Multiple sequence alignment - TraesCS6D01G291100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G291100 chr6D 100.000 5355 0 0 1 5355 401305151 401310505 0.000000e+00 9889.0
1 TraesCS6D01G291100 chr6A 96.467 1217 35 3 1014 2222 547826517 547827733 0.000000e+00 2002.0
2 TraesCS6D01G291100 chr6A 94.424 1094 38 11 3212 4286 547828591 547829680 0.000000e+00 1661.0
3 TraesCS6D01G291100 chr6A 92.821 599 36 3 2526 3118 547827995 547828592 0.000000e+00 861.0
4 TraesCS6D01G291100 chr6A 92.857 560 25 7 1 554 547825744 547826294 0.000000e+00 798.0
5 TraesCS6D01G291100 chr6A 88.084 663 48 12 4285 4940 547829712 547830350 0.000000e+00 758.0
6 TraesCS6D01G291100 chr6A 94.949 198 6 1 535 732 547826308 547826501 1.870000e-79 307.0
7 TraesCS6D01G291100 chr6A 97.076 171 5 0 2354 2524 547827733 547827903 6.790000e-74 289.0
8 TraesCS6D01G291100 chr6A 94.444 162 7 1 5009 5168 547830443 547830604 1.150000e-61 248.0
9 TraesCS6D01G291100 chr6A 95.283 106 4 1 3112 3216 155803857 155803752 3.320000e-37 167.0
10 TraesCS6D01G291100 chr6B 96.857 1018 26 4 998 2013 601880288 601881301 0.000000e+00 1698.0
11 TraesCS6D01G291100 chr6B 93.486 1090 56 7 3212 4286 601882822 601883911 0.000000e+00 1605.0
12 TraesCS6D01G291100 chr6B 89.780 998 53 23 1 976 601878996 601879966 0.000000e+00 1232.0
13 TraesCS6D01G291100 chr6B 89.655 638 39 13 4285 4909 601883943 601884566 0.000000e+00 787.0
14 TraesCS6D01G291100 chr6B 90.815 577 33 11 2526 3092 601881997 601882563 0.000000e+00 754.0
15 TraesCS6D01G291100 chr6B 97.403 308 8 0 2012 2319 601881425 601881732 4.750000e-145 525.0
16 TraesCS6D01G291100 chr6B 89.098 266 20 3 2862 3118 601882558 601882823 6.690000e-84 322.0
17 TraesCS6D01G291100 chr6B 96.739 184 6 0 2348 2531 601881731 601881914 1.870000e-79 307.0
18 TraesCS6D01G291100 chr7A 86.409 699 82 11 995 1682 211729958 211730654 0.000000e+00 752.0
19 TraesCS6D01G291100 chr7B 88.130 615 71 2 1071 1684 119213904 119214517 0.000000e+00 730.0
20 TraesCS6D01G291100 chr7B 86.207 145 15 4 5180 5320 195673774 195673631 9.290000e-33 152.0
21 TraesCS6D01G291100 chr7D 81.777 889 126 25 995 1861 156809644 156810518 0.000000e+00 712.0
22 TraesCS6D01G291100 chr7D 94.286 105 6 0 3117 3221 168579919 168580023 1.540000e-35 161.0
23 TraesCS6D01G291100 chr7D 100.000 36 0 0 5289 5324 385655208 385655173 3.460000e-07 67.6
24 TraesCS6D01G291100 chr2D 98.077 104 1 1 3117 3220 267347246 267347144 4.260000e-41 180.0
25 TraesCS6D01G291100 chr2D 84.967 153 8 6 5182 5319 554045946 554046098 2.010000e-29 141.0
26 TraesCS6D01G291100 chr5A 97.059 102 3 0 3115 3216 84159295 84159396 7.130000e-39 172.0
27 TraesCS6D01G291100 chr5A 87.209 86 8 3 4160 4243 33929242 33929158 1.590000e-15 95.3
28 TraesCS6D01G291100 chr2A 96.190 105 3 1 3113 3216 68155925 68155821 2.560000e-38 171.0
29 TraesCS6D01G291100 chr2A 94.340 106 6 0 3113 3218 660286771 660286876 4.290000e-36 163.0
30 TraesCS6D01G291100 chr2A 88.095 84 8 2 4161 4242 102688041 102688124 1.230000e-16 99.0
31 TraesCS6D01G291100 chr5D 94.444 108 5 1 3107 3214 558970426 558970532 1.190000e-36 165.0
32 TraesCS6D01G291100 chr5D 86.207 87 10 2 4160 4244 464070949 464070863 5.710000e-15 93.5
33 TraesCS6D01G291100 chr5D 86.047 86 9 3 4160 4243 43962164 43962080 7.390000e-14 89.8
34 TraesCS6D01G291100 chr5D 82.796 93 14 2 4161 4251 297499910 297499818 1.240000e-11 82.4
35 TraesCS6D01G291100 chr5B 95.192 104 5 0 3113 3216 444768562 444768665 1.190000e-36 165.0
36 TraesCS6D01G291100 chr5B 84.884 86 11 2 4160 4243 50469128 50469213 9.560000e-13 86.1
37 TraesCS6D01G291100 chr1A 93.694 111 4 3 3106 3214 77163575 77163684 4.290000e-36 163.0
38 TraesCS6D01G291100 chr1D 86.806 144 16 1 5180 5320 225202679 225202536 2.000000e-34 158.0
39 TraesCS6D01G291100 chr1D 85.256 156 8 4 5180 5320 229908772 229908927 4.320000e-31 147.0
40 TraesCS6D01G291100 chr4D 84.516 155 9 6 5180 5319 182749773 182749927 7.230000e-29 139.0
41 TraesCS6D01G291100 chr1B 88.764 89 8 2 4161 4247 411570500 411570412 2.040000e-19 108.0
42 TraesCS6D01G291100 chr1B 97.436 39 1 0 5286 5324 417172318 417172356 3.460000e-07 67.6
43 TraesCS6D01G291100 chrUn 84.615 91 6 7 4159 4245 10131425 10131511 3.440000e-12 84.2
44 TraesCS6D01G291100 chr4B 100.000 36 0 0 5289 5324 93116149 93116114 3.460000e-07 67.6
45 TraesCS6D01G291100 chr4B 100.000 36 0 0 5289 5324 596372071 596372106 3.460000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G291100 chr6D 401305151 401310505 5354 False 9889.00 9889 100.000000 1 5355 1 chr6D.!!$F1 5354
1 TraesCS6D01G291100 chr6A 547825744 547830604 4860 False 865.50 2002 93.890250 1 5168 8 chr6A.!!$F1 5167
2 TraesCS6D01G291100 chr6B 601878996 601884566 5570 False 903.75 1698 92.979125 1 4909 8 chr6B.!!$F1 4908
3 TraesCS6D01G291100 chr7A 211729958 211730654 696 False 752.00 752 86.409000 995 1682 1 chr7A.!!$F1 687
4 TraesCS6D01G291100 chr7B 119213904 119214517 613 False 730.00 730 88.130000 1071 1684 1 chr7B.!!$F1 613
5 TraesCS6D01G291100 chr7D 156809644 156810518 874 False 712.00 712 81.777000 995 1861 1 chr7D.!!$F1 866

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
880 945 0.918983 CCTGCAACCATCTCCCCTTA 59.081 55.0 0.0 0.0 0.00 2.69 F
1572 1957 0.961358 AGGACACCGTCTCCTTCTCG 60.961 60.0 0.0 0.0 34.11 4.04 F
2573 3181 0.693049 ACCCGCACTCCATTTTCTCT 59.307 50.0 0.0 0.0 0.00 3.10 F
3215 4067 0.042131 TTGGGACGGAGGGAGTATGT 59.958 55.0 0.0 0.0 0.00 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2396 2914 1.401905 GCAAGAACATCCATTCCGTCC 59.598 52.381 0.0 0.0 0.0 4.79 R
3196 4048 0.042131 ACATACTCCCTCCGTCCCAA 59.958 55.000 0.0 0.0 0.0 4.12 R
3868 4723 0.320946 CCTCAACGCCGAAACCCTTA 60.321 55.000 0.0 0.0 0.0 2.69 R
5000 5936 0.106708 GGTGCCGCAATCATAGGAGA 59.893 55.000 0.0 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 39 2.102578 GGACACCAAATAAGGCTGCAT 58.897 47.619 0.50 0.00 0.00 3.96
90 96 7.873739 AAAGAAGTTTTGTTGTGAGAAGTTG 57.126 32.000 0.00 0.00 0.00 3.16
91 97 5.954335 AGAAGTTTTGTTGTGAGAAGTTGG 58.046 37.500 0.00 0.00 0.00 3.77
92 98 5.710099 AGAAGTTTTGTTGTGAGAAGTTGGA 59.290 36.000 0.00 0.00 0.00 3.53
93 99 5.975693 AGTTTTGTTGTGAGAAGTTGGAA 57.024 34.783 0.00 0.00 0.00 3.53
94 100 5.709966 AGTTTTGTTGTGAGAAGTTGGAAC 58.290 37.500 0.00 0.00 0.00 3.62
297 310 4.574828 AGCGGCACTACATTTAATAACCAG 59.425 41.667 1.45 0.00 0.00 4.00
368 384 4.821805 AGTGCATATTTTCCGAATTCCGAT 59.178 37.500 0.00 0.00 41.76 4.18
392 408 6.698008 AGCCAATCGATACATGAAAATTGA 57.302 33.333 0.00 0.00 0.00 2.57
540 572 1.638529 TGGCAACCACCCCAATAAAG 58.361 50.000 0.00 0.00 0.00 1.85
709 774 6.348540 CGTCTTGTCAATTTTTAAGAGGAGGG 60.349 42.308 0.00 0.00 37.27 4.30
845 910 4.002006 AGGCACCAACCTCTTCCA 57.998 55.556 0.00 0.00 33.62 3.53
846 911 2.479562 AGGCACCAACCTCTTCCAT 58.520 52.632 0.00 0.00 33.62 3.41
880 945 0.918983 CCTGCAACCATCTCCCCTTA 59.081 55.000 0.00 0.00 0.00 2.69
885 950 4.792068 TGCAACCATCTCCCCTTAATAAG 58.208 43.478 0.00 0.00 0.00 1.73
924 990 6.994421 ATCTCCTCCTTCCTTTTATCTCTC 57.006 41.667 0.00 0.00 0.00 3.20
989 1055 3.480133 CCCCGGAACCCTAGCCAG 61.480 72.222 0.73 0.00 0.00 4.85
990 1056 4.176752 CCCGGAACCCTAGCCAGC 62.177 72.222 0.73 0.00 0.00 4.85
991 1057 4.176752 CCGGAACCCTAGCCAGCC 62.177 72.222 0.00 0.00 0.00 4.85
992 1058 3.399181 CGGAACCCTAGCCAGCCA 61.399 66.667 0.00 0.00 0.00 4.75
993 1059 2.966732 CGGAACCCTAGCCAGCCAA 61.967 63.158 0.00 0.00 0.00 4.52
1572 1957 0.961358 AGGACACCGTCTCCTTCTCG 60.961 60.000 0.00 0.00 34.11 4.04
1794 2179 2.591715 GATGGGATGGGAACGGCG 60.592 66.667 4.80 4.80 0.00 6.46
1878 2263 7.010160 TGAAGGTAATTTCAAATCCCTCTTGT 58.990 34.615 2.55 0.00 34.32 3.16
1880 2265 7.232118 AGGTAATTTCAAATCCCTCTTGTTG 57.768 36.000 0.00 0.00 0.00 3.33
1889 2275 3.586470 TCCCTCTTGTTGGTTTTGCTA 57.414 42.857 0.00 0.00 0.00 3.49
1930 2316 2.213499 GAGGGTTGATTAGCATCGTGG 58.787 52.381 0.00 0.00 31.08 4.94
2222 2740 8.591114 AGCTACAATGTTTACTTAGGAGTAGA 57.409 34.615 0.00 0.00 39.43 2.59
2248 2766 5.552870 TCATCTTCCCTAGCTTATTGTCC 57.447 43.478 0.00 0.00 0.00 4.02
2249 2767 4.968719 TCATCTTCCCTAGCTTATTGTCCA 59.031 41.667 0.00 0.00 0.00 4.02
2312 2830 2.997986 CCTGCATTTGTGAGCCAATTTC 59.002 45.455 0.00 0.00 31.81 2.17
2317 2835 4.562143 GCATTTGTGAGCCAATTTCTCCTT 60.562 41.667 2.92 0.00 31.81 3.36
2318 2836 5.544650 CATTTGTGAGCCAATTTCTCCTTT 58.455 37.500 2.92 0.00 31.81 3.11
2319 2837 4.589216 TTGTGAGCCAATTTCTCCTTTG 57.411 40.909 2.92 0.00 0.00 2.77
2320 2838 3.831323 TGTGAGCCAATTTCTCCTTTGA 58.169 40.909 2.92 0.00 0.00 2.69
2321 2839 4.214310 TGTGAGCCAATTTCTCCTTTGAA 58.786 39.130 2.92 0.00 0.00 2.69
2322 2840 4.834496 TGTGAGCCAATTTCTCCTTTGAAT 59.166 37.500 2.92 0.00 0.00 2.57
2323 2841 5.166398 GTGAGCCAATTTCTCCTTTGAATG 58.834 41.667 2.92 0.00 0.00 2.67
2324 2842 4.179298 GAGCCAATTTCTCCTTTGAATGC 58.821 43.478 0.00 0.00 0.00 3.56
2325 2843 2.925563 GCCAATTTCTCCTTTGAATGCG 59.074 45.455 0.00 0.00 0.00 4.73
2326 2844 3.367292 GCCAATTTCTCCTTTGAATGCGA 60.367 43.478 0.00 0.00 0.00 5.10
2327 2845 4.418392 CCAATTTCTCCTTTGAATGCGAG 58.582 43.478 0.00 0.00 0.00 5.03
2328 2846 4.418392 CAATTTCTCCTTTGAATGCGAGG 58.582 43.478 0.00 0.00 0.00 4.63
2329 2847 2.859165 TTCTCCTTTGAATGCGAGGT 57.141 45.000 0.00 0.00 32.33 3.85
2330 2848 2.099141 TCTCCTTTGAATGCGAGGTG 57.901 50.000 0.00 0.00 32.33 4.00
2331 2849 1.623311 TCTCCTTTGAATGCGAGGTGA 59.377 47.619 0.00 0.00 32.39 4.02
2332 2850 2.237143 TCTCCTTTGAATGCGAGGTGAT 59.763 45.455 0.00 0.00 30.49 3.06
2333 2851 3.450817 TCTCCTTTGAATGCGAGGTGATA 59.549 43.478 0.00 0.00 30.49 2.15
2334 2852 4.081142 TCTCCTTTGAATGCGAGGTGATAA 60.081 41.667 0.00 0.00 30.49 1.75
2335 2853 3.938963 TCCTTTGAATGCGAGGTGATAAC 59.061 43.478 0.00 0.00 32.33 1.89
2336 2854 3.689161 CCTTTGAATGCGAGGTGATAACA 59.311 43.478 0.00 0.00 0.00 2.41
2337 2855 4.336433 CCTTTGAATGCGAGGTGATAACAT 59.664 41.667 0.00 0.00 0.00 2.71
2338 2856 5.527214 CCTTTGAATGCGAGGTGATAACATA 59.473 40.000 0.00 0.00 0.00 2.29
2339 2857 6.038161 CCTTTGAATGCGAGGTGATAACATAA 59.962 38.462 0.00 0.00 0.00 1.90
2340 2858 6.603237 TTGAATGCGAGGTGATAACATAAG 57.397 37.500 0.00 0.00 0.00 1.73
2341 2859 4.511454 TGAATGCGAGGTGATAACATAAGC 59.489 41.667 0.00 0.00 0.00 3.09
2342 2860 3.819564 TGCGAGGTGATAACATAAGCT 57.180 42.857 0.00 0.00 0.00 3.74
2343 2861 4.137116 TGCGAGGTGATAACATAAGCTT 57.863 40.909 3.48 3.48 0.00 3.74
2344 2862 3.871006 TGCGAGGTGATAACATAAGCTTG 59.129 43.478 9.86 0.00 0.00 4.01
2345 2863 3.303395 GCGAGGTGATAACATAAGCTTGC 60.303 47.826 9.86 0.27 40.49 4.01
2346 2864 3.871006 CGAGGTGATAACATAAGCTTGCA 59.129 43.478 9.86 0.00 0.00 4.08
2396 2914 6.432783 TCCTCAAATTATGTTTGGTGTAGGTG 59.567 38.462 5.81 0.00 0.00 4.00
2474 2992 2.653234 TTGCAAATGGCCCAATTGTT 57.347 40.000 12.92 0.00 43.89 2.83
2573 3181 0.693049 ACCCGCACTCCATTTTCTCT 59.307 50.000 0.00 0.00 0.00 3.10
2637 3245 7.712205 AGATTTGCCTGACATTAATAATTTGCC 59.288 33.333 0.00 0.00 0.00 4.52
2646 3254 6.738114 ACATTAATAATTTGCCGGATCTGTG 58.262 36.000 5.05 0.00 0.00 3.66
2684 3292 5.352569 CCTTGCTTGTTAGTCTATCACTTGG 59.647 44.000 0.00 0.00 36.43 3.61
2690 3298 4.081642 TGTTAGTCTATCACTTGGTGGCTC 60.082 45.833 0.00 0.00 36.43 4.70
2726 3334 7.280652 GGTGGCTTGAATTATATGTTTGCAATT 59.719 33.333 0.00 0.00 0.00 2.32
2769 3377 4.476113 TGGATTGGAGACTTGGATCTGAAT 59.524 41.667 0.00 0.00 0.00 2.57
2770 3378 5.667172 TGGATTGGAGACTTGGATCTGAATA 59.333 40.000 0.00 0.00 0.00 1.75
2771 3379 5.994668 GGATTGGAGACTTGGATCTGAATAC 59.005 44.000 0.00 0.00 0.00 1.89
2892 3501 6.432403 ACCCCAAATATCACATTGTTTTGT 57.568 33.333 9.60 0.00 0.00 2.83
2905 3514 7.980662 TCACATTGTTTTGTCATGTCAATTTCT 59.019 29.630 6.21 0.00 0.00 2.52
2920 3529 6.072175 TGTCAATTTCTGCTAACCGCTAAAAT 60.072 34.615 0.00 0.00 40.11 1.82
2931 3540 1.667212 CCGCTAAAATACCCGTTCACC 59.333 52.381 0.00 0.00 0.00 4.02
2933 3542 1.667212 GCTAAAATACCCGTTCACCCG 59.333 52.381 0.00 0.00 0.00 5.28
2958 3571 5.528690 TGAAGTATGGAAATGCTATGCACTC 59.471 40.000 0.00 0.00 43.04 3.51
3010 3862 6.588204 TGACCCGATGCTAACTTTAATGTAT 58.412 36.000 0.00 0.00 0.00 2.29
3064 3916 2.775032 TTCGCGGGCAGTTACAGTCC 62.775 60.000 6.13 0.00 0.00 3.85
3072 3924 4.499357 CGGGCAGTTACAGTCCTCTTATAC 60.499 50.000 0.00 0.00 0.00 1.47
3094 3946 4.761739 ACATGGCCGTGATTATTTCCATAG 59.238 41.667 31.74 0.00 33.42 2.23
3126 3978 7.967908 ACCTATTGTGAATAATACTCCCTCTG 58.032 38.462 0.00 0.00 0.00 3.35
3127 3979 7.569111 ACCTATTGTGAATAATACTCCCTCTGT 59.431 37.037 0.00 0.00 0.00 3.41
3128 3980 8.091449 CCTATTGTGAATAATACTCCCTCTGTC 58.909 40.741 0.00 0.00 0.00 3.51
3129 3981 5.871396 TGTGAATAATACTCCCTCTGTCC 57.129 43.478 0.00 0.00 0.00 4.02
3130 3982 4.654262 TGTGAATAATACTCCCTCTGTCCC 59.346 45.833 0.00 0.00 0.00 4.46
3131 3983 4.654262 GTGAATAATACTCCCTCTGTCCCA 59.346 45.833 0.00 0.00 0.00 4.37
3132 3984 5.130477 GTGAATAATACTCCCTCTGTCCCAA 59.870 44.000 0.00 0.00 0.00 4.12
3133 3985 5.729229 TGAATAATACTCCCTCTGTCCCAAA 59.271 40.000 0.00 0.00 0.00 3.28
3134 3986 6.216662 TGAATAATACTCCCTCTGTCCCAAAA 59.783 38.462 0.00 0.00 0.00 2.44
3135 3987 6.848562 ATAATACTCCCTCTGTCCCAAAAT 57.151 37.500 0.00 0.00 0.00 1.82
3136 3988 7.947782 ATAATACTCCCTCTGTCCCAAAATA 57.052 36.000 0.00 0.00 0.00 1.40
3137 3989 6.652205 AATACTCCCTCTGTCCCAAAATAA 57.348 37.500 0.00 0.00 0.00 1.40
3138 3990 4.576330 ACTCCCTCTGTCCCAAAATAAG 57.424 45.455 0.00 0.00 0.00 1.73
3139 3991 3.916989 ACTCCCTCTGTCCCAAAATAAGT 59.083 43.478 0.00 0.00 0.00 2.24
3140 3992 4.263506 ACTCCCTCTGTCCCAAAATAAGTG 60.264 45.833 0.00 0.00 0.00 3.16
3141 3993 3.655777 TCCCTCTGTCCCAAAATAAGTGT 59.344 43.478 0.00 0.00 0.00 3.55
3142 3994 4.010349 CCCTCTGTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
3143 3995 4.263506 CCCTCTGTCCCAAAATAAGTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
3144 3996 4.938226 CCTCTGTCCCAAAATAAGTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
3145 3997 5.513094 CCTCTGTCCCAAAATAAGTGTCTCA 60.513 44.000 0.00 0.00 0.00 3.27
3146 3998 5.935945 TCTGTCCCAAAATAAGTGTCTCAA 58.064 37.500 0.00 0.00 0.00 3.02
3147 3999 5.763204 TCTGTCCCAAAATAAGTGTCTCAAC 59.237 40.000 0.00 0.00 0.00 3.18
3148 4000 5.690865 TGTCCCAAAATAAGTGTCTCAACT 58.309 37.500 0.00 0.00 0.00 3.16
3149 4001 6.126409 TGTCCCAAAATAAGTGTCTCAACTT 58.874 36.000 0.00 0.00 42.89 2.66
3150 4002 6.605594 TGTCCCAAAATAAGTGTCTCAACTTT 59.394 34.615 0.00 0.00 40.77 2.66
3151 4003 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
3152 4004 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
3153 4005 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
3154 4006 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
3155 4007 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
3158 4010 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
3159 4011 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
3160 4012 6.163135 AGTGTCTCAACTTTGTACTAGCTT 57.837 37.500 0.00 0.00 0.00 3.74
3161 4013 6.583562 AGTGTCTCAACTTTGTACTAGCTTT 58.416 36.000 0.00 0.00 0.00 3.51
3162 4014 7.723324 AGTGTCTCAACTTTGTACTAGCTTTA 58.277 34.615 0.00 0.00 0.00 1.85
3163 4015 7.868415 AGTGTCTCAACTTTGTACTAGCTTTAG 59.132 37.037 0.00 0.00 0.00 1.85
3164 4016 6.645415 TGTCTCAACTTTGTACTAGCTTTAGC 59.355 38.462 0.00 0.00 42.49 3.09
3165 4017 6.645415 GTCTCAACTTTGTACTAGCTTTAGCA 59.355 38.462 4.33 0.00 45.16 3.49
3166 4018 6.645415 TCTCAACTTTGTACTAGCTTTAGCAC 59.355 38.462 4.33 0.00 45.16 4.40
3167 4019 6.285224 TCAACTTTGTACTAGCTTTAGCACA 58.715 36.000 4.33 0.00 45.16 4.57
3168 4020 6.764085 TCAACTTTGTACTAGCTTTAGCACAA 59.236 34.615 4.33 0.00 45.16 3.33
3169 4021 7.281324 TCAACTTTGTACTAGCTTTAGCACAAA 59.719 33.333 12.41 12.41 45.16 2.83
3171 4023 7.190920 CTTTGTACTAGCTTTAGCACAAAGT 57.809 36.000 23.18 15.23 45.74 2.66
3172 4024 7.562454 TTTGTACTAGCTTTAGCACAAAGTT 57.438 32.000 9.91 8.46 45.16 2.66
3173 4025 6.539649 TGTACTAGCTTTAGCACAAAGTTG 57.460 37.500 4.33 0.00 45.16 3.16
3174 4026 6.053005 TGTACTAGCTTTAGCACAAAGTTGT 58.947 36.000 4.33 9.86 45.16 3.32
3175 4027 7.211573 TGTACTAGCTTTAGCACAAAGTTGTA 58.788 34.615 4.33 9.17 45.16 2.41
3176 4028 6.541111 ACTAGCTTTAGCACAAAGTTGTAC 57.459 37.500 4.33 0.00 45.16 2.90
3177 4029 6.289064 ACTAGCTTTAGCACAAAGTTGTACT 58.711 36.000 4.33 2.62 45.16 2.73
3178 4030 7.439381 ACTAGCTTTAGCACAAAGTTGTACTA 58.561 34.615 4.33 0.82 45.16 1.82
3179 4031 7.929785 ACTAGCTTTAGCACAAAGTTGTACTAA 59.070 33.333 11.25 11.25 42.33 2.24
3180 4032 7.190920 AGCTTTAGCACAAAGTTGTACTAAG 57.809 36.000 13.78 10.62 43.82 2.18
3181 4033 6.204882 AGCTTTAGCACAAAGTTGTACTAAGG 59.795 38.462 16.35 16.35 43.82 2.69
3182 4034 6.017357 GCTTTAGCACAAAGTTGTACTAAGGT 60.017 38.462 19.41 7.75 43.82 3.50
3183 4035 7.468220 GCTTTAGCACAAAGTTGTACTAAGGTT 60.468 37.037 19.41 1.76 43.82 3.50
3184 4036 8.961294 TTTAGCACAAAGTTGTACTAAGGTTA 57.039 30.769 13.78 1.49 43.82 2.85
3185 4037 8.961294 TTAGCACAAAGTTGTACTAAGGTTAA 57.039 30.769 11.25 0.00 40.35 2.01
3186 4038 7.492352 AGCACAAAGTTGTACTAAGGTTAAG 57.508 36.000 0.00 0.00 39.91 1.85
3187 4039 7.277396 AGCACAAAGTTGTACTAAGGTTAAGA 58.723 34.615 0.00 0.00 39.91 2.10
3188 4040 7.226128 AGCACAAAGTTGTACTAAGGTTAAGAC 59.774 37.037 0.00 0.00 39.91 3.01
3189 4041 7.011669 GCACAAAGTTGTACTAAGGTTAAGACA 59.988 37.037 0.00 0.00 39.91 3.41
3190 4042 8.333186 CACAAAGTTGTACTAAGGTTAAGACAC 58.667 37.037 0.00 0.00 39.91 3.67
3191 4043 8.262933 ACAAAGTTGTACTAAGGTTAAGACACT 58.737 33.333 0.00 0.00 40.16 3.55
3192 4044 9.106070 CAAAGTTGTACTAAGGTTAAGACACTT 57.894 33.333 0.00 0.00 0.00 3.16
3200 4052 8.631480 ACTAAGGTTAAGACACTTATTTTGGG 57.369 34.615 0.00 0.00 0.00 4.12
3201 4053 8.442374 ACTAAGGTTAAGACACTTATTTTGGGA 58.558 33.333 0.00 0.00 0.00 4.37
3202 4054 7.520451 AAGGTTAAGACACTTATTTTGGGAC 57.480 36.000 0.00 0.00 0.00 4.46
3203 4055 5.704053 AGGTTAAGACACTTATTTTGGGACG 59.296 40.000 0.00 0.00 0.00 4.79
3204 4056 5.106436 GGTTAAGACACTTATTTTGGGACGG 60.106 44.000 0.00 0.00 0.00 4.79
3205 4057 4.360951 AAGACACTTATTTTGGGACGGA 57.639 40.909 0.00 0.00 0.00 4.69
3206 4058 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
3207 4059 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3208 4060 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
3209 4061 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3210 4062 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3211 4063 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3212 4064 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3215 4067 0.042131 TTGGGACGGAGGGAGTATGT 59.958 55.000 0.00 0.00 0.00 2.29
3335 4189 1.144057 CCACGGCCACTCTATGTCC 59.856 63.158 2.24 0.00 0.00 4.02
3408 4263 5.243730 CAGGTTGGAATGTTGTGACCTTTAT 59.756 40.000 0.00 0.00 35.43 1.40
3412 4267 8.145122 GGTTGGAATGTTGTGACCTTTATTTTA 58.855 33.333 0.00 0.00 0.00 1.52
3426 4281 9.678247 GACCTTTATTTTAAACGTTGTTTTGTG 57.322 29.630 0.00 0.00 0.00 3.33
3500 4355 4.096382 CGTGATCCAATTGAAAGGGTTAGG 59.904 45.833 7.12 0.00 0.00 2.69
3566 4421 7.792374 CAAGGTATGTATGAGCTTGTATTGT 57.208 36.000 6.45 0.00 43.94 2.71
3868 4723 6.220930 TGAGCTCTTTACAAATGTCTACGTT 58.779 36.000 16.19 0.00 0.00 3.99
3955 4810 9.695526 TGAATTCACCATTTTTATCTTGAAGTG 57.304 29.630 3.38 0.00 0.00 3.16
4029 4884 8.081633 TGGCATTTTAGTCTAATGTCTTGTTTG 58.918 33.333 0.00 0.00 38.20 2.93
4034 4889 8.896320 TTTAGTCTAATGTCTTGTTTGTGCTA 57.104 30.769 0.00 0.00 0.00 3.49
4035 4890 8.534333 TTAGTCTAATGTCTTGTTTGTGCTAG 57.466 34.615 0.00 0.00 0.00 3.42
4037 4892 7.667557 AGTCTAATGTCTTGTTTGTGCTAGTA 58.332 34.615 0.00 0.00 0.00 1.82
4038 4893 7.815068 AGTCTAATGTCTTGTTTGTGCTAGTAG 59.185 37.037 0.00 0.00 0.00 2.57
4068 4937 6.927416 TGCAAAGAATTGAATCATAACTGCT 58.073 32.000 0.00 0.00 38.94 4.24
4090 4959 3.064207 GTTGCACAGTAACGAGATGGAA 58.936 45.455 0.00 0.00 0.00 3.53
4171 5040 5.539048 TGTTTTCTTCTGTACTACCTCTGC 58.461 41.667 0.00 0.00 0.00 4.26
4238 5107 6.698380 ACGTCTTACATTTTGATACAGAGGT 58.302 36.000 0.00 0.00 0.00 3.85
4396 5301 6.430308 TGAAGATGAGTACTCTTCTAACACGT 59.570 38.462 30.88 19.51 45.74 4.49
4400 5305 5.998553 TGAGTACTCTTCTAACACGTTGAG 58.001 41.667 23.01 0.00 0.00 3.02
4412 5317 3.542648 ACACGTTGAGATATCGAGGAGA 58.457 45.455 4.34 0.00 0.00 3.71
4422 5327 7.542890 TGAGATATCGAGGAGAAATAAGCATC 58.457 38.462 0.00 0.00 0.00 3.91
4423 5328 7.177392 TGAGATATCGAGGAGAAATAAGCATCA 59.823 37.037 0.00 0.00 0.00 3.07
4595 5504 2.991250 TGAAGCTAGTGATTTGGCCTC 58.009 47.619 3.32 0.00 0.00 4.70
4682 5591 5.805486 TCAGTTATCGATTACACTTGCAGTC 59.195 40.000 16.19 0.00 0.00 3.51
4712 5621 4.706842 ATGGCGACTGTTATATTTCCCT 57.293 40.909 0.00 0.00 0.00 4.20
4743 5652 3.084786 GTCTTATCAAAGGCAGCAAGGT 58.915 45.455 0.00 0.00 37.28 3.50
4765 5683 2.223386 GGTTGTTGCAGCAACTCGTTAA 60.223 45.455 35.21 19.07 45.69 2.01
4787 5705 4.459390 TTGCCTAACTGTGATACGCTTA 57.541 40.909 0.00 0.00 0.00 3.09
4793 5711 5.686397 CCTAACTGTGATACGCTTAACTAGC 59.314 44.000 0.00 0.00 46.83 3.42
4867 5785 5.240623 TGTTTTTGCTACCATAGACCAGTTG 59.759 40.000 0.00 0.00 0.00 3.16
4885 5804 4.151335 CAGTTGTCAGATGTACTTGCAGTC 59.849 45.833 0.00 0.00 0.00 3.51
4886 5805 4.058124 GTTGTCAGATGTACTTGCAGTCA 58.942 43.478 0.00 0.00 0.00 3.41
4888 5807 4.248058 TGTCAGATGTACTTGCAGTCATG 58.752 43.478 0.00 0.00 0.00 3.07
4895 5814 6.432162 AGATGTACTTGCAGTCATGATTTTGT 59.568 34.615 0.00 0.00 0.00 2.83
4920 5839 5.693104 GCCAATGTATATGGTGCAATTCAAG 59.307 40.000 0.00 0.00 40.23 3.02
4929 5848 3.633525 TGGTGCAATTCAAGCATCCTATC 59.366 43.478 0.00 0.00 44.79 2.08
4940 5859 1.599542 GCATCCTATCGCAACACTTCC 59.400 52.381 0.00 0.00 0.00 3.46
4941 5860 2.743183 GCATCCTATCGCAACACTTCCT 60.743 50.000 0.00 0.00 0.00 3.36
4943 5862 2.176045 TCCTATCGCAACACTTCCTGA 58.824 47.619 0.00 0.00 0.00 3.86
4944 5863 2.565391 TCCTATCGCAACACTTCCTGAA 59.435 45.455 0.00 0.00 0.00 3.02
4946 5865 3.125316 CCTATCGCAACACTTCCTGAAAC 59.875 47.826 0.00 0.00 0.00 2.78
4948 5867 2.210116 TCGCAACACTTCCTGAAACTC 58.790 47.619 0.00 0.00 0.00 3.01
4951 5870 3.206150 GCAACACTTCCTGAAACTCTGA 58.794 45.455 0.00 0.00 0.00 3.27
4952 5871 3.627577 GCAACACTTCCTGAAACTCTGAA 59.372 43.478 0.00 0.00 0.00 3.02
4953 5872 4.496507 GCAACACTTCCTGAAACTCTGAAC 60.497 45.833 0.00 0.00 0.00 3.18
4954 5873 3.458189 ACACTTCCTGAAACTCTGAACG 58.542 45.455 0.00 0.00 0.00 3.95
4955 5874 3.132289 ACACTTCCTGAAACTCTGAACGA 59.868 43.478 0.00 0.00 0.00 3.85
4956 5875 3.491267 CACTTCCTGAAACTCTGAACGAC 59.509 47.826 0.00 0.00 0.00 4.34
4957 5876 3.385111 ACTTCCTGAAACTCTGAACGACT 59.615 43.478 0.00 0.00 0.00 4.18
4958 5877 4.583489 ACTTCCTGAAACTCTGAACGACTA 59.417 41.667 0.00 0.00 0.00 2.59
4960 5879 3.255149 TCCTGAAACTCTGAACGACTACC 59.745 47.826 0.00 0.00 0.00 3.18
4963 5882 3.243636 TGAAACTCTGAACGACTACCCAC 60.244 47.826 0.00 0.00 0.00 4.61
4964 5883 2.289592 ACTCTGAACGACTACCCACT 57.710 50.000 0.00 0.00 0.00 4.00
4965 5884 2.161030 ACTCTGAACGACTACCCACTC 58.839 52.381 0.00 0.00 0.00 3.51
4966 5885 1.130749 CTCTGAACGACTACCCACTCG 59.869 57.143 0.00 0.00 35.96 4.18
4968 5887 0.892358 TGAACGACTACCCACTCGCT 60.892 55.000 0.00 0.00 32.98 4.93
4969 5888 0.456312 GAACGACTACCCACTCGCTG 60.456 60.000 0.00 0.00 32.98 5.18
4970 5889 1.874345 AACGACTACCCACTCGCTGG 61.874 60.000 0.00 0.00 40.26 4.85
4971 5890 2.341101 CGACTACCCACTCGCTGGT 61.341 63.158 0.00 0.00 38.60 4.00
4972 5891 1.874345 CGACTACCCACTCGCTGGTT 61.874 60.000 0.00 0.00 38.60 3.67
4984 5920 2.993471 GCTGGTTTGGGCATCACCG 61.993 63.158 0.00 0.00 40.62 4.94
4992 5928 0.105709 TGGGCATCACCGAGGAGATA 60.106 55.000 1.85 0.00 40.62 1.98
4993 5929 1.270907 GGGCATCACCGAGGAGATAT 58.729 55.000 1.85 0.00 40.62 1.63
4995 5931 1.066573 GGCATCACCGAGGAGATATGG 60.067 57.143 1.85 0.00 0.00 2.74
4996 5932 1.674221 GCATCACCGAGGAGATATGGC 60.674 57.143 1.85 0.00 0.00 4.40
4997 5933 1.620323 CATCACCGAGGAGATATGGCA 59.380 52.381 1.85 0.00 0.00 4.92
4998 5934 1.040646 TCACCGAGGAGATATGGCAC 58.959 55.000 0.00 0.00 0.00 5.01
4999 5935 0.034059 CACCGAGGAGATATGGCACC 59.966 60.000 0.00 0.00 0.00 5.01
5000 5936 0.105453 ACCGAGGAGATATGGCACCT 60.105 55.000 0.00 0.00 35.29 4.00
5003 5939 1.543802 CGAGGAGATATGGCACCTCTC 59.456 57.143 16.33 16.23 44.47 3.20
5013 5956 1.141657 TGGCACCTCTCCTATGATTGC 59.858 52.381 0.00 0.00 0.00 3.56
5042 5985 4.599047 TGGGCTTTGTTACTTTTGATGG 57.401 40.909 0.00 0.00 0.00 3.51
5101 6046 0.387239 GGTTTGCGCTGATGTGGTTC 60.387 55.000 9.73 0.00 0.00 3.62
5142 6087 1.076533 GGTGTGCGTCATGTCTACGG 61.077 60.000 7.44 0.00 40.64 4.02
5168 6113 0.948623 TTCCGTTCATGACAGCGGTG 60.949 55.000 23.35 14.13 44.07 4.94
5169 6114 2.390599 CCGTTCATGACAGCGGTGG 61.391 63.158 20.20 0.45 39.41 4.61
5170 6115 1.667830 CGTTCATGACAGCGGTGGT 60.668 57.895 20.20 4.40 0.00 4.16
5171 6116 1.868997 GTTCATGACAGCGGTGGTG 59.131 57.895 20.20 14.12 37.06 4.17
5172 6117 0.602638 GTTCATGACAGCGGTGGTGA 60.603 55.000 20.20 16.13 34.87 4.02
5173 6118 0.320683 TTCATGACAGCGGTGGTGAG 60.321 55.000 20.20 6.32 34.87 3.51
5174 6119 2.046892 ATGACAGCGGTGGTGAGC 60.047 61.111 20.20 3.36 34.87 4.26
5175 6120 2.882677 ATGACAGCGGTGGTGAGCA 61.883 57.895 20.20 8.94 34.87 4.26
5176 6121 3.044305 GACAGCGGTGGTGAGCAC 61.044 66.667 20.20 6.17 34.87 4.40
5177 6122 3.521529 GACAGCGGTGGTGAGCACT 62.522 63.158 20.20 0.00 34.87 4.40
5178 6123 2.740055 CAGCGGTGGTGAGCACTC 60.740 66.667 14.88 7.06 35.48 3.51
5179 6124 2.919856 AGCGGTGGTGAGCACTCT 60.920 61.111 14.88 9.19 35.48 3.24
5180 6125 2.740055 GCGGTGGTGAGCACTCTG 60.740 66.667 14.88 6.32 0.00 3.35
5181 6126 2.737180 CGGTGGTGAGCACTCTGT 59.263 61.111 14.88 0.00 0.00 3.41
5182 6127 1.069765 CGGTGGTGAGCACTCTGTT 59.930 57.895 14.88 0.00 0.00 3.16
5183 6128 0.532862 CGGTGGTGAGCACTCTGTTT 60.533 55.000 14.88 0.00 0.00 2.83
5184 6129 0.947244 GGTGGTGAGCACTCTGTTTG 59.053 55.000 14.88 0.00 0.00 2.93
5185 6130 0.947244 GTGGTGAGCACTCTGTTTGG 59.053 55.000 7.64 0.00 0.00 3.28
5186 6131 0.546122 TGGTGAGCACTCTGTTTGGT 59.454 50.000 0.16 0.00 0.00 3.67
5187 6132 1.064758 TGGTGAGCACTCTGTTTGGTT 60.065 47.619 0.16 0.00 0.00 3.67
5188 6133 1.334869 GGTGAGCACTCTGTTTGGTTG 59.665 52.381 0.16 0.00 0.00 3.77
5189 6134 1.024271 TGAGCACTCTGTTTGGTTGC 58.976 50.000 0.00 0.00 0.00 4.17
5190 6135 1.024271 GAGCACTCTGTTTGGTTGCA 58.976 50.000 0.00 0.00 0.00 4.08
5191 6136 1.610522 GAGCACTCTGTTTGGTTGCAT 59.389 47.619 0.00 0.00 0.00 3.96
5192 6137 2.034124 AGCACTCTGTTTGGTTGCATT 58.966 42.857 0.00 0.00 0.00 3.56
5193 6138 2.431782 AGCACTCTGTTTGGTTGCATTT 59.568 40.909 0.00 0.00 0.00 2.32
5194 6139 3.118665 AGCACTCTGTTTGGTTGCATTTT 60.119 39.130 0.00 0.00 0.00 1.82
5195 6140 3.245990 GCACTCTGTTTGGTTGCATTTTC 59.754 43.478 0.00 0.00 0.00 2.29
5196 6141 4.431809 CACTCTGTTTGGTTGCATTTTCA 58.568 39.130 0.00 0.00 0.00 2.69
5197 6142 5.051816 CACTCTGTTTGGTTGCATTTTCAT 58.948 37.500 0.00 0.00 0.00 2.57
5198 6143 5.176223 CACTCTGTTTGGTTGCATTTTCATC 59.824 40.000 0.00 0.00 0.00 2.92
5199 6144 5.069516 ACTCTGTTTGGTTGCATTTTCATCT 59.930 36.000 0.00 0.00 0.00 2.90
5200 6145 5.531634 TCTGTTTGGTTGCATTTTCATCTC 58.468 37.500 0.00 0.00 0.00 2.75
5201 6146 5.068855 TCTGTTTGGTTGCATTTTCATCTCA 59.931 36.000 0.00 0.00 0.00 3.27
5202 6147 5.291178 TGTTTGGTTGCATTTTCATCTCAG 58.709 37.500 0.00 0.00 0.00 3.35
5203 6148 3.581024 TGGTTGCATTTTCATCTCAGC 57.419 42.857 0.00 0.00 0.00 4.26
5204 6149 2.892215 TGGTTGCATTTTCATCTCAGCA 59.108 40.909 0.00 0.00 0.00 4.41
5205 6150 3.512329 TGGTTGCATTTTCATCTCAGCAT 59.488 39.130 0.00 0.00 0.00 3.79
5206 6151 4.705991 TGGTTGCATTTTCATCTCAGCATA 59.294 37.500 0.00 0.00 0.00 3.14
5207 6152 5.163591 TGGTTGCATTTTCATCTCAGCATAG 60.164 40.000 0.00 0.00 0.00 2.23
5208 6153 5.163581 GGTTGCATTTTCATCTCAGCATAGT 60.164 40.000 0.00 0.00 0.00 2.12
5209 6154 6.327934 GTTGCATTTTCATCTCAGCATAGTT 58.672 36.000 0.00 0.00 0.00 2.24
5210 6155 5.886992 TGCATTTTCATCTCAGCATAGTTG 58.113 37.500 0.00 0.00 0.00 3.16
5211 6156 5.416639 TGCATTTTCATCTCAGCATAGTTGT 59.583 36.000 0.00 0.00 0.00 3.32
5212 6157 6.071784 TGCATTTTCATCTCAGCATAGTTGTT 60.072 34.615 0.00 0.00 0.00 2.83
5213 6158 6.471519 GCATTTTCATCTCAGCATAGTTGTTC 59.528 38.462 0.00 0.00 0.00 3.18
5214 6159 6.500684 TTTTCATCTCAGCATAGTTGTTCC 57.499 37.500 0.00 0.00 0.00 3.62
5215 6160 4.142609 TCATCTCAGCATAGTTGTTCCC 57.857 45.455 0.00 0.00 0.00 3.97
5216 6161 3.776969 TCATCTCAGCATAGTTGTTCCCT 59.223 43.478 0.00 0.00 0.00 4.20
5217 6162 3.895232 TCTCAGCATAGTTGTTCCCTC 57.105 47.619 0.00 0.00 0.00 4.30
5218 6163 3.445008 TCTCAGCATAGTTGTTCCCTCT 58.555 45.455 0.00 0.00 0.00 3.69
5219 6164 3.840666 TCTCAGCATAGTTGTTCCCTCTT 59.159 43.478 0.00 0.00 0.00 2.85
5220 6165 3.937706 CTCAGCATAGTTGTTCCCTCTTG 59.062 47.826 0.00 0.00 0.00 3.02
5221 6166 3.012518 CAGCATAGTTGTTCCCTCTTGG 58.987 50.000 0.00 0.00 0.00 3.61
5222 6167 2.644798 AGCATAGTTGTTCCCTCTTGGT 59.355 45.455 0.00 0.00 34.77 3.67
5223 6168 2.749621 GCATAGTTGTTCCCTCTTGGTG 59.250 50.000 0.00 0.00 34.77 4.17
5224 6169 2.561478 TAGTTGTTCCCTCTTGGTGC 57.439 50.000 0.00 0.00 34.77 5.01
5225 6170 0.550914 AGTTGTTCCCTCTTGGTGCA 59.449 50.000 0.00 0.00 34.77 4.57
5226 6171 1.145738 AGTTGTTCCCTCTTGGTGCAT 59.854 47.619 0.00 0.00 34.77 3.96
5227 6172 1.270550 GTTGTTCCCTCTTGGTGCATG 59.729 52.381 0.00 0.00 34.77 4.06
5228 6173 0.895100 TGTTCCCTCTTGGTGCATGC 60.895 55.000 11.82 11.82 34.77 4.06
5229 6174 0.610232 GTTCCCTCTTGGTGCATGCT 60.610 55.000 20.33 0.00 34.77 3.79
5230 6175 0.322816 TTCCCTCTTGGTGCATGCTC 60.323 55.000 20.33 15.68 34.77 4.26
5231 6176 1.001764 CCCTCTTGGTGCATGCTCA 60.002 57.895 20.33 14.28 0.00 4.26
5232 6177 0.395311 CCCTCTTGGTGCATGCTCAT 60.395 55.000 20.33 0.00 0.00 2.90
5233 6178 1.022735 CCTCTTGGTGCATGCTCATC 58.977 55.000 20.33 0.00 0.00 2.92
5234 6179 1.408405 CCTCTTGGTGCATGCTCATCT 60.408 52.381 20.33 0.00 0.00 2.90
5235 6180 1.941294 CTCTTGGTGCATGCTCATCTC 59.059 52.381 20.33 3.05 0.00 2.75
5236 6181 1.279846 TCTTGGTGCATGCTCATCTCA 59.720 47.619 20.33 5.81 0.00 3.27
5237 6182 1.671328 CTTGGTGCATGCTCATCTCAG 59.329 52.381 20.33 7.75 0.00 3.35
5238 6183 0.746923 TGGTGCATGCTCATCTCAGC 60.747 55.000 20.33 6.71 40.13 4.26
5246 6191 3.840124 TGCTCATCTCAGCATTCATCT 57.160 42.857 0.00 0.00 44.73 2.90
5247 6192 4.152284 TGCTCATCTCAGCATTCATCTT 57.848 40.909 0.00 0.00 44.73 2.40
5248 6193 4.127907 TGCTCATCTCAGCATTCATCTTC 58.872 43.478 0.00 0.00 44.73 2.87
5249 6194 4.127907 GCTCATCTCAGCATTCATCTTCA 58.872 43.478 0.00 0.00 39.43 3.02
5250 6195 4.757657 GCTCATCTCAGCATTCATCTTCAT 59.242 41.667 0.00 0.00 39.43 2.57
5251 6196 5.334491 GCTCATCTCAGCATTCATCTTCATG 60.334 44.000 0.00 0.00 39.43 3.07
5252 6197 4.515567 TCATCTCAGCATTCATCTTCATGC 59.484 41.667 0.00 0.00 45.30 4.06
5258 6203 4.162096 GCATTCATCTTCATGCATCCTC 57.838 45.455 0.00 0.00 44.49 3.71
5259 6204 3.057456 GCATTCATCTTCATGCATCCTCC 60.057 47.826 0.00 0.00 44.49 4.30
5260 6205 4.399219 CATTCATCTTCATGCATCCTCCT 58.601 43.478 0.00 0.00 0.00 3.69
5261 6206 5.557866 CATTCATCTTCATGCATCCTCCTA 58.442 41.667 0.00 0.00 0.00 2.94
5262 6207 4.886496 TCATCTTCATGCATCCTCCTAG 57.114 45.455 0.00 0.00 0.00 3.02
5263 6208 4.229639 TCATCTTCATGCATCCTCCTAGT 58.770 43.478 0.00 0.00 0.00 2.57
5264 6209 4.040095 TCATCTTCATGCATCCTCCTAGTG 59.960 45.833 0.00 0.00 0.00 2.74
5265 6210 3.378512 TCTTCATGCATCCTCCTAGTGT 58.621 45.455 0.00 0.00 0.00 3.55
5266 6211 4.546674 TCTTCATGCATCCTCCTAGTGTA 58.453 43.478 0.00 0.00 0.00 2.90
5267 6212 5.150715 TCTTCATGCATCCTCCTAGTGTAT 58.849 41.667 0.00 0.00 0.00 2.29
5268 6213 5.604231 TCTTCATGCATCCTCCTAGTGTATT 59.396 40.000 0.00 0.00 0.00 1.89
5269 6214 5.894298 TCATGCATCCTCCTAGTGTATTT 57.106 39.130 0.00 0.00 0.00 1.40
5270 6215 6.994421 TCATGCATCCTCCTAGTGTATTTA 57.006 37.500 0.00 0.00 0.00 1.40
5271 6216 7.559335 TCATGCATCCTCCTAGTGTATTTAT 57.441 36.000 0.00 0.00 0.00 1.40
5272 6217 7.389232 TCATGCATCCTCCTAGTGTATTTATG 58.611 38.462 0.00 0.00 0.00 1.90
5273 6218 6.747414 TGCATCCTCCTAGTGTATTTATGT 57.253 37.500 0.00 0.00 0.00 2.29
5274 6219 7.136822 TGCATCCTCCTAGTGTATTTATGTT 57.863 36.000 0.00 0.00 0.00 2.71
5275 6220 8.257602 TGCATCCTCCTAGTGTATTTATGTTA 57.742 34.615 0.00 0.00 0.00 2.41
5276 6221 8.710239 TGCATCCTCCTAGTGTATTTATGTTAA 58.290 33.333 0.00 0.00 0.00 2.01
5277 6222 9.209175 GCATCCTCCTAGTGTATTTATGTTAAG 57.791 37.037 0.00 0.00 0.00 1.85
5278 6223 9.209175 CATCCTCCTAGTGTATTTATGTTAAGC 57.791 37.037 0.00 0.00 0.00 3.09
5279 6224 8.548880 TCCTCCTAGTGTATTTATGTTAAGCT 57.451 34.615 0.00 0.00 0.00 3.74
5280 6225 9.650714 TCCTCCTAGTGTATTTATGTTAAGCTA 57.349 33.333 0.00 0.00 0.00 3.32
5281 6226 9.915629 CCTCCTAGTGTATTTATGTTAAGCTAG 57.084 37.037 0.00 0.00 0.00 3.42
5284 6229 8.979574 CCTAGTGTATTTATGTTAAGCTAGTGC 58.020 37.037 0.00 0.00 40.05 4.40
5285 6230 7.464830 AGTGTATTTATGTTAAGCTAGTGCG 57.535 36.000 0.00 0.00 45.42 5.34
5286 6231 6.479001 AGTGTATTTATGTTAAGCTAGTGCGG 59.521 38.462 0.00 0.00 45.42 5.69
5287 6232 6.477688 GTGTATTTATGTTAAGCTAGTGCGGA 59.522 38.462 0.00 0.00 45.42 5.54
5288 6233 5.986004 ATTTATGTTAAGCTAGTGCGGAC 57.014 39.130 0.00 0.00 45.42 4.79
5289 6234 4.730949 TTATGTTAAGCTAGTGCGGACT 57.269 40.909 15.78 15.78 45.42 3.85
5290 6235 2.649331 TGTTAAGCTAGTGCGGACTC 57.351 50.000 14.74 0.00 45.42 3.36
5291 6236 1.890489 TGTTAAGCTAGTGCGGACTCA 59.110 47.619 14.74 0.00 45.42 3.41
5292 6237 2.496070 TGTTAAGCTAGTGCGGACTCAT 59.504 45.455 14.74 0.74 45.42 2.90
5293 6238 2.860735 GTTAAGCTAGTGCGGACTCATG 59.139 50.000 14.74 6.57 45.42 3.07
5294 6239 0.460987 AAGCTAGTGCGGACTCATGC 60.461 55.000 14.74 16.38 45.42 4.06
5295 6240 1.153568 GCTAGTGCGGACTCATGCA 60.154 57.895 14.74 0.00 39.13 3.96
5296 6241 0.531532 GCTAGTGCGGACTCATGCAT 60.532 55.000 14.74 0.00 43.96 3.96
5297 6242 1.495878 CTAGTGCGGACTCATGCATC 58.504 55.000 14.74 0.00 43.96 3.91
5298 6243 0.104855 TAGTGCGGACTCATGCATCC 59.895 55.000 14.74 0.00 43.96 3.51
5299 6244 1.153289 GTGCGGACTCATGCATCCT 60.153 57.895 0.00 0.00 43.96 3.24
5300 6245 0.745845 GTGCGGACTCATGCATCCTT 60.746 55.000 0.00 0.00 43.96 3.36
5301 6246 0.462581 TGCGGACTCATGCATCCTTC 60.463 55.000 0.00 0.00 35.90 3.46
5302 6247 0.462581 GCGGACTCATGCATCCTTCA 60.463 55.000 0.00 0.00 32.33 3.02
5303 6248 1.813092 GCGGACTCATGCATCCTTCAT 60.813 52.381 0.00 0.00 32.33 2.57
5304 6249 2.548707 GCGGACTCATGCATCCTTCATA 60.549 50.000 0.00 0.00 32.33 2.15
5305 6250 3.062763 CGGACTCATGCATCCTTCATAC 58.937 50.000 0.00 0.00 32.33 2.39
5306 6251 3.493176 CGGACTCATGCATCCTTCATACA 60.493 47.826 0.00 0.00 32.33 2.29
5307 6252 3.812053 GGACTCATGCATCCTTCATACAC 59.188 47.826 0.00 0.00 31.75 2.90
5308 6253 3.812053 GACTCATGCATCCTTCATACACC 59.188 47.826 0.00 0.00 0.00 4.16
5309 6254 3.144506 CTCATGCATCCTTCATACACCC 58.855 50.000 0.00 0.00 0.00 4.61
5310 6255 2.779430 TCATGCATCCTTCATACACCCT 59.221 45.455 0.00 0.00 0.00 4.34
5311 6256 3.973305 TCATGCATCCTTCATACACCCTA 59.027 43.478 0.00 0.00 0.00 3.53
5312 6257 3.838244 TGCATCCTTCATACACCCTAC 57.162 47.619 0.00 0.00 0.00 3.18
5313 6258 2.438021 TGCATCCTTCATACACCCTACC 59.562 50.000 0.00 0.00 0.00 3.18
5314 6259 2.438021 GCATCCTTCATACACCCTACCA 59.562 50.000 0.00 0.00 0.00 3.25
5315 6260 3.118038 GCATCCTTCATACACCCTACCAA 60.118 47.826 0.00 0.00 0.00 3.67
5316 6261 4.627741 GCATCCTTCATACACCCTACCAAA 60.628 45.833 0.00 0.00 0.00 3.28
5317 6262 4.563140 TCCTTCATACACCCTACCAAAC 57.437 45.455 0.00 0.00 0.00 2.93
5318 6263 3.911260 TCCTTCATACACCCTACCAAACA 59.089 43.478 0.00 0.00 0.00 2.83
5319 6264 4.007659 CCTTCATACACCCTACCAAACAC 58.992 47.826 0.00 0.00 0.00 3.32
5320 6265 4.505918 CCTTCATACACCCTACCAAACACA 60.506 45.833 0.00 0.00 0.00 3.72
5321 6266 4.010667 TCATACACCCTACCAAACACAC 57.989 45.455 0.00 0.00 0.00 3.82
5322 6267 2.934886 TACACCCTACCAAACACACC 57.065 50.000 0.00 0.00 0.00 4.16
5323 6268 0.184211 ACACCCTACCAAACACACCC 59.816 55.000 0.00 0.00 0.00 4.61
5324 6269 0.887387 CACCCTACCAAACACACCCG 60.887 60.000 0.00 0.00 0.00 5.28
5325 6270 1.055551 ACCCTACCAAACACACCCGA 61.056 55.000 0.00 0.00 0.00 5.14
5326 6271 0.604511 CCCTACCAAACACACCCGAC 60.605 60.000 0.00 0.00 0.00 4.79
5327 6272 0.395312 CCTACCAAACACACCCGACT 59.605 55.000 0.00 0.00 0.00 4.18
5328 6273 1.202722 CCTACCAAACACACCCGACTT 60.203 52.381 0.00 0.00 0.00 3.01
5329 6274 1.871039 CTACCAAACACACCCGACTTG 59.129 52.381 0.00 0.00 0.00 3.16
5330 6275 0.750182 ACCAAACACACCCGACTTGG 60.750 55.000 0.00 0.00 41.91 3.61
5331 6276 0.464735 CCAAACACACCCGACTTGGA 60.465 55.000 0.00 0.00 42.00 3.53
5332 6277 1.384525 CAAACACACCCGACTTGGAA 58.615 50.000 0.00 0.00 42.00 3.53
5333 6278 1.953686 CAAACACACCCGACTTGGAAT 59.046 47.619 0.00 0.00 42.00 3.01
5334 6279 1.604604 AACACACCCGACTTGGAATG 58.395 50.000 0.00 0.00 42.00 2.67
5335 6280 0.472471 ACACACCCGACTTGGAATGT 59.528 50.000 0.00 0.00 42.00 2.71
5336 6281 1.695242 ACACACCCGACTTGGAATGTA 59.305 47.619 0.00 0.00 42.00 2.29
5337 6282 2.289444 ACACACCCGACTTGGAATGTAG 60.289 50.000 0.00 0.00 42.00 2.74
5338 6283 1.278127 ACACCCGACTTGGAATGTAGG 59.722 52.381 0.00 0.00 42.00 3.18
5339 6284 0.252197 ACCCGACTTGGAATGTAGGC 59.748 55.000 0.00 0.00 42.00 3.93
5340 6285 0.251916 CCCGACTTGGAATGTAGGCA 59.748 55.000 0.00 0.00 42.00 4.75
5341 6286 1.656652 CCGACTTGGAATGTAGGCAG 58.343 55.000 0.00 0.00 42.00 4.85
5342 6287 1.009829 CGACTTGGAATGTAGGCAGC 58.990 55.000 0.00 0.00 0.00 5.25
5343 6288 1.009829 GACTTGGAATGTAGGCAGCG 58.990 55.000 0.00 0.00 0.00 5.18
5344 6289 1.026718 ACTTGGAATGTAGGCAGCGC 61.027 55.000 0.00 0.00 0.00 5.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 19 1.544724 TGCAGCCTTATTTGGTGTCC 58.455 50.000 0.00 0.00 0.00 4.02
26 29 3.640967 AGGTGAAAACAAATGCAGCCTTA 59.359 39.130 0.00 0.00 0.00 2.69
30 33 2.825205 ACAGGTGAAAACAAATGCAGC 58.175 42.857 0.00 0.00 0.00 5.25
69 75 5.949735 TCCAACTTCTCACAACAAAACTTC 58.050 37.500 0.00 0.00 0.00 3.01
88 94 5.337169 CCAAAAGACAACTTCCAAGTTCCAA 60.337 40.000 1.52 0.00 45.65 3.53
89 95 4.159506 CCAAAAGACAACTTCCAAGTTCCA 59.840 41.667 1.52 0.00 45.65 3.53
90 96 4.159693 ACCAAAAGACAACTTCCAAGTTCC 59.840 41.667 1.52 0.00 45.65 3.62
91 97 5.324784 ACCAAAAGACAACTTCCAAGTTC 57.675 39.130 1.52 0.00 45.65 3.01
93 99 4.081697 CCAACCAAAAGACAACTTCCAAGT 60.082 41.667 0.00 0.00 42.04 3.16
94 100 4.081697 ACCAACCAAAAGACAACTTCCAAG 60.082 41.667 0.00 0.00 35.05 3.61
186 198 9.390795 CTCTTTCATCATAAACAAGTGAAACAG 57.609 33.333 0.00 0.00 41.43 3.16
297 310 3.096489 TGTGCATTCAACCAAAAGAGC 57.904 42.857 0.00 0.00 0.00 4.09
368 384 7.714813 TCTCAATTTTCATGTATCGATTGGCTA 59.285 33.333 1.71 0.00 0.00 3.93
392 408 6.581171 TGATTGATGATACGACTAGCATCT 57.419 37.500 11.21 0.00 43.48 2.90
479 495 6.928348 TTGGTGGTCTCTAATAAGTTCTGA 57.072 37.500 0.00 0.00 0.00 3.27
540 572 7.087639 CGTATGAAATCTGATCTTCCTCCTAC 58.912 42.308 0.00 0.00 0.00 3.18
669 734 3.966215 ACGACAATTGCGTCAGGG 58.034 55.556 18.05 0.00 37.42 4.45
745 810 0.251165 TTAGGGCCAGTTTGACTGCC 60.251 55.000 6.18 7.55 44.63 4.85
820 885 4.043200 GTTGGTGCCTCGGCTTGC 62.043 66.667 9.65 0.00 42.51 4.01
821 886 3.365265 GGTTGGTGCCTCGGCTTG 61.365 66.667 9.65 0.00 42.51 4.01
822 887 3.553095 GAGGTTGGTGCCTCGGCTT 62.553 63.158 9.65 0.00 44.64 4.35
823 888 4.021925 GAGGTTGGTGCCTCGGCT 62.022 66.667 9.65 0.00 44.64 5.52
842 907 1.415126 GGGGAGAAGGAGATGGATGGA 60.415 57.143 0.00 0.00 0.00 3.41
843 908 1.063183 GGGGAGAAGGAGATGGATGG 58.937 60.000 0.00 0.00 0.00 3.51
844 909 1.698532 CAGGGGAGAAGGAGATGGATG 59.301 57.143 0.00 0.00 0.00 3.51
845 910 2.044469 GCAGGGGAGAAGGAGATGGAT 61.044 57.143 0.00 0.00 0.00 3.41
846 911 0.692419 GCAGGGGAGAAGGAGATGGA 60.692 60.000 0.00 0.00 0.00 3.41
880 945 3.713826 TTTTCTGGTCGCCTCCTTATT 57.286 42.857 0.00 0.00 0.00 1.40
885 950 2.010497 GAGATTTTTCTGGTCGCCTCC 58.990 52.381 0.00 0.00 0.00 4.30
887 952 1.630878 AGGAGATTTTTCTGGTCGCCT 59.369 47.619 0.00 0.00 37.35 5.52
890 955 3.618690 AGGAGGAGATTTTTCTGGTCG 57.381 47.619 0.00 0.00 0.00 4.79
891 956 4.018870 AGGAAGGAGGAGATTTTTCTGGTC 60.019 45.833 0.00 0.00 0.00 4.02
893 958 4.582973 AGGAAGGAGGAGATTTTTCTGG 57.417 45.455 0.00 0.00 0.00 3.86
924 990 4.060667 GGGTGGGTGGGATGTGGG 62.061 72.222 0.00 0.00 0.00 4.61
976 1042 1.378646 GTTGGCTGGCTAGGGTTCC 60.379 63.158 0.00 0.00 0.00 3.62
977 1043 1.378646 GGTTGGCTGGCTAGGGTTC 60.379 63.158 0.00 0.00 0.00 3.62
978 1044 2.763902 GGTTGGCTGGCTAGGGTT 59.236 61.111 0.00 0.00 0.00 4.11
979 1045 3.339093 GGGTTGGCTGGCTAGGGT 61.339 66.667 0.00 0.00 0.00 4.34
980 1046 4.489771 CGGGTTGGCTGGCTAGGG 62.490 72.222 0.00 0.00 0.00 3.53
1878 2263 4.953667 TGCACAATGATTAGCAAAACCAA 58.046 34.783 2.52 0.00 33.48 3.67
1880 2265 4.330620 CCATGCACAATGATTAGCAAAACC 59.669 41.667 8.25 0.00 40.76 3.27
1889 2275 5.221441 CCTCATCAATCCATGCACAATGATT 60.221 40.000 0.00 0.00 38.72 2.57
1930 2316 9.450807 AAACATAGCACGCAGAATAATAAAATC 57.549 29.630 0.00 0.00 0.00 2.17
1940 2326 4.455533 AGAAATCAAACATAGCACGCAGAA 59.544 37.500 0.00 0.00 0.00 3.02
2083 2594 2.224744 TGTTGGAACAGCTAGGCATGAA 60.225 45.455 0.00 0.00 42.39 2.57
2150 2664 3.091545 CAAATTAAAGCTGCCCTCAGGA 58.908 45.455 0.00 0.00 40.65 3.86
2222 2740 6.963322 ACAATAAGCTAGGGAAGATGAAGTT 58.037 36.000 0.00 0.00 0.00 2.66
2248 2766 5.003160 TGAAGTGTAACCCAACTCATCATG 58.997 41.667 0.00 0.00 37.80 3.07
2249 2767 5.241403 TGAAGTGTAACCCAACTCATCAT 57.759 39.130 0.00 0.00 37.80 2.45
2312 2830 2.099141 TCACCTCGCATTCAAAGGAG 57.901 50.000 0.00 0.00 34.16 3.69
2317 2835 5.007626 GCTTATGTTATCACCTCGCATTCAA 59.992 40.000 0.00 0.00 0.00 2.69
2318 2836 4.511454 GCTTATGTTATCACCTCGCATTCA 59.489 41.667 0.00 0.00 0.00 2.57
2319 2837 4.752101 AGCTTATGTTATCACCTCGCATTC 59.248 41.667 0.00 0.00 0.00 2.67
2320 2838 4.708177 AGCTTATGTTATCACCTCGCATT 58.292 39.130 0.00 0.00 0.00 3.56
2321 2839 4.342862 AGCTTATGTTATCACCTCGCAT 57.657 40.909 0.00 0.00 0.00 4.73
2322 2840 3.819564 AGCTTATGTTATCACCTCGCA 57.180 42.857 0.00 0.00 0.00 5.10
2323 2841 3.303395 GCAAGCTTATGTTATCACCTCGC 60.303 47.826 0.00 0.00 0.00 5.03
2324 2842 3.871006 TGCAAGCTTATGTTATCACCTCG 59.129 43.478 0.00 0.00 0.00 4.63
2325 2843 6.382869 AATGCAAGCTTATGTTATCACCTC 57.617 37.500 0.00 0.00 0.00 3.85
2326 2844 6.828273 TGTAATGCAAGCTTATGTTATCACCT 59.172 34.615 0.00 0.00 0.00 4.00
2327 2845 7.026631 TGTAATGCAAGCTTATGTTATCACC 57.973 36.000 0.00 0.00 0.00 4.02
2328 2846 8.498192 CATGTAATGCAAGCTTATGTTATCAC 57.502 34.615 0.00 0.00 37.62 3.06
2396 2914 1.401905 GCAAGAACATCCATTCCGTCC 59.598 52.381 0.00 0.00 0.00 4.79
2557 3165 4.488126 TTTCAAGAGAAAATGGAGTGCG 57.512 40.909 0.00 0.00 40.61 5.34
2637 3245 4.346734 CAAATTCTTGGACACAGATCCG 57.653 45.455 0.00 0.00 42.24 4.18
2684 3292 1.751924 CCACCTACTGTAGAGAGCCAC 59.248 57.143 16.22 0.00 0.00 5.01
2690 3298 4.744795 ATTCAAGCCACCTACTGTAGAG 57.255 45.455 16.22 8.74 0.00 2.43
2769 3377 9.406828 GTATTGATCATCAAAGTATACAGCGTA 57.593 33.333 3.63 0.00 40.12 4.42
2770 3378 7.926018 TGTATTGATCATCAAAGTATACAGCGT 59.074 33.333 3.63 0.00 40.12 5.07
2771 3379 8.298030 TGTATTGATCATCAAAGTATACAGCG 57.702 34.615 3.63 0.00 40.12 5.18
2892 3501 4.944962 CGGTTAGCAGAAATTGACATGA 57.055 40.909 0.00 0.00 0.00 3.07
2920 3529 1.114722 ACTTCACGGGTGAACGGGTA 61.115 55.000 10.04 0.00 43.90 3.69
2931 3540 4.319766 GCATAGCATTTCCATACTTCACGG 60.320 45.833 0.00 0.00 0.00 4.94
2933 3542 5.297776 AGTGCATAGCATTTCCATACTTCAC 59.702 40.000 0.00 0.00 41.91 3.18
2958 3571 0.674581 TCAAAGCTGTCATCAGGCCG 60.675 55.000 0.00 0.00 41.57 6.13
3010 3862 0.599558 GAATCAGCAGCAGCCAACAA 59.400 50.000 0.00 0.00 43.56 2.83
3064 3916 7.148407 GGAAATAATCACGGCCATGTATAAGAG 60.148 40.741 2.24 0.00 0.00 2.85
3072 3924 4.761739 ACTATGGAAATAATCACGGCCATG 59.238 41.667 2.24 0.00 36.82 3.66
3118 3970 4.263506 ACACTTATTTTGGGACAGAGGGAG 60.264 45.833 0.00 0.00 42.39 4.30
3119 3971 3.655777 ACACTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
3120 3972 4.010349 GACACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
3121 3973 4.911390 AGACACTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
3122 3974 5.551233 TGAGACACTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
3123 3975 5.560722 TGAGACACTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
3124 3976 5.765182 AGTTGAGACACTTATTTTGGGACAG 59.235 40.000 0.00 0.00 42.39 3.51
3125 3977 5.690865 AGTTGAGACACTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
3126 3978 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
3127 3979 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
3128 3980 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
3129 3981 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
3132 3984 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
3133 3985 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
3134 3986 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
3135 3987 7.286215 AGCTAGTACAAAGTTGAGACACTTA 57.714 36.000 0.00 0.00 35.87 2.24
3136 3988 6.163135 AGCTAGTACAAAGTTGAGACACTT 57.837 37.500 0.00 0.00 38.74 3.16
3137 3989 5.793030 AGCTAGTACAAAGTTGAGACACT 57.207 39.130 0.00 0.00 0.00 3.55
3138 3990 6.846325 AAAGCTAGTACAAAGTTGAGACAC 57.154 37.500 0.00 0.00 0.00 3.67
3139 3991 6.645415 GCTAAAGCTAGTACAAAGTTGAGACA 59.355 38.462 0.00 0.00 38.21 3.41
3140 3992 6.645415 TGCTAAAGCTAGTACAAAGTTGAGAC 59.355 38.462 3.26 0.00 42.66 3.36
3141 3993 6.645415 GTGCTAAAGCTAGTACAAAGTTGAGA 59.355 38.462 3.26 0.00 39.73 3.27
3142 3994 6.423905 TGTGCTAAAGCTAGTACAAAGTTGAG 59.576 38.462 5.09 0.00 44.69 3.02
3143 3995 6.285224 TGTGCTAAAGCTAGTACAAAGTTGA 58.715 36.000 5.09 0.00 44.69 3.18
3144 3996 6.539649 TGTGCTAAAGCTAGTACAAAGTTG 57.460 37.500 5.09 0.00 44.69 3.16
3150 4002 6.053005 ACAACTTTGTGCTAAAGCTAGTACA 58.947 36.000 3.56 3.56 45.60 2.90
3151 4003 6.541111 ACAACTTTGTGCTAAAGCTAGTAC 57.459 37.500 12.10 0.00 40.49 2.73
3152 4004 7.647907 GTACAACTTTGTGCTAAAGCTAGTA 57.352 36.000 4.82 9.95 42.31 1.82
3153 4005 6.541111 GTACAACTTTGTGCTAAAGCTAGT 57.459 37.500 4.82 10.66 42.31 2.57
3163 4015 7.011669 TGTCTTAACCTTAGTACAACTTTGTGC 59.988 37.037 4.82 3.50 42.31 4.57
3164 4016 8.333186 GTGTCTTAACCTTAGTACAACTTTGTG 58.667 37.037 4.82 0.00 42.31 3.33
3165 4017 8.262933 AGTGTCTTAACCTTAGTACAACTTTGT 58.737 33.333 0.00 0.00 44.86 2.83
3166 4018 8.658499 AGTGTCTTAACCTTAGTACAACTTTG 57.342 34.615 0.00 0.00 0.00 2.77
3174 4026 9.729281 CCCAAAATAAGTGTCTTAACCTTAGTA 57.271 33.333 0.00 0.00 0.00 1.82
3175 4027 8.442374 TCCCAAAATAAGTGTCTTAACCTTAGT 58.558 33.333 0.00 0.00 0.00 2.24
3176 4028 8.727910 GTCCCAAAATAAGTGTCTTAACCTTAG 58.272 37.037 0.00 0.00 0.00 2.18
3177 4029 7.388500 CGTCCCAAAATAAGTGTCTTAACCTTA 59.612 37.037 0.00 0.00 0.00 2.69
3178 4030 6.206048 CGTCCCAAAATAAGTGTCTTAACCTT 59.794 38.462 0.00 0.00 0.00 3.50
3179 4031 5.704053 CGTCCCAAAATAAGTGTCTTAACCT 59.296 40.000 0.00 0.00 0.00 3.50
3180 4032 5.106436 CCGTCCCAAAATAAGTGTCTTAACC 60.106 44.000 0.00 0.00 0.00 2.85
3181 4033 5.702209 TCCGTCCCAAAATAAGTGTCTTAAC 59.298 40.000 0.00 0.00 0.00 2.01
3182 4034 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
3183 4035 5.484715 CTCCGTCCCAAAATAAGTGTCTTA 58.515 41.667 0.00 0.00 0.00 2.10
3184 4036 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
3185 4037 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3186 4038 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3187 4039 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
3188 4040 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3189 4041 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3190 4042 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3191 4043 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3192 4044 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3193 4045 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3194 4046 1.557832 CATACTCCCTCCGTCCCAAAA 59.442 52.381 0.00 0.00 0.00 2.44
3195 4047 1.200519 CATACTCCCTCCGTCCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
3196 4048 0.042131 ACATACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
3197 4049 0.042131 AACATACTCCCTCCGTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
3198 4050 1.201424 AAACATACTCCCTCCGTCCC 58.799 55.000 0.00 0.00 0.00 4.46
3199 4051 3.007635 CAAAAACATACTCCCTCCGTCC 58.992 50.000 0.00 0.00 0.00 4.79
3200 4052 3.007635 CCAAAAACATACTCCCTCCGTC 58.992 50.000 0.00 0.00 0.00 4.79
3201 4053 2.290705 CCCAAAAACATACTCCCTCCGT 60.291 50.000 0.00 0.00 0.00 4.69
3202 4054 2.026636 TCCCAAAAACATACTCCCTCCG 60.027 50.000 0.00 0.00 0.00 4.63
3203 4055 3.732048 TCCCAAAAACATACTCCCTCC 57.268 47.619 0.00 0.00 0.00 4.30
3204 4056 6.002653 ACTATCCCAAAAACATACTCCCTC 57.997 41.667 0.00 0.00 0.00 4.30
3205 4057 6.402981 AACTATCCCAAAAACATACTCCCT 57.597 37.500 0.00 0.00 0.00 4.20
3206 4058 7.039293 ACAAAACTATCCCAAAAACATACTCCC 60.039 37.037 0.00 0.00 0.00 4.30
3207 4059 7.892609 ACAAAACTATCCCAAAAACATACTCC 58.107 34.615 0.00 0.00 0.00 3.85
3212 4064 9.541143 CACTTTACAAAACTATCCCAAAAACAT 57.459 29.630 0.00 0.00 0.00 2.71
3215 4067 8.307582 TCCACTTTACAAAACTATCCCAAAAA 57.692 30.769 0.00 0.00 0.00 1.94
3335 4189 1.802880 CGGTAAGTGCTTCCTGGATCG 60.803 57.143 0.00 0.00 0.00 3.69
3467 4322 0.684535 TTGGATCACGCTCCTGTTGA 59.315 50.000 0.00 0.00 36.20 3.18
3868 4723 0.320946 CCTCAACGCCGAAACCCTTA 60.321 55.000 0.00 0.00 0.00 2.69
3955 4810 5.106396 CCATCAGTTTGACAAGTCCAGAATC 60.106 44.000 0.00 0.00 0.00 2.52
4029 4884 6.780706 TTCTTTGCAACTTACTACTAGCAC 57.219 37.500 0.00 0.00 0.00 4.40
4034 4889 9.066892 TGATTCAATTCTTTGCAACTTACTACT 57.933 29.630 0.00 0.00 32.61 2.57
4035 4890 9.846248 ATGATTCAATTCTTTGCAACTTACTAC 57.154 29.630 0.00 0.00 32.61 2.73
4104 4973 3.201353 TGTCGGTTCTGACCAAAATCA 57.799 42.857 8.96 0.00 46.91 2.57
4116 4985 3.913089 AGGCAATGAAAATTGTCGGTTC 58.087 40.909 0.85 0.00 40.77 3.62
4145 5014 7.982354 GCAGAGGTAGTACAGAAGAAAACATAT 59.018 37.037 2.06 0.00 0.00 1.78
4269 5141 0.447801 GTTAGTGCAGCCATGGTTCG 59.552 55.000 14.67 3.10 0.00 3.95
4396 5301 7.290110 TGCTTATTTCTCCTCGATATCTCAA 57.710 36.000 0.34 0.00 0.00 3.02
4400 5305 7.275341 CACTGATGCTTATTTCTCCTCGATATC 59.725 40.741 0.00 0.00 0.00 1.63
4412 5317 5.539955 AGGGTTTGTTCACTGATGCTTATTT 59.460 36.000 0.00 0.00 0.00 1.40
4595 5504 1.933181 TGCGAACAGAAGCGATTATGG 59.067 47.619 13.12 0.00 35.87 2.74
4690 5599 5.071250 ACAGGGAAATATAACAGTCGCCATA 59.929 40.000 0.00 0.00 0.00 2.74
4696 5605 9.535878 CTAAGAGAACAGGGAAATATAACAGTC 57.464 37.037 0.00 0.00 0.00 3.51
4712 5621 7.004555 TGCCTTTGATAAGACTAAGAGAACA 57.995 36.000 0.00 0.00 32.92 3.18
4765 5683 3.543680 AGCGTATCACAGTTAGGCAAT 57.456 42.857 0.95 0.00 33.91 3.56
4787 5705 8.887264 ACCAGAGCATATACTAATAGCTAGTT 57.113 34.615 0.00 0.00 41.35 2.24
4799 5717 6.226787 AGCAGACAATAACCAGAGCATATAC 58.773 40.000 0.00 0.00 0.00 1.47
4803 5721 3.641434 AGCAGACAATAACCAGAGCAT 57.359 42.857 0.00 0.00 0.00 3.79
4805 5723 2.869192 GCTAGCAGACAATAACCAGAGC 59.131 50.000 10.63 0.00 0.00 4.09
4895 5814 4.648307 TGAATTGCACCATATACATTGGCA 59.352 37.500 0.00 0.00 37.81 4.92
4920 5839 1.599542 GGAAGTGTTGCGATAGGATGC 59.400 52.381 0.00 0.00 35.16 3.91
4929 5848 2.032549 CAGAGTTTCAGGAAGTGTTGCG 60.033 50.000 0.00 0.00 0.00 4.85
4940 5859 3.005472 TGGGTAGTCGTTCAGAGTTTCAG 59.995 47.826 0.00 0.00 33.80 3.02
4941 5860 2.960384 TGGGTAGTCGTTCAGAGTTTCA 59.040 45.455 0.00 0.00 33.80 2.69
4943 5862 2.963782 AGTGGGTAGTCGTTCAGAGTTT 59.036 45.455 0.00 0.00 33.80 2.66
4944 5863 2.557490 GAGTGGGTAGTCGTTCAGAGTT 59.443 50.000 0.00 0.00 33.80 3.01
4946 5865 1.130749 CGAGTGGGTAGTCGTTCAGAG 59.869 57.143 0.00 0.00 43.16 3.35
4948 5867 3.696782 CGAGTGGGTAGTCGTTCAG 57.303 57.895 0.00 0.00 43.16 3.02
4963 5882 1.675310 TGATGCCCAAACCAGCGAG 60.675 57.895 0.00 0.00 0.00 5.03
4964 5883 1.971167 GTGATGCCCAAACCAGCGA 60.971 57.895 0.00 0.00 0.00 4.93
4965 5884 2.568090 GTGATGCCCAAACCAGCG 59.432 61.111 0.00 0.00 0.00 5.18
4966 5885 2.973082 GGTGATGCCCAAACCAGC 59.027 61.111 0.00 0.00 33.94 4.85
4968 5887 1.303236 CTCGGTGATGCCCAAACCA 60.303 57.895 0.00 0.00 33.30 3.67
4969 5888 2.046285 CCTCGGTGATGCCCAAACC 61.046 63.158 0.00 0.00 0.00 3.27
4970 5889 1.002624 TCCTCGGTGATGCCCAAAC 60.003 57.895 0.00 0.00 0.00 2.93
4971 5890 1.198094 TCTCCTCGGTGATGCCCAAA 61.198 55.000 0.00 0.00 0.00 3.28
4972 5891 0.982852 ATCTCCTCGGTGATGCCCAA 60.983 55.000 0.03 0.00 0.00 4.12
4992 5928 2.224719 GCAATCATAGGAGAGGTGCCAT 60.225 50.000 0.00 0.00 30.39 4.40
4993 5929 1.141657 GCAATCATAGGAGAGGTGCCA 59.858 52.381 0.00 0.00 30.39 4.92
4995 5931 1.506493 CGCAATCATAGGAGAGGTGC 58.494 55.000 0.00 0.00 32.23 5.01
4996 5932 1.875576 GCCGCAATCATAGGAGAGGTG 60.876 57.143 0.00 0.00 0.00 4.00
4997 5933 0.394565 GCCGCAATCATAGGAGAGGT 59.605 55.000 0.00 0.00 0.00 3.85
4998 5934 0.394192 TGCCGCAATCATAGGAGAGG 59.606 55.000 0.00 0.00 0.00 3.69
4999 5935 1.506493 GTGCCGCAATCATAGGAGAG 58.494 55.000 0.00 0.00 0.00 3.20
5000 5936 0.106708 GGTGCCGCAATCATAGGAGA 59.893 55.000 0.00 0.00 0.00 3.71
5003 5939 0.594602 CATGGTGCCGCAATCATAGG 59.405 55.000 9.34 0.00 0.00 2.57
5004 5940 0.594602 CCATGGTGCCGCAATCATAG 59.405 55.000 2.57 1.06 0.00 2.23
5006 5942 2.129146 CCCATGGTGCCGCAATCAT 61.129 57.895 11.73 0.00 0.00 2.45
5007 5943 2.755064 CCCATGGTGCCGCAATCA 60.755 61.111 11.73 0.00 0.00 2.57
5013 5956 1.247419 TAACAAAGCCCATGGTGCCG 61.247 55.000 18.29 11.53 0.00 5.69
5042 5985 7.162761 AGATCATGTCTCCAAGATGATGATTC 58.837 38.462 12.21 8.22 45.68 2.52
5132 6077 1.359848 GAAGCACCACCGTAGACATG 58.640 55.000 0.00 0.00 0.00 3.21
5142 6087 0.517316 GTCATGAACGGAAGCACCAC 59.483 55.000 0.00 0.00 38.90 4.16
5155 6100 1.293179 CTCACCACCGCTGTCATGA 59.707 57.895 0.00 0.00 0.00 3.07
5168 6113 1.334869 CAACCAAACAGAGTGCTCACC 59.665 52.381 1.82 0.00 0.00 4.02
5169 6114 1.268743 GCAACCAAACAGAGTGCTCAC 60.269 52.381 1.82 0.00 0.00 3.51
5170 6115 1.024271 GCAACCAAACAGAGTGCTCA 58.976 50.000 1.82 0.00 0.00 4.26
5171 6116 1.024271 TGCAACCAAACAGAGTGCTC 58.976 50.000 0.00 0.00 0.00 4.26
5172 6117 1.696063 ATGCAACCAAACAGAGTGCT 58.304 45.000 0.00 0.00 0.00 4.40
5173 6118 2.514205 AATGCAACCAAACAGAGTGC 57.486 45.000 0.00 0.00 0.00 4.40
5174 6119 4.431809 TGAAAATGCAACCAAACAGAGTG 58.568 39.130 0.00 0.00 0.00 3.51
5175 6120 4.734398 TGAAAATGCAACCAAACAGAGT 57.266 36.364 0.00 0.00 0.00 3.24
5176 6121 5.535333 AGATGAAAATGCAACCAAACAGAG 58.465 37.500 0.00 0.00 0.00 3.35
5177 6122 5.068855 TGAGATGAAAATGCAACCAAACAGA 59.931 36.000 0.00 0.00 0.00 3.41
5178 6123 5.291178 TGAGATGAAAATGCAACCAAACAG 58.709 37.500 0.00 0.00 0.00 3.16
5179 6124 5.273674 TGAGATGAAAATGCAACCAAACA 57.726 34.783 0.00 0.00 0.00 2.83
5180 6125 4.151157 GCTGAGATGAAAATGCAACCAAAC 59.849 41.667 0.00 0.00 0.00 2.93
5181 6126 4.202233 TGCTGAGATGAAAATGCAACCAAA 60.202 37.500 0.00 0.00 0.00 3.28
5182 6127 3.321396 TGCTGAGATGAAAATGCAACCAA 59.679 39.130 0.00 0.00 0.00 3.67
5183 6128 2.892215 TGCTGAGATGAAAATGCAACCA 59.108 40.909 0.00 0.00 0.00 3.67
5184 6129 3.581024 TGCTGAGATGAAAATGCAACC 57.419 42.857 0.00 0.00 0.00 3.77
5185 6130 5.888105 ACTATGCTGAGATGAAAATGCAAC 58.112 37.500 0.00 0.00 34.07 4.17
5186 6131 6.071784 ACAACTATGCTGAGATGAAAATGCAA 60.072 34.615 0.00 0.00 34.07 4.08
5187 6132 5.416639 ACAACTATGCTGAGATGAAAATGCA 59.583 36.000 0.00 0.00 34.88 3.96
5188 6133 5.888105 ACAACTATGCTGAGATGAAAATGC 58.112 37.500 3.36 0.00 0.00 3.56
5189 6134 6.971184 GGAACAACTATGCTGAGATGAAAATG 59.029 38.462 3.36 0.00 0.00 2.32
5190 6135 6.096001 GGGAACAACTATGCTGAGATGAAAAT 59.904 38.462 3.36 0.00 0.00 1.82
5191 6136 5.415701 GGGAACAACTATGCTGAGATGAAAA 59.584 40.000 3.36 0.00 0.00 2.29
5192 6137 4.943705 GGGAACAACTATGCTGAGATGAAA 59.056 41.667 3.36 0.00 0.00 2.69
5193 6138 4.225942 AGGGAACAACTATGCTGAGATGAA 59.774 41.667 3.36 0.00 0.00 2.57
5194 6139 3.776969 AGGGAACAACTATGCTGAGATGA 59.223 43.478 3.36 0.00 0.00 2.92
5195 6140 4.125703 GAGGGAACAACTATGCTGAGATG 58.874 47.826 0.00 0.00 0.00 2.90
5196 6141 4.036518 AGAGGGAACAACTATGCTGAGAT 58.963 43.478 0.00 0.00 0.00 2.75
5197 6142 3.445008 AGAGGGAACAACTATGCTGAGA 58.555 45.455 0.00 0.00 0.00 3.27
5198 6143 3.902881 AGAGGGAACAACTATGCTGAG 57.097 47.619 0.00 0.00 0.00 3.35
5199 6144 3.307691 CCAAGAGGGAACAACTATGCTGA 60.308 47.826 0.00 0.00 40.01 4.26
5200 6145 3.012518 CCAAGAGGGAACAACTATGCTG 58.987 50.000 0.00 0.00 40.01 4.41
5201 6146 2.644798 ACCAAGAGGGAACAACTATGCT 59.355 45.455 0.00 0.00 41.15 3.79
5202 6147 2.749621 CACCAAGAGGGAACAACTATGC 59.250 50.000 0.00 0.00 41.15 3.14
5203 6148 2.749621 GCACCAAGAGGGAACAACTATG 59.250 50.000 0.00 0.00 41.15 2.23
5204 6149 2.375174 TGCACCAAGAGGGAACAACTAT 59.625 45.455 0.00 0.00 41.15 2.12
5205 6150 1.771854 TGCACCAAGAGGGAACAACTA 59.228 47.619 0.00 0.00 41.15 2.24
5206 6151 0.550914 TGCACCAAGAGGGAACAACT 59.449 50.000 0.00 0.00 41.15 3.16
5207 6152 1.270550 CATGCACCAAGAGGGAACAAC 59.729 52.381 0.00 0.00 41.15 3.32
5208 6153 1.619654 CATGCACCAAGAGGGAACAA 58.380 50.000 0.00 0.00 41.15 2.83
5209 6154 0.895100 GCATGCACCAAGAGGGAACA 60.895 55.000 14.21 0.00 41.15 3.18
5210 6155 0.610232 AGCATGCACCAAGAGGGAAC 60.610 55.000 21.98 0.00 41.15 3.62
5211 6156 0.322816 GAGCATGCACCAAGAGGGAA 60.323 55.000 21.98 0.00 41.15 3.97
5212 6157 1.300963 GAGCATGCACCAAGAGGGA 59.699 57.895 21.98 0.00 41.15 4.20
5213 6158 0.395311 ATGAGCATGCACCAAGAGGG 60.395 55.000 21.98 0.00 44.81 4.30
5214 6159 1.022735 GATGAGCATGCACCAAGAGG 58.977 55.000 21.98 0.00 42.21 3.69
5215 6160 1.941294 GAGATGAGCATGCACCAAGAG 59.059 52.381 21.98 0.00 0.00 2.85
5216 6161 1.279846 TGAGATGAGCATGCACCAAGA 59.720 47.619 21.98 0.00 0.00 3.02
5217 6162 1.671328 CTGAGATGAGCATGCACCAAG 59.329 52.381 21.98 7.67 0.00 3.61
5218 6163 1.746470 CTGAGATGAGCATGCACCAA 58.254 50.000 21.98 1.97 0.00 3.67
5219 6164 0.746923 GCTGAGATGAGCATGCACCA 60.747 55.000 21.98 17.37 38.95 4.17
5220 6165 0.746923 TGCTGAGATGAGCATGCACC 60.747 55.000 21.98 11.80 44.16 5.01
5221 6166 2.776659 TGCTGAGATGAGCATGCAC 58.223 52.632 21.98 15.08 44.16 4.57
5227 6172 4.127907 TGAAGATGAATGCTGAGATGAGC 58.872 43.478 0.00 0.00 39.62 4.26
5228 6173 5.334491 GCATGAAGATGAATGCTGAGATGAG 60.334 44.000 0.00 0.00 44.64 2.90
5229 6174 4.515567 GCATGAAGATGAATGCTGAGATGA 59.484 41.667 0.00 0.00 44.64 2.92
5230 6175 4.788690 GCATGAAGATGAATGCTGAGATG 58.211 43.478 0.00 0.00 44.64 2.90
5231 6176 9.808869 AGGATGCATGAAGATGAATGCTGAGAT 62.809 40.741 2.46 0.00 43.12 2.75
5232 6177 8.601672 AGGATGCATGAAGATGAATGCTGAGA 62.602 42.308 2.46 0.00 43.12 3.27
5233 6178 6.492836 AGGATGCATGAAGATGAATGCTGAG 61.493 44.000 2.46 0.00 43.12 3.35
5234 6179 4.688874 AGGATGCATGAAGATGAATGCTGA 60.689 41.667 2.46 0.00 43.12 4.26
5235 6180 3.570125 AGGATGCATGAAGATGAATGCTG 59.430 43.478 2.46 0.00 43.12 4.41
5236 6181 3.821600 GAGGATGCATGAAGATGAATGCT 59.178 43.478 2.46 0.00 46.47 3.79
5238 6183 4.399219 AGGAGGATGCATGAAGATGAATG 58.601 43.478 2.46 0.00 26.37 2.67
5239 6184 4.726035 AGGAGGATGCATGAAGATGAAT 57.274 40.909 2.46 0.00 29.31 2.57
5240 6185 4.657504 ACTAGGAGGATGCATGAAGATGAA 59.342 41.667 2.46 0.00 0.00 2.57
5241 6186 4.040095 CACTAGGAGGATGCATGAAGATGA 59.960 45.833 2.46 0.00 0.00 2.92
5242 6187 4.202336 ACACTAGGAGGATGCATGAAGATG 60.202 45.833 2.46 0.00 0.00 2.90
5243 6188 3.972638 ACACTAGGAGGATGCATGAAGAT 59.027 43.478 2.46 0.00 0.00 2.40
5244 6189 3.378512 ACACTAGGAGGATGCATGAAGA 58.621 45.455 2.46 0.00 0.00 2.87
5245 6190 3.834489 ACACTAGGAGGATGCATGAAG 57.166 47.619 2.46 0.00 0.00 3.02
5246 6191 5.894298 AATACACTAGGAGGATGCATGAA 57.106 39.130 2.46 0.00 0.00 2.57
5247 6192 5.894298 AAATACACTAGGAGGATGCATGA 57.106 39.130 2.46 0.00 0.00 3.07
5248 6193 7.164122 ACATAAATACACTAGGAGGATGCATG 58.836 38.462 2.46 0.00 0.00 4.06
5249 6194 7.321717 ACATAAATACACTAGGAGGATGCAT 57.678 36.000 0.00 0.00 0.00 3.96
5250 6195 6.747414 ACATAAATACACTAGGAGGATGCA 57.253 37.500 0.00 0.00 0.00 3.96
5251 6196 9.209175 CTTAACATAAATACACTAGGAGGATGC 57.791 37.037 0.00 0.00 0.00 3.91
5252 6197 9.209175 GCTTAACATAAATACACTAGGAGGATG 57.791 37.037 0.00 0.00 0.00 3.51
5253 6198 9.160412 AGCTTAACATAAATACACTAGGAGGAT 57.840 33.333 0.00 0.00 0.00 3.24
5254 6199 8.548880 AGCTTAACATAAATACACTAGGAGGA 57.451 34.615 0.00 0.00 0.00 3.71
5255 6200 9.915629 CTAGCTTAACATAAATACACTAGGAGG 57.084 37.037 0.00 0.00 0.00 4.30
5258 6203 8.979574 GCACTAGCTTAACATAAATACACTAGG 58.020 37.037 0.00 0.00 37.91 3.02
5259 6204 8.691727 CGCACTAGCTTAACATAAATACACTAG 58.308 37.037 0.00 0.00 39.10 2.57
5260 6205 7.650504 CCGCACTAGCTTAACATAAATACACTA 59.349 37.037 0.00 0.00 39.10 2.74
5261 6206 6.479001 CCGCACTAGCTTAACATAAATACACT 59.521 38.462 0.00 0.00 39.10 3.55
5262 6207 6.477688 TCCGCACTAGCTTAACATAAATACAC 59.522 38.462 0.00 0.00 39.10 2.90
5263 6208 6.477688 GTCCGCACTAGCTTAACATAAATACA 59.522 38.462 0.00 0.00 39.10 2.29
5264 6209 6.700520 AGTCCGCACTAGCTTAACATAAATAC 59.299 38.462 0.00 0.00 39.10 1.89
5265 6210 6.812998 AGTCCGCACTAGCTTAACATAAATA 58.187 36.000 0.00 0.00 39.10 1.40
5266 6211 5.671493 AGTCCGCACTAGCTTAACATAAAT 58.329 37.500 0.00 0.00 39.10 1.40
5267 6212 5.080969 AGTCCGCACTAGCTTAACATAAA 57.919 39.130 0.00 0.00 39.10 1.40
5268 6213 4.158949 TGAGTCCGCACTAGCTTAACATAA 59.841 41.667 0.00 0.00 39.10 1.90
5269 6214 3.697542 TGAGTCCGCACTAGCTTAACATA 59.302 43.478 0.00 0.00 39.10 2.29
5270 6215 2.496070 TGAGTCCGCACTAGCTTAACAT 59.504 45.455 0.00 0.00 39.10 2.71
5271 6216 1.890489 TGAGTCCGCACTAGCTTAACA 59.110 47.619 0.00 0.00 39.10 2.41
5272 6217 2.649331 TGAGTCCGCACTAGCTTAAC 57.351 50.000 0.00 0.00 39.10 2.01
5273 6218 2.738643 GCATGAGTCCGCACTAGCTTAA 60.739 50.000 0.00 0.00 39.10 1.85
5274 6219 1.202417 GCATGAGTCCGCACTAGCTTA 60.202 52.381 0.00 0.00 39.10 3.09
5275 6220 0.460987 GCATGAGTCCGCACTAGCTT 60.461 55.000 0.00 0.00 39.10 3.74
5276 6221 1.142748 GCATGAGTCCGCACTAGCT 59.857 57.895 0.00 0.00 39.10 3.32
5277 6222 0.531532 ATGCATGAGTCCGCACTAGC 60.532 55.000 0.00 0.00 41.79 3.42
5278 6223 1.495878 GATGCATGAGTCCGCACTAG 58.504 55.000 2.46 0.00 41.79 2.57
5279 6224 0.104855 GGATGCATGAGTCCGCACTA 59.895 55.000 2.46 0.00 41.79 2.74
5280 6225 1.153289 GGATGCATGAGTCCGCACT 60.153 57.895 2.46 0.00 41.79 4.40
5281 6226 0.745845 AAGGATGCATGAGTCCGCAC 60.746 55.000 2.46 2.25 41.79 5.34
5282 6227 0.462581 GAAGGATGCATGAGTCCGCA 60.463 55.000 2.46 6.78 43.45 5.69
5283 6228 0.462581 TGAAGGATGCATGAGTCCGC 60.463 55.000 2.46 0.00 39.54 5.54
5284 6229 2.251409 ATGAAGGATGCATGAGTCCG 57.749 50.000 2.46 0.00 39.54 4.79
5285 6230 3.812053 GTGTATGAAGGATGCATGAGTCC 59.188 47.826 2.46 0.00 33.21 3.85
5286 6231 3.812053 GGTGTATGAAGGATGCATGAGTC 59.188 47.826 2.46 0.00 33.21 3.36
5287 6232 3.434167 GGGTGTATGAAGGATGCATGAGT 60.434 47.826 2.46 0.00 33.21 3.41
5288 6233 3.144506 GGGTGTATGAAGGATGCATGAG 58.855 50.000 2.46 0.00 33.21 2.90
5289 6234 2.779430 AGGGTGTATGAAGGATGCATGA 59.221 45.455 2.46 0.00 33.21 3.07
5290 6235 3.219176 AGGGTGTATGAAGGATGCATG 57.781 47.619 2.46 0.00 33.21 4.06
5291 6236 3.073062 GGTAGGGTGTATGAAGGATGCAT 59.927 47.826 0.00 0.00 38.50 3.96
5292 6237 2.438021 GGTAGGGTGTATGAAGGATGCA 59.562 50.000 0.00 0.00 0.00 3.96
5293 6238 2.438021 TGGTAGGGTGTATGAAGGATGC 59.562 50.000 0.00 0.00 0.00 3.91
5294 6239 4.771114 TTGGTAGGGTGTATGAAGGATG 57.229 45.455 0.00 0.00 0.00 3.51
5295 6240 4.538490 TGTTTGGTAGGGTGTATGAAGGAT 59.462 41.667 0.00 0.00 0.00 3.24
5296 6241 3.911260 TGTTTGGTAGGGTGTATGAAGGA 59.089 43.478 0.00 0.00 0.00 3.36
5297 6242 4.007659 GTGTTTGGTAGGGTGTATGAAGG 58.992 47.826 0.00 0.00 0.00 3.46
5298 6243 4.454504 GTGTGTTTGGTAGGGTGTATGAAG 59.545 45.833 0.00 0.00 0.00 3.02
5299 6244 4.391155 GTGTGTTTGGTAGGGTGTATGAA 58.609 43.478 0.00 0.00 0.00 2.57
5300 6245 3.244630 GGTGTGTTTGGTAGGGTGTATGA 60.245 47.826 0.00 0.00 0.00 2.15
5301 6246 3.078837 GGTGTGTTTGGTAGGGTGTATG 58.921 50.000 0.00 0.00 0.00 2.39
5302 6247 2.040679 GGGTGTGTTTGGTAGGGTGTAT 59.959 50.000 0.00 0.00 0.00 2.29
5303 6248 1.420891 GGGTGTGTTTGGTAGGGTGTA 59.579 52.381 0.00 0.00 0.00 2.90
5304 6249 0.184211 GGGTGTGTTTGGTAGGGTGT 59.816 55.000 0.00 0.00 0.00 4.16
5305 6250 0.887387 CGGGTGTGTTTGGTAGGGTG 60.887 60.000 0.00 0.00 0.00 4.61
5306 6251 1.055551 TCGGGTGTGTTTGGTAGGGT 61.056 55.000 0.00 0.00 0.00 4.34
5307 6252 0.604511 GTCGGGTGTGTTTGGTAGGG 60.605 60.000 0.00 0.00 0.00 3.53
5308 6253 0.395312 AGTCGGGTGTGTTTGGTAGG 59.605 55.000 0.00 0.00 0.00 3.18
5309 6254 1.871039 CAAGTCGGGTGTGTTTGGTAG 59.129 52.381 0.00 0.00 0.00 3.18
5310 6255 1.475392 CCAAGTCGGGTGTGTTTGGTA 60.475 52.381 0.00 0.00 34.88 3.25
5311 6256 0.750182 CCAAGTCGGGTGTGTTTGGT 60.750 55.000 0.00 0.00 34.88 3.67
5312 6257 0.464735 TCCAAGTCGGGTGTGTTTGG 60.465 55.000 0.00 0.00 39.66 3.28
5313 6258 1.384525 TTCCAAGTCGGGTGTGTTTG 58.615 50.000 0.00 0.00 34.36 2.93
5314 6259 1.953686 CATTCCAAGTCGGGTGTGTTT 59.046 47.619 0.00 0.00 34.36 2.83
5315 6260 1.133915 ACATTCCAAGTCGGGTGTGTT 60.134 47.619 0.00 0.00 34.14 3.32
5316 6261 0.472471 ACATTCCAAGTCGGGTGTGT 59.528 50.000 0.00 0.00 34.14 3.72
5317 6262 2.346803 CTACATTCCAAGTCGGGTGTG 58.653 52.381 0.00 0.00 36.08 3.82
5318 6263 1.278127 CCTACATTCCAAGTCGGGTGT 59.722 52.381 0.00 0.00 37.63 4.16
5319 6264 2.012051 GCCTACATTCCAAGTCGGGTG 61.012 57.143 0.00 0.00 34.36 4.61
5320 6265 0.252197 GCCTACATTCCAAGTCGGGT 59.748 55.000 0.00 0.00 34.36 5.28
5321 6266 0.251916 TGCCTACATTCCAAGTCGGG 59.748 55.000 0.00 0.00 34.36 5.14
5322 6267 1.656652 CTGCCTACATTCCAAGTCGG 58.343 55.000 0.00 0.00 0.00 4.79
5323 6268 1.009829 GCTGCCTACATTCCAAGTCG 58.990 55.000 0.00 0.00 0.00 4.18
5324 6269 1.009829 CGCTGCCTACATTCCAAGTC 58.990 55.000 0.00 0.00 0.00 3.01
5325 6270 1.026718 GCGCTGCCTACATTCCAAGT 61.027 55.000 0.00 0.00 0.00 3.16
5326 6271 1.718757 GGCGCTGCCTACATTCCAAG 61.719 60.000 7.64 0.00 46.69 3.61
5327 6272 1.748879 GGCGCTGCCTACATTCCAA 60.749 57.895 7.64 0.00 46.69 3.53
5328 6273 2.124736 GGCGCTGCCTACATTCCA 60.125 61.111 7.64 0.00 46.69 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.