695 79613697 79613459 1.880000e-55 228.0
37 TraesCS6D01G301300 chr7D 87.069 116 7 6 1 108 438062724 438062609 2.540000e-24 124.0
38 TraesCS6D01G301300 chr2D 83.401 247 35 6 454 697 118039687 118039444 2.430000e-54 224.0
39 TraesCS6D01G301300 chr2D 90.476 105 10 0 6254 6358 217496892 217496996 9.060000e-29 139.0
40 TraesCS6D01G301300 chr2D 89.623 106 9 2 6249 6353 15192862 15192966 4.210000e-27 134.0
41 TraesCS6D01G301300 chr2D 91.753 97 7 1 6265 6361 164992680 164992775 4.210000e-27 134.0
42 TraesCS6D01G301300 chr2D 89.109 101 9 2 1 100 192210328 192210229 2.540000e-24 124.0
43 TraesCS6D01G301300 chr2D 88.889 108 3 3 1 100 314230408 314230302 2.540000e-24 124.0
44 TraesCS6D01G301300 chr2D 100.000 28 0 0 6173 6200 18470203 18470230 1.200000e-02 52.8
45 TraesCS6D01G301300 chr3D 80.769 260 42 8 442 697 351284945 351284690 5.300000e-46 196.0
46 TraesCS6D01G301300 chr3D 87.156 109 6 4 1 101 98597173 98597065 4.240000e-22 117.0
47 TraesCS6D01G301300 chr2A 83.105 219 33 3 456 671 615700554 615700771 5.300000e-46 196.0
48 TraesCS6D01G301300 chr2A 80.162 247 44 5 454 697 680295529 680295285 5.340000e-41 180.0
49 TraesCS6D01G301300 chr5D 79.762 252 45 5 448 696 356897755 356898003 1.920000e-40 178.0
50 TraesCS6D01G301300 chr4A 80.841 214 36 5 487 697 429756415 429756204 5.370000e-36 163.0
51 TraesCS6D01G301300 chr7A 82.707 133 22 1 727 858 642522697 642522565 4.240000e-22 117.0
52 TraesCS6D01G301300 chr7B 84.821 112 16 1 727 837 604366304 604366193 1.970000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G301300 chr6D 411203810 411210507 6697 False 12369.000000 12369 100.0000 1 6698 1 chr6D.!!$F1 6697
1 TraesCS6D01G301300 chr6B 618125074 618130865 5791 False 1243.833333 3123 89.0830 821 6698 6 chr6B.!!$F1 5877
2 TraesCS6D01G301300 chr6A 555967943 555973891 5948 False 1244.666667 2610 90.0975 764 6698 6 chr6A.!!$F3 5934
3 TraesCS6D01G301300 chr1D 79107436 79108065 629 False 497.000000 497 81.9470 101 699 1 chr1D.!!$F1 598
4 TraesCS6D01G301300 chr1D 365052119 365052743 624 True 427.000000 427 80.0960 109 695 1 chr1D.!!$R1 586
5 TraesCS6D01G301300 chr5A 523588960 523589699 739 True 451.000000 451 78.7350 4 700 1 chr5A.!!$R3 696
6 TraesCS6D01G301300 chr1B 96504501 96507059 2558 False 288.000000 448 84.8675 1 695 2 chr1B.!!$F1 694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 1969 0.033504 CTGTTCAGCCACTGTACGGT 59.966 55.000 0.04 0.04 35.11 4.83 F
557 2509 0.172352 ATGTAAATTTGCACCGCGGG 59.828 50.000 31.76 19.49 0.00 6.13 F
1786 3802 0.109226 AGCAACGAGTTAGAGCCGAC 60.109 55.000 0.00 0.00 0.00 4.79 F
1787 3803 1.077089 GCAACGAGTTAGAGCCGACC 61.077 60.000 0.00 0.00 0.00 4.79 F
1844 3865 1.112113 AAGATTAGAAGCGCCCGAGA 58.888 50.000 2.29 0.00 0.00 4.04 F
3008 5229 1.277579 TATTGGCACCGGTACCTGAA 58.722 50.000 24.45 12.00 0.00 3.02 F
3097 5318 1.517242 AAGAGAAAAGAGCACAGCGG 58.483 50.000 0.00 0.00 0.00 5.52 F
3447 5679 1.546476 CTCGTCCACTTGAGGTAAGCT 59.454 52.381 0.00 0.00 40.16 3.74 F
4867 7194 1.134946 GTTGCACTGAACTTGGCTTGT 59.865 47.619 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1362 3340 0.610174 TGCAGATGACCACTCTGTCC 59.390 55.000 2.63 0.00 41.77 4.02 R
2271 4359 0.395862 TCGGGCCTTGTGTTCCAAAA 60.396 50.000 0.84 0.00 31.20 2.44 R
3229 5461 0.733729 CTCGAGTCTTAGACCACCCG 59.266 60.000 8.96 8.02 32.18 5.28 R
3413 5645 1.325355 GACGAGAATCCGGTATCCCA 58.675 55.000 0.00 0.00 0.00 4.37 R
3422 5654 1.550976 ACCTCAAGTGGACGAGAATCC 59.449 52.381 0.00 0.00 39.45 3.01 R
4578 6896 1.608590 ACCAAACAGCACCGATTTCTG 59.391 47.619 0.00 0.00 0.00 3.02 R
4740 7066 2.505819 AGAGAAACTGCGGTGGGAATAT 59.494 45.455 0.00 0.00 0.00 1.28 R
5139 7470 1.376812 CACTGCAGGCTCAGCATGA 60.377 57.895 17.29 0.00 43.36 3.07 R
6336 8752 0.264955 ACATACTCCCTCCGTCCCAT 59.735 55.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 6.488683 AGATGGTCCAAAACGAAGATGTAAAA 59.511 34.615 0.00 0.00 0.00 1.52
103 1969 0.033504 CTGTTCAGCCACTGTACGGT 59.966 55.000 0.04 0.04 35.11 4.83
135 2001 1.859427 CGACGAAGGTGGAGGAACGA 61.859 60.000 0.00 0.00 0.00 3.85
283 2150 3.936203 TTTGCCTCCGCCTCGTGT 61.936 61.111 0.00 0.00 0.00 4.49
525 2476 2.319096 CGGCCGCGGTTTTACTCAA 61.319 57.895 28.70 0.00 0.00 3.02
551 2503 6.771076 TGTATCTCGTGATGTAAATTTGCAC 58.229 36.000 11.35 7.90 34.32 4.57
553 2505 3.124466 TCTCGTGATGTAAATTTGCACCG 59.876 43.478 11.35 13.23 0.00 4.94
556 2508 1.135546 TGATGTAAATTTGCACCGCGG 60.136 47.619 26.86 26.86 0.00 6.46
557 2509 0.172352 ATGTAAATTTGCACCGCGGG 59.828 50.000 31.76 19.49 0.00 6.13
575 2528 3.605634 CGGGGTGTTGAATTCTACATCA 58.394 45.455 27.04 5.35 35.03 3.07
579 2532 4.250464 GGTGTTGAATTCTACATCACCGA 58.750 43.478 23.04 0.17 43.39 4.69
625 2580 1.194781 ATGGACCGTCTGTTGGAGCT 61.195 55.000 0.00 0.00 0.00 4.09
658 2615 5.120830 TGCTCTCGAATCTTCAAAAGTTAGC 59.879 40.000 0.00 0.00 0.00 3.09
730 2687 8.894731 ACTATATATATCTAGCAAGTGACGTGG 58.105 37.037 0.00 0.00 0.00 4.94
731 2688 7.704578 ATATATATCTAGCAAGTGACGTGGT 57.295 36.000 8.43 8.43 0.00 4.16
732 2689 8.803397 ATATATATCTAGCAAGTGACGTGGTA 57.197 34.615 9.82 9.82 0.00 3.25
733 2690 7.704578 ATATATCTAGCAAGTGACGTGGTAT 57.295 36.000 10.57 1.64 0.00 2.73
734 2691 3.503827 TCTAGCAAGTGACGTGGTATG 57.496 47.619 10.57 6.03 0.00 2.39
735 2692 2.823747 TCTAGCAAGTGACGTGGTATGT 59.176 45.455 10.57 0.00 0.00 2.29
736 2693 4.011698 TCTAGCAAGTGACGTGGTATGTA 58.988 43.478 10.57 0.00 0.00 2.29
737 2694 3.232213 AGCAAGTGACGTGGTATGTAG 57.768 47.619 0.50 0.00 0.00 2.74
738 2695 2.094182 AGCAAGTGACGTGGTATGTAGG 60.094 50.000 0.50 0.00 0.00 3.18
739 2696 2.888594 CAAGTGACGTGGTATGTAGGG 58.111 52.381 0.00 0.00 0.00 3.53
740 2697 2.494471 CAAGTGACGTGGTATGTAGGGA 59.506 50.000 0.00 0.00 0.00 4.20
741 2698 2.811410 AGTGACGTGGTATGTAGGGAA 58.189 47.619 0.00 0.00 0.00 3.97
742 2699 2.494870 AGTGACGTGGTATGTAGGGAAC 59.505 50.000 0.00 0.00 0.00 3.62
744 2701 3.696051 GTGACGTGGTATGTAGGGAACTA 59.304 47.826 0.00 0.00 43.67 2.24
745 2702 4.340381 GTGACGTGGTATGTAGGGAACTAT 59.660 45.833 0.00 0.00 46.56 2.12
746 2703 5.532406 GTGACGTGGTATGTAGGGAACTATA 59.468 44.000 0.00 0.00 46.56 1.31
747 2704 6.208204 GTGACGTGGTATGTAGGGAACTATAT 59.792 42.308 0.00 0.00 46.56 0.86
748 2705 6.779049 TGACGTGGTATGTAGGGAACTATATT 59.221 38.462 0.00 0.00 46.56 1.28
749 2706 7.288389 TGACGTGGTATGTAGGGAACTATATTT 59.712 37.037 0.00 0.00 46.56 1.40
750 2707 8.710749 ACGTGGTATGTAGGGAACTATATTTA 57.289 34.615 0.00 0.00 46.56 1.40
751 2708 9.146586 ACGTGGTATGTAGGGAACTATATTTAA 57.853 33.333 0.00 0.00 46.56 1.52
775 2732 7.816945 ATTTGCTTGTATGAACTATGTTTGC 57.183 32.000 0.00 0.00 0.00 3.68
839 2796 5.553123 TCAAATTAAGTAAGAACTCCGGCA 58.447 37.500 0.00 0.00 33.75 5.69
887 2844 6.344079 CGGTTCGTTACGGTAAACAAAATTTG 60.344 38.462 4.53 3.89 0.00 2.32
895 2852 3.666797 GGTAAACAAAATTTGCGAGACGG 59.333 43.478 5.52 0.00 0.00 4.79
1145 3109 1.941812 CTTCGGCTCAAACGCTTGT 59.058 52.632 0.00 0.00 33.94 3.16
1312 3276 2.988839 ATTCCCTGCCCTGCCTGTC 61.989 63.158 0.00 0.00 0.00 3.51
1377 3355 1.153549 GGCGGACAGAGTGGTCATC 60.154 63.158 0.00 0.00 39.59 2.92
1402 3380 1.758862 ACCTGGTATGCGTAGGGTTAC 59.241 52.381 0.00 0.00 35.89 2.50
1426 3404 6.708949 ACGATAAACACACCTTTGTAGTGATT 59.291 34.615 0.00 0.00 38.63 2.57
1445 3445 5.464389 GTGATTCATAATGGCCTGATTTTGC 59.536 40.000 3.32 0.00 0.00 3.68
1553 3558 4.960938 TGCCTTTATCCAGTACATAGCAG 58.039 43.478 0.00 0.00 0.00 4.24
1557 3562 0.681733 ATCCAGTACATAGCAGCCCG 59.318 55.000 0.00 0.00 0.00 6.13
1601 3606 3.967987 ACCTTGACCACATAGGGAGATAC 59.032 47.826 0.00 0.00 43.89 2.24
1627 3632 2.673775 TGCTTGTTGATTTCAGGGGA 57.326 45.000 0.00 0.00 0.00 4.81
1629 3634 3.509442 TGCTTGTTGATTTCAGGGGATT 58.491 40.909 0.00 0.00 0.00 3.01
1714 3730 2.945447 TGCAGTTGCTATTCATTGGC 57.055 45.000 5.62 0.00 42.66 4.52
1734 3750 7.455641 TTGGCCAACTTAAAAGAAATATCGA 57.544 32.000 16.05 0.00 0.00 3.59
1776 3792 1.958205 GAGCAGTGCAGCAACGAGT 60.958 57.895 19.20 0.00 36.85 4.18
1778 3794 0.249868 AGCAGTGCAGCAACGAGTTA 60.250 50.000 19.20 0.00 36.85 2.24
1785 3801 0.109272 CAGCAACGAGTTAGAGCCGA 60.109 55.000 0.00 0.00 0.00 5.54
1786 3802 0.109226 AGCAACGAGTTAGAGCCGAC 60.109 55.000 0.00 0.00 0.00 4.79
1787 3803 1.077089 GCAACGAGTTAGAGCCGACC 61.077 60.000 0.00 0.00 0.00 4.79
1789 3805 1.930908 AACGAGTTAGAGCCGACCGG 61.931 60.000 0.00 0.00 38.57 5.28
1790 3806 2.110967 CGAGTTAGAGCCGACCGGA 61.111 63.158 9.46 0.00 37.50 5.14
1803 3819 3.646715 CCGGAGGCAGGGGTTTGA 61.647 66.667 0.00 0.00 46.14 2.69
1804 3820 2.359975 CGGAGGCAGGGGTTTGAC 60.360 66.667 0.00 0.00 0.00 3.18
1805 3821 2.035783 GGAGGCAGGGGTTTGACC 59.964 66.667 0.00 0.00 37.60 4.02
1836 3857 2.434702 TCCCCCGAGAAAGATTAGAAGC 59.565 50.000 0.00 0.00 0.00 3.86
1841 3862 1.861575 GAGAAAGATTAGAAGCGCCCG 59.138 52.381 2.29 0.00 0.00 6.13
1842 3863 1.480954 AGAAAGATTAGAAGCGCCCGA 59.519 47.619 2.29 0.00 0.00 5.14
1844 3865 1.112113 AAGATTAGAAGCGCCCGAGA 58.888 50.000 2.29 0.00 0.00 4.04
1846 3867 1.689273 AGATTAGAAGCGCCCGAGATT 59.311 47.619 2.29 0.00 0.00 2.40
1847 3868 1.795286 GATTAGAAGCGCCCGAGATTG 59.205 52.381 2.29 0.00 0.00 2.67
1860 3881 4.162690 GATTGAGCCGGGGTCGCT 62.163 66.667 20.33 10.53 32.15 4.93
1873 3894 3.387091 TCGCTGGCGAGGGCTTTA 61.387 61.111 13.78 0.00 44.01 1.85
1963 3987 2.123033 ACTGGTTTGGGTTGGGGC 60.123 61.111 0.00 0.00 0.00 5.80
1967 3991 2.200092 GTTTGGGTTGGGGCTGGA 59.800 61.111 0.00 0.00 0.00 3.86
2068 4101 1.696336 CATAGCCACATAGGTGCCTCT 59.304 52.381 0.96 1.57 43.88 3.69
2069 4102 1.414158 TAGCCACATAGGTGCCTCTC 58.586 55.000 0.96 0.00 43.88 3.20
2102 4182 5.061179 ACTGTTTTGTATGTGTGAGTACCC 58.939 41.667 0.00 0.00 0.00 3.69
2271 4359 5.410355 AACTAAATTGTTCATGCTGCCAT 57.590 34.783 0.00 0.00 0.00 4.40
2350 4521 8.447924 AATTCTTGTTCTGGTGATATGATCTG 57.552 34.615 0.00 0.00 0.00 2.90
2370 4541 9.948964 TGATCTGACTGAATATTTTCTTTCTGA 57.051 29.630 0.00 4.24 31.94 3.27
2391 4562 6.544197 TCTGAAAACATTACTGTGGTGCTTTA 59.456 34.615 0.00 0.00 35.22 1.85
2405 4576 6.095377 GTGGTGCTTTAATTTCAAGGAGATG 58.905 40.000 0.00 0.00 0.00 2.90
2406 4577 5.774690 TGGTGCTTTAATTTCAAGGAGATGT 59.225 36.000 0.00 0.00 0.00 3.06
2407 4578 6.095377 GGTGCTTTAATTTCAAGGAGATGTG 58.905 40.000 0.00 0.00 0.00 3.21
2408 4579 5.574443 GTGCTTTAATTTCAAGGAGATGTGC 59.426 40.000 0.00 0.00 0.00 4.57
2431 4613 6.314648 TGCTAAGAAGTGAGATAATGCTTGTG 59.685 38.462 0.00 0.00 0.00 3.33
2505 4687 5.799213 AGTTCCCTGAGTTTACTGATCTTG 58.201 41.667 0.00 0.00 0.00 3.02
2546 4728 5.648526 CCTGTCTGTACTGTATACTCTGTGT 59.351 44.000 4.17 0.00 0.00 3.72
2552 4734 4.098055 ACTGTATACTCTGTGTTGCTCG 57.902 45.455 4.17 0.00 0.00 5.03
2684 4898 5.352569 GTGTCCATTGTTTGTAGATCTCTGG 59.647 44.000 0.00 0.00 0.00 3.86
2724 4938 5.604565 TGGAGCATACATGTAGATTCACAG 58.395 41.667 11.91 0.00 0.00 3.66
2730 4944 6.562270 GCATACATGTAGATTCACAGTTACGC 60.562 42.308 11.91 0.00 0.00 4.42
2773 4994 1.550524 TCGGGATGACTCACTGGAAAG 59.449 52.381 0.00 0.00 0.00 2.62
2783 5004 3.838903 ACTCACTGGAAAGTAACCCTAGG 59.161 47.826 0.06 0.06 0.00 3.02
2819 5040 3.506844 GGAAAGTGTCTCCTCGTCTAACT 59.493 47.826 0.00 0.00 0.00 2.24
2858 5079 2.746472 GCGGCCTCCTTATGTCAATTCT 60.746 50.000 0.00 0.00 0.00 2.40
2987 5208 7.114811 GCTGGAACACTTGTAAATGTAATGTTG 59.885 37.037 0.00 0.00 0.00 3.33
2997 5218 8.749841 TGTAAATGTAATGTTGTTATTGGCAC 57.250 30.769 0.00 0.00 0.00 5.01
3008 5229 1.277579 TATTGGCACCGGTACCTGAA 58.722 50.000 24.45 12.00 0.00 3.02
3015 5236 3.433173 GGCACCGGTACCTGAATATTCTT 60.433 47.826 17.28 3.93 0.00 2.52
3094 5315 7.020914 ACTTTGTTAAGAGAAAAGAGCACAG 57.979 36.000 1.67 0.00 35.39 3.66
3097 5318 1.517242 AAGAGAAAAGAGCACAGCGG 58.483 50.000 0.00 0.00 0.00 5.52
3127 5348 3.994931 TCCTCTGGTAAAGGTTAAGGC 57.005 47.619 0.00 0.00 35.29 4.35
3128 5349 3.253220 TCCTCTGGTAAAGGTTAAGGCA 58.747 45.455 0.00 0.00 35.29 4.75
3129 5350 3.263425 TCCTCTGGTAAAGGTTAAGGCAG 59.737 47.826 0.00 0.00 35.29 4.85
3130 5351 3.610911 CTCTGGTAAAGGTTAAGGCAGG 58.389 50.000 0.00 0.00 0.00 4.85
3131 5352 3.253220 TCTGGTAAAGGTTAAGGCAGGA 58.747 45.455 0.00 0.00 0.00 3.86
3132 5353 3.008704 TCTGGTAAAGGTTAAGGCAGGAC 59.991 47.826 0.00 0.00 0.00 3.85
3133 5354 2.712087 TGGTAAAGGTTAAGGCAGGACA 59.288 45.455 0.00 0.00 0.00 4.02
3134 5355 3.079578 GGTAAAGGTTAAGGCAGGACAC 58.920 50.000 0.00 0.00 0.00 3.67
3135 5356 3.497227 GGTAAAGGTTAAGGCAGGACACA 60.497 47.826 0.00 0.00 0.00 3.72
3136 5357 3.525800 AAAGGTTAAGGCAGGACACAT 57.474 42.857 0.00 0.00 0.00 3.21
3137 5358 2.789409 AGGTTAAGGCAGGACACATC 57.211 50.000 0.00 0.00 0.00 3.06
3138 5359 2.269940 AGGTTAAGGCAGGACACATCT 58.730 47.619 0.00 0.00 0.00 2.90
3139 5360 2.026822 AGGTTAAGGCAGGACACATCTG 60.027 50.000 0.00 0.00 35.49 2.90
3140 5361 2.027192 GGTTAAGGCAGGACACATCTGA 60.027 50.000 0.00 0.00 34.36 3.27
3141 5362 3.370953 GGTTAAGGCAGGACACATCTGAT 60.371 47.826 0.00 0.00 34.36 2.90
3188 5420 5.216614 AGTTTGTGAAGTAGAAGTCCCTC 57.783 43.478 0.00 0.00 0.00 4.30
3229 5461 7.865706 TTTCTGAAAATTAGCCCATAGACTC 57.134 36.000 0.00 0.00 0.00 3.36
3413 5645 5.190677 TCAGTGAATGAATGCATCTGTCAT 58.809 37.500 0.00 2.72 34.02 3.06
3447 5679 1.546476 CTCGTCCACTTGAGGTAAGCT 59.454 52.381 0.00 0.00 40.16 3.74
3573 5806 9.202273 GTCTATCTCAATGTAAGCCAAAGATAG 57.798 37.037 9.25 9.25 39.57 2.08
4056 6355 7.972832 ATTCGGTCTAATACTCTGTCTCTAG 57.027 40.000 0.00 0.00 0.00 2.43
4131 6431 5.279206 CGATATGCCTGTACTCTCTTCCATT 60.279 44.000 0.00 0.00 0.00 3.16
4132 6432 4.851639 ATGCCTGTACTCTCTTCCATTT 57.148 40.909 0.00 0.00 0.00 2.32
4174 6474 7.042335 GCTCTTGTACTTTCACAGGTATATGT 58.958 38.462 0.00 0.00 0.00 2.29
4179 6479 7.544622 TGTACTTTCACAGGTATATGTCTGTC 58.455 38.462 9.06 0.42 41.71 3.51
4187 6487 5.830991 ACAGGTATATGTCTGTCCTCTCTTC 59.169 44.000 6.88 0.00 39.77 2.87
4512 6830 6.580041 GCACACTTGTATTTTTCTCATCACTG 59.420 38.462 0.00 0.00 0.00 3.66
4535 6853 6.085573 TGTTTCGCAATATGTTGATTCTGTG 58.914 36.000 6.35 0.00 37.53 3.66
4551 6869 3.041211 TCTGTGACCAGGGGATTCTATG 58.959 50.000 0.00 0.00 39.31 2.23
4578 6896 2.492019 AACTTTCTGCGGCAAAAGTC 57.508 45.000 27.35 0.00 43.14 3.01
4645 6971 7.466804 TGATAGTACCCATTTTCTTGGACTTT 58.533 34.615 0.00 0.00 39.25 2.66
4669 6995 7.194112 TGATTACAGTGGACATAAGAATGGA 57.806 36.000 0.00 0.00 37.43 3.41
4671 6997 8.274322 TGATTACAGTGGACATAAGAATGGATT 58.726 33.333 0.00 0.00 37.43 3.01
4739 7065 8.787852 CAAACTATTTTGGTTTCTCTAGAGCTT 58.212 33.333 15.35 0.00 38.82 3.74
4821 7148 3.140325 CAGAAGAACTGGGCCTAAACA 57.860 47.619 4.53 0.00 42.39 2.83
4867 7194 1.134946 GTTGCACTGAACTTGGCTTGT 59.865 47.619 0.00 0.00 0.00 3.16
4888 7215 8.872845 GCTTGTTAGAATTTGGATATTTTGTGG 58.127 33.333 0.00 0.00 0.00 4.17
4894 7221 8.310122 AGAATTTGGATATTTTGTGGCAGTAT 57.690 30.769 0.00 0.00 0.00 2.12
4985 7316 5.520649 CGAAAGCTTATTCCTTCTGTAGACC 59.479 44.000 0.00 0.00 0.00 3.85
5043 7374 3.609175 CGTCATTTCTTCAAACGCACCAT 60.609 43.478 0.00 0.00 0.00 3.55
5091 7422 4.401519 AGGGATCATGCAGACAAATTCAAG 59.598 41.667 0.00 0.00 0.00 3.02
5139 7470 2.247358 CATGGGGTAGGCAAAGTGTTT 58.753 47.619 0.00 0.00 0.00 2.83
5175 7506 3.003689 CAGTGCTTCATTTCCGTGAGTTT 59.996 43.478 0.00 0.00 0.00 2.66
5176 7507 3.003689 AGTGCTTCATTTCCGTGAGTTTG 59.996 43.478 0.00 0.00 0.00 2.93
5192 7524 5.049167 TGAGTTTGACATGAAAACCATTGC 58.951 37.500 18.68 9.05 38.10 3.56
5232 7567 8.416329 CAGTGTAGATATATATATGTGCTGCCA 58.584 37.037 10.03 0.00 0.00 4.92
5239 7574 6.813293 ATATATATGTGCTGCCATGGACTA 57.187 37.500 18.40 0.00 0.00 2.59
5315 7650 8.745590 ACCAAACATTTACCATAGGTACATTTC 58.254 33.333 0.00 0.00 37.97 2.17
5343 7678 0.717784 CGCTACAGTCTGTGCACATG 59.282 55.000 22.00 18.33 0.00 3.21
5396 7731 5.747197 GGATTAAAGAATCTGCATGCTTGTG 59.253 40.000 20.33 6.73 41.21 3.33
5468 7829 7.176865 AGACATAGCTTCAGTCAAGTGTACTTA 59.823 37.037 13.21 0.00 34.28 2.24
5471 7832 9.973450 CATAGCTTCAGTCAAGTGTACTTATAT 57.027 33.333 0.00 0.00 34.28 0.86
5537 7901 0.250901 ACAGATTCGCCTGCCTGTTT 60.251 50.000 0.00 0.00 36.57 2.83
5545 7909 1.648720 CCTGCCTGTTTGTGTGTCG 59.351 57.895 0.00 0.00 0.00 4.35
5664 8028 3.425578 GCACACGCTACTGATCACT 57.574 52.632 0.00 0.00 34.30 3.41
5688 8052 0.734942 ACGGCGTGGAAATACTGACG 60.735 55.000 13.76 0.00 34.93 4.35
5744 8108 0.322816 GAGTGAAAGGCTGGATGGCA 60.323 55.000 0.00 0.00 44.55 4.92
5750 8114 4.864334 GGCTGGATGGCAGGGACG 62.864 72.222 0.00 0.00 41.37 4.79
5760 8124 2.046892 CAGGGACGGCAGAACCTG 60.047 66.667 14.35 14.35 43.87 4.00
5986 8362 2.622942 TGATTGAGTTGGTTGGTTCTGC 59.377 45.455 0.00 0.00 0.00 4.26
5989 8365 0.818040 GAGTTGGTTGGTTCTGCGGT 60.818 55.000 0.00 0.00 0.00 5.68
6033 8411 4.211794 CGCATTTGTTGGCAGAAAGAAATT 59.788 37.500 0.00 0.00 32.43 1.82
6065 8444 6.095440 TGCTTTGCTTTATTGATACTTCTCCC 59.905 38.462 0.00 0.00 0.00 4.30
6155 8565 7.217200 GTGCTATGTATTTCTATGAAGGTCCA 58.783 38.462 0.00 0.00 0.00 4.02
6162 8572 8.328758 TGTATTTCTATGAAGGTCCAGACATTT 58.671 33.333 0.00 0.00 35.27 2.32
6163 8573 9.178758 GTATTTCTATGAAGGTCCAGACATTTT 57.821 33.333 0.00 0.00 35.27 1.82
6164 8574 8.655935 ATTTCTATGAAGGTCCAGACATTTTT 57.344 30.769 0.00 0.00 35.27 1.94
6277 8693 8.135382 ACATACACATGTATACTATTCCCTCC 57.865 38.462 0.00 0.00 43.74 4.30
6278 8694 5.723672 ACACATGTATACTATTCCCTCCG 57.276 43.478 0.00 0.00 0.00 4.63
6279 8695 5.145564 ACACATGTATACTATTCCCTCCGT 58.854 41.667 0.00 0.00 0.00 4.69
6280 8696 5.243283 ACACATGTATACTATTCCCTCCGTC 59.757 44.000 0.00 0.00 0.00 4.79
6281 8697 4.771054 ACATGTATACTATTCCCTCCGTCC 59.229 45.833 0.00 0.00 0.00 4.79
6282 8698 3.771216 TGTATACTATTCCCTCCGTCCC 58.229 50.000 4.17 0.00 0.00 4.46
6283 8699 3.140707 TGTATACTATTCCCTCCGTCCCA 59.859 47.826 4.17 0.00 0.00 4.37
6284 8700 3.562108 ATACTATTCCCTCCGTCCCAT 57.438 47.619 0.00 0.00 0.00 4.00
6285 8701 4.687262 ATACTATTCCCTCCGTCCCATA 57.313 45.455 0.00 0.00 0.00 2.74
6286 8702 3.339713 ACTATTCCCTCCGTCCCATAA 57.660 47.619 0.00 0.00 0.00 1.90
6287 8703 3.870559 ACTATTCCCTCCGTCCCATAAT 58.129 45.455 0.00 0.00 0.00 1.28
6288 8704 5.019657 ACTATTCCCTCCGTCCCATAATA 57.980 43.478 0.00 0.00 0.00 0.98
6289 8705 5.600749 ACTATTCCCTCCGTCCCATAATAT 58.399 41.667 0.00 0.00 0.00 1.28
6290 8706 6.748969 ACTATTCCCTCCGTCCCATAATATA 58.251 40.000 0.00 0.00 0.00 0.86
6291 8707 7.194050 ACTATTCCCTCCGTCCCATAATATAA 58.806 38.462 0.00 0.00 0.00 0.98
6292 8708 6.561519 ATTCCCTCCGTCCCATAATATAAG 57.438 41.667 0.00 0.00 0.00 1.73
6293 8709 5.279562 TCCCTCCGTCCCATAATATAAGA 57.720 43.478 0.00 0.00 0.00 2.10
6294 8710 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
6295 8711 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
6296 8712 5.247564 CCCTCCGTCCCATAATATAAGAACA 59.752 44.000 0.00 0.00 0.00 3.18
6297 8713 6.070194 CCCTCCGTCCCATAATATAAGAACAT 60.070 42.308 0.00 0.00 0.00 2.71
6298 8714 7.394816 CCTCCGTCCCATAATATAAGAACATT 58.605 38.462 0.00 0.00 0.00 2.71
6299 8715 7.883311 CCTCCGTCCCATAATATAAGAACATTT 59.117 37.037 0.00 0.00 0.00 2.32
6300 8716 9.284968 CTCCGTCCCATAATATAAGAACATTTT 57.715 33.333 0.00 0.00 0.00 1.82
6301 8717 9.635404 TCCGTCCCATAATATAAGAACATTTTT 57.365 29.630 0.00 0.00 0.00 1.94
6302 8718 9.677567 CCGTCCCATAATATAAGAACATTTTTG 57.322 33.333 0.00 0.00 0.00 2.44
6315 8731 8.732746 AAGAACATTTTTGACACTACACTAGT 57.267 30.769 0.00 0.00 40.28 2.57
6316 8732 9.826574 AAGAACATTTTTGACACTACACTAGTA 57.173 29.630 0.00 0.00 37.23 1.82
6317 8733 9.998106 AGAACATTTTTGACACTACACTAGTAT 57.002 29.630 0.00 0.00 37.23 2.12
6344 8760 8.446599 AAAAACACTCTTATATTATGGGACGG 57.553 34.615 0.00 0.00 0.00 4.79
6345 8761 6.989155 AACACTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
6346 8762 6.591750 ACACTCTTATATTATGGGACGGAG 57.408 41.667 0.00 0.00 0.00 4.63
6347 8763 5.480772 ACACTCTTATATTATGGGACGGAGG 59.519 44.000 0.00 0.00 0.00 4.30
6348 8764 5.024118 ACTCTTATATTATGGGACGGAGGG 58.976 45.833 0.00 0.00 0.00 4.30
6349 8765 5.222484 ACTCTTATATTATGGGACGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
6350 8766 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
6351 8767 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
6352 8768 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
6353 8769 3.562108 ATTATGGGACGGAGGGAGTAT 57.438 47.619 0.00 0.00 0.00 2.12
6354 8770 2.304221 TATGGGACGGAGGGAGTATG 57.696 55.000 0.00 0.00 0.00 2.39
6355 8771 0.264955 ATGGGACGGAGGGAGTATGT 59.735 55.000 0.00 0.00 0.00 2.29
6356 8772 0.928505 TGGGACGGAGGGAGTATGTA 59.071 55.000 0.00 0.00 0.00 2.29
6357 8773 1.502039 TGGGACGGAGGGAGTATGTAT 59.498 52.381 0.00 0.00 0.00 2.29
6358 8774 1.893801 GGGACGGAGGGAGTATGTATG 59.106 57.143 0.00 0.00 0.00 2.39
6359 8775 2.595238 GGACGGAGGGAGTATGTATGT 58.405 52.381 0.00 0.00 0.00 2.29
6360 8776 3.499202 GGGACGGAGGGAGTATGTATGTA 60.499 52.174 0.00 0.00 0.00 2.29
6361 8777 3.505293 GGACGGAGGGAGTATGTATGTAC 59.495 52.174 0.00 0.00 0.00 2.90
6362 8778 4.139786 GACGGAGGGAGTATGTATGTACA 58.860 47.826 0.00 0.00 40.98 2.90
6363 8779 4.142790 ACGGAGGGAGTATGTATGTACAG 58.857 47.826 0.33 0.00 39.92 2.74
6396 8814 6.781138 ACATTATACACACATGGCGTAAAAG 58.219 36.000 0.00 0.00 0.00 2.27
6399 8817 5.950758 ATACACACATGGCGTAAAAGAAA 57.049 34.783 0.00 0.00 0.00 2.52
6461 8879 6.590234 TCTGCTCTGTTCTGTCTGTAATTA 57.410 37.500 0.00 0.00 0.00 1.40
6553 8971 5.029650 CACTATGCGTGTTCTGCTAAAAA 57.970 39.130 0.00 0.00 38.84 1.94
6579 8997 1.077357 AATTACGGCGCCCAATGGA 60.077 52.632 23.46 0.00 0.00 3.41
6645 9065 1.066908 CAACAAATCTGCCACAACCGT 59.933 47.619 0.00 0.00 0.00 4.83
6651 9071 2.589442 TGCCACAACCGTTCGACC 60.589 61.111 0.00 0.00 0.00 4.79
6663 9083 3.070878 ACCGTTCGACCTTTTTACCCTAA 59.929 43.478 0.00 0.00 0.00 2.69
6685 9105 4.072088 CGCGTTGTCGGCAGTTCC 62.072 66.667 0.00 0.00 37.56 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.845781 TCTGTTGGAGTTGCTCTCTTT 57.154 42.857 8.78 0.00 42.40 2.52
113 1979 3.691342 CCTCCACCTTCGTCGCCA 61.691 66.667 0.00 0.00 0.00 5.69
118 1984 0.826672 AGTCGTTCCTCCACCTTCGT 60.827 55.000 0.00 0.00 0.00 3.85
135 2001 2.600729 CCTCCAGCAGCCAAGGAGT 61.601 63.158 19.49 0.00 45.92 3.85
283 2150 0.674581 TCCTACGAAGGCGACGAAGA 60.675 55.000 12.47 4.25 43.31 2.87
341 2232 4.740822 GTCCATGCCACCGCCCTT 62.741 66.667 0.00 0.00 0.00 3.95
466 2416 1.451567 GTTCCTTAGCCTTCCCGCC 60.452 63.158 0.00 0.00 0.00 6.13
477 2427 0.035739 GACCAACCGCCAGTTCCTTA 59.964 55.000 0.00 0.00 36.18 2.69
525 2476 7.910162 GTGCAAATTTACATCACGAGATACAAT 59.090 33.333 0.00 0.00 31.88 2.71
551 2503 0.391927 TAGAATTCAACACCCCGCGG 60.392 55.000 21.04 21.04 0.00 6.46
553 2505 1.816074 TGTAGAATTCAACACCCCGC 58.184 50.000 8.44 0.00 0.00 6.13
556 2508 4.965119 GGTGATGTAGAATTCAACACCC 57.035 45.455 19.19 5.18 46.10 4.61
560 2512 4.806247 CCTCTCGGTGATGTAGAATTCAAC 59.194 45.833 8.44 0.00 0.00 3.18
563 2515 3.181475 TGCCTCTCGGTGATGTAGAATTC 60.181 47.826 0.00 0.00 0.00 2.17
575 2528 2.997897 GGACCACTGCCTCTCGGT 60.998 66.667 0.00 0.00 33.70 4.69
579 2532 2.683211 AAAATTGGACCACTGCCTCT 57.317 45.000 0.00 0.00 0.00 3.69
704 2661 8.894731 CCACGTCACTTGCTAGATATATATAGT 58.105 37.037 14.32 0.00 0.00 2.12
705 2662 8.894731 ACCACGTCACTTGCTAGATATATATAG 58.105 37.037 9.60 9.60 0.00 1.31
706 2663 8.803397 ACCACGTCACTTGCTAGATATATATA 57.197 34.615 1.04 0.00 0.00 0.86
707 2664 7.704578 ACCACGTCACTTGCTAGATATATAT 57.295 36.000 1.04 0.00 0.00 0.86
708 2665 8.674607 CATACCACGTCACTTGCTAGATATATA 58.325 37.037 1.04 0.00 0.00 0.86
709 2666 7.176865 ACATACCACGTCACTTGCTAGATATAT 59.823 37.037 1.04 0.00 0.00 0.86
710 2667 6.489022 ACATACCACGTCACTTGCTAGATATA 59.511 38.462 1.04 0.00 0.00 0.86
711 2668 5.302059 ACATACCACGTCACTTGCTAGATAT 59.698 40.000 1.04 0.00 0.00 1.63
712 2669 4.643334 ACATACCACGTCACTTGCTAGATA 59.357 41.667 1.04 0.00 0.00 1.98
713 2670 3.447586 ACATACCACGTCACTTGCTAGAT 59.552 43.478 1.04 0.00 0.00 1.98
714 2671 2.823747 ACATACCACGTCACTTGCTAGA 59.176 45.455 1.04 0.00 0.00 2.43
715 2672 3.232213 ACATACCACGTCACTTGCTAG 57.768 47.619 0.00 0.00 0.00 3.42
716 2673 3.129813 CCTACATACCACGTCACTTGCTA 59.870 47.826 0.00 0.00 0.00 3.49
717 2674 2.094182 CCTACATACCACGTCACTTGCT 60.094 50.000 0.00 0.00 0.00 3.91
718 2675 2.268298 CCTACATACCACGTCACTTGC 58.732 52.381 0.00 0.00 0.00 4.01
719 2676 2.494471 TCCCTACATACCACGTCACTTG 59.506 50.000 0.00 0.00 0.00 3.16
720 2677 2.811410 TCCCTACATACCACGTCACTT 58.189 47.619 0.00 0.00 0.00 3.16
721 2678 2.494870 GTTCCCTACATACCACGTCACT 59.505 50.000 0.00 0.00 0.00 3.41
722 2679 2.494870 AGTTCCCTACATACCACGTCAC 59.505 50.000 0.00 0.00 0.00 3.67
723 2680 2.811410 AGTTCCCTACATACCACGTCA 58.189 47.619 0.00 0.00 0.00 4.35
724 2681 6.830873 ATATAGTTCCCTACATACCACGTC 57.169 41.667 0.00 0.00 0.00 4.34
725 2682 7.607615 AAATATAGTTCCCTACATACCACGT 57.392 36.000 0.00 0.00 0.00 4.49
749 2706 9.352784 GCAAACATAGTTCATACAAGCAAATTA 57.647 29.630 0.00 0.00 0.00 1.40
750 2707 7.062138 CGCAAACATAGTTCATACAAGCAAATT 59.938 33.333 0.00 0.00 0.00 1.82
751 2708 6.527722 CGCAAACATAGTTCATACAAGCAAAT 59.472 34.615 0.00 0.00 0.00 2.32
752 2709 5.855925 CGCAAACATAGTTCATACAAGCAAA 59.144 36.000 0.00 0.00 0.00 3.68
753 2710 5.389778 CGCAAACATAGTTCATACAAGCAA 58.610 37.500 0.00 0.00 0.00 3.91
754 2711 4.671508 GCGCAAACATAGTTCATACAAGCA 60.672 41.667 0.30 0.00 0.00 3.91
755 2712 3.786048 GCGCAAACATAGTTCATACAAGC 59.214 43.478 0.30 0.00 0.00 4.01
756 2713 4.968626 TGCGCAAACATAGTTCATACAAG 58.031 39.130 8.16 0.00 0.00 3.16
757 2714 5.049060 AGTTGCGCAAACATAGTTCATACAA 60.049 36.000 26.87 0.00 41.61 2.41
758 2715 4.454161 AGTTGCGCAAACATAGTTCATACA 59.546 37.500 26.87 0.00 41.61 2.29
759 2716 4.969816 AGTTGCGCAAACATAGTTCATAC 58.030 39.130 26.87 8.26 41.61 2.39
760 2717 4.935205 AGAGTTGCGCAAACATAGTTCATA 59.065 37.500 26.87 0.00 41.61 2.15
761 2718 3.753272 AGAGTTGCGCAAACATAGTTCAT 59.247 39.130 26.87 0.00 41.61 2.57
762 2719 3.058983 CAGAGTTGCGCAAACATAGTTCA 60.059 43.478 26.87 0.00 41.61 3.18
763 2720 3.186409 TCAGAGTTGCGCAAACATAGTTC 59.814 43.478 26.87 9.84 41.61 3.01
764 2721 3.138304 TCAGAGTTGCGCAAACATAGTT 58.862 40.909 26.87 4.44 41.61 2.24
765 2722 2.766313 TCAGAGTTGCGCAAACATAGT 58.234 42.857 26.87 4.98 41.61 2.12
766 2723 3.371898 TCATCAGAGTTGCGCAAACATAG 59.628 43.478 26.87 13.92 41.61 2.23
767 2724 3.333804 TCATCAGAGTTGCGCAAACATA 58.666 40.909 26.87 13.61 41.61 2.29
768 2725 2.153645 TCATCAGAGTTGCGCAAACAT 58.846 42.857 26.87 14.16 41.61 2.71
769 2726 1.592064 TCATCAGAGTTGCGCAAACA 58.408 45.000 26.87 7.30 41.61 2.83
770 2727 2.095567 ACATCATCAGAGTTGCGCAAAC 60.096 45.455 26.87 21.05 39.24 2.93
771 2728 2.153645 ACATCATCAGAGTTGCGCAAA 58.846 42.857 26.87 9.51 0.00 3.68
772 2729 1.812235 ACATCATCAGAGTTGCGCAA 58.188 45.000 21.02 21.02 0.00 4.85
773 2730 1.812235 AACATCATCAGAGTTGCGCA 58.188 45.000 5.66 5.66 0.00 6.09
774 2731 2.907910 AAACATCATCAGAGTTGCGC 57.092 45.000 0.00 0.00 0.00 6.09
775 2732 5.281693 TGTTAAACATCATCAGAGTTGCG 57.718 39.130 0.00 0.00 0.00 4.85
839 2796 6.238374 CCGGCTGAATAAATCTCGTAAACATT 60.238 38.462 0.00 0.00 0.00 2.71
887 2844 3.184003 GGTAAACCGCCGTCTCGC 61.184 66.667 0.00 0.00 0.00 5.03
1120 3084 2.032634 TTTGAGCCGAAGCGCGAAT 61.033 52.632 12.10 0.00 46.67 3.34
1312 3276 2.631418 AGTGTTGTCGTCACTATCCG 57.369 50.000 0.00 0.00 43.17 4.18
1362 3340 0.610174 TGCAGATGACCACTCTGTCC 59.390 55.000 2.63 0.00 41.77 4.02
1365 3343 1.002888 AGGTTGCAGATGACCACTCTG 59.997 52.381 7.99 0.00 42.47 3.35
1377 3355 1.290203 CTACGCATACCAGGTTGCAG 58.710 55.000 20.22 16.04 38.80 4.41
1402 3380 6.721571 ATCACTACAAAGGTGTGTTTATCG 57.278 37.500 0.00 0.00 38.82 2.92
1445 3445 4.494091 ACATGTGTTCCTCCAAGATAGG 57.506 45.455 0.00 0.00 35.26 2.57
1601 3606 5.345741 CCCTGAAATCAACAAGCAATAAACG 59.654 40.000 0.00 0.00 0.00 3.60
1627 3632 5.316987 GAAGCTACCAATGCAGGGTATAAT 58.683 41.667 17.60 8.77 40.00 1.28
1629 3634 3.244078 CGAAGCTACCAATGCAGGGTATA 60.244 47.826 17.60 2.35 40.00 1.47
1635 3651 3.063997 CCTTAACGAAGCTACCAATGCAG 59.936 47.826 0.00 0.00 0.00 4.41
1711 3727 7.455641 TTCGATATTTCTTTTAAGTTGGCCA 57.544 32.000 0.00 0.00 0.00 5.36
1743 3759 4.706527 CACTGCTCTCTTTCATCGAAAAC 58.293 43.478 0.00 0.00 30.84 2.43
1776 3792 3.145551 GCCTCCGGTCGGCTCTAA 61.146 66.667 24.09 0.00 44.17 2.10
1785 3801 3.966543 CAAACCCCTGCCTCCGGT 61.967 66.667 0.00 0.00 0.00 5.28
1786 3802 3.646715 TCAAACCCCTGCCTCCGG 61.647 66.667 0.00 0.00 0.00 5.14
1787 3803 2.359975 GTCAAACCCCTGCCTCCG 60.360 66.667 0.00 0.00 0.00 4.63
1814 3834 3.493524 GCTTCTAATCTTTCTCGGGGGAG 60.494 52.174 0.00 0.00 0.00 4.30
1815 3835 2.434702 GCTTCTAATCTTTCTCGGGGGA 59.565 50.000 0.00 0.00 0.00 4.81
1816 3836 2.803492 CGCTTCTAATCTTTCTCGGGGG 60.803 54.545 0.00 0.00 0.00 5.40
1817 3837 2.474816 CGCTTCTAATCTTTCTCGGGG 58.525 52.381 0.00 0.00 0.00 5.73
1818 3838 1.861575 GCGCTTCTAATCTTTCTCGGG 59.138 52.381 0.00 0.00 0.00 5.14
1819 3839 1.861575 GGCGCTTCTAATCTTTCTCGG 59.138 52.381 7.64 0.00 0.00 4.63
1820 3840 1.861575 GGGCGCTTCTAATCTTTCTCG 59.138 52.381 7.64 0.00 0.00 4.04
1825 3845 1.112113 TCTCGGGCGCTTCTAATCTT 58.888 50.000 7.64 0.00 0.00 2.40
1841 3862 2.107141 CGACCCCGGCTCAATCTC 59.893 66.667 0.00 0.00 0.00 2.75
1842 3863 4.162690 GCGACCCCGGCTCAATCT 62.163 66.667 0.00 0.00 36.06 2.40
1844 3865 4.473520 CAGCGACCCCGGCTCAAT 62.474 66.667 0.00 0.00 39.08 2.57
1860 3881 2.668632 CTGGTAAAGCCCTCGCCA 59.331 61.111 0.00 0.00 36.04 5.69
2055 4088 3.116096 TGTAAGGAGAGGCACCTATGT 57.884 47.619 0.00 0.00 36.67 2.29
2068 4101 7.934665 ACACATACAAAACAGTACATGTAAGGA 59.065 33.333 7.25 0.00 43.00 3.36
2069 4102 8.015087 CACACATACAAAACAGTACATGTAAGG 58.985 37.037 7.25 5.34 43.00 2.69
2102 4182 1.884464 CCGCACGACATCCCTGATG 60.884 63.158 2.62 2.62 44.71 3.07
2200 4288 5.417580 GGGGACATTATGTGCAACTTTCTAA 59.582 40.000 17.98 0.00 40.73 2.10
2254 4342 3.754323 CCAAAATGGCAGCATGAACAATT 59.246 39.130 0.00 0.00 39.69 2.32
2257 4345 1.969208 TCCAAAATGGCAGCATGAACA 59.031 42.857 0.00 0.00 37.47 3.18
2263 4351 1.117994 TGTGTTCCAAAATGGCAGCA 58.882 45.000 0.00 0.00 37.47 4.41
2265 4353 2.758009 CCTTGTGTTCCAAAATGGCAG 58.242 47.619 0.00 0.00 37.47 4.85
2266 4354 1.202627 GCCTTGTGTTCCAAAATGGCA 60.203 47.619 0.00 0.00 40.12 4.92
2268 4356 1.270785 GGGCCTTGTGTTCCAAAATGG 60.271 52.381 0.84 0.00 39.43 3.16
2271 4359 0.395862 TCGGGCCTTGTGTTCCAAAA 60.396 50.000 0.84 0.00 31.20 2.44
2325 4496 8.270030 TCAGATCATATCACCAGAACAAGAATT 58.730 33.333 0.00 0.00 0.00 2.17
2370 4541 8.956533 AAATTAAAGCACCACAGTAATGTTTT 57.043 26.923 0.00 0.00 32.49 2.43
2378 4549 4.892934 TCCTTGAAATTAAAGCACCACAGT 59.107 37.500 0.00 0.00 0.00 3.55
2391 4562 6.944862 ACTTCTTAGCACATCTCCTTGAAATT 59.055 34.615 0.00 0.00 0.00 1.82
2405 4576 6.314896 ACAAGCATTATCTCACTTCTTAGCAC 59.685 38.462 0.00 0.00 0.00 4.40
2406 4577 6.314648 CACAAGCATTATCTCACTTCTTAGCA 59.685 38.462 0.00 0.00 0.00 3.49
2407 4578 6.314896 ACACAAGCATTATCTCACTTCTTAGC 59.685 38.462 0.00 0.00 0.00 3.09
2408 4579 7.547019 TGACACAAGCATTATCTCACTTCTTAG 59.453 37.037 0.00 0.00 0.00 2.18
2505 4687 4.641989 AGACAGGCACAATCCATATTTCAC 59.358 41.667 0.00 0.00 0.00 3.18
2546 4728 6.342111 TCACCATACAAACATATACGAGCAA 58.658 36.000 0.00 0.00 0.00 3.91
2629 4811 2.415512 GCAGAGACCAATTCAACCGTAC 59.584 50.000 0.00 0.00 0.00 3.67
2684 4898 6.978343 TGCTCCATACAACAGTAAATGTAC 57.022 37.500 0.00 0.00 43.00 2.90
2773 4994 1.103398 TCGTAGGCGCCTAGGGTTAC 61.103 60.000 40.78 28.84 38.14 2.50
2783 5004 3.305177 TTTCCCAGGTCGTAGGCGC 62.305 63.158 0.00 0.00 38.14 6.53
2819 5040 2.102420 CCGCTGTATATGACTGGGAACA 59.898 50.000 5.51 0.00 40.95 3.18
2858 5079 3.611766 CGTTCATCTGAGGTCTTTGACGA 60.612 47.826 0.00 0.00 32.65 4.20
2987 5208 1.065998 TCAGGTACCGGTGCCAATAAC 60.066 52.381 38.49 17.93 37.85 1.89
3015 5236 7.697291 GTGAATGTAACGTTCCACAACTAAAAA 59.303 33.333 2.82 0.00 0.00 1.94
3031 5252 6.236017 TGAGATTTCCGTTGTGAATGTAAC 57.764 37.500 0.00 0.00 0.00 2.50
3094 5315 1.152881 AGAGGATCCATTTGCCCGC 60.153 57.895 15.82 0.00 33.66 6.13
3097 5318 3.297134 TTACCAGAGGATCCATTTGCC 57.703 47.619 15.82 0.00 33.66 4.52
3127 5348 6.748333 AAAATGTGTATCAGATGTGTCCTG 57.252 37.500 0.00 0.00 0.00 3.86
3128 5349 7.766278 GTCTAAAATGTGTATCAGATGTGTCCT 59.234 37.037 0.00 0.00 0.00 3.85
3129 5350 7.549134 TGTCTAAAATGTGTATCAGATGTGTCC 59.451 37.037 0.00 0.00 0.00 4.02
3130 5351 8.383619 GTGTCTAAAATGTGTATCAGATGTGTC 58.616 37.037 0.00 0.00 0.00 3.67
3131 5352 7.334421 GGTGTCTAAAATGTGTATCAGATGTGT 59.666 37.037 0.00 0.00 0.00 3.72
3132 5353 7.550551 AGGTGTCTAAAATGTGTATCAGATGTG 59.449 37.037 0.00 0.00 0.00 3.21
3133 5354 7.624549 AGGTGTCTAAAATGTGTATCAGATGT 58.375 34.615 0.00 0.00 0.00 3.06
3134 5355 8.498054 AAGGTGTCTAAAATGTGTATCAGATG 57.502 34.615 0.00 0.00 0.00 2.90
3135 5356 9.520515 AAAAGGTGTCTAAAATGTGTATCAGAT 57.479 29.630 0.00 0.00 0.00 2.90
3136 5357 8.918202 AAAAGGTGTCTAAAATGTGTATCAGA 57.082 30.769 0.00 0.00 0.00 3.27
3188 5420 7.615582 TTCAGAAATGCAGTACTTTATGAGG 57.384 36.000 7.62 0.00 34.97 3.86
3229 5461 0.733729 CTCGAGTCTTAGACCACCCG 59.266 60.000 8.96 8.02 32.18 5.28
3413 5645 1.325355 GACGAGAATCCGGTATCCCA 58.675 55.000 0.00 0.00 0.00 4.37
3422 5654 1.550976 ACCTCAAGTGGACGAGAATCC 59.449 52.381 0.00 0.00 39.45 3.01
3491 5723 9.846248 CCTGTCCAAAGAAAGATTAAATGTAAG 57.154 33.333 0.00 0.00 27.13 2.34
3497 5729 6.071391 GCCATCCTGTCCAAAGAAAGATTAAA 60.071 38.462 0.00 0.00 27.13 1.52
3507 5739 2.620251 TATCGCCATCCTGTCCAAAG 57.380 50.000 0.00 0.00 0.00 2.77
3513 5746 3.071457 TGTTGATGATATCGCCATCCTGT 59.929 43.478 0.00 0.00 39.60 4.00
3573 5806 6.952773 AGTCAGTTCAGGAGATGTATAGAC 57.047 41.667 0.00 0.00 0.00 2.59
3705 5938 3.560068 ACAAGCAAGAAACCACTAGAACG 59.440 43.478 0.00 0.00 0.00 3.95
3864 6098 7.906199 AGATACCAACTATAGCTTCAGAGTT 57.094 36.000 0.00 0.00 32.38 3.01
4056 6355 6.538021 CCTGCCTTCATAGACTAATGCATATC 59.462 42.308 0.00 0.00 0.00 1.63
4161 6461 5.103898 AGAGAGGACAGACATATACCTGTGA 60.104 44.000 12.30 0.00 43.02 3.58
4174 6474 5.105146 GCTTAAAGATGGAAGAGAGGACAGA 60.105 44.000 0.00 0.00 0.00 3.41
4179 6479 5.096443 ACTGCTTAAAGATGGAAGAGAGG 57.904 43.478 0.00 0.00 0.00 3.69
4187 6487 8.839310 AGCTATATACAACTGCTTAAAGATGG 57.161 34.615 0.00 0.00 0.00 3.51
4358 6676 9.325198 GTTGGGAAAAAGAACATTCATAAAACT 57.675 29.630 0.00 0.00 0.00 2.66
4359 6677 8.556194 GGTTGGGAAAAAGAACATTCATAAAAC 58.444 33.333 0.00 0.00 0.00 2.43
4363 6681 6.014669 CCTGGTTGGGAAAAAGAACATTCATA 60.015 38.462 0.00 0.00 0.00 2.15
4364 6682 5.221702 CCTGGTTGGGAAAAAGAACATTCAT 60.222 40.000 0.00 0.00 0.00 2.57
4365 6683 4.100808 CCTGGTTGGGAAAAAGAACATTCA 59.899 41.667 0.00 0.00 0.00 2.57
4512 6830 6.249260 GTCACAGAATCAACATATTGCGAAAC 59.751 38.462 0.00 0.00 35.63 2.78
4535 6853 4.164221 TCTGAAACATAGAATCCCCTGGTC 59.836 45.833 0.00 0.00 0.00 4.02
4578 6896 1.608590 ACCAAACAGCACCGATTTCTG 59.391 47.619 0.00 0.00 0.00 3.02
4645 6971 7.194112 TCCATTCTTATGTCCACTGTAATCA 57.806 36.000 0.00 0.00 0.00 2.57
4739 7065 3.709653 AGAGAAACTGCGGTGGGAATATA 59.290 43.478 0.00 0.00 0.00 0.86
4740 7066 2.505819 AGAGAAACTGCGGTGGGAATAT 59.494 45.455 0.00 0.00 0.00 1.28
4802 7128 4.536489 AGTATGTTTAGGCCCAGTTCTTCT 59.464 41.667 0.00 0.00 0.00 2.85
4803 7129 4.844884 AGTATGTTTAGGCCCAGTTCTTC 58.155 43.478 0.00 0.00 0.00 2.87
4821 7148 4.860022 AGCTAACATGGCAAGGAAAGTAT 58.140 39.130 0.00 0.00 0.00 2.12
4867 7194 8.133024 ACTGCCACAAAATATCCAAATTCTAA 57.867 30.769 0.00 0.00 0.00 2.10
4888 7215 3.181490 TGTGTCACTGTATCGGATACTGC 60.181 47.826 25.72 15.17 37.98 4.40
4915 7242 5.250082 TCAACCAGTACTCAGTCTACCTCTA 59.750 44.000 0.00 0.00 0.00 2.43
5000 7331 4.202121 ACGACGATATCCAGTAAGCACAAT 60.202 41.667 0.00 0.00 0.00 2.71
5091 7422 6.861055 CCACAAATTGTTGAACTACACCATAC 59.139 38.462 0.00 0.00 38.20 2.39
5139 7470 1.376812 CACTGCAGGCTCAGCATGA 60.377 57.895 17.29 0.00 43.36 3.07
5175 7506 4.213694 GCAAATGCAATGGTTTTCATGTCA 59.786 37.500 0.00 0.00 41.59 3.58
5176 7507 4.453136 AGCAAATGCAATGGTTTTCATGTC 59.547 37.500 8.28 0.00 45.16 3.06
5239 7574 4.385825 TGCCTGTAAATTCAAGAGACGTT 58.614 39.130 0.00 0.00 0.00 3.99
5343 7678 6.238484 GCTGATTATTGATACAAGGACACACC 60.238 42.308 0.00 0.00 39.35 4.16
5396 7731 9.787532 TTTATGAAGTAATCAAAGCTAATGTGC 57.212 29.630 0.00 0.00 42.54 4.57
5505 7866 6.923508 CAGGCGAATCTGTTAGTGTTCATATA 59.076 38.462 0.00 0.00 0.00 0.86
5537 7901 0.388520 CGGCTCTGAATCGACACACA 60.389 55.000 0.00 0.00 0.00 3.72
5664 8028 1.274167 AGTATTTCCACGCCGTCTTCA 59.726 47.619 0.00 0.00 0.00 3.02
5688 8052 3.440415 GGCCGGGCTTAACACTGC 61.440 66.667 22.87 0.00 0.00 4.40
5874 8250 4.127171 CTCACCCTATAATCCCAACAACG 58.873 47.826 0.00 0.00 0.00 4.10
5986 8362 2.086869 AGACATGGCTTTCATCAACCG 58.913 47.619 0.00 0.00 32.92 4.44
5989 8365 3.581024 GCAAGACATGGCTTTCATCAA 57.419 42.857 12.33 0.00 32.92 2.57
6033 8411 9.618890 AGTATCAATAAAGCAAAGCAGATCTTA 57.381 29.630 0.00 0.00 33.88 2.10
6065 8444 3.126514 GCATCAGGCTGATAATCAATCGG 59.873 47.826 28.39 14.32 43.01 4.18
6164 8574 2.268076 GCTCAGCCTCCCGCAAAAA 61.268 57.895 0.00 0.00 41.38 1.94
6165 8575 2.672996 GCTCAGCCTCCCGCAAAA 60.673 61.111 0.00 0.00 41.38 2.44
6166 8576 3.612247 GAGCTCAGCCTCCCGCAAA 62.612 63.158 9.40 0.00 41.38 3.68
6271 8687 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
6272 8688 5.247564 TGTTCTTATATTATGGGACGGAGGG 59.752 44.000 0.00 0.00 0.00 4.30
6273 8689 6.354794 TGTTCTTATATTATGGGACGGAGG 57.645 41.667 0.00 0.00 0.00 4.30
6274 8690 8.848474 AAATGTTCTTATATTATGGGACGGAG 57.152 34.615 0.00 0.00 0.00 4.63
6275 8691 9.635404 AAAAATGTTCTTATATTATGGGACGGA 57.365 29.630 0.00 0.00 0.00 4.69
6276 8692 9.677567 CAAAAATGTTCTTATATTATGGGACGG 57.322 33.333 0.00 0.00 0.00 4.79
6289 8705 9.826574 ACTAGTGTAGTGTCAAAAATGTTCTTA 57.173 29.630 0.00 0.00 37.69 2.10
6290 8706 8.732746 ACTAGTGTAGTGTCAAAAATGTTCTT 57.267 30.769 0.00 0.00 37.69 2.52
6291 8707 9.998106 ATACTAGTGTAGTGTCAAAAATGTTCT 57.002 29.630 5.39 0.00 39.81 3.01
6319 8735 8.269317 TCCGTCCCATAATATAAGAGTGTTTTT 58.731 33.333 0.00 0.00 0.00 1.94
6320 8736 7.798071 TCCGTCCCATAATATAAGAGTGTTTT 58.202 34.615 0.00 0.00 0.00 2.43
6321 8737 7.369551 TCCGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
6322 8738 6.014499 CCTCCGTCCCATAATATAAGAGTGTT 60.014 42.308 0.00 0.00 0.00 3.32
6323 8739 5.480772 CCTCCGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
6324 8740 5.105310 CCCTCCGTCCCATAATATAAGAGTG 60.105 48.000 0.00 0.00 0.00 3.51
6325 8741 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
6326 8742 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
6327 8743 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
6328 8744 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
6329 8745 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
6330 8746 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
6331 8747 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
6332 8748 4.202749 ACATACTCCCTCCGTCCCATAATA 60.203 45.833 0.00 0.00 0.00 0.98
6333 8749 3.173965 CATACTCCCTCCGTCCCATAAT 58.826 50.000 0.00 0.00 0.00 1.28
6334 8750 2.090943 ACATACTCCCTCCGTCCCATAA 60.091 50.000 0.00 0.00 0.00 1.90
6335 8751 1.502039 ACATACTCCCTCCGTCCCATA 59.498 52.381 0.00 0.00 0.00 2.74
6336 8752 0.264955 ACATACTCCCTCCGTCCCAT 59.735 55.000 0.00 0.00 0.00 4.00
6337 8753 0.928505 TACATACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
6338 8754 1.893801 CATACATACTCCCTCCGTCCC 59.106 57.143 0.00 0.00 0.00 4.46
6339 8755 2.595238 ACATACATACTCCCTCCGTCC 58.405 52.381 0.00 0.00 0.00 4.79
6340 8756 4.139786 TGTACATACATACTCCCTCCGTC 58.860 47.826 0.00 0.00 0.00 4.79
6341 8757 4.141321 TCTGTACATACATACTCCCTCCGT 60.141 45.833 0.00 0.00 35.36 4.69
6342 8758 4.395625 TCTGTACATACATACTCCCTCCG 58.604 47.826 0.00 0.00 35.36 4.63
6343 8759 6.919775 AATCTGTACATACATACTCCCTCC 57.080 41.667 0.00 0.00 35.36 4.30
6344 8760 7.952671 TGAAATCTGTACATACATACTCCCTC 58.047 38.462 0.00 0.00 35.36 4.30
6345 8761 7.914427 TGAAATCTGTACATACATACTCCCT 57.086 36.000 0.00 0.00 35.36 4.20
6363 8779 9.398170 GCCATGTGTGTATAATGTTATGAAATC 57.602 33.333 0.00 0.00 0.00 2.17
6382 8798 4.481930 TGTCTTTCTTTTACGCCATGTG 57.518 40.909 0.00 0.00 0.00 3.21
6385 8801 7.826690 ACATATTTGTCTTTCTTTTACGCCAT 58.173 30.769 0.00 0.00 0.00 4.40
6461 8879 9.194972 TGATTCTAATCACAGACAGAATAGAGT 57.805 33.333 1.23 0.00 40.32 3.24
6533 8951 5.512788 CCAATTTTTAGCAGAACACGCATAG 59.487 40.000 0.00 0.00 0.00 2.23
6553 8971 1.021968 GGCGCCGTAATTCTTCCAAT 58.978 50.000 12.58 0.00 0.00 3.16
6579 8997 1.078143 GGAGCTGCGTGGAGGATTT 60.078 57.895 0.00 0.00 0.00 2.17
6591 9009 2.733301 AGCGGATCGATGGAGCTG 59.267 61.111 15.33 0.00 38.00 4.24
6645 9065 4.980339 AGGTTAGGGTAAAAAGGTCGAA 57.020 40.909 0.00 0.00 0.00 3.71
6651 9071 3.588955 ACGCGTAGGTTAGGGTAAAAAG 58.411 45.455 11.67 0.00 0.00 2.27
6663 9083 3.909258 CTGCCGACAACGCGTAGGT 62.909 63.158 14.46 14.97 42.16 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.