Multiple sequence alignment - TraesCS6D01G292500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G292500 chr6D 100.000 5398 0 0 1 5398 403068005 403062608 0.000000e+00 9969.0
1 TraesCS6D01G292500 chr6D 83.026 271 29 8 3558 3827 299894448 299894702 4.210000e-56 230.0
2 TraesCS6D01G292500 chr6D 91.525 59 5 0 4944 5002 403062693 403062635 1.250000e-11 82.4
3 TraesCS6D01G292500 chr6D 91.525 59 5 0 5313 5371 403063062 403063004 1.250000e-11 82.4
4 TraesCS6D01G292500 chr6A 96.047 2985 108 3 796 3776 549539956 549536978 0.000000e+00 4850.0
5 TraesCS6D01G292500 chr6A 94.795 365 18 1 376 740 549540319 549539956 7.850000e-158 568.0
6 TraesCS6D01G292500 chr6A 80.972 720 87 28 3320 4010 417635915 417635217 4.790000e-145 525.0
7 TraesCS6D01G292500 chr6A 96.813 251 7 1 4884 5134 549536340 549536091 8.360000e-113 418.0
8 TraesCS6D01G292500 chr6A 94.915 236 12 0 4181 4416 549536574 549536339 2.370000e-98 370.0
9 TraesCS6D01G292500 chr6A 91.321 265 12 6 3774 4028 549536818 549536555 8.600000e-93 351.0
10 TraesCS6D01G292500 chr6A 87.705 122 14 1 257 378 549541106 549540986 2.030000e-29 141.0
11 TraesCS6D01G292500 chr6A 92.647 68 5 0 1381 1448 549539437 549539370 1.240000e-16 99.0
12 TraesCS6D01G292500 chr6B 96.252 1254 38 1 500 1753 604110523 604109279 0.000000e+00 2047.0
13 TraesCS6D01G292500 chr6B 93.021 1218 80 5 1751 2964 604109156 604107940 0.000000e+00 1773.0
14 TraesCS6D01G292500 chr6B 82.950 1783 214 44 1318 3075 603912502 603910785 0.000000e+00 1526.0
15 TraesCS6D01G292500 chr6B 89.214 1094 60 13 4182 5251 604076688 604075629 0.000000e+00 1314.0
16 TraesCS6D01G292500 chr6B 82.008 1195 148 30 285 1443 603913867 603912704 0.000000e+00 953.0
17 TraesCS6D01G292500 chr6B 91.238 525 36 2 3004 3528 604077818 604077304 0.000000e+00 706.0
18 TraesCS6D01G292500 chr6B 82.895 456 55 13 3558 4010 464914224 464914659 6.560000e-104 388.0
19 TraesCS6D01G292500 chr6B 91.154 260 15 5 3776 4028 604076928 604076670 4.000000e-91 346.0
20 TraesCS6D01G292500 chr6B 95.673 208 9 0 3569 3776 604077295 604077088 8.660000e-88 335.0
21 TraesCS6D01G292500 chr6B 90.667 150 10 2 258 404 604111205 604111057 4.270000e-46 196.0
22 TraesCS6D01G292500 chr6B 88.750 160 13 3 4736 4895 683376074 683376228 1.980000e-44 191.0
23 TraesCS6D01G292500 chr6B 88.550 131 15 0 1318 1448 603912634 603912504 5.600000e-35 159.0
24 TraesCS6D01G292500 chr6B 88.060 134 16 0 1315 1448 603912703 603912570 5.600000e-35 159.0
25 TraesCS6D01G292500 chr6B 87.023 131 14 1 1318 1448 603912763 603912636 1.570000e-30 145.0
26 TraesCS6D01G292500 chr6B 92.857 70 5 0 1381 1450 604109717 604109648 9.570000e-18 102.0
27 TraesCS6D01G292500 chr6B 91.935 62 1 1 5311 5372 604075602 604075545 3.460000e-12 84.2
28 TraesCS6D01G292500 chr6B 84.746 59 5 1 4944 5002 604075600 604075546 7.550000e-04 56.5
29 TraesCS6D01G292500 chr4D 89.820 167 12 2 4736 4902 416761696 416761857 5.480000e-50 209.0
30 TraesCS6D01G292500 chr5B 89.441 161 12 2 4736 4895 318403052 318403208 1.190000e-46 198.0
31 TraesCS6D01G292500 chr5B 92.308 117 9 0 4028 4144 573003715 573003599 3.340000e-37 167.0
32 TraesCS6D01G292500 chr7D 89.308 159 13 3 4735 4893 168048607 168048761 4.270000e-46 196.0
33 TraesCS6D01G292500 chr7A 88.024 167 16 2 4736 4902 524701256 524701418 1.530000e-45 195.0
34 TraesCS6D01G292500 chr7A 87.500 168 15 5 4736 4901 487633702 487633539 7.140000e-44 189.0
35 TraesCS6D01G292500 chr2A 84.058 207 28 4 2539 2741 415264116 415263911 1.530000e-45 195.0
36 TraesCS6D01G292500 chr2A 86.207 145 14 5 4003 4143 161944601 161944743 9.360000e-33 152.0
37 TraesCS6D01G292500 chr5D 88.820 161 13 2 4736 4895 280785763 280785919 5.520000e-45 193.0
38 TraesCS6D01G292500 chr5D 86.441 177 18 4 4726 4901 150835739 150835568 7.140000e-44 189.0
39 TraesCS6D01G292500 chr5D 89.516 124 12 1 4020 4143 299073405 299073527 7.240000e-34 156.0
40 TraesCS6D01G292500 chr4B 89.873 158 4 3 4028 4173 107660460 107660303 5.520000e-45 193.0
41 TraesCS6D01G292500 chr7B 92.437 119 9 0 4026 4144 244640492 244640610 2.590000e-38 171.0
42 TraesCS6D01G292500 chr7B 84.496 129 8 5 4028 4144 380262572 380262444 3.420000e-22 117.0
43 TraesCS6D01G292500 chr4A 91.057 123 11 0 4022 4144 584667427 584667549 3.340000e-37 167.0
44 TraesCS6D01G292500 chr2B 92.241 116 9 0 4029 4144 316008030 316008145 1.200000e-36 165.0
45 TraesCS6D01G292500 chr3D 90.551 127 6 5 4019 4140 69500416 69500541 4.330000e-36 163.0
46 TraesCS6D01G292500 chr3D 80.861 209 36 2 2539 2744 38380738 38380531 1.560000e-35 161.0
47 TraesCS6D01G292500 chr3D 91.379 116 10 0 4028 4143 467283658 467283543 5.600000e-35 159.0
48 TraesCS6D01G292500 chr3D 93.182 44 3 0 1223 1266 317199904 317199947 1.250000e-06 65.8
49 TraesCS6D01G292500 chr3A 91.379 116 10 0 4028 4143 609951127 609951012 5.600000e-35 159.0
50 TraesCS6D01G292500 chr3A 82.906 117 6 7 4025 4128 224366445 224366330 5.760000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G292500 chr6D 403062608 403068005 5397 True 9969.000000 9969 100.000000 1 5398 1 chr6D.!!$R1 5397
1 TraesCS6D01G292500 chr6A 549536091 549541106 5015 True 971.000000 4850 93.463286 257 5134 7 chr6A.!!$R2 4877
2 TraesCS6D01G292500 chr6A 417635217 417635915 698 True 525.000000 525 80.972000 3320 4010 1 chr6A.!!$R1 690
3 TraesCS6D01G292500 chr6B 604107940 604111205 3265 True 1029.500000 2047 93.199250 258 2964 4 chr6B.!!$R3 2706
4 TraesCS6D01G292500 chr6B 603910785 603913867 3082 True 588.400000 1526 85.718200 285 3075 5 chr6B.!!$R1 2790
5 TraesCS6D01G292500 chr6B 604075545 604077818 2273 True 473.616667 1314 90.660000 3004 5372 6 chr6B.!!$R2 2368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
119 120 0.032540 GCTGAGTTGGGCCACTTTTG 59.967 55.0 5.23 0.00 0.0 2.44 F
224 225 0.175073 ATGAGAACGGGGTTAGACGC 59.825 55.0 0.00 0.00 0.0 5.19 F
233 234 0.527565 GGGTTAGACGCGGACAACTA 59.472 55.0 12.47 3.17 0.0 2.24 F
1771 3408 0.179032 TGCCAAGGAAGCGAAAGACA 60.179 50.0 0.00 0.00 0.0 3.41 F
3475 5140 0.673956 GCCAGGGAGAAAGTTCGGTC 60.674 60.0 0.00 0.00 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1586 3098 0.250858 TGACTCCACCTTGTGCATGG 60.251 55.000 0.00 0.00 34.58 3.66 R
1587 3099 0.877071 GTGACTCCACCTTGTGCATG 59.123 55.000 0.00 0.00 37.33 4.06 R
2012 3652 1.372623 AGCGTTTTCCGGACGACTC 60.373 57.895 17.44 8.13 42.82 3.36 R
3539 5204 0.106335 AGAAGCGCATGATCCCTCTG 59.894 55.000 11.47 0.00 0.00 3.35 R
5169 7047 0.108851 CGCCGGGCTTGCTTTTTAAT 60.109 50.000 18.34 0.00 0.00 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.885814 TTGGAGGCGACAAGGTCT 58.114 55.556 0.00 0.00 0.00 3.85
18 19 2.142220 TTGGAGGCGACAAGGTCTT 58.858 52.632 0.00 0.00 0.00 3.01
19 20 0.034896 TTGGAGGCGACAAGGTCTTC 59.965 55.000 0.00 0.00 0.00 2.87
20 21 1.118965 TGGAGGCGACAAGGTCTTCA 61.119 55.000 0.00 0.00 0.00 3.02
21 22 0.670854 GGAGGCGACAAGGTCTTCAC 60.671 60.000 0.00 0.00 0.00 3.18
22 23 0.670854 GAGGCGACAAGGTCTTCACC 60.671 60.000 0.00 0.00 44.19 4.02
31 32 3.553109 GGTCTTCACCTTAGCCACC 57.447 57.895 0.00 0.00 40.00 4.61
32 33 0.690762 GGTCTTCACCTTAGCCACCA 59.309 55.000 0.00 0.00 40.00 4.17
33 34 1.610886 GGTCTTCACCTTAGCCACCAC 60.611 57.143 0.00 0.00 40.00 4.16
34 35 0.690762 TCTTCACCTTAGCCACCACC 59.309 55.000 0.00 0.00 0.00 4.61
35 36 0.673644 CTTCACCTTAGCCACCACCG 60.674 60.000 0.00 0.00 0.00 4.94
36 37 1.412453 TTCACCTTAGCCACCACCGT 61.412 55.000 0.00 0.00 0.00 4.83
37 38 1.072505 CACCTTAGCCACCACCGTT 59.927 57.895 0.00 0.00 0.00 4.44
38 39 1.072505 ACCTTAGCCACCACCGTTG 59.927 57.895 0.00 0.00 0.00 4.10
39 40 1.072505 CCTTAGCCACCACCGTTGT 59.927 57.895 0.00 0.00 0.00 3.32
40 41 1.234615 CCTTAGCCACCACCGTTGTG 61.235 60.000 0.00 0.00 42.39 3.33
41 42 0.250124 CTTAGCCACCACCGTTGTGA 60.250 55.000 4.33 0.00 45.76 3.58
42 43 0.533308 TTAGCCACCACCGTTGTGAC 60.533 55.000 4.33 0.00 45.76 3.67
43 44 2.702751 TAGCCACCACCGTTGTGACG 62.703 60.000 4.33 0.00 45.76 4.35
51 52 4.742274 CGTTGTGACGGTGAAGGA 57.258 55.556 0.00 0.00 45.32 3.36
52 53 2.980562 CGTTGTGACGGTGAAGGAA 58.019 52.632 0.00 0.00 45.32 3.36
53 54 1.292061 CGTTGTGACGGTGAAGGAAA 58.708 50.000 0.00 0.00 45.32 3.13
54 55 1.666700 CGTTGTGACGGTGAAGGAAAA 59.333 47.619 0.00 0.00 45.32 2.29
55 56 2.538132 CGTTGTGACGGTGAAGGAAAAC 60.538 50.000 0.00 0.00 45.32 2.43
56 57 1.292061 TGTGACGGTGAAGGAAAACG 58.708 50.000 0.00 0.00 0.00 3.60
57 58 1.134759 TGTGACGGTGAAGGAAAACGA 60.135 47.619 0.00 0.00 0.00 3.85
58 59 1.525619 GTGACGGTGAAGGAAAACGAG 59.474 52.381 0.00 0.00 0.00 4.18
59 60 1.137479 TGACGGTGAAGGAAAACGAGT 59.863 47.619 0.00 0.00 0.00 4.18
60 61 2.207590 GACGGTGAAGGAAAACGAGTT 58.792 47.619 0.00 0.00 0.00 3.01
61 62 2.610833 GACGGTGAAGGAAAACGAGTTT 59.389 45.455 0.00 0.00 0.00 2.66
62 63 2.610833 ACGGTGAAGGAAAACGAGTTTC 59.389 45.455 1.39 7.52 44.31 2.78
63 64 2.348218 CGGTGAAGGAAAACGAGTTTCG 60.348 50.000 1.39 0.00 45.74 3.46
64 65 2.867975 GGTGAAGGAAAACGAGTTTCGA 59.132 45.455 5.38 0.00 45.74 3.71
65 66 3.310501 GGTGAAGGAAAACGAGTTTCGAA 59.689 43.478 5.38 0.00 45.74 3.71
66 67 4.024302 GGTGAAGGAAAACGAGTTTCGAAT 60.024 41.667 0.00 0.00 45.74 3.34
67 68 5.505159 GGTGAAGGAAAACGAGTTTCGAATT 60.505 40.000 0.00 0.00 45.74 2.17
68 69 5.620011 GTGAAGGAAAACGAGTTTCGAATTC 59.380 40.000 0.00 8.49 45.74 2.17
69 70 5.526111 TGAAGGAAAACGAGTTTCGAATTCT 59.474 36.000 0.00 0.38 45.74 2.40
70 71 6.702723 TGAAGGAAAACGAGTTTCGAATTCTA 59.297 34.615 0.00 0.00 45.74 2.10
71 72 6.707599 AGGAAAACGAGTTTCGAATTCTAG 57.292 37.500 0.00 4.23 45.74 2.43
72 73 6.221659 AGGAAAACGAGTTTCGAATTCTAGT 58.778 36.000 0.00 4.86 45.74 2.57
73 74 7.373493 AGGAAAACGAGTTTCGAATTCTAGTA 58.627 34.615 13.55 0.00 45.74 1.82
74 75 8.033626 AGGAAAACGAGTTTCGAATTCTAGTAT 58.966 33.333 13.55 8.46 45.74 2.12
75 76 8.108782 GGAAAACGAGTTTCGAATTCTAGTATG 58.891 37.037 13.55 0.00 45.74 2.39
76 77 8.530269 AAAACGAGTTTCGAATTCTAGTATGT 57.470 30.769 13.55 4.37 43.74 2.29
77 78 8.530269 AAACGAGTTTCGAATTCTAGTATGTT 57.470 30.769 13.55 0.00 43.74 2.71
78 79 8.530269 AACGAGTTTCGAATTCTAGTATGTTT 57.470 30.769 13.55 0.91 43.74 2.83
79 80 9.630098 AACGAGTTTCGAATTCTAGTATGTTTA 57.370 29.630 13.55 0.00 43.74 2.01
80 81 9.630098 ACGAGTTTCGAATTCTAGTATGTTTAA 57.370 29.630 0.00 0.00 43.74 1.52
105 106 9.606631 AAAAAGTAATAATCTGACTAGGCTGAG 57.393 33.333 11.20 0.00 0.00 3.35
106 107 7.906199 AAGTAATAATCTGACTAGGCTGAGT 57.094 36.000 11.20 10.80 0.00 3.41
107 108 7.906199 AGTAATAATCTGACTAGGCTGAGTT 57.094 36.000 10.85 7.96 0.00 3.01
108 109 7.721402 AGTAATAATCTGACTAGGCTGAGTTG 58.279 38.462 10.85 0.00 0.00 3.16
109 110 3.902881 AATCTGACTAGGCTGAGTTGG 57.097 47.619 11.20 0.00 0.00 3.77
110 111 1.561643 TCTGACTAGGCTGAGTTGGG 58.438 55.000 0.09 0.00 0.00 4.12
111 112 0.107945 CTGACTAGGCTGAGTTGGGC 60.108 60.000 0.00 0.00 0.00 5.36
116 117 2.116125 GGCTGAGTTGGGCCACTT 59.884 61.111 5.23 0.00 46.84 3.16
117 118 1.531602 GGCTGAGTTGGGCCACTTT 60.532 57.895 5.23 0.00 46.84 2.66
118 119 1.115326 GGCTGAGTTGGGCCACTTTT 61.115 55.000 5.23 0.00 46.84 2.27
119 120 0.032540 GCTGAGTTGGGCCACTTTTG 59.967 55.000 5.23 0.00 0.00 2.44
120 121 1.402787 CTGAGTTGGGCCACTTTTGT 58.597 50.000 5.23 0.00 0.00 2.83
121 122 1.756538 CTGAGTTGGGCCACTTTTGTT 59.243 47.619 5.23 0.00 0.00 2.83
122 123 2.168313 CTGAGTTGGGCCACTTTTGTTT 59.832 45.455 5.23 0.00 0.00 2.83
123 124 3.366396 TGAGTTGGGCCACTTTTGTTTA 58.634 40.909 5.23 0.00 0.00 2.01
124 125 3.769844 TGAGTTGGGCCACTTTTGTTTAA 59.230 39.130 5.23 0.00 0.00 1.52
125 126 4.407296 TGAGTTGGGCCACTTTTGTTTAAT 59.593 37.500 5.23 0.00 0.00 1.40
126 127 4.702831 AGTTGGGCCACTTTTGTTTAATG 58.297 39.130 5.23 0.00 0.00 1.90
127 128 4.407296 AGTTGGGCCACTTTTGTTTAATGA 59.593 37.500 5.23 0.00 0.00 2.57
128 129 5.104735 AGTTGGGCCACTTTTGTTTAATGAA 60.105 36.000 5.23 0.00 0.00 2.57
129 130 5.359194 TGGGCCACTTTTGTTTAATGAAA 57.641 34.783 0.00 0.00 0.00 2.69
130 131 5.745227 TGGGCCACTTTTGTTTAATGAAAA 58.255 33.333 0.00 0.00 0.00 2.29
131 132 6.360618 TGGGCCACTTTTGTTTAATGAAAAT 58.639 32.000 0.00 0.00 0.00 1.82
132 133 6.261826 TGGGCCACTTTTGTTTAATGAAAATG 59.738 34.615 0.00 0.00 0.00 2.32
133 134 6.262049 GGGCCACTTTTGTTTAATGAAAATGT 59.738 34.615 4.39 0.00 0.00 2.71
134 135 7.351981 GGCCACTTTTGTTTAATGAAAATGTC 58.648 34.615 0.00 0.00 0.00 3.06
135 136 7.011857 GGCCACTTTTGTTTAATGAAAATGTCA 59.988 33.333 0.00 0.00 41.67 3.58
136 137 8.394121 GCCACTTTTGTTTAATGAAAATGTCAA 58.606 29.630 0.00 0.00 40.50 3.18
161 162 8.619146 AAAAATGTAATGAATGTAGCATCGTG 57.381 30.769 0.00 0.00 0.00 4.35
162 163 6.925610 AATGTAATGAATGTAGCATCGTGT 57.074 33.333 0.00 0.00 0.00 4.49
163 164 8.432110 AAATGTAATGAATGTAGCATCGTGTA 57.568 30.769 0.00 0.00 0.00 2.90
164 165 7.643528 ATGTAATGAATGTAGCATCGTGTAG 57.356 36.000 0.00 0.00 0.00 2.74
165 166 6.801575 TGTAATGAATGTAGCATCGTGTAGA 58.198 36.000 0.00 0.00 0.00 2.59
166 167 7.433680 TGTAATGAATGTAGCATCGTGTAGAT 58.566 34.615 0.00 0.00 41.01 1.98
185 186 4.376340 GATGAAAATCATCCGGCTTGTT 57.624 40.909 8.79 0.00 45.66 2.83
186 187 4.747810 GATGAAAATCATCCGGCTTGTTT 58.252 39.130 8.79 0.00 45.66 2.83
187 188 5.890334 GATGAAAATCATCCGGCTTGTTTA 58.110 37.500 8.79 0.00 45.66 2.01
188 189 5.713792 TGAAAATCATCCGGCTTGTTTAA 57.286 34.783 0.00 0.00 0.00 1.52
189 190 6.090483 TGAAAATCATCCGGCTTGTTTAAA 57.910 33.333 0.00 0.00 0.00 1.52
190 191 6.696411 TGAAAATCATCCGGCTTGTTTAAAT 58.304 32.000 0.00 0.00 0.00 1.40
191 192 6.811170 TGAAAATCATCCGGCTTGTTTAAATC 59.189 34.615 0.00 0.37 0.00 2.17
192 193 4.918810 ATCATCCGGCTTGTTTAAATCC 57.081 40.909 0.00 0.00 0.00 3.01
193 194 3.020984 TCATCCGGCTTGTTTAAATCCC 58.979 45.455 0.00 0.00 0.00 3.85
194 195 2.588464 TCCGGCTTGTTTAAATCCCA 57.412 45.000 0.00 0.00 0.00 4.37
195 196 3.094484 TCCGGCTTGTTTAAATCCCAT 57.906 42.857 0.00 0.00 0.00 4.00
196 197 3.436243 TCCGGCTTGTTTAAATCCCATT 58.564 40.909 0.00 0.00 0.00 3.16
197 198 3.835395 TCCGGCTTGTTTAAATCCCATTT 59.165 39.130 0.00 0.00 36.29 2.32
198 199 3.932089 CCGGCTTGTTTAAATCCCATTTG 59.068 43.478 0.00 0.00 33.82 2.32
199 200 4.322349 CCGGCTTGTTTAAATCCCATTTGA 60.322 41.667 0.00 0.00 33.82 2.69
200 201 5.233988 CGGCTTGTTTAAATCCCATTTGAA 58.766 37.500 0.00 0.00 33.82 2.69
201 202 5.698545 CGGCTTGTTTAAATCCCATTTGAAA 59.301 36.000 0.00 0.00 30.92 2.69
202 203 6.371271 CGGCTTGTTTAAATCCCATTTGAAAT 59.629 34.615 0.00 0.00 30.92 2.17
203 204 7.529158 GGCTTGTTTAAATCCCATTTGAAATG 58.471 34.615 10.84 10.84 30.92 2.32
204 205 7.174772 GGCTTGTTTAAATCCCATTTGAAATGT 59.825 33.333 15.93 0.74 30.92 2.71
205 206 9.213799 GCTTGTTTAAATCCCATTTGAAATGTA 57.786 29.630 15.93 5.11 30.92 2.29
213 214 6.435430 TCCCATTTGAAATGTATGAGAACG 57.565 37.500 15.93 0.00 0.00 3.95
214 215 5.356751 TCCCATTTGAAATGTATGAGAACGG 59.643 40.000 15.93 7.29 0.00 4.44
215 216 5.450412 CCCATTTGAAATGTATGAGAACGGG 60.450 44.000 15.93 3.14 0.00 5.28
216 217 5.450412 CCATTTGAAATGTATGAGAACGGGG 60.450 44.000 15.93 0.00 0.00 5.73
217 218 3.992943 TGAAATGTATGAGAACGGGGT 57.007 42.857 0.00 0.00 0.00 4.95
218 219 4.295141 TGAAATGTATGAGAACGGGGTT 57.705 40.909 0.00 0.00 0.00 4.11
219 220 5.423704 TGAAATGTATGAGAACGGGGTTA 57.576 39.130 0.00 0.00 0.00 2.85
220 221 5.424757 TGAAATGTATGAGAACGGGGTTAG 58.575 41.667 0.00 0.00 0.00 2.34
221 222 5.188163 TGAAATGTATGAGAACGGGGTTAGA 59.812 40.000 0.00 0.00 0.00 2.10
222 223 4.667519 ATGTATGAGAACGGGGTTAGAC 57.332 45.455 0.00 0.00 0.00 2.59
223 224 2.424601 TGTATGAGAACGGGGTTAGACG 59.575 50.000 0.00 0.00 0.00 4.18
224 225 0.175073 ATGAGAACGGGGTTAGACGC 59.825 55.000 0.00 0.00 0.00 5.19
229 230 3.751246 CGGGGTTAGACGCGGACA 61.751 66.667 12.47 0.00 42.24 4.02
230 231 2.658422 GGGGTTAGACGCGGACAA 59.342 61.111 12.47 0.00 31.02 3.18
231 232 1.739196 GGGGTTAGACGCGGACAAC 60.739 63.158 12.47 10.68 31.02 3.32
232 233 1.291272 GGGTTAGACGCGGACAACT 59.709 57.895 12.47 4.19 0.00 3.16
233 234 0.527565 GGGTTAGACGCGGACAACTA 59.472 55.000 12.47 3.17 0.00 2.24
234 235 1.622232 GGTTAGACGCGGACAACTAC 58.378 55.000 12.47 0.00 0.00 2.73
235 236 1.068333 GGTTAGACGCGGACAACTACA 60.068 52.381 12.47 0.00 0.00 2.74
236 237 2.248487 GTTAGACGCGGACAACTACAG 58.752 52.381 12.47 0.00 0.00 2.74
237 238 0.806868 TAGACGCGGACAACTACAGG 59.193 55.000 12.47 0.00 0.00 4.00
238 239 1.177256 AGACGCGGACAACTACAGGT 61.177 55.000 12.47 0.00 0.00 4.00
239 240 1.006571 ACGCGGACAACTACAGGTG 60.007 57.895 12.47 0.00 0.00 4.00
240 241 1.006571 CGCGGACAACTACAGGTGT 60.007 57.895 0.00 0.00 0.00 4.16
241 242 0.599204 CGCGGACAACTACAGGTGTT 60.599 55.000 0.65 0.00 0.00 3.32
243 244 1.539496 GCGGACAACTACAGGTGTTGA 60.539 52.381 12.64 0.00 45.27 3.18
244 245 2.828877 CGGACAACTACAGGTGTTGAA 58.171 47.619 12.64 0.00 45.27 2.69
245 246 3.199677 CGGACAACTACAGGTGTTGAAA 58.800 45.455 12.64 0.00 45.27 2.69
246 247 3.623960 CGGACAACTACAGGTGTTGAAAA 59.376 43.478 12.64 0.00 45.27 2.29
247 248 4.274950 CGGACAACTACAGGTGTTGAAAAT 59.725 41.667 12.64 0.00 45.27 1.82
248 249 5.467399 CGGACAACTACAGGTGTTGAAAATA 59.533 40.000 12.64 0.00 45.27 1.40
249 250 6.148811 CGGACAACTACAGGTGTTGAAAATAT 59.851 38.462 12.64 0.00 45.27 1.28
250 251 7.527457 GGACAACTACAGGTGTTGAAAATATC 58.473 38.462 12.64 0.35 45.27 1.63
251 252 7.129109 ACAACTACAGGTGTTGAAAATATCG 57.871 36.000 12.64 0.00 45.27 2.92
252 253 6.932400 ACAACTACAGGTGTTGAAAATATCGA 59.068 34.615 12.64 0.00 45.27 3.59
253 254 7.117812 ACAACTACAGGTGTTGAAAATATCGAG 59.882 37.037 12.64 0.00 45.27 4.04
254 255 6.106673 ACTACAGGTGTTGAAAATATCGAGG 58.893 40.000 0.00 0.00 0.00 4.63
255 256 4.261801 ACAGGTGTTGAAAATATCGAGGG 58.738 43.478 0.00 0.00 0.00 4.30
256 257 3.627577 CAGGTGTTGAAAATATCGAGGGG 59.372 47.826 0.00 0.00 0.00 4.79
257 258 3.265995 AGGTGTTGAAAATATCGAGGGGT 59.734 43.478 0.00 0.00 0.00 4.95
258 259 4.472108 AGGTGTTGAAAATATCGAGGGGTA 59.528 41.667 0.00 0.00 0.00 3.69
259 260 5.045432 AGGTGTTGAAAATATCGAGGGGTAA 60.045 40.000 0.00 0.00 0.00 2.85
260 261 5.648960 GGTGTTGAAAATATCGAGGGGTAAA 59.351 40.000 0.00 0.00 0.00 2.01
261 262 6.151480 GGTGTTGAAAATATCGAGGGGTAAAA 59.849 38.462 0.00 0.00 0.00 1.52
262 263 7.248437 GTGTTGAAAATATCGAGGGGTAAAAG 58.752 38.462 0.00 0.00 0.00 2.27
404 1092 3.094572 CAATGCATCCTCCACCTTCTTT 58.905 45.455 0.00 0.00 0.00 2.52
422 1592 1.182667 TTCTCGCAATCTCTTCCCGA 58.817 50.000 0.00 0.00 0.00 5.14
428 1598 0.813210 CAATCTCTTCCCGAGGCTGC 60.813 60.000 0.00 0.00 40.30 5.25
596 1769 2.285668 CCTTCTCCTCCTGCCCCA 60.286 66.667 0.00 0.00 0.00 4.96
1042 2218 2.500098 ACATTTCTACTCTGGCGCCTTA 59.500 45.455 29.70 14.72 0.00 2.69
1080 2256 0.693767 AGCTGAGGAAGGGGATGAGG 60.694 60.000 0.00 0.00 0.00 3.86
1215 2391 1.684450 GGAAACAACCACCGGTCAAAT 59.316 47.619 2.59 0.00 33.12 2.32
1348 2728 1.066152 CTCTAGCTGCGCAGTATCACA 59.934 52.381 35.80 15.83 0.00 3.58
1365 2745 3.815809 TCACAACGAAATGAGGAACCTT 58.184 40.909 0.00 0.00 0.00 3.50
1406 2786 1.554160 ACTTGATGCTCTAGCTGCACT 59.446 47.619 11.44 3.37 43.59 4.40
1586 3098 1.939255 GCTAGCAGAGTTGAAGGATGC 59.061 52.381 10.63 0.00 37.15 3.91
1587 3099 2.559440 CTAGCAGAGTTGAAGGATGCC 58.441 52.381 0.00 0.00 37.61 4.40
1595 3107 1.273048 GTTGAAGGATGCCATGCACAA 59.727 47.619 0.00 2.12 43.04 3.33
1771 3408 0.179032 TGCCAAGGAAGCGAAAGACA 60.179 50.000 0.00 0.00 0.00 3.41
1794 3431 2.576191 TGAATTGGAGAGGGTTCGGAAT 59.424 45.455 0.00 0.00 0.00 3.01
1843 3480 2.305009 GGCATTTGGAAGAGGAGATGG 58.695 52.381 0.00 0.00 0.00 3.51
2169 3809 9.049523 TGTGATAATTCTGCTTTATGTCTCATC 57.950 33.333 0.00 0.00 0.00 2.92
2170 3810 9.049523 GTGATAATTCTGCTTTATGTCTCATCA 57.950 33.333 0.00 0.00 0.00 3.07
2176 3816 6.647229 TCTGCTTTATGTCTCATCAAGTCAT 58.353 36.000 5.84 0.00 37.49 3.06
2265 3911 4.450976 GAATGGACATGCACACATAGGTA 58.549 43.478 0.00 0.00 33.67 3.08
2369 4015 5.466728 TGATTCCTCTGTTCTTTGTTCGAAG 59.533 40.000 0.00 0.00 0.00 3.79
2391 4037 1.677217 GGGAAGCTCGAATTGCAGACT 60.677 52.381 0.00 0.00 0.00 3.24
2471 4117 3.507411 AGTCTCCCTGCTACTTGTGTAA 58.493 45.455 0.00 0.00 0.00 2.41
2475 4121 4.286032 TCTCCCTGCTACTTGTGTAAACAT 59.714 41.667 0.00 0.00 0.00 2.71
2500 4146 8.942338 TTTACATCTTGTTATAGACTCGCAAT 57.058 30.769 0.00 0.00 0.00 3.56
2508 4154 6.345298 TGTTATAGACTCGCAATCATTTCCA 58.655 36.000 0.00 0.00 0.00 3.53
2510 4156 7.498900 TGTTATAGACTCGCAATCATTTCCATT 59.501 33.333 0.00 0.00 0.00 3.16
2511 4157 4.627611 AGACTCGCAATCATTTCCATTG 57.372 40.909 0.00 0.00 34.80 2.82
2630 4277 3.286751 TGGTGACAAAGGCGCTGC 61.287 61.111 7.64 0.00 37.44 5.25
2667 4314 3.164269 CCCCAGTGGCCGCTATCT 61.164 66.667 20.73 0.00 0.00 1.98
2668 4315 2.109799 CCCAGTGGCCGCTATCTG 59.890 66.667 20.73 7.46 0.00 2.90
2905 4552 5.764686 ACTTGTTCTTACAGATCATGCAACA 59.235 36.000 0.00 0.00 35.28 3.33
2914 4561 6.822667 ACAGATCATGCAACAAGATTAACA 57.177 33.333 0.00 0.00 0.00 2.41
3079 4738 8.850156 CATTGGAAATCTTGTATAAAGGGGTAG 58.150 37.037 0.00 0.00 0.00 3.18
3475 5140 0.673956 GCCAGGGAGAAAGTTCGGTC 60.674 60.000 0.00 0.00 0.00 4.79
3490 5155 4.166144 AGTTCGGTCAAAAGGATGGGATAT 59.834 41.667 0.00 0.00 0.00 1.63
3491 5156 4.085357 TCGGTCAAAAGGATGGGATATG 57.915 45.455 0.00 0.00 0.00 1.78
3528 5193 4.111916 CAACAACACAAAATGAGTGGGAC 58.888 43.478 0.00 0.00 41.21 4.46
3529 5194 3.631250 ACAACACAAAATGAGTGGGACT 58.369 40.909 0.00 0.00 41.21 3.85
3530 5195 3.381272 ACAACACAAAATGAGTGGGACTG 59.619 43.478 0.00 0.00 41.21 3.51
3531 5196 2.586425 ACACAAAATGAGTGGGACTGG 58.414 47.619 0.00 0.00 41.21 4.00
3532 5197 1.888512 CACAAAATGAGTGGGACTGGG 59.111 52.381 0.00 0.00 33.43 4.45
3533 5198 1.203050 ACAAAATGAGTGGGACTGGGG 60.203 52.381 0.00 0.00 0.00 4.96
3539 5204 1.536662 AGTGGGACTGGGGAGACAC 60.537 63.158 0.00 0.00 0.00 3.67
3540 5205 1.841556 GTGGGACTGGGGAGACACA 60.842 63.158 0.00 0.00 45.84 3.72
3552 5217 1.202627 GGAGACACAGAGGGATCATGC 60.203 57.143 0.00 0.00 0.00 4.06
3710 5404 3.851098 CCTACCTCGAACCTTTTCAGAG 58.149 50.000 0.00 0.00 34.68 3.35
3751 5445 9.774742 CAGGTATTTTAGCTCATGTCTTTTAAC 57.225 33.333 0.00 0.00 33.57 2.01
3808 5665 0.250124 TCGACTTGGTTGCCGACAAT 60.250 50.000 0.00 0.00 38.27 2.71
3811 5668 2.695359 GACTTGGTTGCCGACAATAGA 58.305 47.619 0.00 0.00 38.27 1.98
3976 5839 5.841957 AGTAATTCAACCATGCTTGGATC 57.158 39.130 24.48 0.72 46.92 3.36
4010 5873 4.929211 CACATTCACAAGAACCGTCAGATA 59.071 41.667 0.00 0.00 36.39 1.98
4011 5874 5.582269 CACATTCACAAGAACCGTCAGATAT 59.418 40.000 0.00 0.00 36.39 1.63
4013 5876 5.400066 TTCACAAGAACCGTCAGATATCA 57.600 39.130 5.32 0.00 0.00 2.15
4014 5877 5.400066 TCACAAGAACCGTCAGATATCAA 57.600 39.130 5.32 0.00 0.00 2.57
4015 5878 5.977635 TCACAAGAACCGTCAGATATCAAT 58.022 37.500 5.32 0.00 0.00 2.57
4016 5879 7.107639 TCACAAGAACCGTCAGATATCAATA 57.892 36.000 5.32 0.00 0.00 1.90
4017 5880 7.726216 TCACAAGAACCGTCAGATATCAATAT 58.274 34.615 5.32 0.00 0.00 1.28
4018 5881 8.856103 TCACAAGAACCGTCAGATATCAATATA 58.144 33.333 5.32 0.00 0.00 0.86
4019 5882 9.645059 CACAAGAACCGTCAGATATCAATATAT 57.355 33.333 5.32 0.00 0.00 0.86
4038 5901 9.423061 CAATATATTTGTAATAAAAGGGCAGCC 57.577 33.333 1.26 1.26 0.00 4.85
4039 5902 4.753516 ATTTGTAATAAAAGGGCAGCCC 57.246 40.909 24.90 24.90 45.90 5.19
4049 5912 4.794648 GGCAGCCCGGTGCATGTA 62.795 66.667 19.47 0.00 45.93 2.29
4050 5913 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
4051 5914 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
4052 5915 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
4053 5916 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
4067 5930 4.704833 GCTCCTGCTTGCACGGGA 62.705 66.667 4.88 4.88 43.03 5.14
4068 5931 2.270205 CTCCTGCTTGCACGGGAT 59.730 61.111 5.39 0.00 44.21 3.85
4069 5932 1.817099 CTCCTGCTTGCACGGGATC 60.817 63.158 5.39 0.00 44.21 3.36
4070 5933 2.825836 CCTGCTTGCACGGGATCC 60.826 66.667 1.92 1.92 38.48 3.36
4082 5945 3.403936 GGGATCCGATCACTTTGGG 57.596 57.895 5.45 0.00 0.00 4.12
4083 5946 0.546598 GGGATCCGATCACTTTGGGT 59.453 55.000 5.45 0.00 0.00 4.51
4084 5947 1.475213 GGGATCCGATCACTTTGGGTC 60.475 57.143 5.45 0.00 38.21 4.46
4085 5948 1.486726 GGATCCGATCACTTTGGGTCT 59.513 52.381 10.56 0.00 38.88 3.85
4086 5949 2.698797 GGATCCGATCACTTTGGGTCTA 59.301 50.000 10.56 0.00 38.88 2.59
4087 5950 3.325135 GGATCCGATCACTTTGGGTCTAT 59.675 47.826 10.56 0.00 38.88 1.98
4088 5951 4.527038 GGATCCGATCACTTTGGGTCTATA 59.473 45.833 10.56 0.00 38.88 1.31
4089 5952 5.336849 GGATCCGATCACTTTGGGTCTATAG 60.337 48.000 10.56 0.00 38.88 1.31
4090 5953 4.543689 TCCGATCACTTTGGGTCTATAGT 58.456 43.478 0.00 0.00 0.00 2.12
4091 5954 5.698104 TCCGATCACTTTGGGTCTATAGTA 58.302 41.667 0.00 0.00 0.00 1.82
4092 5955 5.533903 TCCGATCACTTTGGGTCTATAGTAC 59.466 44.000 0.00 0.00 0.00 2.73
4093 5956 5.450171 CGATCACTTTGGGTCTATAGTACG 58.550 45.833 0.00 0.00 0.00 3.67
4094 5957 4.644103 TCACTTTGGGTCTATAGTACGC 57.356 45.455 0.00 6.13 0.00 4.42
4095 5958 4.018490 TCACTTTGGGTCTATAGTACGCA 58.982 43.478 13.98 13.98 37.94 5.24
4096 5959 4.097437 TCACTTTGGGTCTATAGTACGCAG 59.903 45.833 16.00 11.29 40.36 5.18
4097 5960 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
4098 5961 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
4099 5962 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
4100 5963 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
4101 5964 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
4102 5965 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
4103 5966 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
4104 5967 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
4105 5968 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
4106 5969 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
4107 5970 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
4108 5971 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
4109 5972 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
4110 5973 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
4111 5974 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
4112 5975 2.026636 ACGCAGCCTTTCCCTACATTTA 60.027 45.455 0.00 0.00 0.00 1.40
4113 5976 3.214328 CGCAGCCTTTCCCTACATTTAT 58.786 45.455 0.00 0.00 0.00 1.40
4114 5977 3.003689 CGCAGCCTTTCCCTACATTTATG 59.996 47.826 0.00 0.00 0.00 1.90
4115 5978 3.954258 GCAGCCTTTCCCTACATTTATGT 59.046 43.478 0.53 0.53 44.48 2.29
4116 5979 5.130350 GCAGCCTTTCCCTACATTTATGTA 58.870 41.667 2.84 2.84 41.97 2.29
4117 5980 5.592688 GCAGCCTTTCCCTACATTTATGTAA 59.407 40.000 4.32 0.00 42.20 2.41
4118 5981 6.238759 GCAGCCTTTCCCTACATTTATGTAAG 60.239 42.308 4.32 0.00 42.20 2.34
4119 5982 7.054124 CAGCCTTTCCCTACATTTATGTAAGA 58.946 38.462 4.32 2.22 42.20 2.10
4120 5983 7.227512 CAGCCTTTCCCTACATTTATGTAAGAG 59.772 40.741 4.32 0.00 42.20 2.85
4121 5984 6.486993 GCCTTTCCCTACATTTATGTAAGAGG 59.513 42.308 4.32 4.15 42.20 3.69
4122 5985 6.486993 CCTTTCCCTACATTTATGTAAGAGGC 59.513 42.308 4.32 0.00 42.20 4.70
4123 5986 6.824958 TTCCCTACATTTATGTAAGAGGCT 57.175 37.500 4.32 0.00 42.20 4.58
4124 5987 6.174720 TCCCTACATTTATGTAAGAGGCTG 57.825 41.667 0.00 0.00 42.20 4.85
4125 5988 5.665812 TCCCTACATTTATGTAAGAGGCTGT 59.334 40.000 0.00 0.00 42.20 4.40
4126 5989 6.157994 TCCCTACATTTATGTAAGAGGCTGTT 59.842 38.462 1.39 1.39 42.20 3.16
4127 5990 6.828785 CCCTACATTTATGTAAGAGGCTGTTT 59.171 38.462 0.90 0.00 42.20 2.83
4128 5991 7.201732 CCCTACATTTATGTAAGAGGCTGTTTG 60.202 40.741 0.90 0.00 42.20 2.93
4129 5992 5.954335 ACATTTATGTAAGAGGCTGTTTGC 58.046 37.500 0.90 0.00 39.68 3.68
4130 5993 5.476599 ACATTTATGTAAGAGGCTGTTTGCA 59.523 36.000 0.90 3.07 40.71 4.08
4131 5994 5.627499 TTTATGTAAGAGGCTGTTTGCAG 57.373 39.130 0.90 0.00 45.15 4.41
4132 5995 1.896220 TGTAAGAGGCTGTTTGCAGG 58.104 50.000 0.90 0.00 45.15 4.85
4133 5996 1.419762 TGTAAGAGGCTGTTTGCAGGA 59.580 47.619 0.90 0.00 45.15 3.86
4134 5997 1.807142 GTAAGAGGCTGTTTGCAGGAC 59.193 52.381 0.90 0.00 45.15 3.85
4135 5998 0.475906 AAGAGGCTGTTTGCAGGACT 59.524 50.000 0.00 0.00 45.15 3.85
4136 5999 0.475906 AGAGGCTGTTTGCAGGACTT 59.524 50.000 0.00 0.00 45.15 3.01
4137 6000 0.595095 GAGGCTGTTTGCAGGACTTG 59.405 55.000 0.00 0.00 45.15 3.16
4138 6001 0.183492 AGGCTGTTTGCAGGACTTGA 59.817 50.000 0.00 0.00 45.15 3.02
4139 6002 1.032014 GGCTGTTTGCAGGACTTGAA 58.968 50.000 4.27 0.00 45.15 2.69
4140 6003 1.269257 GGCTGTTTGCAGGACTTGAAC 60.269 52.381 4.27 0.00 45.15 3.18
4141 6004 1.269257 GCTGTTTGCAGGACTTGAACC 60.269 52.381 4.27 0.00 42.78 3.62
4142 6005 1.338020 CTGTTTGCAGGACTTGAACCC 59.662 52.381 4.27 0.00 39.01 4.11
4143 6006 1.341482 TGTTTGCAGGACTTGAACCCA 60.341 47.619 4.27 0.00 0.00 4.51
4144 6007 1.338020 GTTTGCAGGACTTGAACCCAG 59.662 52.381 0.00 0.00 0.00 4.45
4145 6008 0.823356 TTGCAGGACTTGAACCCAGC 60.823 55.000 0.00 0.00 0.00 4.85
4146 6009 1.073897 GCAGGACTTGAACCCAGCT 59.926 57.895 0.00 0.00 0.00 4.24
4147 6010 0.538287 GCAGGACTTGAACCCAGCTT 60.538 55.000 0.00 0.00 0.00 3.74
4148 6011 1.986882 CAGGACTTGAACCCAGCTTT 58.013 50.000 0.00 0.00 0.00 3.51
4149 6012 2.814097 GCAGGACTTGAACCCAGCTTTA 60.814 50.000 0.00 0.00 0.00 1.85
4150 6013 2.814336 CAGGACTTGAACCCAGCTTTAC 59.186 50.000 0.00 0.00 0.00 2.01
4151 6014 2.160205 GGACTTGAACCCAGCTTTACC 58.840 52.381 0.00 0.00 0.00 2.85
4152 6015 2.488347 GGACTTGAACCCAGCTTTACCA 60.488 50.000 0.00 0.00 0.00 3.25
4153 6016 2.552743 GACTTGAACCCAGCTTTACCAC 59.447 50.000 0.00 0.00 0.00 4.16
4154 6017 2.174854 ACTTGAACCCAGCTTTACCACT 59.825 45.455 0.00 0.00 0.00 4.00
4155 6018 2.270352 TGAACCCAGCTTTACCACTG 57.730 50.000 0.00 0.00 0.00 3.66
4156 6019 0.881796 GAACCCAGCTTTACCACTGC 59.118 55.000 0.00 0.00 32.37 4.40
4157 6020 0.478507 AACCCAGCTTTACCACTGCT 59.521 50.000 0.00 0.00 37.56 4.24
4158 6021 0.036875 ACCCAGCTTTACCACTGCTC 59.963 55.000 0.00 0.00 34.51 4.26
4159 6022 0.678048 CCCAGCTTTACCACTGCTCC 60.678 60.000 0.00 0.00 34.51 4.70
4160 6023 0.036732 CCAGCTTTACCACTGCTCCA 59.963 55.000 0.00 0.00 34.51 3.86
4161 6024 1.545428 CCAGCTTTACCACTGCTCCAA 60.545 52.381 0.00 0.00 34.51 3.53
4162 6025 1.808945 CAGCTTTACCACTGCTCCAAG 59.191 52.381 0.00 0.00 34.51 3.61
4163 6026 1.168714 GCTTTACCACTGCTCCAAGG 58.831 55.000 0.00 0.00 0.00 3.61
4164 6027 1.168714 CTTTACCACTGCTCCAAGGC 58.831 55.000 0.00 0.00 0.00 4.35
4165 6028 0.771127 TTTACCACTGCTCCAAGGCT 59.229 50.000 0.00 0.00 0.00 4.58
4166 6029 0.324943 TTACCACTGCTCCAAGGCTC 59.675 55.000 0.00 0.00 0.00 4.70
4167 6030 1.553690 TACCACTGCTCCAAGGCTCC 61.554 60.000 0.00 0.00 0.00 4.70
4168 6031 2.045536 CACTGCTCCAAGGCTCCC 60.046 66.667 0.00 0.00 0.00 4.30
4169 6032 3.334054 ACTGCTCCAAGGCTCCCC 61.334 66.667 0.00 0.00 0.00 4.81
4170 6033 3.013932 CTGCTCCAAGGCTCCCCT 61.014 66.667 0.00 0.00 45.77 4.79
4185 6048 3.070302 GCTCCCCTTCGTAAATGATCTCT 59.930 47.826 0.00 0.00 0.00 3.10
4263 6126 0.386478 GTGTCTCGCGGTCGTTACTT 60.386 55.000 6.13 0.00 36.96 2.24
4271 6134 1.301165 GGTCGTTACTTGTGGCGGT 60.301 57.895 0.00 0.00 0.00 5.68
4273 6136 0.509929 GTCGTTACTTGTGGCGGTTC 59.490 55.000 0.00 0.00 0.00 3.62
4278 6141 3.186817 CGTTACTTGTGGCGGTTCATAAA 59.813 43.478 0.00 0.00 0.00 1.40
4290 6153 7.491048 GTGGCGGTTCATAAATTGACATATTTT 59.509 33.333 0.00 0.00 32.84 1.82
4367 6230 5.095691 ACAATAGACAAGTTGTTCAAGCG 57.904 39.130 10.45 0.78 35.13 4.68
4379 6242 1.666189 GTTCAAGCGGAGGATACAAGC 59.334 52.381 0.00 0.00 41.41 4.01
4427 6290 6.603201 CAGATATCTTCCTTTGCCCAAGTTAA 59.397 38.462 1.33 0.00 0.00 2.01
4429 6292 8.502738 AGATATCTTCCTTTGCCCAAGTTAATA 58.497 33.333 0.00 0.00 0.00 0.98
4446 6309 7.338800 AGTTAATAAGCAGCTAAACATGCAT 57.661 32.000 0.00 0.00 45.01 3.96
4456 6319 6.624861 GCAGCTAAACATGCATTTTACTACCA 60.625 38.462 0.00 0.00 42.11 3.25
4457 6320 7.312154 CAGCTAAACATGCATTTTACTACCAA 58.688 34.615 0.00 0.00 0.00 3.67
4476 6339 4.037923 ACCAAAAGTGTGATTAACCAGCAG 59.962 41.667 0.00 0.00 0.00 4.24
4503 6366 0.536006 GTTCAACCTGCCAGTCTGCT 60.536 55.000 0.00 0.00 0.00 4.24
4521 6384 1.202698 GCTAGCCCTCCATACCAACTG 60.203 57.143 2.29 0.00 0.00 3.16
4571 6434 1.915141 ATTGAGGTTGGCAGTCTTGG 58.085 50.000 0.00 0.00 0.00 3.61
4577 6440 1.304381 TTGGCAGTCTTGGGGCATC 60.304 57.895 0.00 0.00 39.46 3.91
4582 6445 0.033796 CAGTCTTGGGGCATCACCAT 60.034 55.000 0.00 0.00 42.05 3.55
4594 6457 1.040893 ATCACCATCGTCGGCCAGTA 61.041 55.000 2.24 0.00 0.00 2.74
4601 6464 2.663196 GTCGGCCAGTAAGGTGCT 59.337 61.111 2.24 0.00 40.61 4.40
4603 6466 0.464452 GTCGGCCAGTAAGGTGCTAT 59.536 55.000 2.24 0.00 40.61 2.97
4684 6559 7.124448 AGTCCTTCTACTTTCGTATTTCCATCT 59.876 37.037 0.00 0.00 0.00 2.90
4685 6560 7.764901 GTCCTTCTACTTTCGTATTTCCATCTT 59.235 37.037 0.00 0.00 0.00 2.40
4686 6561 8.974238 TCCTTCTACTTTCGTATTTCCATCTTA 58.026 33.333 0.00 0.00 0.00 2.10
4687 6562 9.765795 CCTTCTACTTTCGTATTTCCATCTTAT 57.234 33.333 0.00 0.00 0.00 1.73
4722 6597 2.871133 CATGTGCGCATTGATTTCACT 58.129 42.857 15.91 0.00 31.99 3.41
4740 6615 9.315525 GATTTCACTCTATTTAGGTGTTACTCC 57.684 37.037 0.00 0.00 33.30 3.85
4741 6616 6.786967 TCACTCTATTTAGGTGTTACTCCC 57.213 41.667 0.00 0.00 33.30 4.30
4745 6620 5.845734 TCTATTTAGGTGTTACTCCCTCCA 58.154 41.667 0.00 0.00 32.08 3.86
4807 6682 7.783090 ACGGACTACATACGGATGTATATAG 57.217 40.000 20.64 13.28 45.42 1.31
4808 6683 7.559486 ACGGACTACATACGGATGTATATAGA 58.441 38.462 20.64 0.00 45.42 1.98
4844 6719 8.728088 AGTGTAAATTCACTTATTTTGCTTCG 57.272 30.769 0.00 0.00 44.92 3.79
4856 6734 9.298774 ACTTATTTTGCTTCGTATGTAGTCTAC 57.701 33.333 2.81 2.81 0.00 2.59
4861 6739 6.445357 TGCTTCGTATGTAGTCTACATTGA 57.555 37.500 26.52 21.31 46.69 2.57
5141 7019 4.476297 TCATCTTCCATTGCCTGCAATAT 58.524 39.130 16.35 4.41 43.92 1.28
5159 7037 6.601613 TGCAATATTCGTTTTCCTCTGGTTAT 59.398 34.615 0.00 0.00 0.00 1.89
5169 7047 8.673711 CGTTTTCCTCTGGTTATGATATCAAAA 58.326 33.333 9.99 0.00 0.00 2.44
5201 7087 0.732880 CCCGGCGTCGTGATATCATC 60.733 60.000 9.28 2.20 33.95 2.92
5207 7093 4.671766 CGGCGTCGTGATATCATCTATTGA 60.672 45.833 9.02 0.00 39.12 2.57
5213 7099 5.183140 TCGTGATATCATCTATTGAGCGGAA 59.817 40.000 9.02 0.00 37.89 4.30
5216 7102 2.910688 TCATCTATTGAGCGGAACCC 57.089 50.000 0.00 0.00 0.00 4.11
5232 7118 2.491152 CCGATGCAACACATGGGC 59.509 61.111 0.00 0.00 46.17 5.36
5251 7137 7.341769 ACATGGGCAATTAGCTAGTCATAAAAA 59.658 33.333 0.00 0.00 44.79 1.94
5285 7171 8.990163 AACTACTTGTCCTAAGAATCCAAAAA 57.010 30.769 0.00 0.00 0.00 1.94
5372 7258 5.462405 GGAGTATGACGAGCTGGTTTATAG 58.538 45.833 1.83 0.00 0.00 1.31
5373 7259 5.009811 GGAGTATGACGAGCTGGTTTATAGT 59.990 44.000 1.83 8.22 0.00 2.12
5374 7260 6.461231 GGAGTATGACGAGCTGGTTTATAGTT 60.461 42.308 1.83 0.00 0.00 2.24
5375 7261 6.875076 AGTATGACGAGCTGGTTTATAGTTT 58.125 36.000 1.83 0.00 0.00 2.66
5376 7262 8.004087 AGTATGACGAGCTGGTTTATAGTTTA 57.996 34.615 1.83 0.00 0.00 2.01
5377 7263 8.136165 AGTATGACGAGCTGGTTTATAGTTTAG 58.864 37.037 1.83 0.00 0.00 1.85
5378 7264 6.519679 TGACGAGCTGGTTTATAGTTTAGA 57.480 37.500 1.83 0.00 0.00 2.10
5379 7265 6.561614 TGACGAGCTGGTTTATAGTTTAGAG 58.438 40.000 1.83 0.00 0.00 2.43
5380 7266 5.903810 ACGAGCTGGTTTATAGTTTAGAGG 58.096 41.667 0.00 0.00 0.00 3.69
5381 7267 5.421374 ACGAGCTGGTTTATAGTTTAGAGGT 59.579 40.000 0.00 0.00 0.00 3.85
5382 7268 5.749109 CGAGCTGGTTTATAGTTTAGAGGTG 59.251 44.000 0.00 0.00 0.00 4.00
5383 7269 5.990668 AGCTGGTTTATAGTTTAGAGGTGG 58.009 41.667 0.00 0.00 0.00 4.61
5384 7270 5.724854 AGCTGGTTTATAGTTTAGAGGTGGA 59.275 40.000 0.00 0.00 0.00 4.02
5385 7271 6.214819 AGCTGGTTTATAGTTTAGAGGTGGAA 59.785 38.462 0.00 0.00 0.00 3.53
5386 7272 6.882678 GCTGGTTTATAGTTTAGAGGTGGAAA 59.117 38.462 0.00 0.00 0.00 3.13
5387 7273 7.556635 GCTGGTTTATAGTTTAGAGGTGGAAAT 59.443 37.037 0.00 0.00 0.00 2.17
5394 7280 8.682936 ATAGTTTAGAGGTGGAAATATTGCAG 57.317 34.615 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.034896 GAAGACCTTGTCGCCTCCAA 59.965 55.000 0.00 0.00 37.67 3.53
2 3 0.670854 GTGAAGACCTTGTCGCCTCC 60.671 60.000 0.00 0.00 37.67 4.30
3 4 0.670854 GGTGAAGACCTTGTCGCCTC 60.671 60.000 0.00 0.00 40.59 4.70
5 6 3.967715 GGTGAAGACCTTGTCGCC 58.032 61.111 0.00 0.00 39.47 5.54
13 14 0.690762 TGGTGGCTAAGGTGAAGACC 59.309 55.000 0.00 0.00 43.52 3.85
14 15 1.610886 GGTGGTGGCTAAGGTGAAGAC 60.611 57.143 0.00 0.00 0.00 3.01
15 16 0.690762 GGTGGTGGCTAAGGTGAAGA 59.309 55.000 0.00 0.00 0.00 2.87
16 17 0.673644 CGGTGGTGGCTAAGGTGAAG 60.674 60.000 0.00 0.00 0.00 3.02
17 18 1.373435 CGGTGGTGGCTAAGGTGAA 59.627 57.895 0.00 0.00 0.00 3.18
18 19 1.412453 AACGGTGGTGGCTAAGGTGA 61.412 55.000 0.00 0.00 0.00 4.02
19 20 1.072505 AACGGTGGTGGCTAAGGTG 59.927 57.895 0.00 0.00 0.00 4.00
20 21 1.072505 CAACGGTGGTGGCTAAGGT 59.927 57.895 0.00 0.00 0.00 3.50
21 22 1.072505 ACAACGGTGGTGGCTAAGG 59.927 57.895 4.97 0.00 0.00 2.69
22 23 0.250124 TCACAACGGTGGTGGCTAAG 60.250 55.000 15.39 0.00 45.32 2.18
23 24 0.533308 GTCACAACGGTGGTGGCTAA 60.533 55.000 12.94 0.00 45.32 3.09
24 25 1.070105 GTCACAACGGTGGTGGCTA 59.930 57.895 12.94 0.00 45.32 3.93
25 26 2.203153 GTCACAACGGTGGTGGCT 60.203 61.111 12.94 0.00 45.32 4.75
26 27 3.645975 CGTCACAACGGTGGTGGC 61.646 66.667 15.39 12.90 45.21 5.01
35 36 2.538132 CGTTTTCCTTCACCGTCACAAC 60.538 50.000 0.00 0.00 0.00 3.32
36 37 1.666700 CGTTTTCCTTCACCGTCACAA 59.333 47.619 0.00 0.00 0.00 3.33
37 38 1.134759 TCGTTTTCCTTCACCGTCACA 60.135 47.619 0.00 0.00 0.00 3.58
38 39 1.525619 CTCGTTTTCCTTCACCGTCAC 59.474 52.381 0.00 0.00 0.00 3.67
39 40 1.137479 ACTCGTTTTCCTTCACCGTCA 59.863 47.619 0.00 0.00 0.00 4.35
40 41 1.861971 ACTCGTTTTCCTTCACCGTC 58.138 50.000 0.00 0.00 0.00 4.79
41 42 2.320745 AACTCGTTTTCCTTCACCGT 57.679 45.000 0.00 0.00 0.00 4.83
42 43 2.348218 CGAAACTCGTTTTCCTTCACCG 60.348 50.000 0.00 0.00 40.67 4.94
43 44 2.867975 TCGAAACTCGTTTTCCTTCACC 59.132 45.455 0.00 0.00 40.67 4.02
44 45 4.525411 TTCGAAACTCGTTTTCCTTCAC 57.475 40.909 0.00 0.00 40.67 3.18
45 46 5.526111 AGAATTCGAAACTCGTTTTCCTTCA 59.474 36.000 0.00 0.00 40.67 3.02
46 47 5.986936 AGAATTCGAAACTCGTTTTCCTTC 58.013 37.500 0.00 0.00 40.67 3.46
47 48 6.704937 ACTAGAATTCGAAACTCGTTTTCCTT 59.295 34.615 0.00 0.00 40.67 3.36
48 49 6.221659 ACTAGAATTCGAAACTCGTTTTCCT 58.778 36.000 0.00 0.00 40.67 3.36
49 50 6.463483 ACTAGAATTCGAAACTCGTTTTCC 57.537 37.500 0.00 0.00 40.67 3.13
50 51 8.645487 ACATACTAGAATTCGAAACTCGTTTTC 58.355 33.333 0.00 0.00 41.35 2.29
51 52 8.530269 ACATACTAGAATTCGAAACTCGTTTT 57.470 30.769 0.00 0.00 41.35 2.43
52 53 8.530269 AACATACTAGAATTCGAAACTCGTTT 57.470 30.769 0.00 0.00 41.35 3.60
53 54 8.530269 AAACATACTAGAATTCGAAACTCGTT 57.470 30.769 0.00 0.00 41.35 3.85
54 55 9.630098 TTAAACATACTAGAATTCGAAACTCGT 57.370 29.630 0.00 9.61 41.35 4.18
79 80 9.606631 CTCAGCCTAGTCAGATTATTACTTTTT 57.393 33.333 0.00 0.00 0.00 1.94
80 81 8.763601 ACTCAGCCTAGTCAGATTATTACTTTT 58.236 33.333 0.00 0.00 0.00 2.27
81 82 8.312669 ACTCAGCCTAGTCAGATTATTACTTT 57.687 34.615 0.00 0.00 0.00 2.66
82 83 7.906199 ACTCAGCCTAGTCAGATTATTACTT 57.094 36.000 0.00 0.00 0.00 2.24
83 84 7.201956 CCAACTCAGCCTAGTCAGATTATTACT 60.202 40.741 0.00 0.00 0.00 2.24
84 85 6.926272 CCAACTCAGCCTAGTCAGATTATTAC 59.074 42.308 0.00 0.00 0.00 1.89
85 86 6.042093 CCCAACTCAGCCTAGTCAGATTATTA 59.958 42.308 0.00 0.00 0.00 0.98
86 87 5.163258 CCCAACTCAGCCTAGTCAGATTATT 60.163 44.000 0.00 0.00 0.00 1.40
87 88 4.346418 CCCAACTCAGCCTAGTCAGATTAT 59.654 45.833 0.00 0.00 0.00 1.28
88 89 3.706594 CCCAACTCAGCCTAGTCAGATTA 59.293 47.826 0.00 0.00 0.00 1.75
89 90 2.503356 CCCAACTCAGCCTAGTCAGATT 59.497 50.000 0.00 0.00 0.00 2.40
90 91 2.114616 CCCAACTCAGCCTAGTCAGAT 58.885 52.381 0.00 0.00 0.00 2.90
91 92 1.561643 CCCAACTCAGCCTAGTCAGA 58.438 55.000 0.00 0.00 0.00 3.27
92 93 0.107945 GCCCAACTCAGCCTAGTCAG 60.108 60.000 0.00 0.00 0.00 3.51
93 94 1.553690 GGCCCAACTCAGCCTAGTCA 61.554 60.000 0.00 0.00 46.14 3.41
94 95 1.222113 GGCCCAACTCAGCCTAGTC 59.778 63.158 0.00 0.00 46.14 2.59
95 96 3.404773 GGCCCAACTCAGCCTAGT 58.595 61.111 0.00 0.00 46.14 2.57
100 101 0.032540 CAAAAGTGGCCCAACTCAGC 59.967 55.000 0.00 0.00 0.00 4.26
101 102 1.402787 ACAAAAGTGGCCCAACTCAG 58.597 50.000 0.00 0.00 0.00 3.35
102 103 1.859302 AACAAAAGTGGCCCAACTCA 58.141 45.000 0.00 0.00 0.00 3.41
103 104 2.979814 AAACAAAAGTGGCCCAACTC 57.020 45.000 0.00 0.00 0.00 3.01
104 105 4.407296 TCATTAAACAAAAGTGGCCCAACT 59.593 37.500 0.00 0.00 0.00 3.16
105 106 4.698575 TCATTAAACAAAAGTGGCCCAAC 58.301 39.130 0.00 0.00 0.00 3.77
106 107 5.359194 TTCATTAAACAAAAGTGGCCCAA 57.641 34.783 0.00 0.00 0.00 4.12
107 108 5.359194 TTTCATTAAACAAAAGTGGCCCA 57.641 34.783 0.00 0.00 0.00 5.36
108 109 6.262049 ACATTTTCATTAAACAAAAGTGGCCC 59.738 34.615 0.00 0.00 0.00 5.80
109 110 7.011857 TGACATTTTCATTAAACAAAAGTGGCC 59.988 33.333 0.00 0.00 0.00 5.36
110 111 7.914465 TGACATTTTCATTAAACAAAAGTGGC 58.086 30.769 7.49 5.56 0.00 5.01
136 137 8.243426 ACACGATGCTACATTCATTACATTTTT 58.757 29.630 0.00 0.00 0.00 1.94
137 138 7.761409 ACACGATGCTACATTCATTACATTTT 58.239 30.769 0.00 0.00 0.00 1.82
138 139 7.320443 ACACGATGCTACATTCATTACATTT 57.680 32.000 0.00 0.00 0.00 2.32
139 140 6.925610 ACACGATGCTACATTCATTACATT 57.074 33.333 0.00 0.00 0.00 2.71
140 141 7.433680 TCTACACGATGCTACATTCATTACAT 58.566 34.615 0.00 0.00 0.00 2.29
141 142 6.801575 TCTACACGATGCTACATTCATTACA 58.198 36.000 0.00 0.00 0.00 2.41
142 143 7.724205 CATCTACACGATGCTACATTCATTAC 58.276 38.462 0.00 0.00 42.75 1.89
143 144 7.873739 CATCTACACGATGCTACATTCATTA 57.126 36.000 0.00 0.00 42.75 1.90
144 145 6.775939 CATCTACACGATGCTACATTCATT 57.224 37.500 0.00 0.00 42.75 2.57
165 166 4.806640 AAACAAGCCGGATGATTTTCAT 57.193 36.364 5.05 0.00 40.34 2.57
166 167 5.713792 TTAAACAAGCCGGATGATTTTCA 57.286 34.783 5.05 0.00 0.00 2.69
167 168 6.255670 GGATTTAAACAAGCCGGATGATTTTC 59.744 38.462 5.05 0.00 0.00 2.29
168 169 6.106003 GGATTTAAACAAGCCGGATGATTTT 58.894 36.000 5.05 1.69 0.00 1.82
169 170 5.395214 GGGATTTAAACAAGCCGGATGATTT 60.395 40.000 5.05 6.11 0.00 2.17
170 171 4.099419 GGGATTTAAACAAGCCGGATGATT 59.901 41.667 5.05 7.04 0.00 2.57
171 172 3.636764 GGGATTTAAACAAGCCGGATGAT 59.363 43.478 5.05 0.00 0.00 2.45
172 173 3.020984 GGGATTTAAACAAGCCGGATGA 58.979 45.455 5.05 0.00 0.00 2.92
173 174 2.757868 TGGGATTTAAACAAGCCGGATG 59.242 45.455 5.05 5.76 0.00 3.51
174 175 3.094484 TGGGATTTAAACAAGCCGGAT 57.906 42.857 5.05 0.00 0.00 4.18
175 176 2.588464 TGGGATTTAAACAAGCCGGA 57.412 45.000 5.05 0.00 0.00 5.14
176 177 3.885724 AATGGGATTTAAACAAGCCGG 57.114 42.857 0.00 0.00 0.00 6.13
177 178 4.815269 TCAAATGGGATTTAAACAAGCCG 58.185 39.130 0.00 0.00 0.00 5.52
178 179 7.174772 ACATTTCAAATGGGATTTAAACAAGCC 59.825 33.333 14.70 0.00 0.00 4.35
179 180 8.098220 ACATTTCAAATGGGATTTAAACAAGC 57.902 30.769 14.70 0.00 0.00 4.01
187 188 7.975616 CGTTCTCATACATTTCAAATGGGATTT 59.024 33.333 14.70 0.00 30.47 2.17
188 189 7.416664 CCGTTCTCATACATTTCAAATGGGATT 60.417 37.037 14.70 0.00 30.47 3.01
189 190 6.039717 CCGTTCTCATACATTTCAAATGGGAT 59.960 38.462 14.70 4.71 30.47 3.85
190 191 5.356751 CCGTTCTCATACATTTCAAATGGGA 59.643 40.000 14.70 7.89 0.00 4.37
191 192 5.450412 CCCGTTCTCATACATTTCAAATGGG 60.450 44.000 14.70 4.03 35.70 4.00
192 193 5.450412 CCCCGTTCTCATACATTTCAAATGG 60.450 44.000 14.70 0.00 0.00 3.16
193 194 5.125417 ACCCCGTTCTCATACATTTCAAATG 59.875 40.000 8.67 8.67 0.00 2.32
194 195 5.261216 ACCCCGTTCTCATACATTTCAAAT 58.739 37.500 0.00 0.00 0.00 2.32
195 196 4.658063 ACCCCGTTCTCATACATTTCAAA 58.342 39.130 0.00 0.00 0.00 2.69
196 197 4.295141 ACCCCGTTCTCATACATTTCAA 57.705 40.909 0.00 0.00 0.00 2.69
197 198 3.992943 ACCCCGTTCTCATACATTTCA 57.007 42.857 0.00 0.00 0.00 2.69
198 199 5.522824 GTCTAACCCCGTTCTCATACATTTC 59.477 44.000 0.00 0.00 0.00 2.17
199 200 5.425630 GTCTAACCCCGTTCTCATACATTT 58.574 41.667 0.00 0.00 0.00 2.32
200 201 4.441079 CGTCTAACCCCGTTCTCATACATT 60.441 45.833 0.00 0.00 0.00 2.71
201 202 3.067742 CGTCTAACCCCGTTCTCATACAT 59.932 47.826 0.00 0.00 0.00 2.29
202 203 2.424601 CGTCTAACCCCGTTCTCATACA 59.575 50.000 0.00 0.00 0.00 2.29
203 204 2.797439 GCGTCTAACCCCGTTCTCATAC 60.797 54.545 0.00 0.00 0.00 2.39
204 205 1.406539 GCGTCTAACCCCGTTCTCATA 59.593 52.381 0.00 0.00 0.00 2.15
205 206 0.175073 GCGTCTAACCCCGTTCTCAT 59.825 55.000 0.00 0.00 0.00 2.90
206 207 1.588082 GCGTCTAACCCCGTTCTCA 59.412 57.895 0.00 0.00 0.00 3.27
207 208 1.515736 CGCGTCTAACCCCGTTCTC 60.516 63.158 0.00 0.00 0.00 2.87
208 209 2.570181 CGCGTCTAACCCCGTTCT 59.430 61.111 0.00 0.00 0.00 3.01
209 210 2.507769 CCGCGTCTAACCCCGTTC 60.508 66.667 4.92 0.00 0.00 3.95
210 211 2.990967 TCCGCGTCTAACCCCGTT 60.991 61.111 4.92 0.00 0.00 4.44
211 212 3.752339 GTCCGCGTCTAACCCCGT 61.752 66.667 4.92 0.00 0.00 5.28
212 213 3.285523 TTGTCCGCGTCTAACCCCG 62.286 63.158 4.92 0.00 0.00 5.73
213 214 1.739196 GTTGTCCGCGTCTAACCCC 60.739 63.158 4.92 0.00 0.00 4.95
214 215 0.527565 TAGTTGTCCGCGTCTAACCC 59.472 55.000 4.92 0.00 0.00 4.11
215 216 1.068333 TGTAGTTGTCCGCGTCTAACC 60.068 52.381 4.92 0.00 0.00 2.85
216 217 2.248487 CTGTAGTTGTCCGCGTCTAAC 58.752 52.381 4.92 6.93 0.00 2.34
217 218 1.200716 CCTGTAGTTGTCCGCGTCTAA 59.799 52.381 4.92 0.00 0.00 2.10
218 219 0.806868 CCTGTAGTTGTCCGCGTCTA 59.193 55.000 4.92 0.00 0.00 2.59
219 220 1.177256 ACCTGTAGTTGTCCGCGTCT 61.177 55.000 4.92 0.00 0.00 4.18
220 221 1.007336 CACCTGTAGTTGTCCGCGTC 61.007 60.000 4.92 0.00 0.00 5.19
221 222 1.006571 CACCTGTAGTTGTCCGCGT 60.007 57.895 4.92 0.00 0.00 6.01
222 223 0.599204 AACACCTGTAGTTGTCCGCG 60.599 55.000 0.00 0.00 0.00 6.46
223 224 0.865769 CAACACCTGTAGTTGTCCGC 59.134 55.000 0.00 0.00 41.00 5.54
224 225 2.519377 TCAACACCTGTAGTTGTCCG 57.481 50.000 6.03 0.00 44.97 4.79
225 226 5.767816 ATTTTCAACACCTGTAGTTGTCC 57.232 39.130 6.03 0.00 44.97 4.02
226 227 7.117236 TCGATATTTTCAACACCTGTAGTTGTC 59.883 37.037 6.03 0.00 44.97 3.18
227 228 6.932400 TCGATATTTTCAACACCTGTAGTTGT 59.068 34.615 6.03 0.00 44.97 3.32
228 229 7.359262 TCGATATTTTCAACACCTGTAGTTG 57.641 36.000 0.00 0.00 45.82 3.16
229 230 6.594159 CCTCGATATTTTCAACACCTGTAGTT 59.406 38.462 0.00 0.00 0.00 2.24
230 231 6.106673 CCTCGATATTTTCAACACCTGTAGT 58.893 40.000 0.00 0.00 0.00 2.73
231 232 5.523916 CCCTCGATATTTTCAACACCTGTAG 59.476 44.000 0.00 0.00 0.00 2.74
232 233 5.424757 CCCTCGATATTTTCAACACCTGTA 58.575 41.667 0.00 0.00 0.00 2.74
233 234 4.261801 CCCTCGATATTTTCAACACCTGT 58.738 43.478 0.00 0.00 0.00 4.00
234 235 3.627577 CCCCTCGATATTTTCAACACCTG 59.372 47.826 0.00 0.00 0.00 4.00
235 236 3.265995 ACCCCTCGATATTTTCAACACCT 59.734 43.478 0.00 0.00 0.00 4.00
236 237 3.617284 ACCCCTCGATATTTTCAACACC 58.383 45.455 0.00 0.00 0.00 4.16
237 238 6.746745 TTTACCCCTCGATATTTTCAACAC 57.253 37.500 0.00 0.00 0.00 3.32
238 239 7.169591 TCTTTTACCCCTCGATATTTTCAACA 58.830 34.615 0.00 0.00 0.00 3.33
239 240 7.619964 TCTTTTACCCCTCGATATTTTCAAC 57.380 36.000 0.00 0.00 0.00 3.18
240 241 8.638629 TTTCTTTTACCCCTCGATATTTTCAA 57.361 30.769 0.00 0.00 0.00 2.69
241 242 7.886446 ACTTTCTTTTACCCCTCGATATTTTCA 59.114 33.333 0.00 0.00 0.00 2.69
242 243 8.277490 ACTTTCTTTTACCCCTCGATATTTTC 57.723 34.615 0.00 0.00 0.00 2.29
243 244 8.520351 CAACTTTCTTTTACCCCTCGATATTTT 58.480 33.333 0.00 0.00 0.00 1.82
244 245 7.362660 GCAACTTTCTTTTACCCCTCGATATTT 60.363 37.037 0.00 0.00 0.00 1.40
245 246 6.095021 GCAACTTTCTTTTACCCCTCGATATT 59.905 38.462 0.00 0.00 0.00 1.28
246 247 5.589050 GCAACTTTCTTTTACCCCTCGATAT 59.411 40.000 0.00 0.00 0.00 1.63
247 248 4.939439 GCAACTTTCTTTTACCCCTCGATA 59.061 41.667 0.00 0.00 0.00 2.92
248 249 3.756963 GCAACTTTCTTTTACCCCTCGAT 59.243 43.478 0.00 0.00 0.00 3.59
249 250 3.143728 GCAACTTTCTTTTACCCCTCGA 58.856 45.455 0.00 0.00 0.00 4.04
250 251 2.228103 GGCAACTTTCTTTTACCCCTCG 59.772 50.000 0.00 0.00 0.00 4.63
251 252 2.561419 GGGCAACTTTCTTTTACCCCTC 59.439 50.000 0.00 0.00 0.00 4.30
252 253 2.090999 TGGGCAACTTTCTTTTACCCCT 60.091 45.455 0.00 0.00 34.83 4.79
253 254 2.321719 TGGGCAACTTTCTTTTACCCC 58.678 47.619 0.00 0.00 34.83 4.95
254 255 5.731957 TTATGGGCAACTTTCTTTTACCC 57.268 39.130 0.00 0.00 36.36 3.69
281 282 5.763204 AGGAAGAAGACGCACTTTTGATTTA 59.237 36.000 0.00 0.00 39.13 1.40
283 284 4.137543 AGGAAGAAGACGCACTTTTGATT 58.862 39.130 0.00 0.00 39.13 2.57
404 1092 2.882170 TCGGGAAGAGATTGCGAGA 58.118 52.632 0.00 0.00 0.00 4.04
428 1598 2.747855 GGTTCTTGCTCCTGGCCG 60.748 66.667 0.00 0.00 40.92 6.13
1042 2218 1.759445 CTCGAACATCTCCTCCACCAT 59.241 52.381 0.00 0.00 0.00 3.55
1080 2256 2.171725 GTAGCACGCCCAATCGGTC 61.172 63.158 0.00 0.00 0.00 4.79
1187 2363 4.038080 GGTTGTTTCCTGCCGCCG 62.038 66.667 0.00 0.00 0.00 6.46
1215 2391 1.014044 GCTTCTGATTGTCGTCGGCA 61.014 55.000 0.00 0.00 0.00 5.69
1348 2728 2.814336 GCTCAAGGTTCCTCATTTCGTT 59.186 45.455 0.00 0.00 0.00 3.85
1365 2745 5.072741 AGTTGCCTTTTCTTATCTTGCTCA 58.927 37.500 0.00 0.00 0.00 4.26
1406 2786 2.099405 TCCTCATGTCGTAGTGATGCA 58.901 47.619 0.00 0.00 0.00 3.96
1586 3098 0.250858 TGACTCCACCTTGTGCATGG 60.251 55.000 0.00 0.00 34.58 3.66
1587 3099 0.877071 GTGACTCCACCTTGTGCATG 59.123 55.000 0.00 0.00 37.33 4.06
1595 3107 1.978580 CCTGGTTAAGTGACTCCACCT 59.021 52.381 12.76 0.00 44.22 4.00
1699 3211 2.288213 CGCGCATCTCCTCCTGTAAATA 60.288 50.000 8.75 0.00 0.00 1.40
1771 3408 2.576191 TCCGAACCCTCTCCAATTCATT 59.424 45.455 0.00 0.00 0.00 2.57
1794 3431 4.709886 TGCTTCCTTACATGTACTAGCTCA 59.290 41.667 19.79 8.60 0.00 4.26
1843 3480 6.678900 GCCTTGTTGATTGAATCCAGTATGTC 60.679 42.308 2.26 0.00 0.00 3.06
2012 3652 1.372623 AGCGTTTTCCGGACGACTC 60.373 57.895 17.44 8.13 42.82 3.36
2153 3793 6.292221 CGATGACTTGATGAGACATAAAGCAG 60.292 42.308 8.30 0.00 40.14 4.24
2169 3809 7.582435 AAATTAGTGACAGTACGATGACTTG 57.418 36.000 0.00 0.00 0.00 3.16
2170 3810 9.136952 GTAAAATTAGTGACAGTACGATGACTT 57.863 33.333 0.00 0.00 0.00 3.01
2176 3816 6.798476 CACGAGTAAAATTAGTGACAGTACGA 59.202 38.462 0.00 0.00 35.03 3.43
2228 3871 6.078202 TGTCCATTCGTAAAATTCTGCAAA 57.922 33.333 0.00 0.00 0.00 3.68
2265 3911 2.954318 CAAGATCGCCCATCCTTTTGAT 59.046 45.455 0.00 0.00 30.71 2.57
2318 3964 7.831193 ACTTGTGCATCCTCTTGTAATAAATCT 59.169 33.333 0.00 0.00 0.00 2.40
2369 4015 0.449388 CTGCAATTCGAGCTTCCCAC 59.551 55.000 0.00 0.00 0.00 4.61
2391 4037 2.031120 CTCAAAAGGGTGCCAGTTTGA 58.969 47.619 14.00 14.00 37.42 2.69
2471 4117 8.818057 GCGAGTCTATAACAAGATGTAAATGTT 58.182 33.333 0.00 0.00 40.22 2.71
2475 4121 8.942338 ATTGCGAGTCTATAACAAGATGTAAA 57.058 30.769 0.00 0.00 0.00 2.01
2511 4157 3.599343 TGCATGTACTGTCAGATGGAAC 58.401 45.455 6.91 0.00 0.00 3.62
2549 4196 8.214721 AGCTTAACATTATCCTTTAGCAGAAC 57.785 34.615 0.00 0.00 0.00 3.01
2630 4277 4.083484 GGGGTTGTACTCGTTGATTTCAAG 60.083 45.833 0.00 0.00 36.39 3.02
2667 4314 1.117150 GTTCCATAGCTCCGGTACCA 58.883 55.000 13.54 0.00 0.00 3.25
2668 4315 1.411041 AGTTCCATAGCTCCGGTACC 58.589 55.000 0.16 0.16 0.00 3.34
2905 4552 5.106157 CCAAAAGGCGATCACTGTTAATCTT 60.106 40.000 0.00 0.00 0.00 2.40
2914 4561 2.270352 TCAACCAAAAGGCGATCACT 57.730 45.000 0.00 0.00 0.00 3.41
3054 4713 8.566109 ACTACCCCTTTATACAAGATTTCCAAT 58.434 33.333 0.00 0.00 0.00 3.16
3079 4738 7.842721 CGTACATGCCTACGATTAAAGTTTAAC 59.157 37.037 10.20 4.50 41.75 2.01
3475 5140 6.073314 AGGTGATTCATATCCCATCCTTTTG 58.927 40.000 0.00 0.00 0.00 2.44
3490 5155 3.855255 TGTTGGTGAGAAGGTGATTCA 57.145 42.857 0.00 0.00 40.67 2.57
3491 5156 3.882888 TGTTGTTGGTGAGAAGGTGATTC 59.117 43.478 0.00 0.00 38.28 2.52
3528 5193 0.326048 ATCCCTCTGTGTCTCCCCAG 60.326 60.000 0.00 0.00 0.00 4.45
3529 5194 0.325671 GATCCCTCTGTGTCTCCCCA 60.326 60.000 0.00 0.00 0.00 4.96
3530 5195 0.325671 TGATCCCTCTGTGTCTCCCC 60.326 60.000 0.00 0.00 0.00 4.81
3531 5196 1.415659 CATGATCCCTCTGTGTCTCCC 59.584 57.143 0.00 0.00 0.00 4.30
3532 5197 1.202627 GCATGATCCCTCTGTGTCTCC 60.203 57.143 0.00 0.00 0.00 3.71
3533 5198 1.537776 CGCATGATCCCTCTGTGTCTC 60.538 57.143 0.00 0.00 0.00 3.36
3539 5204 0.106335 AGAAGCGCATGATCCCTCTG 59.894 55.000 11.47 0.00 0.00 3.35
3540 5205 0.835941 AAGAAGCGCATGATCCCTCT 59.164 50.000 11.47 0.00 0.00 3.69
3751 5445 7.951530 ATTGTTAAGGCAAACTTTGATGAAG 57.048 32.000 5.65 0.00 40.64 3.02
3790 5647 1.393539 CTATTGTCGGCAACCAAGTCG 59.606 52.381 3.66 0.00 37.44 4.18
3793 5650 3.334691 TCTTCTATTGTCGGCAACCAAG 58.665 45.455 3.66 7.70 37.44 3.61
3976 5839 5.809464 TCTTGTGAATGTGCATTTATAGCG 58.191 37.500 0.00 0.00 33.85 4.26
4013 5876 8.593679 GGGCTGCCCTTTTATTACAAATATATT 58.406 33.333 30.42 0.00 41.34 1.28
4014 5877 7.093945 CGGGCTGCCCTTTTATTACAAATATAT 60.094 37.037 33.39 0.00 42.67 0.86
4015 5878 6.207810 CGGGCTGCCCTTTTATTACAAATATA 59.792 38.462 33.39 0.00 42.67 0.86
4016 5879 5.010617 CGGGCTGCCCTTTTATTACAAATAT 59.989 40.000 33.39 0.00 42.67 1.28
4017 5880 4.339814 CGGGCTGCCCTTTTATTACAAATA 59.660 41.667 33.39 0.00 42.67 1.40
4018 5881 3.132111 CGGGCTGCCCTTTTATTACAAAT 59.868 43.478 33.39 0.00 42.67 2.32
4019 5882 2.494073 CGGGCTGCCCTTTTATTACAAA 59.506 45.455 33.39 0.00 42.67 2.83
4020 5883 2.096248 CGGGCTGCCCTTTTATTACAA 58.904 47.619 33.39 0.00 42.67 2.41
4021 5884 1.683629 CCGGGCTGCCCTTTTATTACA 60.684 52.381 33.39 0.00 42.67 2.41
4022 5885 1.029681 CCGGGCTGCCCTTTTATTAC 58.970 55.000 33.39 5.94 42.67 1.89
4023 5886 0.626916 ACCGGGCTGCCCTTTTATTA 59.373 50.000 33.39 0.00 42.67 0.98
4024 5887 0.970427 CACCGGGCTGCCCTTTTATT 60.970 55.000 33.39 9.66 42.67 1.40
4025 5888 1.379843 CACCGGGCTGCCCTTTTAT 60.380 57.895 33.39 12.60 42.67 1.40
4026 5889 2.034999 CACCGGGCTGCCCTTTTA 59.965 61.111 33.39 0.00 42.67 1.52
4032 5895 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
4033 5896 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
4034 5897 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
4035 5898 3.391665 GAGCTACATGCACCGGGCT 62.392 63.158 6.32 0.81 45.94 5.19
4036 5899 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
4037 5900 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
4050 5913 3.984193 ATCCCGTGCAAGCAGGAGC 62.984 63.158 15.55 0.00 42.56 4.70
4051 5914 1.817099 GATCCCGTGCAAGCAGGAG 60.817 63.158 15.55 3.15 34.13 3.69
4052 5915 2.268920 GATCCCGTGCAAGCAGGA 59.731 61.111 15.55 10.49 34.13 3.86
4053 5916 2.825836 GGATCCCGTGCAAGCAGG 60.826 66.667 0.00 7.71 0.00 4.85
4054 5917 3.197790 CGGATCCCGTGCAAGCAG 61.198 66.667 6.06 0.00 42.73 4.24
4064 5927 0.546598 ACCCAAAGTGATCGGATCCC 59.453 55.000 15.06 3.87 0.00 3.85
4065 5928 1.486726 AGACCCAAAGTGATCGGATCC 59.513 52.381 15.06 0.00 0.00 3.36
4066 5929 2.990066 AGACCCAAAGTGATCGGATC 57.010 50.000 11.07 11.07 0.00 3.36
4067 5930 5.148502 ACTATAGACCCAAAGTGATCGGAT 58.851 41.667 6.78 0.00 0.00 4.18
4068 5931 4.543689 ACTATAGACCCAAAGTGATCGGA 58.456 43.478 6.78 0.00 0.00 4.55
4069 5932 4.939052 ACTATAGACCCAAAGTGATCGG 57.061 45.455 6.78 0.00 0.00 4.18
4070 5933 5.450171 CGTACTATAGACCCAAAGTGATCG 58.550 45.833 6.78 0.00 0.00 3.69
4071 5934 5.221130 GCGTACTATAGACCCAAAGTGATC 58.779 45.833 6.78 0.00 0.00 2.92
4072 5935 4.647853 TGCGTACTATAGACCCAAAGTGAT 59.352 41.667 6.78 0.00 0.00 3.06
4073 5936 4.018490 TGCGTACTATAGACCCAAAGTGA 58.982 43.478 6.78 0.00 0.00 3.41
4074 5937 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
4075 5938 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
4076 5939 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
4077 5940 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
4078 5941 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
4079 5942 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
4080 5943 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
4081 5944 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
4082 5945 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
4083 5946 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
4084 5947 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
4085 5948 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
4086 5949 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
4087 5950 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
4088 5951 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
4089 5952 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
4090 5953 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
4091 5954 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
4092 5955 1.463674 AAATGTAGGGAAAGGCTGCG 58.536 50.000 0.00 0.00 0.00 5.18
4093 5956 3.954258 ACATAAATGTAGGGAAAGGCTGC 59.046 43.478 0.00 0.00 39.68 5.25
4094 5957 7.054124 TCTTACATAAATGTAGGGAAAGGCTG 58.946 38.462 11.08 0.00 43.44 4.85
4095 5958 7.208064 TCTTACATAAATGTAGGGAAAGGCT 57.792 36.000 11.08 0.00 43.44 4.58
4096 5959 6.486993 CCTCTTACATAAATGTAGGGAAAGGC 59.513 42.308 11.08 0.00 43.44 4.35
4097 5960 6.486993 GCCTCTTACATAAATGTAGGGAAAGG 59.513 42.308 11.08 11.17 43.44 3.11
4098 5961 7.227512 CAGCCTCTTACATAAATGTAGGGAAAG 59.772 40.741 11.08 4.84 43.44 2.62
4099 5962 7.054124 CAGCCTCTTACATAAATGTAGGGAAA 58.946 38.462 11.08 0.00 43.44 3.13
4100 5963 6.157994 ACAGCCTCTTACATAAATGTAGGGAA 59.842 38.462 11.08 0.00 43.44 3.97
4101 5964 5.665812 ACAGCCTCTTACATAAATGTAGGGA 59.334 40.000 11.08 8.97 43.44 4.20
4102 5965 5.930135 ACAGCCTCTTACATAAATGTAGGG 58.070 41.667 11.08 11.20 43.44 3.53
4103 5966 7.679638 GCAAACAGCCTCTTACATAAATGTAGG 60.680 40.741 6.02 6.02 39.79 3.18
4104 5967 7.148255 TGCAAACAGCCTCTTACATAAATGTAG 60.148 37.037 3.24 0.00 42.54 2.74
4105 5968 6.657117 TGCAAACAGCCTCTTACATAAATGTA 59.343 34.615 0.00 0.00 44.83 2.29
4106 5969 5.476599 TGCAAACAGCCTCTTACATAAATGT 59.523 36.000 0.63 0.63 44.83 2.71
4107 5970 5.953183 TGCAAACAGCCTCTTACATAAATG 58.047 37.500 0.00 0.00 44.83 2.32
4108 5971 5.126061 CCTGCAAACAGCCTCTTACATAAAT 59.874 40.000 0.00 0.00 43.02 1.40
4109 5972 4.458989 CCTGCAAACAGCCTCTTACATAAA 59.541 41.667 0.00 0.00 43.02 1.40
4110 5973 4.009675 CCTGCAAACAGCCTCTTACATAA 58.990 43.478 0.00 0.00 43.02 1.90
4111 5974 3.263170 TCCTGCAAACAGCCTCTTACATA 59.737 43.478 0.00 0.00 43.02 2.29
4112 5975 2.040278 TCCTGCAAACAGCCTCTTACAT 59.960 45.455 0.00 0.00 43.02 2.29
4113 5976 1.419762 TCCTGCAAACAGCCTCTTACA 59.580 47.619 0.00 0.00 43.02 2.41
4114 5977 1.807142 GTCCTGCAAACAGCCTCTTAC 59.193 52.381 0.00 0.00 43.02 2.34
4115 5978 1.699634 AGTCCTGCAAACAGCCTCTTA 59.300 47.619 2.10 0.00 43.02 2.10
4116 5979 0.475906 AGTCCTGCAAACAGCCTCTT 59.524 50.000 2.10 0.00 43.02 2.85
4117 5980 0.475906 AAGTCCTGCAAACAGCCTCT 59.524 50.000 2.10 0.00 43.02 3.69
4118 5981 0.595095 CAAGTCCTGCAAACAGCCTC 59.405 55.000 2.10 0.00 43.02 4.70
4119 5982 0.183492 TCAAGTCCTGCAAACAGCCT 59.817 50.000 2.10 0.00 43.02 4.58
4120 5983 1.032014 TTCAAGTCCTGCAAACAGCC 58.968 50.000 2.10 0.00 43.02 4.85
4121 5984 1.269257 GGTTCAAGTCCTGCAAACAGC 60.269 52.381 2.10 0.00 43.02 4.40
4122 5985 1.338020 GGGTTCAAGTCCTGCAAACAG 59.662 52.381 2.10 0.00 44.05 3.16
4123 5986 1.341482 TGGGTTCAAGTCCTGCAAACA 60.341 47.619 2.10 0.00 0.00 2.83
4124 5987 1.338020 CTGGGTTCAAGTCCTGCAAAC 59.662 52.381 0.00 0.00 0.00 2.93
4125 5988 1.691196 CTGGGTTCAAGTCCTGCAAA 58.309 50.000 0.00 0.00 0.00 3.68
4126 5989 0.823356 GCTGGGTTCAAGTCCTGCAA 60.823 55.000 0.00 0.00 44.19 4.08
4127 5990 1.228245 GCTGGGTTCAAGTCCTGCA 60.228 57.895 0.00 0.00 44.19 4.41
4128 5991 0.538287 AAGCTGGGTTCAAGTCCTGC 60.538 55.000 0.00 0.00 44.82 4.85
4129 5992 1.986882 AAAGCTGGGTTCAAGTCCTG 58.013 50.000 0.00 0.00 0.00 3.86
4130 5993 2.224793 GGTAAAGCTGGGTTCAAGTCCT 60.225 50.000 0.00 0.00 0.00 3.85
4131 5994 2.160205 GGTAAAGCTGGGTTCAAGTCC 58.840 52.381 0.00 0.00 0.00 3.85
4132 5995 2.552743 GTGGTAAAGCTGGGTTCAAGTC 59.447 50.000 0.00 0.00 0.00 3.01
4133 5996 2.174854 AGTGGTAAAGCTGGGTTCAAGT 59.825 45.455 0.00 0.00 0.00 3.16
4134 5997 2.554032 CAGTGGTAAAGCTGGGTTCAAG 59.446 50.000 0.00 0.00 0.00 3.02
4135 5998 2.582052 CAGTGGTAAAGCTGGGTTCAA 58.418 47.619 0.00 0.00 0.00 2.69
4136 5999 1.817740 GCAGTGGTAAAGCTGGGTTCA 60.818 52.381 0.00 0.00 33.62 3.18
4137 6000 0.881796 GCAGTGGTAAAGCTGGGTTC 59.118 55.000 0.00 0.00 33.62 3.62
4138 6001 0.478507 AGCAGTGGTAAAGCTGGGTT 59.521 50.000 0.00 0.00 37.20 4.11
4139 6002 0.036875 GAGCAGTGGTAAAGCTGGGT 59.963 55.000 0.00 0.00 39.02 4.51
4140 6003 0.678048 GGAGCAGTGGTAAAGCTGGG 60.678 60.000 0.00 0.00 39.02 4.45
4141 6004 0.036732 TGGAGCAGTGGTAAAGCTGG 59.963 55.000 0.00 0.00 39.02 4.85
4142 6005 1.808945 CTTGGAGCAGTGGTAAAGCTG 59.191 52.381 0.00 0.00 39.02 4.24
4143 6006 1.271597 CCTTGGAGCAGTGGTAAAGCT 60.272 52.381 10.38 0.00 42.17 3.74
4144 6007 1.168714 CCTTGGAGCAGTGGTAAAGC 58.831 55.000 10.38 0.00 0.00 3.51
4145 6008 1.168714 GCCTTGGAGCAGTGGTAAAG 58.831 55.000 0.00 2.56 0.00 1.85
4146 6009 0.771127 AGCCTTGGAGCAGTGGTAAA 59.229 50.000 0.00 0.00 34.23 2.01
4147 6010 0.324943 GAGCCTTGGAGCAGTGGTAA 59.675 55.000 0.00 0.00 34.23 2.85
4148 6011 1.553690 GGAGCCTTGGAGCAGTGGTA 61.554 60.000 0.00 0.00 34.23 3.25
4149 6012 2.753029 GAGCCTTGGAGCAGTGGT 59.247 61.111 0.00 0.00 34.23 4.16
4150 6013 2.045536 GGAGCCTTGGAGCAGTGG 60.046 66.667 0.00 0.00 34.23 4.00
4151 6014 2.045536 GGGAGCCTTGGAGCAGTG 60.046 66.667 0.00 0.00 34.23 3.66
4152 6015 3.334054 GGGGAGCCTTGGAGCAGT 61.334 66.667 0.00 0.00 34.23 4.40
4153 6016 2.549169 GAAGGGGAGCCTTGGAGCAG 62.549 65.000 0.00 0.00 34.23 4.24
4154 6017 2.532715 AAGGGGAGCCTTGGAGCA 60.533 61.111 0.00 0.00 34.23 4.26
4155 6018 2.273776 GAAGGGGAGCCTTGGAGC 59.726 66.667 0.00 0.00 0.00 4.70
4156 6019 0.976073 TACGAAGGGGAGCCTTGGAG 60.976 60.000 0.00 0.00 31.55 3.86
4157 6020 0.545787 TTACGAAGGGGAGCCTTGGA 60.546 55.000 0.00 0.00 31.55 3.53
4158 6021 0.326927 TTTACGAAGGGGAGCCTTGG 59.673 55.000 0.00 0.00 0.00 3.61
4159 6022 2.017049 CATTTACGAAGGGGAGCCTTG 58.983 52.381 0.00 0.00 0.00 3.61
4160 6023 1.913419 TCATTTACGAAGGGGAGCCTT 59.087 47.619 0.00 0.00 0.00 4.35
4161 6024 1.580059 TCATTTACGAAGGGGAGCCT 58.420 50.000 0.00 0.00 0.00 4.58
4162 6025 2.104963 AGATCATTTACGAAGGGGAGCC 59.895 50.000 0.00 0.00 0.00 4.70
4163 6026 3.070302 AGAGATCATTTACGAAGGGGAGC 59.930 47.826 0.00 0.00 0.00 4.70
4164 6027 4.946478 AGAGATCATTTACGAAGGGGAG 57.054 45.455 0.00 0.00 0.00 4.30
4165 6028 9.763837 TTATATAGAGATCATTTACGAAGGGGA 57.236 33.333 0.00 0.00 0.00 4.81
4263 6126 3.149981 TGTCAATTTATGAACCGCCACA 58.850 40.909 0.00 0.00 40.50 4.17
4278 6141 9.146984 CAGAGAAACAATGCAAAATATGTCAAT 57.853 29.630 0.00 0.00 0.00 2.57
4358 6221 2.935238 GCTTGTATCCTCCGCTTGAACA 60.935 50.000 0.00 0.00 0.00 3.18
4367 6230 1.300233 CTCGCCGCTTGTATCCTCC 60.300 63.158 0.00 0.00 0.00 4.30
4427 6290 7.775120 AGTAAAATGCATGTTTAGCTGCTTAT 58.225 30.769 7.58 0.00 39.16 1.73
4429 6292 6.029346 AGTAAAATGCATGTTTAGCTGCTT 57.971 33.333 7.58 0.00 39.16 3.91
4446 6309 9.186837 TGGTTAATCACACTTTTGGTAGTAAAA 57.813 29.630 0.00 0.00 0.00 1.52
4456 6319 3.636300 TGCTGCTGGTTAATCACACTTTT 59.364 39.130 0.00 0.00 0.00 2.27
4457 6320 3.221771 TGCTGCTGGTTAATCACACTTT 58.778 40.909 0.00 0.00 0.00 2.66
4476 6339 0.388520 GGCAGGTTGAACCGAAATGC 60.389 55.000 15.53 15.53 44.90 3.56
4503 6366 0.837272 GCAGTTGGTATGGAGGGCTA 59.163 55.000 0.00 0.00 0.00 3.93
4521 6384 2.092429 TGAATGAGTATCCCCACAAGGC 60.092 50.000 0.00 0.00 0.00 4.35
4568 6431 1.077787 GACGATGGTGATGCCCCAA 60.078 57.895 0.00 0.00 35.14 4.12
4571 6434 2.588877 CCGACGATGGTGATGCCC 60.589 66.667 0.00 0.00 36.04 5.36
4577 6440 0.806102 CTTACTGGCCGACGATGGTG 60.806 60.000 0.00 0.00 0.00 4.17
4582 6445 2.967397 CACCTTACTGGCCGACGA 59.033 61.111 0.00 0.00 40.22 4.20
4594 6457 3.135530 GGAGTTGATCCTGATAGCACCTT 59.864 47.826 0.00 0.00 45.64 3.50
4684 6559 7.743838 GCGCACATGCTTTTTGAAATAAAATAA 59.256 29.630 0.30 0.00 39.32 1.40
4685 6560 7.095481 TGCGCACATGCTTTTTGAAATAAAATA 60.095 29.630 5.66 0.00 39.32 1.40
4686 6561 6.079120 GCGCACATGCTTTTTGAAATAAAAT 58.921 32.000 0.30 0.00 39.32 1.82
4687 6562 5.007039 TGCGCACATGCTTTTTGAAATAAAA 59.993 32.000 5.66 0.00 39.32 1.52
4688 6563 4.509230 TGCGCACATGCTTTTTGAAATAAA 59.491 33.333 5.66 0.00 39.32 1.40
4713 6588 9.871238 GAGTAACACCTAAATAGAGTGAAATCA 57.129 33.333 12.83 0.00 35.47 2.57
4718 6593 6.500336 AGGGAGTAACACCTAAATAGAGTGA 58.500 40.000 12.83 0.00 34.71 3.41
4722 6597 5.845734 TGGAGGGAGTAACACCTAAATAGA 58.154 41.667 0.00 0.00 37.18 1.98
4774 6649 5.532032 TCCGTATGTAGTCCGTATTGATTGA 59.468 40.000 0.00 0.00 0.00 2.57
4775 6650 5.765176 TCCGTATGTAGTCCGTATTGATTG 58.235 41.667 0.00 0.00 0.00 2.67
4776 6651 6.015688 ACATCCGTATGTAGTCCGTATTGATT 60.016 38.462 0.00 0.00 44.66 2.57
4777 6652 5.475909 ACATCCGTATGTAGTCCGTATTGAT 59.524 40.000 0.00 0.00 44.66 2.57
4895 6773 5.598830 ACAACCGGAGATTCATGAGTACTAT 59.401 40.000 9.46 0.00 0.00 2.12
5141 7019 7.561251 TGATATCATAACCAGAGGAAAACGAA 58.439 34.615 0.00 0.00 0.00 3.85
5159 7037 7.277539 CGGGCTTGCTTTTTAATTTTGATATCA 59.722 33.333 0.00 0.00 0.00 2.15
5169 7047 0.108851 CGCCGGGCTTGCTTTTTAAT 60.109 50.000 18.34 0.00 0.00 1.40
5171 7049 1.858372 GACGCCGGGCTTGCTTTTTA 61.858 55.000 18.34 0.00 0.00 1.52
5173 7051 3.670377 GACGCCGGGCTTGCTTTT 61.670 61.111 18.34 0.00 0.00 2.27
5191 7077 5.578727 GGTTCCGCTCAATAGATGATATCAC 59.421 44.000 7.78 2.47 37.44 3.06
5213 7099 1.678635 CCCATGTGTTGCATCGGGT 60.679 57.895 0.00 0.00 39.24 5.28
5216 7102 0.173935 ATTGCCCATGTGTTGCATCG 59.826 50.000 0.00 0.00 35.19 3.84
5220 7106 1.205417 AGCTAATTGCCCATGTGTTGC 59.795 47.619 0.00 0.00 44.23 4.17
5335 7221 3.071602 TCATACTCCCCTTTAGCATGAGC 59.928 47.826 0.00 0.00 42.56 4.26
5338 7224 3.069586 TCGTCATACTCCCCTTTAGCATG 59.930 47.826 0.00 0.00 0.00 4.06
5339 7225 3.305720 TCGTCATACTCCCCTTTAGCAT 58.694 45.455 0.00 0.00 0.00 3.79
5340 7226 2.693591 CTCGTCATACTCCCCTTTAGCA 59.306 50.000 0.00 0.00 0.00 3.49
5341 7227 2.546162 GCTCGTCATACTCCCCTTTAGC 60.546 54.545 0.00 0.00 0.00 3.09
5372 7258 5.125417 TGCTGCAATATTTCCACCTCTAAAC 59.875 40.000 0.00 0.00 0.00 2.01
5373 7259 5.260424 TGCTGCAATATTTCCACCTCTAAA 58.740 37.500 0.00 0.00 0.00 1.85
5374 7260 4.854173 TGCTGCAATATTTCCACCTCTAA 58.146 39.130 0.00 0.00 0.00 2.10
5375 7261 4.502105 TGCTGCAATATTTCCACCTCTA 57.498 40.909 0.00 0.00 0.00 2.43
5376 7262 3.370840 TGCTGCAATATTTCCACCTCT 57.629 42.857 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.