Multiple sequence alignment - TraesCS6D01G301200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G301200 chr6D 100.000 6342 0 0 1 6342 411195498 411189157 0.000000e+00 11712.0
1 TraesCS6D01G301200 chr6D 91.045 134 9 1 1823 1956 411193540 411193410 1.820000e-40 178.0
2 TraesCS6D01G301200 chr6D 91.045 134 9 1 1959 2089 411193676 411193543 1.820000e-40 178.0
3 TraesCS6D01G301200 chr6D 86.726 113 12 1 6137 6246 275919207 275919095 8.630000e-24 122.0
4 TraesCS6D01G301200 chr6B 91.963 3098 142 39 1159 4181 617983954 617980889 0.000000e+00 4242.0
5 TraesCS6D01G301200 chr6B 88.817 465 34 8 5041 5494 617980035 617979578 7.180000e-154 555.0
6 TraesCS6D01G301200 chr6B 89.974 379 30 4 4374 4749 617980729 617980356 3.440000e-132 483.0
7 TraesCS6D01G301200 chr6B 93.878 196 5 4 902 1097 617984271 617984083 8.040000e-74 289.0
8 TraesCS6D01G301200 chr6B 93.011 186 11 2 5500 5684 617979530 617979346 2.910000e-68 270.0
9 TraesCS6D01G301200 chr6B 90.055 181 14 2 4178 4354 141042409 141042589 1.380000e-56 231.0
10 TraesCS6D01G301200 chr6B 88.764 178 15 5 4180 4357 720504261 720504089 4.980000e-51 213.0
11 TraesCS6D01G301200 chr6B 92.593 135 7 1 1958 2089 617983290 617983156 2.330000e-44 191.0
12 TraesCS6D01G301200 chr6B 85.315 143 9 3 1823 1956 617983153 617983014 3.080000e-28 137.0
13 TraesCS6D01G301200 chr6A 93.938 2095 66 21 2138 4181 555934078 555931994 0.000000e+00 3109.0
14 TraesCS6D01G301200 chr6A 96.051 1494 36 9 4353 5833 555931995 555930512 0.000000e+00 2410.0
15 TraesCS6D01G301200 chr6A 93.349 872 38 8 1098 1956 555934951 555934087 0.000000e+00 1271.0
16 TraesCS6D01G301200 chr6A 95.238 147 7 0 951 1097 555935133 555934987 3.820000e-57 233.0
17 TraesCS6D01G301200 chr6A 95.105 143 5 2 1959 2099 555934217 555934075 2.300000e-54 224.0
18 TraesCS6D01G301200 chr6A 96.000 50 1 1 5934 5983 555928950 555928902 5.270000e-11 80.5
19 TraesCS6D01G301200 chr5B 86.926 2157 183 55 2104 4206 379001056 378998945 0.000000e+00 2329.0
20 TraesCS6D01G301200 chr5B 79.620 790 97 37 1213 1951 379001951 379001175 5.670000e-140 508.0
21 TraesCS6D01G301200 chr5B 91.507 365 28 3 4389 4750 378998695 378998331 3.410000e-137 499.0
22 TraesCS6D01G301200 chr5B 84.783 276 35 7 5040 5312 378998232 378997961 2.910000e-68 270.0
23 TraesCS6D01G301200 chr5B 93.038 158 9 2 4217 4374 479312812 479312967 4.950000e-56 230.0
24 TraesCS6D01G301200 chr5B 77.522 347 38 21 5350 5669 378997960 378997627 8.450000e-39 172.0
25 TraesCS6D01G301200 chr5D 87.000 2123 189 42 2104 4186 326459981 326457906 0.000000e+00 2311.0
26 TraesCS6D01G301200 chr5D 79.772 791 92 39 1213 1950 326460874 326460099 4.390000e-141 512.0
27 TraesCS6D01G301200 chr5D 86.830 448 46 7 4314 4749 326457561 326457115 7.390000e-134 488.0
28 TraesCS6D01G301200 chr5D 77.151 674 92 32 5040 5684 326457014 326456374 1.020000e-87 335.0
29 TraesCS6D01G301200 chr5D 88.764 267 19 6 5990 6247 106623440 106623704 3.690000e-82 316.0
30 TraesCS6D01G301200 chr5D 85.425 247 24 10 6007 6247 526686379 526686139 4.910000e-61 246.0
31 TraesCS6D01G301200 chr5D 94.175 103 6 0 6240 6342 479526093 479525991 2.370000e-34 158.0
32 TraesCS6D01G301200 chr5A 86.864 2124 189 42 2104 4186 429982211 429984285 0.000000e+00 2294.0
33 TraesCS6D01G301200 chr5A 94.357 886 50 0 1 886 229489373 229490258 0.000000e+00 1360.0
34 TraesCS6D01G301200 chr5A 79.471 794 95 38 1213 1952 429981321 429982100 9.490000e-138 501.0
35 TraesCS6D01G301200 chr5A 87.054 448 43 8 4314 4749 429984630 429985074 5.710000e-135 492.0
36 TraesCS6D01G301200 chr5A 85.348 273 34 6 5040 5309 429985177 429985446 1.740000e-70 278.0
37 TraesCS6D01G301200 chr5A 94.118 102 6 0 6241 6342 286003542 286003643 8.510000e-34 156.0
38 TraesCS6D01G301200 chr3A 94.892 881 43 2 1 881 599993403 599992525 0.000000e+00 1376.0
39 TraesCS6D01G301200 chr3A 85.614 285 19 9 5980 6247 44228939 44229218 4.840000e-71 279.0
40 TraesCS6D01G301200 chr3A 84.375 256 26 10 5994 6247 732877155 732876912 8.220000e-59 239.0
41 TraesCS6D01G301200 chr3A 92.025 163 10 3 4217 4378 671642880 671642720 6.400000e-55 226.0
42 TraesCS6D01G301200 chr3A 93.269 104 7 0 6237 6340 43645105 43645208 3.060000e-33 154.0
43 TraesCS6D01G301200 chr3D 94.582 886 48 0 1 886 58989998 58989113 0.000000e+00 1371.0
44 TraesCS6D01G301200 chr3D 94.463 885 49 0 2 886 58897301 58896417 0.000000e+00 1363.0
45 TraesCS6D01G301200 chr3D 94.357 886 50 0 1 886 58842374 58841489 0.000000e+00 1360.0
46 TraesCS6D01G301200 chr4B 93.096 898 57 5 1 895 341929542 341928647 0.000000e+00 1310.0
47 TraesCS6D01G301200 chr4B 91.676 889 66 4 1 886 35232469 35233352 0.000000e+00 1225.0
48 TraesCS6D01G301200 chr4B 90.260 883 85 1 1 882 481805558 481806440 0.000000e+00 1153.0
49 TraesCS6D01G301200 chr3B 89.853 887 82 4 1 886 672096185 672097064 0.000000e+00 1133.0
50 TraesCS6D01G301200 chr7D 87.956 274 15 12 5980 6247 427904067 427903806 2.220000e-79 307.0
51 TraesCS6D01G301200 chr7D 87.189 281 18 5 5980 6247 556285208 556284933 2.870000e-78 303.0
52 TraesCS6D01G301200 chr7D 95.000 100 5 0 6243 6342 80720088 80719989 2.370000e-34 158.0
53 TraesCS6D01G301200 chr7D 93.396 106 7 0 6237 6342 480998226 480998331 2.370000e-34 158.0
54 TraesCS6D01G301200 chr4D 86.989 269 15 8 5988 6247 351675748 351675491 1.040000e-72 285.0
55 TraesCS6D01G301200 chr4D 94.175 103 6 0 6240 6342 222965256 222965154 2.370000e-34 158.0
56 TraesCS6D01G301200 chr4D 94.175 103 6 0 6240 6342 351675465 351675363 2.370000e-34 158.0
57 TraesCS6D01G301200 chr4D 93.750 48 3 0 4172 4219 403247074 403247121 8.820000e-09 73.1
58 TraesCS6D01G301200 chr7B 84.775 289 20 8 5980 6247 720341995 720342280 1.050000e-67 268.0
59 TraesCS6D01G301200 chr7B 94.340 106 6 0 6237 6342 720342303 720342408 5.090000e-36 163.0
60 TraesCS6D01G301200 chrUn 84.727 275 22 16 5988 6246 333863246 333862976 2.270000e-64 257.0
61 TraesCS6D01G301200 chr1D 84.452 283 13 8 5980 6247 486887609 486887875 3.800000e-62 250.0
62 TraesCS6D01G301200 chr1D 95.238 147 5 2 4217 4362 178466333 178466478 1.380000e-56 231.0
63 TraesCS6D01G301200 chr1D 94.118 102 6 0 6241 6342 486887905 486888006 8.510000e-34 156.0
64 TraesCS6D01G301200 chr2D 91.477 176 14 1 4180 4354 257390640 257390815 2.280000e-59 241.0
65 TraesCS6D01G301200 chr2D 94.595 148 8 0 4217 4364 161906879 161907026 4.950000e-56 230.0
66 TraesCS6D01G301200 chr2D 97.561 41 0 1 4180 4219 251432516 251432476 1.140000e-07 69.4
67 TraesCS6D01G301200 chr2D 87.500 56 5 2 4166 4219 292991578 292991633 5.310000e-06 63.9
68 TraesCS6D01G301200 chr1A 93.548 155 9 1 4217 4370 84438449 84438295 4.950000e-56 230.0
69 TraesCS6D01G301200 chr1A 89.011 182 16 2 4174 4354 249051852 249052030 8.280000e-54 222.0
70 TraesCS6D01G301200 chr2B 87.978 183 11 2 4173 4354 184952927 184952755 8.330000e-49 206.0
71 TraesCS6D01G301200 chr4A 79.643 280 32 11 5980 6241 698356555 698356827 1.820000e-40 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G301200 chr6D 411189157 411195498 6341 True 4022.666667 11712 94.030000 1 6342 3 chr6D.!!$R2 6341
1 TraesCS6D01G301200 chr6B 617979346 617984271 4925 True 881.000000 4242 90.793000 902 5684 7 chr6B.!!$R2 4782
2 TraesCS6D01G301200 chr6A 555928902 555935133 6231 True 1221.250000 3109 94.946833 951 5983 6 chr6A.!!$R1 5032
3 TraesCS6D01G301200 chr5B 378997627 379001951 4324 True 755.600000 2329 84.071600 1213 5669 5 chr5B.!!$R1 4456
4 TraesCS6D01G301200 chr5D 326456374 326460874 4500 True 911.500000 2311 82.688250 1213 5684 4 chr5D.!!$R3 4471
5 TraesCS6D01G301200 chr5A 229489373 229490258 885 False 1360.000000 1360 94.357000 1 886 1 chr5A.!!$F1 885
6 TraesCS6D01G301200 chr5A 429981321 429985446 4125 False 891.250000 2294 84.684250 1213 5309 4 chr5A.!!$F3 4096
7 TraesCS6D01G301200 chr3A 599992525 599993403 878 True 1376.000000 1376 94.892000 1 881 1 chr3A.!!$R1 880
8 TraesCS6D01G301200 chr3D 58989113 58989998 885 True 1371.000000 1371 94.582000 1 886 1 chr3D.!!$R3 885
9 TraesCS6D01G301200 chr3D 58896417 58897301 884 True 1363.000000 1363 94.463000 2 886 1 chr3D.!!$R2 884
10 TraesCS6D01G301200 chr3D 58841489 58842374 885 True 1360.000000 1360 94.357000 1 886 1 chr3D.!!$R1 885
11 TraesCS6D01G301200 chr4B 341928647 341929542 895 True 1310.000000 1310 93.096000 1 895 1 chr4B.!!$R1 894
12 TraesCS6D01G301200 chr4B 35232469 35233352 883 False 1225.000000 1225 91.676000 1 886 1 chr4B.!!$F1 885
13 TraesCS6D01G301200 chr4B 481805558 481806440 882 False 1153.000000 1153 90.260000 1 882 1 chr4B.!!$F2 881
14 TraesCS6D01G301200 chr3B 672096185 672097064 879 False 1133.000000 1133 89.853000 1 886 1 chr3B.!!$F1 885

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
690 697 0.976641 TGCTGTTCTTCGGAGGTGAT 59.023 50.000 0.00 0.0 0.00 3.06 F
1403 1492 0.538584 GATAGTTTCGGTTCCGGGGT 59.461 55.000 11.37 0.0 0.00 4.95 F
1634 1765 0.807496 GCCTGGCATGTTCTCAACTC 59.193 55.000 15.17 0.0 0.00 3.01 F
1829 1971 1.142262 TCGAGGATACCACGGATGAGA 59.858 52.381 7.63 0.0 37.45 3.27 F
1868 2010 1.636003 GAGTGGAGAATGGGGAGGTTT 59.364 52.381 0.00 0.0 0.00 3.27 F
3567 3918 3.610349 GCTGCAGTTTAGCCAAAGAGTTC 60.610 47.826 16.64 0.0 35.15 3.01 F
4111 4469 2.151202 CTATGGTTTGACGCTTGGTGT 58.849 47.619 0.00 0.0 0.00 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1994 2136 0.261696 AAGCAACACCAACCTTCCCT 59.738 50.000 0.0 0.0 0.00 4.20 R
2374 2644 1.076332 GTGTCACATCGGTAGCCAAC 58.924 55.000 0.0 0.0 0.00 3.77 R
2721 3029 2.450476 CAATAGGTTGCCCTTGAGCTT 58.550 47.619 0.0 0.0 42.66 3.74 R
3811 4166 2.612212 TGTCAAGAAAAACAGACCTCGC 59.388 45.455 0.0 0.0 0.00 5.03 R
3812 4167 4.875544 TTGTCAAGAAAAACAGACCTCG 57.124 40.909 0.0 0.0 0.00 4.63 R
4766 5526 0.798776 GACTGATGGAAACTGTGCCG 59.201 55.000 0.0 0.0 0.00 5.69 R
5932 8558 0.034059 AGAAACAGGGCTCACGTCAG 59.966 55.000 0.0 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 88 2.048597 CTTGCACGGCGTGGTAGA 60.049 61.111 37.33 10.78 33.64 2.59
227 230 1.456287 GACAGTGCCTCCCCAAACT 59.544 57.895 0.00 0.00 0.00 2.66
230 233 1.497286 ACAGTGCCTCCCCAAACTTTA 59.503 47.619 0.00 0.00 0.00 1.85
280 283 1.064825 AAATCCTGTCCGGTTCTGGT 58.935 50.000 18.38 8.66 0.00 4.00
584 588 1.611673 CCAAGACGGTGCCTTTCTCAT 60.612 52.381 0.00 0.00 0.00 2.90
585 589 2.354704 CCAAGACGGTGCCTTTCTCATA 60.355 50.000 0.00 0.00 0.00 2.15
670 677 1.893919 GAGGGAAGCTTGGCGAGAGT 61.894 60.000 2.10 0.00 0.00 3.24
690 697 0.976641 TGCTGTTCTTCGGAGGTGAT 59.023 50.000 0.00 0.00 0.00 3.06
721 728 3.039588 GACGCGGCGAGGTTTTCA 61.040 61.111 30.94 0.00 0.00 2.69
739 746 3.945640 TCAAATTAGGGTAGGGCCTTC 57.054 47.619 13.45 6.46 37.43 3.46
745 752 2.669240 GGTAGGGCCTTCTGCGTT 59.331 61.111 13.45 0.00 42.61 4.84
766 773 3.783191 TGTAGTTGTGTTGTCGTTGCTA 58.217 40.909 0.00 0.00 0.00 3.49
776 783 1.890489 TGTCGTTGCTAGCTGTCCTTA 59.110 47.619 17.23 0.00 0.00 2.69
857 864 7.432252 CGTTTTGTACTTGCAATTCTCTTCTTT 59.568 33.333 0.00 0.00 0.00 2.52
882 889 4.370364 AAAGCTATGGTACGCAATTTGG 57.630 40.909 0.00 0.00 0.00 3.28
886 893 3.818773 GCTATGGTACGCAATTTGGGTAT 59.181 43.478 23.82 14.66 45.41 2.73
887 894 4.277423 GCTATGGTACGCAATTTGGGTATT 59.723 41.667 23.82 15.99 45.41 1.89
888 895 5.470777 GCTATGGTACGCAATTTGGGTATTA 59.529 40.000 23.82 17.40 45.41 0.98
889 896 6.016943 GCTATGGTACGCAATTTGGGTATTAA 60.017 38.462 23.82 15.10 45.41 1.40
890 897 6.777213 ATGGTACGCAATTTGGGTATTAAA 57.223 33.333 23.82 13.21 45.41 1.52
891 898 6.585695 TGGTACGCAATTTGGGTATTAAAA 57.414 33.333 23.82 5.25 45.41 1.52
892 899 6.989659 TGGTACGCAATTTGGGTATTAAAAA 58.010 32.000 23.82 4.62 45.41 1.94
924 931 2.283173 TGGCGAGACCAGAGCAGA 60.283 61.111 0.00 0.00 46.36 4.26
932 939 3.775654 CCAGAGCAGACCCGACCC 61.776 72.222 0.00 0.00 0.00 4.46
933 940 4.135153 CAGAGCAGACCCGACCCG 62.135 72.222 0.00 0.00 0.00 5.28
940 947 2.357881 GACCCGACCCGACCAAAC 60.358 66.667 0.00 0.00 0.00 2.93
941 948 3.889134 GACCCGACCCGACCAAACC 62.889 68.421 0.00 0.00 0.00 3.27
942 949 4.710167 CCCGACCCGACCAAACCC 62.710 72.222 0.00 0.00 0.00 4.11
943 950 3.943691 CCGACCCGACCAAACCCA 61.944 66.667 0.00 0.00 0.00 4.51
944 951 2.111460 CGACCCGACCAAACCCAA 59.889 61.111 0.00 0.00 0.00 4.12
945 952 1.526455 CGACCCGACCAAACCCAAA 60.526 57.895 0.00 0.00 0.00 3.28
946 953 1.788067 CGACCCGACCAAACCCAAAC 61.788 60.000 0.00 0.00 0.00 2.93
1100 1107 2.912542 CGCCCTCGCCTCCTATCA 60.913 66.667 0.00 0.00 0.00 2.15
1101 1108 2.498941 CGCCCTCGCCTCCTATCAA 61.499 63.158 0.00 0.00 0.00 2.57
1103 1110 1.115930 GCCCTCGCCTCCTATCAAGA 61.116 60.000 0.00 0.00 0.00 3.02
1104 1111 0.965439 CCCTCGCCTCCTATCAAGAG 59.035 60.000 0.00 0.00 0.00 2.85
1105 1112 1.479573 CCCTCGCCTCCTATCAAGAGA 60.480 57.143 0.00 0.00 32.86 3.10
1176 1255 1.375523 CCTTCCCCGAGTTGTTCCG 60.376 63.158 0.00 0.00 0.00 4.30
1403 1492 0.538584 GATAGTTTCGGTTCCGGGGT 59.461 55.000 11.37 0.00 0.00 4.95
1430 1522 1.296755 CGCTCAGAGTGCTGCATTGT 61.297 55.000 5.27 0.00 42.01 2.71
1506 1598 8.449397 CAAGAACAAGTGGATTAGATTTGAGAG 58.551 37.037 0.00 0.00 0.00 3.20
1507 1599 7.911651 AGAACAAGTGGATTAGATTTGAGAGA 58.088 34.615 0.00 0.00 0.00 3.10
1510 1602 5.885449 AGTGGATTAGATTTGAGAGAGGG 57.115 43.478 0.00 0.00 0.00 4.30
1634 1765 0.807496 GCCTGGCATGTTCTCAACTC 59.193 55.000 15.17 0.00 0.00 3.01
1657 1788 2.684881 CCAATGTCTGGGTTGTAGATGC 59.315 50.000 0.00 0.00 42.17 3.91
1715 1846 9.669353 CTATTTCAATGTGCAATAGTTACATCC 57.331 33.333 0.00 0.00 34.18 3.51
1794 1936 6.389091 TGGCATGACATTGTGTAATTTCTTC 58.611 36.000 0.00 0.00 0.00 2.87
1810 1952 9.756461 GTAATTTCTTCTCGTTTTATTCAGGTC 57.244 33.333 0.00 0.00 0.00 3.85
1821 1963 4.931661 TTATTCAGGTCGAGGATACCAC 57.068 45.455 0.00 0.00 39.64 4.16
1829 1971 1.142262 TCGAGGATACCACGGATGAGA 59.858 52.381 7.63 0.00 37.45 3.27
1868 2010 1.636003 GAGTGGAGAATGGGGAGGTTT 59.364 52.381 0.00 0.00 0.00 3.27
1887 2029 4.570369 GGTTTGTGTTGCTTATTGCTTGTT 59.430 37.500 0.00 0.00 43.37 2.83
1899 2041 6.542370 GCTTATTGCTTGTTGTTCCTCCTATA 59.458 38.462 0.00 0.00 38.95 1.31
1909 2051 8.815565 TGTTGTTCCTCCTATATTTTGCATTA 57.184 30.769 0.00 0.00 0.00 1.90
1913 2055 8.004215 TGTTCCTCCTATATTTTGCATTACCAT 58.996 33.333 0.00 0.00 0.00 3.55
1919 2061 8.859090 TCCTATATTTTGCATTACCATTTGGAG 58.141 33.333 3.01 0.00 38.94 3.86
1994 2136 4.718961 AGCAGCTTAAAAGACTGGAGAAA 58.281 39.130 12.75 0.00 33.61 2.52
1998 2149 4.351111 AGCTTAAAAGACTGGAGAAAGGGA 59.649 41.667 0.00 0.00 0.00 4.20
2321 2591 4.104776 TGCTTCGCTGTTTTTCAGAAAAG 58.895 39.130 8.34 0.00 46.27 2.27
2322 2592 4.105486 GCTTCGCTGTTTTTCAGAAAAGT 58.895 39.130 8.34 0.00 46.27 2.66
2374 2644 8.531530 CCTGAATTTGTTGTAAAGAGAAAAACG 58.468 33.333 0.00 0.00 0.00 3.60
2483 2776 9.407380 ACTATAATGTACCATGAGCAATTGAAA 57.593 29.630 10.34 0.00 0.00 2.69
2508 2801 5.896678 ACTACATAGAAGACTCCTCATTGCT 59.103 40.000 0.00 0.00 0.00 3.91
2521 2814 6.205658 ACTCCTCATTGCTTTTTCTCTTGTAC 59.794 38.462 0.00 0.00 0.00 2.90
2526 2819 8.621532 TCATTGCTTTTTCTCTTGTACATAGT 57.378 30.769 0.00 0.00 0.00 2.12
2599 2904 8.735315 TCATGTTAAAATCGGCTTTTAAGATCA 58.265 29.630 13.32 8.05 44.03 2.92
2607 2912 9.921637 AAATCGGCTTTTAAGATCAATTTTGTA 57.078 25.926 0.00 0.00 0.00 2.41
2731 3039 9.566432 AAAGATTATAACTATGAAGCTCAAGGG 57.434 33.333 0.00 0.00 0.00 3.95
3040 3349 8.947115 GTTTGTAGAGAGCAGGTAAAATACAAT 58.053 33.333 0.00 0.00 33.38 2.71
3190 3523 6.420903 CACCGTGTTATGAGTATATGACAAGG 59.579 42.308 11.82 11.82 45.20 3.61
3380 3730 7.857456 ACATTTTTCCTCAAAGGTAAAGGTTT 58.143 30.769 7.38 0.00 36.28 3.27
3381 3731 7.768582 ACATTTTTCCTCAAAGGTAAAGGTTTG 59.231 33.333 7.38 0.00 36.28 2.93
3382 3732 6.860790 TTTTCCTCAAAGGTAAAGGTTTGT 57.139 33.333 0.00 0.00 36.53 2.83
3383 3733 7.957992 TTTTCCTCAAAGGTAAAGGTTTGTA 57.042 32.000 0.00 0.00 36.53 2.41
3567 3918 3.610349 GCTGCAGTTTAGCCAAAGAGTTC 60.610 47.826 16.64 0.00 35.15 3.01
3811 4166 4.811555 TTCTGTTCTGTTGAATGGTTCG 57.188 40.909 0.00 0.00 34.40 3.95
3812 4167 2.548057 TCTGTTCTGTTGAATGGTTCGC 59.452 45.455 0.00 0.00 34.40 4.70
3866 4222 3.565307 TGTTCAGGAACATTTTGCTCCT 58.435 40.909 10.63 0.00 43.31 3.69
3867 4223 4.724399 TGTTCAGGAACATTTTGCTCCTA 58.276 39.130 10.63 0.00 40.76 2.94
3868 4224 5.136828 TGTTCAGGAACATTTTGCTCCTAA 58.863 37.500 10.63 0.00 40.76 2.69
4059 4417 5.768662 ACCCTTTTAACAAGGAAGCTACTTC 59.231 40.000 14.42 0.00 39.81 3.01
4111 4469 2.151202 CTATGGTTTGACGCTTGGTGT 58.849 47.619 0.00 0.00 0.00 4.16
4181 4539 9.869757 AAACCAAAGCCATCAACTTTATTATAC 57.130 29.630 0.00 0.00 35.62 1.47
4182 4540 8.823220 ACCAAAGCCATCAACTTTATTATACT 57.177 30.769 0.00 0.00 35.62 2.12
4183 4541 8.903820 ACCAAAGCCATCAACTTTATTATACTC 58.096 33.333 0.00 0.00 35.62 2.59
4184 4542 8.352942 CCAAAGCCATCAACTTTATTATACTCC 58.647 37.037 0.00 0.00 35.62 3.85
4185 4543 8.352942 CAAAGCCATCAACTTTATTATACTCCC 58.647 37.037 0.00 0.00 35.62 4.30
4186 4544 6.543735 AGCCATCAACTTTATTATACTCCCC 58.456 40.000 0.00 0.00 0.00 4.81
4187 4545 5.710567 GCCATCAACTTTATTATACTCCCCC 59.289 44.000 0.00 0.00 0.00 5.40
4205 4563 4.004196 CCCCCGTTCCTAGATATTTGTC 57.996 50.000 0.00 0.00 0.00 3.18
4206 4564 3.646637 CCCCCGTTCCTAGATATTTGTCT 59.353 47.826 0.00 0.00 0.00 3.41
4207 4565 4.102681 CCCCCGTTCCTAGATATTTGTCTT 59.897 45.833 0.00 0.00 0.00 3.01
4208 4566 5.397559 CCCCCGTTCCTAGATATTTGTCTTT 60.398 44.000 0.00 0.00 0.00 2.52
4209 4567 6.120220 CCCCGTTCCTAGATATTTGTCTTTT 58.880 40.000 0.00 0.00 0.00 2.27
4210 4568 6.602009 CCCCGTTCCTAGATATTTGTCTTTTT 59.398 38.462 0.00 0.00 0.00 1.94
4211 4569 7.771826 CCCCGTTCCTAGATATTTGTCTTTTTA 59.228 37.037 0.00 0.00 0.00 1.52
4212 4570 8.827677 CCCGTTCCTAGATATTTGTCTTTTTAG 58.172 37.037 0.00 0.00 0.00 1.85
4213 4571 9.595823 CCGTTCCTAGATATTTGTCTTTTTAGA 57.404 33.333 0.00 0.00 0.00 2.10
4244 4602 9.567776 TTTAGAGATTTCAAATGAACTACCACA 57.432 29.630 0.00 0.00 33.13 4.17
4245 4603 9.739276 TTAGAGATTTCAAATGAACTACCACAT 57.261 29.630 0.00 0.00 33.13 3.21
4247 4605 9.167311 AGAGATTTCAAATGAACTACCACATAC 57.833 33.333 0.00 0.00 33.13 2.39
4248 4606 7.974675 AGATTTCAAATGAACTACCACATACG 58.025 34.615 0.00 0.00 33.13 3.06
4249 4607 6.489127 TTTCAAATGAACTACCACATACGG 57.511 37.500 0.00 0.00 33.13 4.02
4250 4608 5.408880 TCAAATGAACTACCACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
4251 4609 5.984725 TCAAATGAACTACCACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
4252 4610 5.815222 TCAAATGAACTACCACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
4254 4612 6.474140 AATGAACTACCACATACGGATGTA 57.526 37.500 14.23 0.00 44.82 2.29
4255 4613 6.665992 ATGAACTACCACATACGGATGTAT 57.334 37.500 14.23 7.46 44.82 2.29
4256 4614 7.770366 ATGAACTACCACATACGGATGTATA 57.230 36.000 14.23 8.27 44.82 1.47
4257 4615 7.770366 TGAACTACCACATACGGATGTATAT 57.230 36.000 14.23 4.37 44.82 0.86
4258 4616 8.866970 TGAACTACCACATACGGATGTATATA 57.133 34.615 14.23 5.36 44.82 0.86
4259 4617 8.953313 TGAACTACCACATACGGATGTATATAG 58.047 37.037 14.23 16.35 44.82 1.31
4260 4618 9.170734 GAACTACCACATACGGATGTATATAGA 57.829 37.037 22.62 5.04 44.82 1.98
4261 4619 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
4262 4620 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
4263 4621 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
4265 4623 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
4295 4653 6.410540 AGTGTAGATTCACTCATTTTCCTCC 58.589 40.000 0.00 0.00 44.07 4.30
4296 4654 5.292101 GTGTAGATTCACTCATTTTCCTCCG 59.708 44.000 0.00 0.00 35.68 4.63
4297 4655 4.559862 AGATTCACTCATTTTCCTCCGT 57.440 40.909 0.00 0.00 0.00 4.69
4298 4656 5.677319 AGATTCACTCATTTTCCTCCGTA 57.323 39.130 0.00 0.00 0.00 4.02
4299 4657 6.240549 AGATTCACTCATTTTCCTCCGTAT 57.759 37.500 0.00 0.00 0.00 3.06
4300 4658 7.361457 AGATTCACTCATTTTCCTCCGTATA 57.639 36.000 0.00 0.00 0.00 1.47
4301 4659 7.967908 AGATTCACTCATTTTCCTCCGTATAT 58.032 34.615 0.00 0.00 0.00 0.86
4302 4660 9.090103 AGATTCACTCATTTTCCTCCGTATATA 57.910 33.333 0.00 0.00 0.00 0.86
4303 4661 9.360093 GATTCACTCATTTTCCTCCGTATATAG 57.640 37.037 0.00 0.00 0.00 1.31
4304 4662 7.834881 TCACTCATTTTCCTCCGTATATAGT 57.165 36.000 0.00 0.00 0.00 2.12
4305 4663 8.929260 TCACTCATTTTCCTCCGTATATAGTA 57.071 34.615 0.00 0.00 0.00 1.82
4306 4664 9.358406 TCACTCATTTTCCTCCGTATATAGTAA 57.642 33.333 0.00 0.00 0.00 2.24
4307 4665 9.408069 CACTCATTTTCCTCCGTATATAGTAAC 57.592 37.037 0.00 0.00 0.00 2.50
4308 4666 9.364653 ACTCATTTTCCTCCGTATATAGTAACT 57.635 33.333 0.00 0.00 0.00 2.24
4310 4668 9.976511 TCATTTTCCTCCGTATATAGTAACTTG 57.023 33.333 0.00 0.00 0.00 3.16
4311 4669 9.760077 CATTTTCCTCCGTATATAGTAACTTGT 57.240 33.333 0.00 0.00 0.00 3.16
4313 4671 9.590451 TTTTCCTCCGTATATAGTAACTTGTTG 57.410 33.333 0.00 0.00 0.00 3.33
4314 4672 8.523915 TTCCTCCGTATATAGTAACTTGTTGA 57.476 34.615 0.00 0.00 0.00 3.18
4315 4673 8.523915 TCCTCCGTATATAGTAACTTGTTGAA 57.476 34.615 0.00 0.00 0.00 2.69
4316 4674 8.970020 TCCTCCGTATATAGTAACTTGTTGAAA 58.030 33.333 0.00 0.00 0.00 2.69
4317 4675 9.760077 CCTCCGTATATAGTAACTTGTTGAAAT 57.240 33.333 0.00 0.00 0.00 2.17
4330 4688 8.964476 AACTTGTTGAAATCTCTAGAAAGACA 57.036 30.769 0.00 0.00 0.00 3.41
4331 4689 8.964476 ACTTGTTGAAATCTCTAGAAAGACAA 57.036 30.769 0.00 0.00 0.00 3.18
4332 4690 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
4348 4706 8.893727 AGAAAGACAAATATTTATGAACGGAGG 58.106 33.333 0.00 0.00 0.00 4.30
4349 4707 7.568199 AAGACAAATATTTATGAACGGAGGG 57.432 36.000 0.00 0.00 0.00 4.30
4350 4708 6.895782 AGACAAATATTTATGAACGGAGGGA 58.104 36.000 0.00 0.00 0.00 4.20
4351 4709 6.992715 AGACAAATATTTATGAACGGAGGGAG 59.007 38.462 0.00 0.00 0.00 4.30
4766 5526 7.277098 GGTCTTTTTCACTTGAAAGGTAAAACC 59.723 37.037 4.66 0.71 43.90 3.27
4768 5528 4.904253 TTCACTTGAAAGGTAAAACCGG 57.096 40.909 0.00 0.00 44.90 5.28
4948 5715 8.798859 AATGATCCCTTTATGTGCATCTATAC 57.201 34.615 0.00 0.00 0.00 1.47
5026 5794 5.799936 CCTTGTTTTGCAACTAATGTATCGG 59.200 40.000 0.00 0.00 33.58 4.18
5201 6256 4.708421 ACTTTGTCTTATACCACGAGCCTA 59.292 41.667 0.00 0.00 0.00 3.93
5245 6307 4.073293 ACAGGTCGACTTCAAAGTGATT 57.927 40.909 16.46 0.00 39.88 2.57
5294 6381 0.529337 CAGCTGTAGTGAGCCGGATG 60.529 60.000 5.05 0.00 40.08 3.51
5369 6456 1.133025 CTGGATGCGAATGGTGTTTCC 59.867 52.381 0.00 0.00 0.00 3.13
5394 6481 7.176690 CCTTGTGGTTGTTATACCTTTGAAGAT 59.823 37.037 0.00 0.00 39.04 2.40
5434 6522 0.884704 GAGGGAGTGCAGAAACGCAA 60.885 55.000 0.00 0.00 45.14 4.85
5466 6560 3.604582 ACTCCTAGCTCTGAATTGCAAC 58.395 45.455 0.00 0.00 0.00 4.17
5572 6712 2.159296 ACACACGGTTGGAAAAGAAAGC 60.159 45.455 0.00 0.00 0.00 3.51
5588 6728 1.553706 AAGCAATCAAGGGCTTCAGG 58.446 50.000 0.00 0.00 46.82 3.86
5653 6795 1.737793 CCTGTCTATTTCCAACCACGC 59.262 52.381 0.00 0.00 0.00 5.34
5756 6898 3.072476 GCTCAAGCTGACCAGGGA 58.928 61.111 0.00 0.00 38.21 4.20
5757 6899 1.606531 GCTCAAGCTGACCAGGGAT 59.393 57.895 0.00 0.00 38.21 3.85
5758 6900 0.034670 GCTCAAGCTGACCAGGGATT 60.035 55.000 0.00 0.00 38.21 3.01
5760 6902 2.911484 CTCAAGCTGACCAGGGATTAC 58.089 52.381 0.00 0.00 0.00 1.89
5761 6903 2.503356 CTCAAGCTGACCAGGGATTACT 59.497 50.000 0.00 0.00 0.00 2.24
5762 6904 3.706594 CTCAAGCTGACCAGGGATTACTA 59.293 47.826 0.00 0.00 0.00 1.82
5763 6905 4.298626 TCAAGCTGACCAGGGATTACTAT 58.701 43.478 0.00 0.00 0.00 2.12
5764 6906 5.464069 TCAAGCTGACCAGGGATTACTATA 58.536 41.667 0.00 0.00 0.00 1.31
5766 6908 5.340891 AGCTGACCAGGGATTACTATAGA 57.659 43.478 6.78 0.00 0.00 1.98
5847 8420 9.701098 TGCTTACATAATTAATAAGTAGACCGG 57.299 33.333 0.00 0.00 0.00 5.28
5887 8513 4.373156 AATCCCATTAGATTTCCCCTCG 57.627 45.455 0.00 0.00 32.46 4.63
5891 8517 3.074538 CCCATTAGATTTCCCCTCGGATT 59.925 47.826 0.00 0.00 38.24 3.01
5897 8523 0.544697 TTTCCCCTCGGATTGCCTAC 59.455 55.000 0.00 0.00 38.24 3.18
5900 8526 2.819284 CCCTCGGATTGCCTACCCC 61.819 68.421 0.00 0.00 0.00 4.95
5913 8539 1.168714 CTACCCCAGAGCTGTTTTGC 58.831 55.000 0.00 0.00 0.00 3.68
5914 8540 0.605319 TACCCCAGAGCTGTTTTGCG 60.605 55.000 0.00 0.00 38.13 4.85
5915 8541 1.600636 CCCCAGAGCTGTTTTGCGA 60.601 57.895 0.00 0.00 38.13 5.10
5916 8542 0.962356 CCCCAGAGCTGTTTTGCGAT 60.962 55.000 0.00 0.00 38.13 4.58
5917 8543 0.883833 CCCAGAGCTGTTTTGCGATT 59.116 50.000 0.00 0.00 38.13 3.34
5918 8544 2.083774 CCCAGAGCTGTTTTGCGATTA 58.916 47.619 0.00 0.00 38.13 1.75
5919 8545 2.096496 CCCAGAGCTGTTTTGCGATTAG 59.904 50.000 0.00 0.00 38.13 1.73
5920 8546 3.002791 CCAGAGCTGTTTTGCGATTAGA 58.997 45.455 0.00 0.00 38.13 2.10
5921 8547 3.181516 CCAGAGCTGTTTTGCGATTAGAC 60.182 47.826 0.00 0.00 38.13 2.59
5922 8548 3.681897 CAGAGCTGTTTTGCGATTAGACT 59.318 43.478 0.00 0.00 38.13 3.24
5923 8549 3.929610 AGAGCTGTTTTGCGATTAGACTC 59.070 43.478 0.00 0.00 38.13 3.36
5924 8550 3.664107 AGCTGTTTTGCGATTAGACTCA 58.336 40.909 0.00 0.00 38.13 3.41
5925 8551 4.065088 AGCTGTTTTGCGATTAGACTCAA 58.935 39.130 0.00 0.00 38.13 3.02
5926 8552 4.697352 AGCTGTTTTGCGATTAGACTCAAT 59.303 37.500 0.00 0.00 38.13 2.57
5927 8553 5.024555 GCTGTTTTGCGATTAGACTCAATC 58.975 41.667 0.00 0.00 0.00 2.67
5928 8554 5.390885 GCTGTTTTGCGATTAGACTCAATCA 60.391 40.000 0.00 0.00 35.09 2.57
5929 8555 6.169419 TGTTTTGCGATTAGACTCAATCAG 57.831 37.500 0.00 0.00 35.09 2.90
5930 8556 5.700832 TGTTTTGCGATTAGACTCAATCAGT 59.299 36.000 0.00 0.00 38.45 3.41
5931 8557 6.871492 TGTTTTGCGATTAGACTCAATCAGTA 59.129 34.615 0.00 0.00 34.41 2.74
5932 8558 6.887376 TTTGCGATTAGACTCAATCAGTAC 57.113 37.500 0.00 0.00 34.41 2.73
5961 8587 2.671177 CCTGTTTCTCGTGCCAGCG 61.671 63.158 0.00 0.00 0.00 5.18
5965 8591 1.005037 TTTCTCGTGCCAGCGACAT 60.005 52.632 0.00 0.00 36.80 3.06
6016 8642 2.596338 CCCCCAGACGCGGTTTTT 60.596 61.111 12.47 0.00 0.00 1.94
6039 8665 6.642683 TTTTAAACAAAAACGAATTCGGCA 57.357 29.167 29.79 3.16 44.95 5.69
6040 8666 6.642683 TTTAAACAAAAACGAATTCGGCAA 57.357 29.167 29.79 8.52 44.95 4.52
6041 8667 6.642683 TTAAACAAAAACGAATTCGGCAAA 57.357 29.167 29.79 9.26 44.95 3.68
6042 8668 4.770351 AACAAAAACGAATTCGGCAAAG 57.230 36.364 29.79 18.61 44.95 2.77
6043 8669 3.776340 ACAAAAACGAATTCGGCAAAGT 58.224 36.364 29.79 19.20 44.95 2.66
6044 8670 4.177783 ACAAAAACGAATTCGGCAAAGTT 58.822 34.783 29.79 12.47 44.95 2.66
6045 8671 4.266739 ACAAAAACGAATTCGGCAAAGTTC 59.733 37.500 29.79 0.00 44.95 3.01
6046 8672 2.309898 AACGAATTCGGCAAAGTTCG 57.690 45.000 29.79 11.78 46.29 3.95
6047 8673 0.515564 ACGAATTCGGCAAAGTTCGG 59.484 50.000 29.79 0.09 45.45 4.30
6048 8674 0.793104 CGAATTCGGCAAAGTTCGGC 60.793 55.000 20.16 0.00 39.62 5.54
6049 8675 0.239879 GAATTCGGCAAAGTTCGGCA 59.760 50.000 0.00 0.00 0.00 5.69
6050 8676 0.671251 AATTCGGCAAAGTTCGGCAA 59.329 45.000 2.40 0.00 0.00 4.52
6051 8677 0.671251 ATTCGGCAAAGTTCGGCAAA 59.329 45.000 2.40 0.00 0.00 3.68
6052 8678 0.671251 TTCGGCAAAGTTCGGCAAAT 59.329 45.000 2.40 0.00 0.00 2.32
6053 8679 0.671251 TCGGCAAAGTTCGGCAAATT 59.329 45.000 2.40 0.00 0.00 1.82
6054 8680 0.783579 CGGCAAAGTTCGGCAAATTG 59.216 50.000 2.40 0.00 0.00 2.32
6055 8681 1.147473 GGCAAAGTTCGGCAAATTGG 58.853 50.000 0.00 0.00 0.00 3.16
6056 8682 1.270041 GGCAAAGTTCGGCAAATTGGA 60.270 47.619 0.00 0.00 0.00 3.53
6057 8683 1.792367 GCAAAGTTCGGCAAATTGGAC 59.208 47.619 0.00 0.00 0.00 4.02
6058 8684 2.801342 GCAAAGTTCGGCAAATTGGACA 60.801 45.455 0.00 0.00 0.00 4.02
6059 8685 3.452474 CAAAGTTCGGCAAATTGGACAA 58.548 40.909 0.00 0.00 0.00 3.18
6060 8686 3.810310 AAGTTCGGCAAATTGGACAAA 57.190 38.095 0.00 0.00 0.00 2.83
6061 8687 3.810310 AGTTCGGCAAATTGGACAAAA 57.190 38.095 0.00 0.00 0.00 2.44
6062 8688 3.453424 AGTTCGGCAAATTGGACAAAAC 58.547 40.909 0.00 0.00 0.00 2.43
6063 8689 2.126914 TCGGCAAATTGGACAAAACG 57.873 45.000 0.00 0.00 0.00 3.60
6064 8690 1.405821 TCGGCAAATTGGACAAAACGT 59.594 42.857 0.00 0.00 0.00 3.99
6065 8691 2.159226 TCGGCAAATTGGACAAAACGTT 60.159 40.909 0.00 0.00 0.00 3.99
6066 8692 2.605366 CGGCAAATTGGACAAAACGTTT 59.395 40.909 7.96 7.96 0.00 3.60
6067 8693 3.797256 CGGCAAATTGGACAAAACGTTTA 59.203 39.130 15.03 0.00 0.00 2.01
6068 8694 4.085312 CGGCAAATTGGACAAAACGTTTAG 60.085 41.667 15.03 0.00 0.00 1.85
6069 8695 4.318475 GGCAAATTGGACAAAACGTTTAGC 60.318 41.667 15.03 6.56 0.00 3.09
6070 8696 4.506288 GCAAATTGGACAAAACGTTTAGCT 59.494 37.500 15.03 0.00 0.00 3.32
6071 8697 5.556194 GCAAATTGGACAAAACGTTTAGCTG 60.556 40.000 15.03 11.64 0.00 4.24
6072 8698 5.508200 AATTGGACAAAACGTTTAGCTGA 57.492 34.783 15.03 0.00 0.00 4.26
6073 8699 4.966965 TTGGACAAAACGTTTAGCTGAA 57.033 36.364 15.03 2.50 0.00 3.02
6074 8700 4.545823 TGGACAAAACGTTTAGCTGAAG 57.454 40.909 15.03 1.62 0.00 3.02
6075 8701 3.942748 TGGACAAAACGTTTAGCTGAAGT 59.057 39.130 15.03 4.73 0.00 3.01
6076 8702 4.396790 TGGACAAAACGTTTAGCTGAAGTT 59.603 37.500 15.03 0.00 0.00 2.66
6077 8703 4.968181 GGACAAAACGTTTAGCTGAAGTTC 59.032 41.667 15.03 2.92 0.00 3.01
6078 8704 4.584394 ACAAAACGTTTAGCTGAAGTTCG 58.416 39.130 15.03 0.00 0.00 3.95
6079 8705 3.872560 AAACGTTTAGCTGAAGTTCGG 57.127 42.857 12.83 7.38 0.00 4.30
6098 8724 8.018677 AGTTCGGCAAACTTGATATATATTCG 57.981 34.615 0.00 0.00 46.26 3.34
6099 8725 7.870954 AGTTCGGCAAACTTGATATATATTCGA 59.129 33.333 0.00 0.00 46.26 3.71
6100 8726 7.576750 TCGGCAAACTTGATATATATTCGAC 57.423 36.000 0.00 0.00 0.00 4.20
6101 8727 7.149307 TCGGCAAACTTGATATATATTCGACA 58.851 34.615 0.00 0.00 0.00 4.35
6102 8728 7.817478 TCGGCAAACTTGATATATATTCGACAT 59.183 33.333 0.00 0.00 0.00 3.06
6103 8729 7.899841 CGGCAAACTTGATATATATTCGACATG 59.100 37.037 0.00 0.00 0.00 3.21
6104 8730 8.721478 GGCAAACTTGATATATATTCGACATGT 58.279 33.333 0.00 0.00 0.00 3.21
6123 8749 8.112099 GACATGTTCGACGTTACATAATAAGT 57.888 34.615 14.66 10.00 33.42 2.24
6124 8750 8.470040 ACATGTTCGACGTTACATAATAAGTT 57.530 30.769 14.66 0.00 33.42 2.66
6125 8751 9.571810 ACATGTTCGACGTTACATAATAAGTTA 57.428 29.630 14.66 0.00 33.42 2.24
6148 8774 2.368311 AAAAACCAACTAAGGGGCGA 57.632 45.000 0.00 0.00 0.00 5.54
6149 8775 2.368311 AAAACCAACTAAGGGGCGAA 57.632 45.000 0.00 0.00 0.00 4.70
6150 8776 1.905637 AAACCAACTAAGGGGCGAAG 58.094 50.000 0.00 0.00 0.00 3.79
6151 8777 1.061546 AACCAACTAAGGGGCGAAGA 58.938 50.000 0.00 0.00 0.00 2.87
6152 8778 1.061546 ACCAACTAAGGGGCGAAGAA 58.938 50.000 0.00 0.00 0.00 2.52
6153 8779 1.003233 ACCAACTAAGGGGCGAAGAAG 59.997 52.381 0.00 0.00 0.00 2.85
6154 8780 1.003233 CCAACTAAGGGGCGAAGAAGT 59.997 52.381 0.00 0.00 0.00 3.01
6155 8781 2.347731 CAACTAAGGGGCGAAGAAGTC 58.652 52.381 0.00 0.00 0.00 3.01
6192 8818 4.907034 CCGCCATCCTCGTCGTCG 62.907 72.222 0.00 0.00 38.55 5.12
6193 8819 4.175489 CGCCATCCTCGTCGTCGT 62.175 66.667 1.33 0.00 38.33 4.34
6194 8820 2.278013 GCCATCCTCGTCGTCGTC 60.278 66.667 1.33 0.00 38.33 4.20
6195 8821 2.022902 CCATCCTCGTCGTCGTCG 59.977 66.667 5.50 5.50 38.33 5.12
6196 8822 2.022902 CATCCTCGTCGTCGTCGG 59.977 66.667 11.74 4.59 38.33 4.79
6197 8823 3.873883 ATCCTCGTCGTCGTCGGC 61.874 66.667 11.74 0.00 38.40 5.54
6200 8826 4.099170 CTCGTCGTCGTCGGCCTT 62.099 66.667 11.74 0.00 38.56 4.35
6201 8827 3.996744 CTCGTCGTCGTCGGCCTTC 62.997 68.421 11.74 0.00 38.56 3.46
6202 8828 4.099170 CGTCGTCGTCGGCCTTCT 62.099 66.667 0.00 0.00 38.56 2.85
6203 8829 2.202453 GTCGTCGTCGGCCTTCTC 60.202 66.667 0.00 0.00 35.48 2.87
6204 8830 3.437795 TCGTCGTCGGCCTTCTCC 61.438 66.667 0.00 0.00 37.69 3.71
6205 8831 3.441290 CGTCGTCGGCCTTCTCCT 61.441 66.667 0.00 0.00 0.00 3.69
6206 8832 2.971452 GTCGTCGGCCTTCTCCTT 59.029 61.111 0.00 0.00 0.00 3.36
6207 8833 1.153804 GTCGTCGGCCTTCTCCTTC 60.154 63.158 0.00 0.00 0.00 3.46
6208 8834 1.304217 TCGTCGGCCTTCTCCTTCT 60.304 57.895 0.00 0.00 0.00 2.85
6209 8835 0.898789 TCGTCGGCCTTCTCCTTCTT 60.899 55.000 0.00 0.00 0.00 2.52
6210 8836 0.737715 CGTCGGCCTTCTCCTTCTTG 60.738 60.000 0.00 0.00 0.00 3.02
6211 8837 0.608640 GTCGGCCTTCTCCTTCTTGA 59.391 55.000 0.00 0.00 0.00 3.02
6212 8838 1.208293 GTCGGCCTTCTCCTTCTTGAT 59.792 52.381 0.00 0.00 0.00 2.57
6213 8839 1.208052 TCGGCCTTCTCCTTCTTGATG 59.792 52.381 0.00 0.00 0.00 3.07
6214 8840 1.387539 GGCCTTCTCCTTCTTGATGC 58.612 55.000 0.00 0.00 0.00 3.91
6215 8841 1.012841 GCCTTCTCCTTCTTGATGCG 58.987 55.000 0.00 0.00 0.00 4.73
6216 8842 1.661341 CCTTCTCCTTCTTGATGCGG 58.339 55.000 0.00 0.00 0.00 5.69
6217 8843 1.012841 CTTCTCCTTCTTGATGCGGC 58.987 55.000 0.00 0.00 0.00 6.53
6218 8844 0.392998 TTCTCCTTCTTGATGCGGCC 60.393 55.000 0.00 0.00 0.00 6.13
6219 8845 1.078214 CTCCTTCTTGATGCGGCCA 60.078 57.895 2.24 0.00 0.00 5.36
6220 8846 1.372087 CTCCTTCTTGATGCGGCCAC 61.372 60.000 2.24 0.00 0.00 5.01
6221 8847 2.409870 CCTTCTTGATGCGGCCACC 61.410 63.158 2.24 0.00 0.00 4.61
6222 8848 2.361104 TTCTTGATGCGGCCACCC 60.361 61.111 2.24 0.00 0.00 4.61
6223 8849 3.936772 TTCTTGATGCGGCCACCCC 62.937 63.158 2.24 0.00 0.00 4.95
6224 8850 4.431131 CTTGATGCGGCCACCCCT 62.431 66.667 2.24 0.00 0.00 4.79
6225 8851 4.738998 TTGATGCGGCCACCCCTG 62.739 66.667 2.24 0.00 0.00 4.45
6232 8858 4.512914 GGCCACCCCTGCTGGATC 62.513 72.222 11.88 0.00 35.39 3.36
6233 8859 4.512914 GCCACCCCTGCTGGATCC 62.513 72.222 11.88 4.20 35.39 3.36
6234 8860 3.813724 CCACCCCTGCTGGATCCC 61.814 72.222 11.88 0.00 35.39 3.85
6235 8861 2.693864 CACCCCTGCTGGATCCCT 60.694 66.667 11.88 0.00 35.39 4.20
6236 8862 2.693864 ACCCCTGCTGGATCCCTG 60.694 66.667 11.88 3.18 35.39 4.45
6237 8863 4.201122 CCCCTGCTGGATCCCTGC 62.201 72.222 11.88 17.02 46.46 4.85
6238 8864 4.201122 CCCTGCTGGATCCCTGCC 62.201 72.222 19.88 3.37 45.86 4.85
6239 8865 4.201122 CCTGCTGGATCCCTGCCC 62.201 72.222 19.88 1.79 45.86 5.36
6240 8866 4.559063 CTGCTGGATCCCTGCCCG 62.559 72.222 19.88 10.24 45.86 6.13
6242 8868 4.554036 GCTGGATCCCTGCCCGTC 62.554 72.222 9.90 0.00 41.62 4.79
6243 8869 4.227134 CTGGATCCCTGCCCGTCG 62.227 72.222 9.90 0.00 0.00 5.12
6245 8871 4.222847 GGATCCCTGCCCGTCGTC 62.223 72.222 0.00 0.00 0.00 4.20
6246 8872 4.570663 GATCCCTGCCCGTCGTCG 62.571 72.222 0.00 0.00 0.00 5.12
6265 8891 4.717629 CGCTGTCGCCGAGGACAA 62.718 66.667 9.30 0.00 45.59 3.18
6266 8892 3.112709 GCTGTCGCCGAGGACAAC 61.113 66.667 9.30 2.57 45.59 3.32
6267 8893 2.805353 CTGTCGCCGAGGACAACG 60.805 66.667 9.30 0.00 45.59 4.10
6268 8894 3.263503 CTGTCGCCGAGGACAACGA 62.264 63.158 9.30 0.00 45.59 3.85
6269 8895 2.804090 GTCGCCGAGGACAACGAC 60.804 66.667 0.00 0.00 46.64 4.34
6270 8896 4.394078 TCGCCGAGGACAACGACG 62.394 66.667 0.00 0.00 37.89 5.12
6273 8899 4.052229 CCGAGGACAACGACGCCT 62.052 66.667 0.00 0.00 33.97 5.52
6274 8900 2.504244 CGAGGACAACGACGCCTC 60.504 66.667 8.67 8.67 43.73 4.70
6275 8901 2.126031 GAGGACAACGACGCCTCC 60.126 66.667 7.74 3.50 41.84 4.30
6276 8902 3.644399 GAGGACAACGACGCCTCCC 62.644 68.421 7.74 0.00 41.84 4.30
6277 8903 3.692406 GGACAACGACGCCTCCCT 61.692 66.667 0.00 0.00 0.00 4.20
6278 8904 2.126031 GACAACGACGCCTCCCTC 60.126 66.667 0.00 0.00 0.00 4.30
6279 8905 3.966026 GACAACGACGCCTCCCTCG 62.966 68.421 0.00 0.00 35.96 4.63
6280 8906 4.052229 CAACGACGCCTCCCTCGT 62.052 66.667 0.00 0.00 44.89 4.18
6307 8933 3.179939 GACGCCGAGCTTCGAACC 61.180 66.667 10.25 0.00 43.74 3.62
6311 8937 2.881352 CCGAGCTTCGAACCGCTC 60.881 66.667 22.84 22.84 43.74 5.03
6339 8965 4.940593 CGCTGGCGCTCTAGCTCC 62.941 72.222 22.40 3.99 45.67 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 107 1.460273 AACACGCCACCAACAATCCC 61.460 55.000 0.00 0.00 0.00 3.85
227 230 2.565391 TCACTCATCTCCACGCCTTAAA 59.435 45.455 0.00 0.00 0.00 1.52
230 233 0.247736 GTCACTCATCTCCACGCCTT 59.752 55.000 0.00 0.00 0.00 4.35
401 404 2.178876 ATCGTGCCGATTCCACACCA 62.179 55.000 4.51 0.00 44.59 4.17
425 428 1.394227 GAGAGACGACATCGAAGACGT 59.606 52.381 17.09 17.09 42.51 4.34
642 646 3.479269 GCTTCCCTCGTCAACGCG 61.479 66.667 3.53 3.53 39.60 6.01
670 677 0.756294 TCACCTCCGAAGAACAGCAA 59.244 50.000 0.00 0.00 0.00 3.91
721 728 2.091830 GCAGAAGGCCCTACCCTAATTT 60.092 50.000 0.00 0.00 40.58 1.82
739 746 2.596575 CGACAACACAACTACAACGCAG 60.597 50.000 0.00 0.00 0.00 5.18
745 752 2.623535 AGCAACGACAACACAACTACA 58.376 42.857 0.00 0.00 0.00 2.74
766 773 1.394618 CGGCTAGTCTAAGGACAGCT 58.605 55.000 14.73 0.00 44.36 4.24
776 783 0.542232 ACTCCACAACCGGCTAGTCT 60.542 55.000 0.00 0.00 0.00 3.24
857 864 7.255312 CCCAAATTGCGTACCATAGCTTTATAA 60.255 37.037 0.00 0.00 0.00 0.98
890 897 1.068541 GCCAGCTTCGATTCGGTTTTT 60.069 47.619 6.18 0.00 0.00 1.94
891 898 0.521735 GCCAGCTTCGATTCGGTTTT 59.478 50.000 6.18 0.00 0.00 2.43
892 899 1.635663 CGCCAGCTTCGATTCGGTTT 61.636 55.000 6.18 0.00 0.00 3.27
893 900 2.100631 CGCCAGCTTCGATTCGGTT 61.101 57.895 6.18 0.00 0.00 4.44
894 901 2.509336 CGCCAGCTTCGATTCGGT 60.509 61.111 6.18 0.00 0.00 4.69
895 902 2.202743 TCGCCAGCTTCGATTCGG 60.203 61.111 6.18 0.00 0.00 4.30
896 903 1.226688 TCTCGCCAGCTTCGATTCG 60.227 57.895 8.12 0.00 35.25 3.34
897 904 1.148759 GGTCTCGCCAGCTTCGATTC 61.149 60.000 8.12 5.20 35.25 2.52
898 905 1.153549 GGTCTCGCCAGCTTCGATT 60.154 57.895 8.12 0.00 35.25 3.34
899 906 2.351244 TGGTCTCGCCAGCTTCGAT 61.351 57.895 8.12 0.00 43.61 3.59
900 907 2.989253 TGGTCTCGCCAGCTTCGA 60.989 61.111 7.51 7.51 43.61 3.71
907 914 2.283173 TCTGCTCTGGTCTCGCCA 60.283 61.111 0.00 0.00 46.95 5.69
924 931 3.944945 GGTTTGGTCGGGTCGGGT 61.945 66.667 0.00 0.00 0.00 5.28
932 939 1.043673 TTGGGGTTTGGGTTTGGTCG 61.044 55.000 0.00 0.00 0.00 4.79
933 940 1.134340 GTTTGGGGTTTGGGTTTGGTC 60.134 52.381 0.00 0.00 0.00 4.02
936 943 0.181587 GGGTTTGGGGTTTGGGTTTG 59.818 55.000 0.00 0.00 0.00 2.93
937 944 0.989212 GGGGTTTGGGGTTTGGGTTT 60.989 55.000 0.00 0.00 0.00 3.27
940 947 2.528127 GGGGGTTTGGGGTTTGGG 60.528 66.667 0.00 0.00 0.00 4.12
941 948 2.920384 CGGGGGTTTGGGGTTTGG 60.920 66.667 0.00 0.00 0.00 3.28
942 949 2.123208 ACGGGGGTTTGGGGTTTG 60.123 61.111 0.00 0.00 0.00 2.93
943 950 2.123208 CACGGGGGTTTGGGGTTT 60.123 61.111 0.00 0.00 0.00 3.27
944 951 2.932569 GAACACGGGGGTTTGGGGTT 62.933 60.000 0.00 0.00 0.00 4.11
945 952 3.431415 AACACGGGGGTTTGGGGT 61.431 61.111 0.00 0.00 0.00 4.95
946 953 2.599281 GAACACGGGGGTTTGGGG 60.599 66.667 0.00 0.00 0.00 4.96
1087 1094 2.552315 GAGTCTCTTGATAGGAGGCGAG 59.448 54.545 0.00 0.00 40.02 5.03
1097 1104 1.608717 AAGGCGCGGAGTCTCTTGAT 61.609 55.000 8.83 0.00 30.46 2.57
1098 1105 2.214181 GAAGGCGCGGAGTCTCTTGA 62.214 60.000 8.83 0.00 30.46 3.02
1100 1107 2.574399 GAAGGCGCGGAGTCTCTT 59.426 61.111 8.83 0.00 30.46 2.85
1101 1108 3.453679 GGAAGGCGCGGAGTCTCT 61.454 66.667 8.83 0.00 30.46 3.10
1103 1110 4.070552 GTGGAAGGCGCGGAGTCT 62.071 66.667 8.83 0.00 35.45 3.24
1104 1111 3.665675 ATGTGGAAGGCGCGGAGTC 62.666 63.158 8.83 0.00 0.00 3.36
1105 1112 3.665675 GATGTGGAAGGCGCGGAGT 62.666 63.158 8.83 0.00 0.00 3.85
1176 1255 4.500116 GGCTCGTCAGGTCTCGGC 62.500 72.222 0.00 0.00 0.00 5.54
1430 1522 0.032813 ACGTCCCCGAATTCCTCCTA 60.033 55.000 0.00 0.00 37.88 2.94
1506 1598 0.526524 CGTTCTCAGCACGATCCCTC 60.527 60.000 0.00 0.00 40.20 4.30
1507 1599 1.513158 CGTTCTCAGCACGATCCCT 59.487 57.895 0.00 0.00 40.20 4.20
1510 1602 2.493713 ATACCGTTCTCAGCACGATC 57.506 50.000 0.00 0.00 40.20 3.69
1634 1765 1.086696 CTACAACCCAGACATTGGCG 58.913 55.000 0.00 0.00 46.32 5.69
1657 1788 5.716094 TGATGATGAGGCAATTGTTTTCTG 58.284 37.500 7.40 0.00 0.00 3.02
1715 1846 3.332919 CCAGAGACCTTCAGTGAACATG 58.667 50.000 0.08 0.00 0.00 3.21
1794 1936 4.106029 TCCTCGACCTGAATAAAACGAG 57.894 45.455 0.00 0.00 44.05 4.18
1810 1952 1.605753 TCTCATCCGTGGTATCCTCG 58.394 55.000 3.70 3.70 39.77 4.63
1821 1963 1.218763 CAGCTCTTGCATCTCATCCG 58.781 55.000 0.00 0.00 42.74 4.18
1887 2029 7.350382 TGGTAATGCAAAATATAGGAGGAACA 58.650 34.615 0.00 0.00 0.00 3.18
1899 2041 4.019501 TGGCTCCAAATGGTAATGCAAAAT 60.020 37.500 0.00 0.00 36.34 1.82
1909 2051 3.099141 CCAGTAAATGGCTCCAAATGGT 58.901 45.455 0.00 0.00 43.83 3.55
1994 2136 0.261696 AAGCAACACCAACCTTCCCT 59.738 50.000 0.00 0.00 0.00 4.20
1998 2149 3.385193 GCAATAAGCAACACCAACCTT 57.615 42.857 0.00 0.00 44.79 3.50
2165 2430 9.220767 GCTTTCTTCTCTTCAACTCCTTTATTA 57.779 33.333 0.00 0.00 0.00 0.98
2321 2591 7.610305 TCCCTTCTTCAGTGAATACCAAATAAC 59.390 37.037 5.91 0.00 0.00 1.89
2322 2592 7.610305 GTCCCTTCTTCAGTGAATACCAAATAA 59.390 37.037 5.91 0.00 0.00 1.40
2374 2644 1.076332 GTGTCACATCGGTAGCCAAC 58.924 55.000 0.00 0.00 0.00 3.77
2483 2776 6.382570 AGCAATGAGGAGTCTTCTATGTAGTT 59.617 38.462 3.69 0.00 0.00 2.24
2508 2801 6.650807 CAGCTGGACTATGTACAAGAGAAAAA 59.349 38.462 5.57 0.00 0.00 1.94
2521 2814 7.613801 AGATAGGATAAGTACAGCTGGACTATG 59.386 40.741 31.73 0.00 0.00 2.23
2526 2819 5.706447 ACAGATAGGATAAGTACAGCTGGA 58.294 41.667 19.93 6.60 0.00 3.86
2721 3029 2.450476 CAATAGGTTGCCCTTGAGCTT 58.550 47.619 0.00 0.00 42.66 3.74
2975 3284 5.056480 TCACTGAACCTGTTACATCAAGTG 58.944 41.667 0.00 0.00 0.00 3.16
3138 3471 8.506168 TGTCACCAATCTATCAATCCTAAAAC 57.494 34.615 0.00 0.00 0.00 2.43
3139 3472 8.956426 GTTGTCACCAATCTATCAATCCTAAAA 58.044 33.333 0.00 0.00 32.11 1.52
3140 3473 8.106462 TGTTGTCACCAATCTATCAATCCTAAA 58.894 33.333 0.00 0.00 32.11 1.85
3141 3474 7.552687 GTGTTGTCACCAATCTATCAATCCTAA 59.447 37.037 0.00 0.00 38.51 2.69
3142 3475 7.047891 GTGTTGTCACCAATCTATCAATCCTA 58.952 38.462 0.00 0.00 38.51 2.94
3144 3477 6.124088 GTGTTGTCACCAATCTATCAATCC 57.876 41.667 0.00 0.00 38.51 3.01
3171 3504 8.383318 ACATTGCCTTGTCATATACTCATAAC 57.617 34.615 0.00 0.00 0.00 1.89
3190 3523 9.809096 ACTATGATATGCTATACACTACATTGC 57.191 33.333 0.00 0.00 0.00 3.56
3265 3601 6.238842 CCAAAGGAAAGACAGCCATACATATG 60.239 42.308 0.00 0.00 0.00 1.78
3266 3602 5.829924 CCAAAGGAAAGACAGCCATACATAT 59.170 40.000 0.00 0.00 0.00 1.78
3380 3730 5.373222 ACTGTTGGCTGAACATAAGTTACA 58.627 37.500 2.86 0.00 43.78 2.41
3381 3731 5.941948 ACTGTTGGCTGAACATAAGTTAC 57.058 39.130 2.86 0.00 43.78 2.50
3382 3732 5.240623 CCAACTGTTGGCTGAACATAAGTTA 59.759 40.000 25.21 0.00 43.78 2.24
3383 3733 4.037923 CCAACTGTTGGCTGAACATAAGTT 59.962 41.667 25.21 2.30 43.78 2.66
3567 3918 4.479619 GCAGACAGCAACCTCAAATTAAG 58.520 43.478 0.00 0.00 44.79 1.85
3811 4166 2.612212 TGTCAAGAAAAACAGACCTCGC 59.388 45.455 0.00 0.00 0.00 5.03
3812 4167 4.875544 TTGTCAAGAAAAACAGACCTCG 57.124 40.909 0.00 0.00 0.00 4.63
3904 4260 0.321564 CGGTCCACAGCTTCATTCCA 60.322 55.000 0.00 0.00 0.00 3.53
4059 4417 4.015084 AGACCTGAAATCAGAAGCATTGG 58.985 43.478 11.94 0.00 46.59 3.16
4111 4469 4.603094 TCCTCCAGTACACCTATCAGAA 57.397 45.455 0.00 0.00 0.00 3.02
4184 4542 3.646637 AGACAAATATCTAGGAACGGGGG 59.353 47.826 0.00 0.00 0.00 5.40
4185 4543 4.957684 AGACAAATATCTAGGAACGGGG 57.042 45.455 0.00 0.00 0.00 5.73
4186 4544 7.625828 AAAAAGACAAATATCTAGGAACGGG 57.374 36.000 0.00 0.00 0.00 5.28
4187 4545 9.595823 TCTAAAAAGACAAATATCTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4218 4576 9.567776 TGTGGTAGTTCATTTGAAATCTCTAAA 57.432 29.630 0.00 0.00 35.58 1.85
4219 4577 9.739276 ATGTGGTAGTTCATTTGAAATCTCTAA 57.261 29.630 0.00 0.00 35.58 2.10
4221 4579 9.167311 GTATGTGGTAGTTCATTTGAAATCTCT 57.833 33.333 0.00 0.00 35.58 3.10
4222 4580 8.116753 CGTATGTGGTAGTTCATTTGAAATCTC 58.883 37.037 0.00 0.00 35.58 2.75
4223 4581 7.065803 CCGTATGTGGTAGTTCATTTGAAATCT 59.934 37.037 0.00 0.00 35.58 2.40
4224 4582 7.065324 TCCGTATGTGGTAGTTCATTTGAAATC 59.935 37.037 0.00 0.00 35.58 2.17
4225 4583 6.882140 TCCGTATGTGGTAGTTCATTTGAAAT 59.118 34.615 0.00 0.00 35.58 2.17
4226 4584 6.231951 TCCGTATGTGGTAGTTCATTTGAAA 58.768 36.000 0.00 0.00 35.58 2.69
4227 4585 5.795972 TCCGTATGTGGTAGTTCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
4228 4586 5.408880 TCCGTATGTGGTAGTTCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
4229 4587 5.584649 ACATCCGTATGTGGTAGTTCATTTG 59.415 40.000 0.00 0.00 44.79 2.32
4230 4588 5.741011 ACATCCGTATGTGGTAGTTCATTT 58.259 37.500 0.00 0.00 44.79 2.32
4231 4589 5.353394 ACATCCGTATGTGGTAGTTCATT 57.647 39.130 0.00 0.00 44.79 2.57
4232 4590 6.665992 ATACATCCGTATGTGGTAGTTCAT 57.334 37.500 3.56 0.00 45.99 2.57
4233 4591 7.770366 ATATACATCCGTATGTGGTAGTTCA 57.230 36.000 3.56 0.00 45.99 3.18
4234 4592 9.170734 TCTATATACATCCGTATGTGGTAGTTC 57.829 37.037 3.56 0.00 45.99 3.01
4235 4593 8.954350 GTCTATATACATCCGTATGTGGTAGTT 58.046 37.037 3.56 0.00 45.99 2.24
4236 4594 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
4237 4595 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
4239 4597 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
4272 4630 5.292101 CGGAGGAAAATGAGTGAATCTACAC 59.708 44.000 0.00 0.00 40.60 2.90
4273 4631 5.046591 ACGGAGGAAAATGAGTGAATCTACA 60.047 40.000 0.00 0.00 0.00 2.74
4274 4632 5.420409 ACGGAGGAAAATGAGTGAATCTAC 58.580 41.667 0.00 0.00 0.00 2.59
4275 4633 5.677319 ACGGAGGAAAATGAGTGAATCTA 57.323 39.130 0.00 0.00 0.00 1.98
4276 4634 4.559862 ACGGAGGAAAATGAGTGAATCT 57.440 40.909 0.00 0.00 0.00 2.40
4277 4635 9.360093 CTATATACGGAGGAAAATGAGTGAATC 57.640 37.037 0.00 0.00 0.00 2.52
4278 4636 8.871125 ACTATATACGGAGGAAAATGAGTGAAT 58.129 33.333 0.00 0.00 0.00 2.57
4279 4637 8.246430 ACTATATACGGAGGAAAATGAGTGAA 57.754 34.615 0.00 0.00 0.00 3.18
4280 4638 7.834881 ACTATATACGGAGGAAAATGAGTGA 57.165 36.000 0.00 0.00 0.00 3.41
4281 4639 9.408069 GTTACTATATACGGAGGAAAATGAGTG 57.592 37.037 0.00 0.00 0.00 3.51
4282 4640 9.364653 AGTTACTATATACGGAGGAAAATGAGT 57.635 33.333 0.00 0.00 0.00 3.41
4284 4642 9.976511 CAAGTTACTATATACGGAGGAAAATGA 57.023 33.333 0.00 0.00 0.00 2.57
4285 4643 9.760077 ACAAGTTACTATATACGGAGGAAAATG 57.240 33.333 0.00 0.00 0.00 2.32
4287 4645 9.590451 CAACAAGTTACTATATACGGAGGAAAA 57.410 33.333 0.00 0.00 0.00 2.29
4288 4646 8.970020 TCAACAAGTTACTATATACGGAGGAAA 58.030 33.333 0.00 0.00 0.00 3.13
4289 4647 8.523915 TCAACAAGTTACTATATACGGAGGAA 57.476 34.615 0.00 0.00 0.00 3.36
4290 4648 8.523915 TTCAACAAGTTACTATATACGGAGGA 57.476 34.615 0.00 0.00 0.00 3.71
4291 4649 9.760077 ATTTCAACAAGTTACTATATACGGAGG 57.240 33.333 0.00 0.00 0.00 4.30
4305 4663 8.964476 TGTCTTTCTAGAGATTTCAACAAGTT 57.036 30.769 0.00 0.00 0.00 2.66
4306 4664 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
4322 4680 8.893727 CCTCCGTTCATAAATATTTGTCTTTCT 58.106 33.333 11.05 0.00 0.00 2.52
4323 4681 8.129211 CCCTCCGTTCATAAATATTTGTCTTTC 58.871 37.037 11.05 0.00 0.00 2.62
4324 4682 7.832187 TCCCTCCGTTCATAAATATTTGTCTTT 59.168 33.333 11.05 0.00 0.00 2.52
4325 4683 7.343357 TCCCTCCGTTCATAAATATTTGTCTT 58.657 34.615 11.05 0.00 0.00 3.01
4326 4684 6.895782 TCCCTCCGTTCATAAATATTTGTCT 58.104 36.000 11.05 0.00 0.00 3.41
4327 4685 6.766467 ACTCCCTCCGTTCATAAATATTTGTC 59.234 38.462 11.05 0.00 0.00 3.18
4328 4686 6.659824 ACTCCCTCCGTTCATAAATATTTGT 58.340 36.000 11.05 0.84 0.00 2.83
4329 4687 8.671384 TTACTCCCTCCGTTCATAAATATTTG 57.329 34.615 11.05 0.00 0.00 2.32
4336 4694 9.938280 CATAAATATTACTCCCTCCGTTCATAA 57.062 33.333 0.00 0.00 0.00 1.90
4337 4695 8.537016 CCATAAATATTACTCCCTCCGTTCATA 58.463 37.037 0.00 0.00 0.00 2.15
4338 4696 7.236847 TCCATAAATATTACTCCCTCCGTTCAT 59.763 37.037 0.00 0.00 0.00 2.57
4339 4697 6.555738 TCCATAAATATTACTCCCTCCGTTCA 59.444 38.462 0.00 0.00 0.00 3.18
4340 4698 7.001099 TCCATAAATATTACTCCCTCCGTTC 57.999 40.000 0.00 0.00 0.00 3.95
4341 4699 7.394816 CATCCATAAATATTACTCCCTCCGTT 58.605 38.462 0.00 0.00 0.00 4.44
4342 4700 6.576442 GCATCCATAAATATTACTCCCTCCGT 60.576 42.308 0.00 0.00 0.00 4.69
4343 4701 5.817816 GCATCCATAAATATTACTCCCTCCG 59.182 44.000 0.00 0.00 0.00 4.63
4344 4702 6.721318 TGCATCCATAAATATTACTCCCTCC 58.279 40.000 0.00 0.00 0.00 4.30
4345 4703 7.284034 CCATGCATCCATAAATATTACTCCCTC 59.716 40.741 0.00 0.00 0.00 4.30
4346 4704 7.121382 CCATGCATCCATAAATATTACTCCCT 58.879 38.462 0.00 0.00 0.00 4.20
4347 4705 6.891908 ACCATGCATCCATAAATATTACTCCC 59.108 38.462 0.00 0.00 0.00 4.30
4348 4706 7.611467 TCACCATGCATCCATAAATATTACTCC 59.389 37.037 0.00 0.00 0.00 3.85
4349 4707 8.565896 TCACCATGCATCCATAAATATTACTC 57.434 34.615 0.00 0.00 0.00 2.59
4350 4708 9.537852 AATCACCATGCATCCATAAATATTACT 57.462 29.630 0.00 0.00 0.00 2.24
4739 5498 6.459670 TTACCTTTCAAGTGAAAAAGACCC 57.540 37.500 7.80 0.00 42.72 4.46
4766 5526 0.798776 GACTGATGGAAACTGTGCCG 59.201 55.000 0.00 0.00 0.00 5.69
4768 5528 1.195448 CACGACTGATGGAAACTGTGC 59.805 52.381 0.00 0.00 0.00 4.57
5026 5794 6.966066 GCAAAGATTTCTCTTGCACTTCTATC 59.034 38.462 15.97 0.00 40.93 2.08
5245 6307 3.168773 GCAAATCGGCCAGTCCTTA 57.831 52.632 2.24 0.00 0.00 2.69
5294 6381 2.570302 TGTTACCTCCAGCTAAAGTCCC 59.430 50.000 0.00 0.00 0.00 4.46
5369 6456 7.504924 TCTTCAAAGGTATAACAACCACAAG 57.495 36.000 0.00 0.00 42.40 3.16
5394 6481 5.700832 CCTCTGTTAAATGCACAAGTACTGA 59.299 40.000 0.00 0.00 0.00 3.41
5434 6522 6.129874 TCAGAGCTAGGAGTACAACATATGT 58.870 40.000 1.41 1.41 46.36 2.29
5466 6560 2.766313 TCGGACATGAACACCTCAAAG 58.234 47.619 0.00 0.00 37.67 2.77
5572 6712 1.481871 ATGCCTGAAGCCCTTGATTG 58.518 50.000 0.00 0.00 42.71 2.67
5653 6795 3.895232 ATAGTAGTCTGCACAGTTGGG 57.105 47.619 0.00 0.00 0.00 4.12
5750 6892 7.453126 ACTCTGATGTTCTATAGTAATCCCTGG 59.547 40.741 0.00 0.00 0.00 4.45
5751 6893 8.415950 ACTCTGATGTTCTATAGTAATCCCTG 57.584 38.462 0.00 0.00 0.00 4.45
5752 6894 9.747898 CTACTCTGATGTTCTATAGTAATCCCT 57.252 37.037 0.00 0.00 0.00 4.20
5753 6895 9.523168 ACTACTCTGATGTTCTATAGTAATCCC 57.477 37.037 0.00 0.00 0.00 3.85
5826 6971 7.871463 GTCAGCCGGTCTACTTATTAATTATGT 59.129 37.037 1.90 0.00 0.00 2.29
5837 8410 1.557099 TCATGTCAGCCGGTCTACTT 58.443 50.000 1.90 0.00 0.00 2.24
5839 8412 1.409064 TCATCATGTCAGCCGGTCTAC 59.591 52.381 1.90 0.00 0.00 2.59
5844 8417 0.463295 AGCTTCATCATGTCAGCCGG 60.463 55.000 0.00 0.00 32.25 6.13
5847 8420 4.497674 GGATTTGAGCTTCATCATGTCAGC 60.498 45.833 3.98 3.98 0.00 4.26
5887 8513 1.149401 GCTCTGGGGTAGGCAATCC 59.851 63.158 0.00 0.00 0.00 3.01
5891 8517 1.133809 AAACAGCTCTGGGGTAGGCA 61.134 55.000 1.66 0.00 34.19 4.75
5897 8523 0.962356 ATCGCAAAACAGCTCTGGGG 60.962 55.000 1.66 0.00 34.19 4.96
5900 8526 3.681897 AGTCTAATCGCAAAACAGCTCTG 59.318 43.478 0.00 0.00 0.00 3.35
5913 8539 5.904630 CGTCAGTACTGATTGAGTCTAATCG 59.095 44.000 27.54 17.13 42.18 3.34
5914 8540 6.689241 CACGTCAGTACTGATTGAGTCTAATC 59.311 42.308 27.54 9.81 42.18 1.75
5915 8541 6.374613 TCACGTCAGTACTGATTGAGTCTAAT 59.625 38.462 27.54 4.45 42.18 1.73
5916 8542 5.704053 TCACGTCAGTACTGATTGAGTCTAA 59.296 40.000 27.54 8.95 42.18 2.10
5917 8543 5.243207 TCACGTCAGTACTGATTGAGTCTA 58.757 41.667 27.54 12.72 42.18 2.59
5918 8544 4.072839 TCACGTCAGTACTGATTGAGTCT 58.927 43.478 27.54 6.07 42.18 3.24
5919 8545 4.407818 CTCACGTCAGTACTGATTGAGTC 58.592 47.826 34.01 21.06 42.07 3.36
5920 8546 3.366476 GCTCACGTCAGTACTGATTGAGT 60.366 47.826 37.33 28.05 45.14 3.41
5921 8547 3.175152 GCTCACGTCAGTACTGATTGAG 58.825 50.000 35.87 35.87 45.59 3.02
5922 8548 2.094700 GGCTCACGTCAGTACTGATTGA 60.095 50.000 27.54 26.89 42.18 2.57
5923 8549 2.263077 GGCTCACGTCAGTACTGATTG 58.737 52.381 27.54 24.66 42.18 2.67
5924 8550 1.204941 GGGCTCACGTCAGTACTGATT 59.795 52.381 27.54 15.43 42.18 2.57
5925 8551 0.818296 GGGCTCACGTCAGTACTGAT 59.182 55.000 27.54 10.98 42.18 2.90
5926 8552 0.251209 AGGGCTCACGTCAGTACTGA 60.251 55.000 21.74 21.74 37.24 3.41
5927 8553 0.109086 CAGGGCTCACGTCAGTACTG 60.109 60.000 17.17 17.17 0.00 2.74
5928 8554 0.539901 ACAGGGCTCACGTCAGTACT 60.540 55.000 0.00 0.00 0.00 2.73
5929 8555 0.317479 AACAGGGCTCACGTCAGTAC 59.683 55.000 0.00 0.00 0.00 2.73
5930 8556 1.000506 GAAACAGGGCTCACGTCAGTA 59.999 52.381 0.00 0.00 0.00 2.74
5931 8557 0.249911 GAAACAGGGCTCACGTCAGT 60.250 55.000 0.00 0.00 0.00 3.41
5932 8558 0.034059 AGAAACAGGGCTCACGTCAG 59.966 55.000 0.00 0.00 0.00 3.51
5961 8587 1.064060 GCTTGCCGTGATGGTAATGTC 59.936 52.381 0.00 0.00 41.87 3.06
5965 8591 1.743623 CGGCTTGCCGTGATGGTAA 60.744 57.895 24.03 0.00 40.37 2.85
6015 8641 7.057149 TGCCGAATTCGTTTTTGTTTAAAAA 57.943 28.000 25.10 0.00 37.46 1.94
6016 8642 6.642683 TGCCGAATTCGTTTTTGTTTAAAA 57.357 29.167 25.10 0.00 37.74 1.52
6017 8643 6.642683 TTGCCGAATTCGTTTTTGTTTAAA 57.357 29.167 25.10 3.22 37.74 1.52
6018 8644 6.310711 ACTTTGCCGAATTCGTTTTTGTTTAA 59.689 30.769 25.10 6.45 37.74 1.52
6019 8645 5.805994 ACTTTGCCGAATTCGTTTTTGTTTA 59.194 32.000 25.10 1.67 37.74 2.01
6020 8646 4.627900 ACTTTGCCGAATTCGTTTTTGTTT 59.372 33.333 25.10 1.20 37.74 2.83
6021 8647 4.177783 ACTTTGCCGAATTCGTTTTTGTT 58.822 34.783 25.10 2.51 37.74 2.83
6022 8648 3.776340 ACTTTGCCGAATTCGTTTTTGT 58.224 36.364 25.10 15.11 37.74 2.83
6023 8649 4.602957 CGAACTTTGCCGAATTCGTTTTTG 60.603 41.667 25.10 14.53 39.21 2.44
6024 8650 3.484285 CGAACTTTGCCGAATTCGTTTTT 59.516 39.130 25.10 9.94 39.21 1.94
6025 8651 3.040099 CGAACTTTGCCGAATTCGTTTT 58.960 40.909 25.10 9.29 39.21 2.43
6026 8652 2.603652 CCGAACTTTGCCGAATTCGTTT 60.604 45.455 25.10 8.96 41.77 3.60
6027 8653 1.069500 CCGAACTTTGCCGAATTCGTT 60.069 47.619 25.10 12.42 41.77 3.85
6028 8654 0.515564 CCGAACTTTGCCGAATTCGT 59.484 50.000 25.10 5.84 41.77 3.85
6029 8655 0.793104 GCCGAACTTTGCCGAATTCG 60.793 55.000 20.92 20.92 42.71 3.34
6030 8656 0.239879 TGCCGAACTTTGCCGAATTC 59.760 50.000 0.00 0.00 0.00 2.17
6031 8657 0.671251 TTGCCGAACTTTGCCGAATT 59.329 45.000 0.00 0.00 0.00 2.17
6032 8658 0.671251 TTTGCCGAACTTTGCCGAAT 59.329 45.000 0.00 0.00 0.00 3.34
6033 8659 0.671251 ATTTGCCGAACTTTGCCGAA 59.329 45.000 0.00 0.00 0.00 4.30
6034 8660 0.671251 AATTTGCCGAACTTTGCCGA 59.329 45.000 0.00 0.00 0.00 5.54
6035 8661 0.783579 CAATTTGCCGAACTTTGCCG 59.216 50.000 0.00 0.00 0.00 5.69
6036 8662 1.147473 CCAATTTGCCGAACTTTGCC 58.853 50.000 0.00 0.00 0.00 4.52
6037 8663 1.792367 GTCCAATTTGCCGAACTTTGC 59.208 47.619 0.00 0.00 0.00 3.68
6038 8664 3.090952 TGTCCAATTTGCCGAACTTTG 57.909 42.857 0.00 0.00 0.00 2.77
6039 8665 3.810310 TTGTCCAATTTGCCGAACTTT 57.190 38.095 0.00 0.00 0.00 2.66
6040 8666 3.810310 TTTGTCCAATTTGCCGAACTT 57.190 38.095 0.00 0.00 0.00 2.66
6041 8667 3.453424 GTTTTGTCCAATTTGCCGAACT 58.547 40.909 0.00 0.00 0.00 3.01
6042 8668 2.217620 CGTTTTGTCCAATTTGCCGAAC 59.782 45.455 0.00 0.00 0.00 3.95
6043 8669 2.159226 ACGTTTTGTCCAATTTGCCGAA 60.159 40.909 0.00 0.00 0.00 4.30
6044 8670 1.405821 ACGTTTTGTCCAATTTGCCGA 59.594 42.857 0.00 0.00 0.00 5.54
6045 8671 1.846541 ACGTTTTGTCCAATTTGCCG 58.153 45.000 0.00 0.00 0.00 5.69
6046 8672 4.318475 GCTAAACGTTTTGTCCAATTTGCC 60.318 41.667 20.19 0.00 0.00 4.52
6047 8673 4.506288 AGCTAAACGTTTTGTCCAATTTGC 59.494 37.500 20.19 4.05 0.00 3.68
6048 8674 5.746245 TCAGCTAAACGTTTTGTCCAATTTG 59.254 36.000 20.19 7.53 0.00 2.32
6049 8675 5.897050 TCAGCTAAACGTTTTGTCCAATTT 58.103 33.333 20.19 0.00 0.00 1.82
6050 8676 5.508200 TCAGCTAAACGTTTTGTCCAATT 57.492 34.783 20.19 0.00 0.00 2.32
6051 8677 5.067283 ACTTCAGCTAAACGTTTTGTCCAAT 59.933 36.000 20.19 0.00 0.00 3.16
6052 8678 4.396790 ACTTCAGCTAAACGTTTTGTCCAA 59.603 37.500 20.19 9.70 0.00 3.53
6053 8679 3.942748 ACTTCAGCTAAACGTTTTGTCCA 59.057 39.130 20.19 0.00 0.00 4.02
6054 8680 4.547406 ACTTCAGCTAAACGTTTTGTCC 57.453 40.909 20.19 5.48 0.00 4.02
6055 8681 4.664851 CGAACTTCAGCTAAACGTTTTGTC 59.335 41.667 20.19 12.78 0.00 3.18
6056 8682 4.495184 CCGAACTTCAGCTAAACGTTTTGT 60.495 41.667 20.19 5.40 0.00 2.83
6057 8683 3.966218 CCGAACTTCAGCTAAACGTTTTG 59.034 43.478 20.19 18.19 0.00 2.44
6058 8684 3.547413 GCCGAACTTCAGCTAAACGTTTT 60.547 43.478 20.19 0.00 0.00 2.43
6059 8685 2.032290 GCCGAACTTCAGCTAAACGTTT 60.032 45.455 18.90 18.90 0.00 3.60
6060 8686 1.529865 GCCGAACTTCAGCTAAACGTT 59.470 47.619 0.00 0.00 0.00 3.99
6061 8687 1.145803 GCCGAACTTCAGCTAAACGT 58.854 50.000 0.00 0.00 0.00 3.99
6062 8688 1.144969 TGCCGAACTTCAGCTAAACG 58.855 50.000 0.00 0.00 0.00 3.60
6063 8689 3.003378 AGTTTGCCGAACTTCAGCTAAAC 59.997 43.478 12.44 12.44 46.34 2.01
6064 8690 3.211045 AGTTTGCCGAACTTCAGCTAAA 58.789 40.909 0.00 0.00 46.34 1.85
6065 8691 2.846193 AGTTTGCCGAACTTCAGCTAA 58.154 42.857 0.00 0.00 46.34 3.09
6066 8692 2.543777 AGTTTGCCGAACTTCAGCTA 57.456 45.000 0.00 0.00 46.34 3.32
6067 8693 3.403936 AGTTTGCCGAACTTCAGCT 57.596 47.368 0.00 0.00 46.34 4.24
6074 8700 7.950496 GTCGAATATATATCAAGTTTGCCGAAC 59.050 37.037 0.00 0.00 38.58 3.95
6075 8701 7.654116 TGTCGAATATATATCAAGTTTGCCGAA 59.346 33.333 0.00 0.00 0.00 4.30
6076 8702 7.149307 TGTCGAATATATATCAAGTTTGCCGA 58.851 34.615 0.00 0.00 0.00 5.54
6077 8703 7.346208 TGTCGAATATATATCAAGTTTGCCG 57.654 36.000 0.00 0.00 0.00 5.69
6078 8704 8.721478 ACATGTCGAATATATATCAAGTTTGCC 58.279 33.333 0.00 0.00 0.00 4.52
6098 8724 8.112099 ACTTATTATGTAACGTCGAACATGTC 57.888 34.615 20.60 0.00 36.96 3.06
6099 8725 8.470040 AACTTATTATGTAACGTCGAACATGT 57.530 30.769 20.60 14.25 36.96 3.21
6129 8755 2.368311 TCGCCCCTTAGTTGGTTTTT 57.632 45.000 0.00 0.00 0.00 1.94
6130 8756 2.158579 TCTTCGCCCCTTAGTTGGTTTT 60.159 45.455 0.00 0.00 0.00 2.43
6131 8757 1.422402 TCTTCGCCCCTTAGTTGGTTT 59.578 47.619 0.00 0.00 0.00 3.27
6132 8758 1.061546 TCTTCGCCCCTTAGTTGGTT 58.938 50.000 0.00 0.00 0.00 3.67
6133 8759 1.003233 CTTCTTCGCCCCTTAGTTGGT 59.997 52.381 0.00 0.00 0.00 3.67
6134 8760 1.003233 ACTTCTTCGCCCCTTAGTTGG 59.997 52.381 0.00 0.00 0.00 3.77
6135 8761 2.347731 GACTTCTTCGCCCCTTAGTTG 58.652 52.381 0.00 0.00 0.00 3.16
6136 8762 1.067071 CGACTTCTTCGCCCCTTAGTT 60.067 52.381 0.00 0.00 41.87 2.24
6137 8763 0.531200 CGACTTCTTCGCCCCTTAGT 59.469 55.000 0.00 0.00 41.87 2.24
6138 8764 3.347411 CGACTTCTTCGCCCCTTAG 57.653 57.895 0.00 0.00 41.87 2.18
6175 8801 4.907034 CGACGACGAGGATGGCGG 62.907 72.222 0.00 0.00 42.66 6.13
6176 8802 4.175489 ACGACGACGAGGATGGCG 62.175 66.667 15.32 0.00 42.66 5.69
6177 8803 2.278013 GACGACGACGAGGATGGC 60.278 66.667 15.32 0.00 42.66 4.40
6178 8804 2.022902 CGACGACGACGAGGATGG 59.977 66.667 15.32 0.00 42.66 3.51
6179 8805 2.022902 CCGACGACGACGAGGATG 59.977 66.667 20.63 0.07 42.66 3.51
6180 8806 3.873883 GCCGACGACGACGAGGAT 61.874 66.667 20.63 0.00 42.66 3.24
6183 8809 3.996744 GAAGGCCGACGACGACGAG 62.997 68.421 20.63 11.66 42.66 4.18
6184 8810 4.093952 GAAGGCCGACGACGACGA 62.094 66.667 20.63 0.00 42.66 4.20
6185 8811 3.996744 GAGAAGGCCGACGACGACG 62.997 68.421 12.66 12.66 42.66 5.12
6186 8812 2.202453 GAGAAGGCCGACGACGAC 60.202 66.667 9.28 0.00 42.66 4.34
6187 8813 3.437795 GGAGAAGGCCGACGACGA 61.438 66.667 9.28 0.00 42.66 4.20
6188 8814 2.868999 GAAGGAGAAGGCCGACGACG 62.869 65.000 0.00 0.00 39.43 5.12
6189 8815 1.153804 GAAGGAGAAGGCCGACGAC 60.154 63.158 0.00 0.00 0.00 4.34
6190 8816 0.898789 AAGAAGGAGAAGGCCGACGA 60.899 55.000 0.00 0.00 0.00 4.20
6191 8817 0.737715 CAAGAAGGAGAAGGCCGACG 60.738 60.000 0.00 0.00 0.00 5.12
6192 8818 0.608640 TCAAGAAGGAGAAGGCCGAC 59.391 55.000 0.00 0.00 0.00 4.79
6193 8819 1.208052 CATCAAGAAGGAGAAGGCCGA 59.792 52.381 0.00 0.00 0.00 5.54
6194 8820 1.661341 CATCAAGAAGGAGAAGGCCG 58.339 55.000 0.00 0.00 0.00 6.13
6195 8821 1.387539 GCATCAAGAAGGAGAAGGCC 58.612 55.000 0.00 0.00 0.00 5.19
6196 8822 1.012841 CGCATCAAGAAGGAGAAGGC 58.987 55.000 0.00 0.00 0.00 4.35
6197 8823 1.661341 CCGCATCAAGAAGGAGAAGG 58.339 55.000 0.00 0.00 0.00 3.46
6198 8824 1.012841 GCCGCATCAAGAAGGAGAAG 58.987 55.000 0.00 0.00 0.00 2.85
6199 8825 0.392998 GGCCGCATCAAGAAGGAGAA 60.393 55.000 0.00 0.00 0.00 2.87
6200 8826 1.221840 GGCCGCATCAAGAAGGAGA 59.778 57.895 0.00 0.00 0.00 3.71
6201 8827 1.078214 TGGCCGCATCAAGAAGGAG 60.078 57.895 0.00 0.00 0.00 3.69
6202 8828 1.377202 GTGGCCGCATCAAGAAGGA 60.377 57.895 12.58 0.00 0.00 3.36
6203 8829 2.409870 GGTGGCCGCATCAAGAAGG 61.410 63.158 19.98 0.00 0.00 3.46
6204 8830 2.409870 GGGTGGCCGCATCAAGAAG 61.410 63.158 19.98 0.00 0.00 2.85
6205 8831 2.361104 GGGTGGCCGCATCAAGAA 60.361 61.111 19.98 0.00 0.00 2.52
6206 8832 4.424711 GGGGTGGCCGCATCAAGA 62.425 66.667 19.98 0.00 36.42 3.02
6207 8833 4.431131 AGGGGTGGCCGCATCAAG 62.431 66.667 19.98 0.00 39.05 3.02
6208 8834 4.738998 CAGGGGTGGCCGCATCAA 62.739 66.667 19.98 0.00 39.05 2.57
6218 8844 2.693864 AGGGATCCAGCAGGGGTG 60.694 66.667 15.23 0.00 37.22 4.61
6219 8845 2.693864 CAGGGATCCAGCAGGGGT 60.694 66.667 15.23 0.00 37.22 4.95
6220 8846 4.201122 GCAGGGATCCAGCAGGGG 62.201 72.222 20.05 0.86 36.03 4.79
6221 8847 4.201122 GGCAGGGATCCAGCAGGG 62.201 72.222 24.46 5.26 37.79 4.45
6222 8848 4.201122 GGGCAGGGATCCAGCAGG 62.201 72.222 24.46 6.83 37.79 4.85
6223 8849 4.559063 CGGGCAGGGATCCAGCAG 62.559 72.222 24.46 16.04 37.79 4.24
6225 8851 4.554036 GACGGGCAGGGATCCAGC 62.554 72.222 15.23 16.58 35.20 4.85
6226 8852 4.227134 CGACGGGCAGGGATCCAG 62.227 72.222 15.23 6.58 0.00 3.86
6228 8854 4.222847 GACGACGGGCAGGGATCC 62.223 72.222 1.92 1.92 0.00 3.36
6229 8855 4.570663 CGACGACGGGCAGGGATC 62.571 72.222 0.00 0.00 35.72 3.36
6248 8874 4.717629 TTGTCCTCGGCGACAGCG 62.718 66.667 4.99 0.00 43.39 5.18
6249 8875 3.112709 GTTGTCCTCGGCGACAGC 61.113 66.667 4.99 1.27 43.39 4.40
6250 8876 2.805353 CGTTGTCCTCGGCGACAG 60.805 66.667 4.99 0.00 43.39 3.51
6251 8877 3.289062 TCGTTGTCCTCGGCGACA 61.289 61.111 4.99 0.00 40.98 4.35
6252 8878 2.804090 GTCGTTGTCCTCGGCGAC 60.804 66.667 4.99 0.00 44.93 5.19
6256 8882 3.966026 GAGGCGTCGTTGTCCTCGG 62.966 68.421 1.55 0.00 37.28 4.63
6257 8883 2.504244 GAGGCGTCGTTGTCCTCG 60.504 66.667 1.55 0.00 37.28 4.63
6258 8884 2.126031 GGAGGCGTCGTTGTCCTC 60.126 66.667 7.81 7.81 44.28 3.71
6259 8885 3.692406 GGGAGGCGTCGTTGTCCT 61.692 66.667 0.00 0.04 0.00 3.85
6260 8886 3.644399 GAGGGAGGCGTCGTTGTCC 62.644 68.421 0.00 0.00 0.00 4.02
6261 8887 2.126031 GAGGGAGGCGTCGTTGTC 60.126 66.667 0.00 0.00 0.00 3.18
6262 8888 4.052229 CGAGGGAGGCGTCGTTGT 62.052 66.667 0.00 0.00 0.00 3.32
6290 8916 3.179939 GGTTCGAAGCTCGGCGTC 61.180 66.667 19.71 0.00 40.88 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.