Multiple sequence alignment - TraesCS6D01G289800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G289800 chr6D 100.000 2255 0 0 1 2255 400649894 400652148 0.000000e+00 4165
1 TraesCS6D01G289800 chr6A 90.909 1639 77 28 673 2254 546598854 546600477 0.000000e+00 2135
2 TraesCS6D01G289800 chr6A 84.553 123 8 5 385 506 546598561 546598673 6.580000e-21 111
3 TraesCS6D01G289800 chr6B 83.954 1396 113 44 581 1909 599693024 599694375 0.000000e+00 1234
4 TraesCS6D01G289800 chr6B 93.966 348 17 2 1901 2248 599694445 599694788 7.140000e-145 523
5 TraesCS6D01G289800 chr6B 88.542 96 6 2 49 139 599687329 599687424 6.580000e-21 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G289800 chr6D 400649894 400652148 2254 False 4165.0 4165 100.000 1 2255 1 chr6D.!!$F1 2254
1 TraesCS6D01G289800 chr6A 546598561 546600477 1916 False 1123.0 2135 87.731 385 2254 2 chr6A.!!$F1 1869
2 TraesCS6D01G289800 chr6B 599693024 599694788 1764 False 878.5 1234 88.960 581 2248 2 chr6B.!!$F2 1667

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
41 42 0.108804 TAGGAAAAGTCTGCGCTCCG 60.109 55.0 9.73 0.0 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1359 1504 0.321653 GCCAACCCTGAATCAGACGT 60.322 55.0 12.53 4.5 32.44 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.503458 AGACAGACATCAATGAGAAAATTAGG 57.497 34.615 0.00 0.00 0.00 2.69
26 27 8.324306 AGACAGACATCAATGAGAAAATTAGGA 58.676 33.333 0.00 0.00 0.00 2.94
27 28 8.868522 ACAGACATCAATGAGAAAATTAGGAA 57.131 30.769 0.00 0.00 0.00 3.36
28 29 9.300681 ACAGACATCAATGAGAAAATTAGGAAA 57.699 29.630 0.00 0.00 0.00 3.13
35 36 8.299570 TCAATGAGAAAATTAGGAAAAGTCTGC 58.700 33.333 0.00 0.00 0.00 4.26
36 37 6.241207 TGAGAAAATTAGGAAAAGTCTGCG 57.759 37.500 0.00 0.00 0.00 5.18
37 38 5.048153 AGAAAATTAGGAAAAGTCTGCGC 57.952 39.130 0.00 0.00 0.00 6.09
38 39 4.762251 AGAAAATTAGGAAAAGTCTGCGCT 59.238 37.500 9.73 0.00 0.00 5.92
39 40 4.686839 AAATTAGGAAAAGTCTGCGCTC 57.313 40.909 9.73 0.00 0.00 5.03
40 41 2.094762 TTAGGAAAAGTCTGCGCTCC 57.905 50.000 9.73 5.03 0.00 4.70
41 42 0.108804 TAGGAAAAGTCTGCGCTCCG 60.109 55.000 9.73 0.00 0.00 4.63
42 43 1.374252 GGAAAAGTCTGCGCTCCGA 60.374 57.895 9.73 0.00 0.00 4.55
43 44 0.949105 GGAAAAGTCTGCGCTCCGAA 60.949 55.000 9.73 0.00 0.00 4.30
44 45 1.079503 GAAAAGTCTGCGCTCCGAAT 58.920 50.000 9.73 0.00 0.00 3.34
45 46 0.798776 AAAAGTCTGCGCTCCGAATG 59.201 50.000 9.73 0.00 0.00 2.67
46 47 0.320771 AAAGTCTGCGCTCCGAATGT 60.321 50.000 9.73 0.00 0.00 2.71
47 48 0.320771 AAGTCTGCGCTCCGAATGTT 60.321 50.000 9.73 0.00 0.00 2.71
48 49 0.737715 AGTCTGCGCTCCGAATGTTC 60.738 55.000 9.73 0.00 0.00 3.18
58 59 2.141781 CGAATGTTCGCTCACGTGT 58.858 52.632 16.51 0.00 44.26 4.49
59 60 0.179275 CGAATGTTCGCTCACGTGTG 60.179 55.000 16.51 14.71 44.26 3.82
60 61 0.163788 GAATGTTCGCTCACGTGTGG 59.836 55.000 16.51 10.89 41.18 4.17
61 62 0.531974 AATGTTCGCTCACGTGTGGT 60.532 50.000 16.51 0.00 41.18 4.16
62 63 0.531974 ATGTTCGCTCACGTGTGGTT 60.532 50.000 16.51 0.00 41.18 3.67
63 64 0.741574 TGTTCGCTCACGTGTGGTTT 60.742 50.000 16.51 0.00 41.18 3.27
64 65 0.315869 GTTCGCTCACGTGTGGTTTG 60.316 55.000 16.51 1.29 41.18 2.93
65 66 1.433053 TTCGCTCACGTGTGGTTTGG 61.433 55.000 16.51 0.00 41.18 3.28
66 67 2.177580 CGCTCACGTGTGGTTTGGT 61.178 57.895 16.51 0.00 33.53 3.67
67 68 1.711060 CGCTCACGTGTGGTTTGGTT 61.711 55.000 16.51 0.00 33.53 3.67
68 69 0.248458 GCTCACGTGTGGTTTGGTTG 60.248 55.000 16.51 0.00 0.00 3.77
69 70 0.380378 CTCACGTGTGGTTTGGTTGG 59.620 55.000 16.51 0.00 0.00 3.77
70 71 1.032657 TCACGTGTGGTTTGGTTGGG 61.033 55.000 16.51 0.00 0.00 4.12
71 72 1.000646 ACGTGTGGTTTGGTTGGGT 60.001 52.632 0.00 0.00 0.00 4.51
72 73 0.255318 ACGTGTGGTTTGGTTGGGTA 59.745 50.000 0.00 0.00 0.00 3.69
73 74 0.948678 CGTGTGGTTTGGTTGGGTAG 59.051 55.000 0.00 0.00 0.00 3.18
74 75 1.747898 CGTGTGGTTTGGTTGGGTAGT 60.748 52.381 0.00 0.00 0.00 2.73
75 76 2.380941 GTGTGGTTTGGTTGGGTAGTT 58.619 47.619 0.00 0.00 0.00 2.24
76 77 2.100087 GTGTGGTTTGGTTGGGTAGTTG 59.900 50.000 0.00 0.00 0.00 3.16
77 78 2.025226 TGTGGTTTGGTTGGGTAGTTGA 60.025 45.455 0.00 0.00 0.00 3.18
78 79 2.621526 GTGGTTTGGTTGGGTAGTTGAG 59.378 50.000 0.00 0.00 0.00 3.02
79 80 1.611977 GGTTTGGTTGGGTAGTTGAGC 59.388 52.381 0.00 0.00 0.00 4.26
80 81 2.303175 GTTTGGTTGGGTAGTTGAGCA 58.697 47.619 0.00 0.00 0.00 4.26
81 82 2.691011 GTTTGGTTGGGTAGTTGAGCAA 59.309 45.455 0.00 0.00 0.00 3.91
82 83 2.270352 TGGTTGGGTAGTTGAGCAAG 57.730 50.000 0.00 0.00 0.00 4.01
83 84 1.202879 TGGTTGGGTAGTTGAGCAAGG 60.203 52.381 0.00 0.00 0.00 3.61
84 85 1.073284 GGTTGGGTAGTTGAGCAAGGA 59.927 52.381 0.00 0.00 0.00 3.36
85 86 2.488347 GGTTGGGTAGTTGAGCAAGGAA 60.488 50.000 0.00 0.00 0.00 3.36
86 87 3.421844 GTTGGGTAGTTGAGCAAGGAAT 58.578 45.455 0.00 0.00 0.00 3.01
87 88 3.071874 TGGGTAGTTGAGCAAGGAATG 57.928 47.619 0.00 0.00 0.00 2.67
105 106 8.974408 CAAGGAATGCACAATGAATATAACATG 58.026 33.333 0.00 0.00 0.00 3.21
106 107 8.467963 AGGAATGCACAATGAATATAACATGA 57.532 30.769 0.00 0.00 0.00 3.07
107 108 8.916062 AGGAATGCACAATGAATATAACATGAA 58.084 29.630 0.00 0.00 0.00 2.57
108 109 9.531942 GGAATGCACAATGAATATAACATGAAA 57.468 29.630 0.00 0.00 0.00 2.69
138 139 8.824159 ATATGTCACAGTGAATATAGTGAAGC 57.176 34.615 4.32 0.00 42.03 3.86
139 140 6.036577 TGTCACAGTGAATATAGTGAAGCA 57.963 37.500 4.32 0.00 42.03 3.91
140 141 6.463360 TGTCACAGTGAATATAGTGAAGCAA 58.537 36.000 4.32 0.00 42.03 3.91
141 142 6.934083 TGTCACAGTGAATATAGTGAAGCAAA 59.066 34.615 4.32 0.00 42.03 3.68
142 143 7.607607 TGTCACAGTGAATATAGTGAAGCAAAT 59.392 33.333 4.32 0.00 42.03 2.32
143 144 8.454106 GTCACAGTGAATATAGTGAAGCAAATT 58.546 33.333 4.32 0.00 42.03 1.82
144 145 9.013229 TCACAGTGAATATAGTGAAGCAAATTT 57.987 29.630 0.00 0.00 37.99 1.82
145 146 9.069078 CACAGTGAATATAGTGAAGCAAATTTG 57.931 33.333 14.03 14.03 33.99 2.32
146 147 9.013229 ACAGTGAATATAGTGAAGCAAATTTGA 57.987 29.630 22.31 0.00 0.00 2.69
149 150 9.793252 GTGAATATAGTGAAGCAAATTTGATGT 57.207 29.630 22.31 6.60 0.00 3.06
158 159 9.793252 GTGAAGCAAATTTGATGTTATAGATGT 57.207 29.630 22.31 0.00 0.00 3.06
161 162 9.590451 AAGCAAATTTGATGTTATAGATGTTGG 57.410 29.630 22.31 0.00 0.00 3.77
162 163 8.752187 AGCAAATTTGATGTTATAGATGTTGGT 58.248 29.630 22.31 0.00 0.00 3.67
163 164 9.369904 GCAAATTTGATGTTATAGATGTTGGTT 57.630 29.630 22.31 0.00 0.00 3.67
257 258 8.934023 TGGGACAATATTAAAACTTCAAGTCT 57.066 30.769 0.00 0.00 31.92 3.24
271 272 8.974060 AACTTCAAGTCTACAATTACTTTGGA 57.026 30.769 0.00 0.00 39.80 3.53
272 273 8.974060 ACTTCAAGTCTACAATTACTTTGGAA 57.026 30.769 0.00 0.00 39.80 3.53
273 274 9.574516 ACTTCAAGTCTACAATTACTTTGGAAT 57.425 29.630 0.00 0.00 39.80 3.01
274 275 9.831737 CTTCAAGTCTACAATTACTTTGGAATG 57.168 33.333 0.00 0.00 39.80 2.67
275 276 8.335532 TCAAGTCTACAATTACTTTGGAATGG 57.664 34.615 0.00 0.00 39.80 3.16
276 277 8.160765 TCAAGTCTACAATTACTTTGGAATGGA 58.839 33.333 0.00 0.00 39.80 3.41
277 278 8.454106 CAAGTCTACAATTACTTTGGAATGGAG 58.546 37.037 0.00 0.00 39.80 3.86
278 279 7.112779 AGTCTACAATTACTTTGGAATGGAGG 58.887 38.462 0.00 0.00 39.80 4.30
279 280 6.318900 GTCTACAATTACTTTGGAATGGAGGG 59.681 42.308 0.00 0.00 39.80 4.30
280 281 5.269554 ACAATTACTTTGGAATGGAGGGA 57.730 39.130 0.00 0.00 39.80 4.20
281 282 5.264395 ACAATTACTTTGGAATGGAGGGAG 58.736 41.667 0.00 0.00 39.80 4.30
282 283 5.222337 ACAATTACTTTGGAATGGAGGGAGT 60.222 40.000 0.00 0.00 39.80 3.85
283 284 6.011981 ACAATTACTTTGGAATGGAGGGAGTA 60.012 38.462 0.00 0.00 39.80 2.59
284 285 6.652205 ATTACTTTGGAATGGAGGGAGTAA 57.348 37.500 0.00 0.00 34.02 2.24
285 286 4.302559 ACTTTGGAATGGAGGGAGTAAC 57.697 45.455 0.00 0.00 0.00 2.50
286 287 3.010250 ACTTTGGAATGGAGGGAGTAACC 59.990 47.826 0.00 0.00 38.08 2.85
302 303 7.913674 GGAGTAACCCTGAATGATTCATATC 57.086 40.000 8.50 1.48 39.30 1.63
303 304 7.453393 GGAGTAACCCTGAATGATTCATATCA 58.547 38.462 8.50 5.67 44.52 2.15
304 305 7.939039 GGAGTAACCCTGAATGATTCATATCAA 59.061 37.037 8.50 0.00 43.67 2.57
305 306 9.512588 GAGTAACCCTGAATGATTCATATCAAT 57.487 33.333 8.50 0.00 43.67 2.57
306 307 9.872684 AGTAACCCTGAATGATTCATATCAATT 57.127 29.630 8.50 1.38 43.67 2.32
310 311 8.800332 ACCCTGAATGATTCATATCAATTAAGC 58.200 33.333 8.50 0.00 43.67 3.09
311 312 9.021807 CCCTGAATGATTCATATCAATTAAGCT 57.978 33.333 8.50 0.00 43.67 3.74
347 348 9.527157 TGGAATATCAATTAAGTTCTTGGTTCA 57.473 29.630 0.00 0.00 0.00 3.18
354 355 9.403583 TCAATTAAGTTCTTGGTTCAACTAACT 57.596 29.630 0.00 0.00 38.23 2.24
381 382 8.937634 AATAAATAAAGCTCTTGATTTGCCAG 57.062 30.769 12.90 0.00 35.13 4.85
382 383 4.996788 ATAAAGCTCTTGATTTGCCAGG 57.003 40.909 0.00 0.00 33.52 4.45
383 384 1.553706 AAGCTCTTGATTTGCCAGGG 58.446 50.000 0.00 0.00 0.00 4.45
426 427 1.205417 CAAATGGGCCAATTCGAAGCT 59.795 47.619 11.89 0.00 0.00 3.74
427 428 1.560505 AATGGGCCAATTCGAAGCTT 58.439 45.000 11.89 0.00 0.00 3.74
428 429 2.435372 ATGGGCCAATTCGAAGCTTA 57.565 45.000 11.89 0.00 0.00 3.09
429 430 2.208132 TGGGCCAATTCGAAGCTTAA 57.792 45.000 2.13 0.00 0.00 1.85
436 437 7.068839 TGGGCCAATTCGAAGCTTAATTAATTA 59.931 33.333 2.13 3.71 0.00 1.40
470 471 2.796227 GCACTTGCTGCGGTTTTAC 58.204 52.632 0.00 0.00 35.72 2.01
471 472 0.310854 GCACTTGCTGCGGTTTTACT 59.689 50.000 0.00 0.00 35.72 2.24
472 473 1.663161 GCACTTGCTGCGGTTTTACTC 60.663 52.381 0.00 0.00 35.72 2.59
486 487 2.743636 TTACTCCGAGACAAGCCAAG 57.256 50.000 1.33 0.00 0.00 3.61
496 497 1.666872 CAAGCCAAGCAAGCAAGCC 60.667 57.895 0.00 0.00 34.23 4.35
497 498 1.835712 AAGCCAAGCAAGCAAGCCT 60.836 52.632 0.00 0.00 34.23 4.58
498 499 1.813728 AAGCCAAGCAAGCAAGCCTC 61.814 55.000 0.00 0.00 34.23 4.70
500 501 1.605738 CCAAGCAAGCAAGCCTCCT 60.606 57.895 0.00 0.00 34.23 3.69
520 569 1.217916 TGAACAAAGGGGAGGTCACA 58.782 50.000 0.00 0.00 0.00 3.58
521 570 1.566703 TGAACAAAGGGGAGGTCACAA 59.433 47.619 0.00 0.00 0.00 3.33
526 575 0.905357 AAGGGGAGGTCACAATCTCG 59.095 55.000 0.00 0.00 0.00 4.04
578 631 2.063266 TGTAATTTCGTCCGACAGCAC 58.937 47.619 0.00 0.00 0.00 4.40
579 632 2.288579 TGTAATTTCGTCCGACAGCACT 60.289 45.455 0.00 0.00 0.00 4.40
599 673 7.218773 CAGCACTAATAACCAACATTTCATTCG 59.781 37.037 0.00 0.00 0.00 3.34
609 683 2.489329 ACATTTCATTCGGCAGAACCAG 59.511 45.455 0.00 0.00 39.48 4.00
611 685 1.298157 TTCATTCGGCAGAACCAGCG 61.298 55.000 0.00 0.00 39.48 5.18
613 687 2.954684 ATTCGGCAGAACCAGCGGA 61.955 57.895 0.00 0.00 39.48 5.54
614 688 3.171828 TTCGGCAGAACCAGCGGAA 62.172 57.895 0.00 0.00 45.20 4.30
616 690 2.032681 GGCAGAACCAGCGGAACT 59.967 61.111 1.50 0.00 38.86 3.01
618 692 1.301716 GCAGAACCAGCGGAACTCA 60.302 57.895 1.50 0.00 0.00 3.41
619 693 1.569479 GCAGAACCAGCGGAACTCAC 61.569 60.000 1.50 0.00 0.00 3.51
620 694 0.951040 CAGAACCAGCGGAACTCACC 60.951 60.000 1.50 0.00 0.00 4.02
622 696 0.951040 GAACCAGCGGAACTCACCTG 60.951 60.000 1.50 0.00 0.00 4.00
623 697 1.696097 AACCAGCGGAACTCACCTGT 61.696 55.000 1.50 0.00 0.00 4.00
624 698 0.830444 ACCAGCGGAACTCACCTGTA 60.830 55.000 1.50 0.00 0.00 2.74
696 778 1.289066 CGTCTGGAAGCTTCGGACA 59.711 57.895 31.49 20.69 33.40 4.02
705 787 4.680237 CTTCGGACACGCAGCCCA 62.680 66.667 0.00 0.00 40.69 5.36
802 903 1.732917 CAACCAAGCAGCCAACGAA 59.267 52.632 0.00 0.00 0.00 3.85
817 918 4.974989 GAAACCACCGCGTCCCGT 62.975 66.667 4.92 0.00 34.38 5.28
876 985 0.318699 CACGCGTGTCTTCTGGAAGA 60.319 55.000 30.50 8.74 44.68 2.87
877 986 0.603569 ACGCGTGTCTTCTGGAAGAT 59.396 50.000 12.93 0.00 46.36 2.40
879 988 1.272781 GCGTGTCTTCTGGAAGATCG 58.727 55.000 22.63 22.63 46.36 3.69
880 989 1.272781 CGTGTCTTCTGGAAGATCGC 58.727 55.000 14.88 13.24 46.36 4.58
881 990 1.646189 GTGTCTTCTGGAAGATCGCC 58.354 55.000 14.88 4.52 46.36 5.54
882 991 1.205893 GTGTCTTCTGGAAGATCGCCT 59.794 52.381 14.88 0.00 46.36 5.52
1197 1328 0.329596 AGTGGATCAAGGGCAAGGTC 59.670 55.000 0.00 0.00 0.00 3.85
1219 1350 3.196207 AAGAAGAAGCAGGGCGCCA 62.196 57.895 30.85 0.00 44.04 5.69
1330 1475 1.305201 TCTGTTGGTTTCTTGCGTCC 58.695 50.000 0.00 0.00 0.00 4.79
1333 1478 1.673920 TGTTGGTTTCTTGCGTCCTTC 59.326 47.619 0.00 0.00 0.00 3.46
1363 1512 8.924691 TGGTTGTGTACATATAGTTTTAACGTC 58.075 33.333 0.00 0.00 0.00 4.34
1382 1531 1.303236 TGATTCAGGGTTGGCACCG 60.303 57.895 0.00 0.00 45.39 4.94
1414 1566 6.711194 AGACCATCGATCGTTTTAGATCTCTA 59.289 38.462 15.94 0.00 43.52 2.43
1660 1829 3.877508 GGTCAGTATATGGGAGTTTGCAC 59.122 47.826 0.00 0.00 0.00 4.57
1661 1830 3.555956 GTCAGTATATGGGAGTTTGCACG 59.444 47.826 0.00 0.00 0.00 5.34
1704 1873 5.385617 CATTTCGTCCTTCACAGATGAAAC 58.614 41.667 9.61 0.00 46.52 2.78
1705 1874 2.672714 TCGTCCTTCACAGATGAAACG 58.327 47.619 7.58 7.58 44.74 3.60
1713 1882 2.069273 CACAGATGAAACGGACCTCAC 58.931 52.381 0.00 0.00 0.00 3.51
1724 1893 2.624838 ACGGACCTCACTTTTCGTCTAA 59.375 45.455 0.00 0.00 0.00 2.10
1778 1947 7.551974 ACTGAGAAAGTGATGTGGATATTTCAG 59.448 37.037 0.00 0.00 37.88 3.02
1784 1953 5.587844 AGTGATGTGGATATTTCAGTTCTGC 59.412 40.000 0.00 0.00 0.00 4.26
1913 2126 2.926200 CTCCGTAGAGTTGCAGACATTG 59.074 50.000 0.00 0.00 35.21 2.82
1946 2192 6.881065 TGGTTGGATTCAGAAGAAATGTCTAG 59.119 38.462 0.00 0.00 37.29 2.43
2012 2259 7.644986 AGTTCAACTCAGAAGAATAAACTCG 57.355 36.000 0.00 0.00 0.00 4.18
2059 2314 0.681733 ACGTCAGTGAGTGCAATCCT 59.318 50.000 12.27 5.53 0.00 3.24
2155 2410 5.538433 GCCCATAGGAGCAACCAATTTAATA 59.462 40.000 2.96 0.00 42.04 0.98
2248 2504 6.611613 ACCTAATTCTGTCATCTTCAGTCA 57.388 37.500 0.00 0.00 34.86 3.41
2254 2510 5.982890 TCTGTCATCTTCAGTCATGTACA 57.017 39.130 0.00 0.00 34.86 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.498054 TCCTAATTTTCTCATTGATGTCTGTC 57.502 34.615 0.00 0.00 0.00 3.51
2 3 8.868522 TTCCTAATTTTCTCATTGATGTCTGT 57.131 30.769 0.00 0.00 0.00 3.41
9 10 8.299570 GCAGACTTTTCCTAATTTTCTCATTGA 58.700 33.333 0.00 0.00 0.00 2.57
10 11 7.272084 CGCAGACTTTTCCTAATTTTCTCATTG 59.728 37.037 0.00 0.00 0.00 2.82
11 12 7.308435 CGCAGACTTTTCCTAATTTTCTCATT 58.692 34.615 0.00 0.00 0.00 2.57
12 13 6.623767 GCGCAGACTTTTCCTAATTTTCTCAT 60.624 38.462 0.30 0.00 0.00 2.90
13 14 5.334879 GCGCAGACTTTTCCTAATTTTCTCA 60.335 40.000 0.30 0.00 0.00 3.27
14 15 5.089411 GCGCAGACTTTTCCTAATTTTCTC 58.911 41.667 0.30 0.00 0.00 2.87
15 16 4.762251 AGCGCAGACTTTTCCTAATTTTCT 59.238 37.500 11.47 0.00 0.00 2.52
16 17 5.048153 AGCGCAGACTTTTCCTAATTTTC 57.952 39.130 11.47 0.00 0.00 2.29
17 18 4.082733 GGAGCGCAGACTTTTCCTAATTTT 60.083 41.667 11.47 0.00 0.00 1.82
18 19 3.440522 GGAGCGCAGACTTTTCCTAATTT 59.559 43.478 11.47 0.00 0.00 1.82
19 20 3.010420 GGAGCGCAGACTTTTCCTAATT 58.990 45.455 11.47 0.00 0.00 1.40
20 21 2.633488 GGAGCGCAGACTTTTCCTAAT 58.367 47.619 11.47 0.00 0.00 1.73
21 22 1.671850 CGGAGCGCAGACTTTTCCTAA 60.672 52.381 11.47 0.00 0.00 2.69
22 23 0.108804 CGGAGCGCAGACTTTTCCTA 60.109 55.000 11.47 0.00 0.00 2.94
23 24 1.374758 CGGAGCGCAGACTTTTCCT 60.375 57.895 11.47 0.00 0.00 3.36
24 25 0.949105 TTCGGAGCGCAGACTTTTCC 60.949 55.000 11.47 4.61 0.00 3.13
25 26 1.079503 ATTCGGAGCGCAGACTTTTC 58.920 50.000 11.47 0.00 0.00 2.29
26 27 0.798776 CATTCGGAGCGCAGACTTTT 59.201 50.000 11.47 0.00 0.00 2.27
27 28 0.320771 ACATTCGGAGCGCAGACTTT 60.321 50.000 11.47 0.00 0.00 2.66
28 29 0.320771 AACATTCGGAGCGCAGACTT 60.321 50.000 11.47 0.00 0.00 3.01
29 30 0.737715 GAACATTCGGAGCGCAGACT 60.738 55.000 11.47 0.00 0.00 3.24
30 31 1.710339 GAACATTCGGAGCGCAGAC 59.290 57.895 11.47 0.00 0.00 3.51
31 32 1.805539 CGAACATTCGGAGCGCAGA 60.806 57.895 11.47 2.59 46.30 4.26
32 33 2.697425 CGAACATTCGGAGCGCAG 59.303 61.111 11.47 0.00 46.30 5.18
41 42 0.163788 CCACACGTGAGCGAACATTC 59.836 55.000 25.01 0.00 42.00 2.67
42 43 0.531974 ACCACACGTGAGCGAACATT 60.532 50.000 25.01 0.00 42.00 2.71
43 44 0.531974 AACCACACGTGAGCGAACAT 60.532 50.000 25.01 0.00 42.00 2.71
44 45 0.741574 AAACCACACGTGAGCGAACA 60.742 50.000 25.01 0.00 42.00 3.18
45 46 0.315869 CAAACCACACGTGAGCGAAC 60.316 55.000 25.01 0.00 42.00 3.95
46 47 1.433053 CCAAACCACACGTGAGCGAA 61.433 55.000 25.01 0.00 42.00 4.70
47 48 1.885388 CCAAACCACACGTGAGCGA 60.885 57.895 25.01 0.00 42.00 4.93
48 49 1.711060 AACCAAACCACACGTGAGCG 61.711 55.000 25.01 11.00 44.93 5.03
49 50 0.248458 CAACCAAACCACACGTGAGC 60.248 55.000 25.01 0.00 0.00 4.26
50 51 0.380378 CCAACCAAACCACACGTGAG 59.620 55.000 25.01 15.20 0.00 3.51
51 52 1.032657 CCCAACCAAACCACACGTGA 61.033 55.000 25.01 0.00 0.00 4.35
52 53 1.316706 ACCCAACCAAACCACACGTG 61.317 55.000 15.48 15.48 0.00 4.49
53 54 0.255318 TACCCAACCAAACCACACGT 59.745 50.000 0.00 0.00 0.00 4.49
54 55 0.948678 CTACCCAACCAAACCACACG 59.051 55.000 0.00 0.00 0.00 4.49
55 56 2.061509 ACTACCCAACCAAACCACAC 57.938 50.000 0.00 0.00 0.00 3.82
56 57 2.025226 TCAACTACCCAACCAAACCACA 60.025 45.455 0.00 0.00 0.00 4.17
57 58 2.621526 CTCAACTACCCAACCAAACCAC 59.378 50.000 0.00 0.00 0.00 4.16
58 59 2.938838 CTCAACTACCCAACCAAACCA 58.061 47.619 0.00 0.00 0.00 3.67
59 60 1.611977 GCTCAACTACCCAACCAAACC 59.388 52.381 0.00 0.00 0.00 3.27
60 61 2.303175 TGCTCAACTACCCAACCAAAC 58.697 47.619 0.00 0.00 0.00 2.93
61 62 2.738587 TGCTCAACTACCCAACCAAA 57.261 45.000 0.00 0.00 0.00 3.28
62 63 2.582052 CTTGCTCAACTACCCAACCAA 58.418 47.619 0.00 0.00 0.00 3.67
63 64 1.202879 CCTTGCTCAACTACCCAACCA 60.203 52.381 0.00 0.00 0.00 3.67
64 65 1.073284 TCCTTGCTCAACTACCCAACC 59.927 52.381 0.00 0.00 0.00 3.77
65 66 2.561478 TCCTTGCTCAACTACCCAAC 57.439 50.000 0.00 0.00 0.00 3.77
66 67 3.420893 CATTCCTTGCTCAACTACCCAA 58.579 45.455 0.00 0.00 0.00 4.12
67 68 3.071874 CATTCCTTGCTCAACTACCCA 57.928 47.619 0.00 0.00 0.00 4.51
79 80 8.974408 CATGTTATATTCATTGTGCATTCCTTG 58.026 33.333 0.00 0.00 0.00 3.61
80 81 8.916062 TCATGTTATATTCATTGTGCATTCCTT 58.084 29.630 0.00 0.00 0.00 3.36
81 82 8.467963 TCATGTTATATTCATTGTGCATTCCT 57.532 30.769 0.00 0.00 0.00 3.36
82 83 9.531942 TTTCATGTTATATTCATTGTGCATTCC 57.468 29.630 0.00 0.00 0.00 3.01
112 113 9.914131 GCTTCACTATATTCACTGTGACATATA 57.086 33.333 10.56 16.92 38.87 0.86
113 114 8.424133 TGCTTCACTATATTCACTGTGACATAT 58.576 33.333 10.56 16.73 38.87 1.78
114 115 7.781056 TGCTTCACTATATTCACTGTGACATA 58.219 34.615 10.56 11.51 38.87 2.29
115 116 6.643388 TGCTTCACTATATTCACTGTGACAT 58.357 36.000 10.56 9.36 38.87 3.06
116 117 6.036577 TGCTTCACTATATTCACTGTGACA 57.963 37.500 10.56 1.70 38.87 3.58
117 118 6.968131 TTGCTTCACTATATTCACTGTGAC 57.032 37.500 10.56 0.00 38.87 3.67
118 119 8.565896 AATTTGCTTCACTATATTCACTGTGA 57.434 30.769 6.36 6.36 37.62 3.58
119 120 9.069078 CAAATTTGCTTCACTATATTCACTGTG 57.931 33.333 5.01 0.17 0.00 3.66
120 121 9.013229 TCAAATTTGCTTCACTATATTCACTGT 57.987 29.630 13.54 0.00 0.00 3.55
123 124 9.793252 ACATCAAATTTGCTTCACTATATTCAC 57.207 29.630 13.54 0.00 0.00 3.18
132 133 9.793252 ACATCTATAACATCAAATTTGCTTCAC 57.207 29.630 13.54 0.00 0.00 3.18
135 136 9.590451 CCAACATCTATAACATCAAATTTGCTT 57.410 29.630 13.54 6.99 0.00 3.91
136 137 8.752187 ACCAACATCTATAACATCAAATTTGCT 58.248 29.630 13.54 0.29 0.00 3.91
137 138 8.931385 ACCAACATCTATAACATCAAATTTGC 57.069 30.769 13.54 0.00 0.00 3.68
225 226 9.974980 GAAGTTTTAATATTGTCCCAAGTCAAA 57.025 29.630 0.00 0.00 0.00 2.69
226 227 9.137459 TGAAGTTTTAATATTGTCCCAAGTCAA 57.863 29.630 0.00 0.00 0.00 3.18
227 228 8.698973 TGAAGTTTTAATATTGTCCCAAGTCA 57.301 30.769 0.00 0.00 0.00 3.41
228 229 9.626045 CTTGAAGTTTTAATATTGTCCCAAGTC 57.374 33.333 0.00 0.00 0.00 3.01
229 230 9.143155 ACTTGAAGTTTTAATATTGTCCCAAGT 57.857 29.630 0.00 0.00 35.81 3.16
230 231 9.626045 GACTTGAAGTTTTAATATTGTCCCAAG 57.374 33.333 0.00 0.00 34.18 3.61
231 232 9.362151 AGACTTGAAGTTTTAATATTGTCCCAA 57.638 29.630 0.00 0.00 0.00 4.12
232 233 8.934023 AGACTTGAAGTTTTAATATTGTCCCA 57.066 30.769 0.00 0.00 0.00 4.37
245 246 9.403583 TCCAAAGTAATTGTAGACTTGAAGTTT 57.596 29.630 0.00 0.00 36.05 2.66
246 247 8.974060 TCCAAAGTAATTGTAGACTTGAAGTT 57.026 30.769 0.00 0.00 36.05 2.66
247 248 8.974060 TTCCAAAGTAATTGTAGACTTGAAGT 57.026 30.769 0.00 0.00 36.05 3.01
248 249 9.831737 CATTCCAAAGTAATTGTAGACTTGAAG 57.168 33.333 0.00 0.00 36.05 3.02
249 250 8.792633 CCATTCCAAAGTAATTGTAGACTTGAA 58.207 33.333 0.00 0.00 36.05 2.69
250 251 8.160765 TCCATTCCAAAGTAATTGTAGACTTGA 58.839 33.333 0.00 0.00 36.05 3.02
251 252 8.335532 TCCATTCCAAAGTAATTGTAGACTTG 57.664 34.615 0.00 0.00 36.05 3.16
252 253 7.611855 CCTCCATTCCAAAGTAATTGTAGACTT 59.388 37.037 0.00 0.00 37.32 3.01
253 254 7.112779 CCTCCATTCCAAAGTAATTGTAGACT 58.887 38.462 0.00 0.00 37.32 3.24
254 255 6.318900 CCCTCCATTCCAAAGTAATTGTAGAC 59.681 42.308 0.00 0.00 37.32 2.59
255 256 6.216662 TCCCTCCATTCCAAAGTAATTGTAGA 59.783 38.462 0.00 0.00 37.32 2.59
256 257 6.423182 TCCCTCCATTCCAAAGTAATTGTAG 58.577 40.000 0.00 0.00 37.32 2.74
257 258 6.011981 ACTCCCTCCATTCCAAAGTAATTGTA 60.012 38.462 0.00 0.00 37.32 2.41
258 259 5.222337 ACTCCCTCCATTCCAAAGTAATTGT 60.222 40.000 0.00 0.00 37.32 2.71
259 260 5.264395 ACTCCCTCCATTCCAAAGTAATTG 58.736 41.667 0.00 0.00 38.84 2.32
260 261 5.536497 ACTCCCTCCATTCCAAAGTAATT 57.464 39.130 0.00 0.00 0.00 1.40
261 262 6.424032 GTTACTCCCTCCATTCCAAAGTAAT 58.576 40.000 0.00 0.00 32.31 1.89
262 263 5.280830 GGTTACTCCCTCCATTCCAAAGTAA 60.281 44.000 0.00 0.00 0.00 2.24
263 264 4.226620 GGTTACTCCCTCCATTCCAAAGTA 59.773 45.833 0.00 0.00 0.00 2.24
264 265 3.010250 GGTTACTCCCTCCATTCCAAAGT 59.990 47.826 0.00 0.00 0.00 2.66
265 266 3.621558 GGTTACTCCCTCCATTCCAAAG 58.378 50.000 0.00 0.00 0.00 2.77
266 267 3.732048 GGTTACTCCCTCCATTCCAAA 57.268 47.619 0.00 0.00 0.00 3.28
277 278 6.881602 GATATGAATCATTCAGGGTTACTCCC 59.118 42.308 6.19 0.00 44.81 4.30
278 279 7.453393 TGATATGAATCATTCAGGGTTACTCC 58.547 38.462 6.19 0.00 43.98 3.85
279 280 8.908786 TTGATATGAATCATTCAGGGTTACTC 57.091 34.615 6.19 0.00 43.98 2.59
280 281 9.872684 AATTGATATGAATCATTCAGGGTTACT 57.127 29.630 6.19 0.00 43.98 2.24
284 285 8.800332 GCTTAATTGATATGAATCATTCAGGGT 58.200 33.333 6.19 0.00 43.98 4.34
285 286 9.021807 AGCTTAATTGATATGAATCATTCAGGG 57.978 33.333 6.19 0.00 43.98 4.45
321 322 9.527157 TGAACCAAGAACTTAATTGATATTCCA 57.473 29.630 0.00 0.00 0.00 3.53
328 329 9.403583 AGTTAGTTGAACCAAGAACTTAATTGA 57.596 29.630 0.00 0.00 39.02 2.57
355 356 9.374838 CTGGCAAATCAAGAGCTTTATTTATTT 57.625 29.630 2.98 0.00 28.65 1.40
356 357 7.983484 CCTGGCAAATCAAGAGCTTTATTTATT 59.017 33.333 2.98 0.00 28.65 1.40
357 358 7.418254 CCCTGGCAAATCAAGAGCTTTATTTAT 60.418 37.037 2.98 0.00 28.65 1.40
358 359 6.127366 CCCTGGCAAATCAAGAGCTTTATTTA 60.127 38.462 2.98 0.00 28.65 1.40
359 360 5.337813 CCCTGGCAAATCAAGAGCTTTATTT 60.338 40.000 0.00 0.00 29.38 1.40
360 361 4.161001 CCCTGGCAAATCAAGAGCTTTATT 59.839 41.667 0.00 0.00 0.00 1.40
361 362 3.703052 CCCTGGCAAATCAAGAGCTTTAT 59.297 43.478 0.00 0.00 0.00 1.40
362 363 3.091545 CCCTGGCAAATCAAGAGCTTTA 58.908 45.455 0.00 0.00 0.00 1.85
363 364 1.897802 CCCTGGCAAATCAAGAGCTTT 59.102 47.619 0.00 0.00 0.00 3.51
364 365 1.076024 TCCCTGGCAAATCAAGAGCTT 59.924 47.619 0.00 0.00 0.00 3.74
365 366 0.700564 TCCCTGGCAAATCAAGAGCT 59.299 50.000 0.00 0.00 0.00 4.09
366 367 1.549203 TTCCCTGGCAAATCAAGAGC 58.451 50.000 0.00 0.00 0.00 4.09
367 368 4.605640 TTTTTCCCTGGCAAATCAAGAG 57.394 40.909 0.00 0.00 0.00 2.85
402 403 0.179103 CGAATTGGCCCATTTGGAGC 60.179 55.000 8.66 0.00 37.39 4.70
426 427 8.336806 CCTGTCGTGGCGTTTATAATTAATTAA 58.663 33.333 11.80 0.00 0.00 1.40
427 428 7.518689 GCCTGTCGTGGCGTTTATAATTAATTA 60.519 37.037 10.27 10.27 43.74 1.40
428 429 6.721321 CCTGTCGTGGCGTTTATAATTAATT 58.279 36.000 5.89 5.89 0.00 1.40
429 430 5.277634 GCCTGTCGTGGCGTTTATAATTAAT 60.278 40.000 0.00 0.00 43.74 1.40
436 437 3.884900 GCCTGTCGTGGCGTTTAT 58.115 55.556 1.71 0.00 43.74 1.40
463 464 2.074576 GGCTTGTCTCGGAGTAAAACC 58.925 52.381 4.69 2.57 0.00 3.27
464 465 2.762745 TGGCTTGTCTCGGAGTAAAAC 58.237 47.619 4.69 0.00 0.00 2.43
465 466 3.399330 CTTGGCTTGTCTCGGAGTAAAA 58.601 45.455 4.69 0.00 0.00 1.52
466 467 2.870435 GCTTGGCTTGTCTCGGAGTAAA 60.870 50.000 4.69 0.41 0.00 2.01
467 468 1.337823 GCTTGGCTTGTCTCGGAGTAA 60.338 52.381 4.69 1.58 0.00 2.24
468 469 0.246635 GCTTGGCTTGTCTCGGAGTA 59.753 55.000 4.69 0.00 0.00 2.59
469 470 1.004440 GCTTGGCTTGTCTCGGAGT 60.004 57.895 4.69 0.00 0.00 3.85
470 471 0.603707 TTGCTTGGCTTGTCTCGGAG 60.604 55.000 0.00 0.00 0.00 4.63
471 472 0.603707 CTTGCTTGGCTTGTCTCGGA 60.604 55.000 0.00 0.00 0.00 4.55
472 473 1.871772 CTTGCTTGGCTTGTCTCGG 59.128 57.895 0.00 0.00 0.00 4.63
475 476 0.672342 CTTGCTTGCTTGGCTTGTCT 59.328 50.000 0.00 0.00 0.00 3.41
500 501 1.566703 TGTGACCTCCCCTTTGTTCAA 59.433 47.619 0.00 0.00 0.00 2.69
502 503 2.358322 TTGTGACCTCCCCTTTGTTC 57.642 50.000 0.00 0.00 0.00 3.18
520 569 0.456221 AAGACCGATGTCGCGAGATT 59.544 50.000 20.59 4.23 46.51 2.40
521 570 0.248661 CAAGACCGATGTCGCGAGAT 60.249 55.000 19.73 19.73 46.51 2.75
526 575 2.778679 GTGCAAGACCGATGTCGC 59.221 61.111 0.00 0.00 46.51 5.19
554 607 1.336148 TGTCGGACGAAATTACAGCGT 60.336 47.619 3.34 0.00 41.45 5.07
555 608 1.320555 CTGTCGGACGAAATTACAGCG 59.679 52.381 3.34 0.00 32.02 5.18
576 629 6.472163 GCCGAATGAAATGTTGGTTATTAGTG 59.528 38.462 0.00 0.00 0.00 2.74
578 631 6.559810 TGCCGAATGAAATGTTGGTTATTAG 58.440 36.000 0.00 0.00 0.00 1.73
579 632 6.375736 TCTGCCGAATGAAATGTTGGTTATTA 59.624 34.615 0.00 0.00 0.00 0.98
599 673 2.032681 AGTTCCGCTGGTTCTGCC 59.967 61.111 0.00 0.00 37.90 4.85
609 683 0.108756 GGTCTACAGGTGAGTTCCGC 60.109 60.000 0.00 0.00 0.00 5.54
611 685 1.201880 GTCGGTCTACAGGTGAGTTCC 59.798 57.143 0.00 0.00 0.00 3.62
613 687 1.612463 GTGTCGGTCTACAGGTGAGTT 59.388 52.381 0.00 0.00 0.00 3.01
614 688 1.245732 GTGTCGGTCTACAGGTGAGT 58.754 55.000 0.00 0.00 0.00 3.41
616 690 1.859427 GCGTGTCGGTCTACAGGTGA 61.859 60.000 0.00 0.00 37.52 4.02
618 692 2.960170 GCGTGTCGGTCTACAGGT 59.040 61.111 0.00 0.00 37.52 4.00
619 693 2.202440 CGCGTGTCGGTCTACAGG 60.202 66.667 0.00 0.00 38.09 4.00
643 717 4.593864 GGGCCTGCGGAGATCGTC 62.594 72.222 5.10 0.00 41.72 4.20
645 719 4.899239 GTGGGCCTGCGGAGATCG 62.899 72.222 5.10 0.00 42.76 3.69
677 759 1.289380 GTCCGAAGCTTCCAGACGT 59.711 57.895 21.84 0.00 0.00 4.34
680 762 1.289066 CGTGTCCGAAGCTTCCAGA 59.711 57.895 20.62 14.51 35.63 3.86
705 787 2.911143 GGTCCATCCATGCGACCT 59.089 61.111 15.00 0.00 41.19 3.85
708 790 3.738429 CTGCGGTCCATCCATGCGA 62.738 63.158 0.00 0.00 35.57 5.10
711 793 2.903855 GGCTGCGGTCCATCCATG 60.904 66.667 0.00 0.00 35.57 3.66
834 941 1.372128 GAAACGTACGCGGAGGTGT 60.372 57.895 18.72 12.89 43.45 4.16
876 985 1.153168 CAATCAACGGGGAGGCGAT 60.153 57.895 0.00 0.00 0.00 4.58
877 986 2.267642 CAATCAACGGGGAGGCGA 59.732 61.111 0.00 0.00 0.00 5.54
879 988 1.304134 AACCAATCAACGGGGAGGC 60.304 57.895 0.00 0.00 0.00 4.70
880 989 1.595093 GCAACCAATCAACGGGGAGG 61.595 60.000 0.00 0.00 0.00 4.30
881 990 1.595093 GGCAACCAATCAACGGGGAG 61.595 60.000 0.00 0.00 0.00 4.30
882 991 1.605165 GGCAACCAATCAACGGGGA 60.605 57.895 0.00 0.00 0.00 4.81
922 1040 2.552743 GAGAATGGCGGGGTTTTATAGC 59.447 50.000 0.00 0.00 0.00 2.97
1197 1328 1.023513 CGCCCTGCTTCTTCTTCTGG 61.024 60.000 0.00 0.00 0.00 3.86
1238 1369 3.552384 CCTAATACCCGGCGGCCA 61.552 66.667 23.20 10.68 0.00 5.36
1358 1503 1.882352 GCCAACCCTGAATCAGACGTT 60.882 52.381 12.53 10.44 32.44 3.99
1359 1504 0.321653 GCCAACCCTGAATCAGACGT 60.322 55.000 12.53 4.50 32.44 4.34
1363 1512 1.308069 CGGTGCCAACCCTGAATCAG 61.308 60.000 2.68 2.68 44.42 2.90
1382 1531 1.000163 ACGATCGATGGTCTACATGGC 60.000 52.381 24.34 0.00 40.72 4.40
1386 1535 5.823209 TCTAAAACGATCGATGGTCTACA 57.177 39.130 24.34 0.00 0.00 2.74
1392 1541 6.904498 AGTAGAGATCTAAAACGATCGATGG 58.096 40.000 24.34 3.61 43.52 3.51
1426 1578 7.340487 ACAGGACACAAAGAAAGAAGAAAGAAT 59.660 33.333 0.00 0.00 0.00 2.40
1437 1589 4.131649 TCGAGAACAGGACACAAAGAAA 57.868 40.909 0.00 0.00 0.00 2.52
1441 1593 4.066646 TCAATCGAGAACAGGACACAAA 57.933 40.909 0.00 0.00 0.00 2.83
1504 1658 0.463295 CCAATCAGGCATCTGCTCGT 60.463 55.000 1.70 0.00 40.69 4.18
1660 1829 4.740268 TGGAACTATGCAACTGTACTACG 58.260 43.478 0.00 0.00 0.00 3.51
1661 1830 7.464178 CGAAATGGAACTATGCAACTGTACTAC 60.464 40.741 0.00 0.00 0.00 2.73
1704 1873 3.293311 TTAGACGAAAAGTGAGGTCCG 57.707 47.619 0.00 0.00 0.00 4.79
1705 1874 5.348997 CAGAATTAGACGAAAAGTGAGGTCC 59.651 44.000 0.00 0.00 0.00 4.46
1713 1882 7.908082 TGTGTTGAAACAGAATTAGACGAAAAG 59.092 33.333 0.00 0.00 40.05 2.27
1771 1940 2.192664 TTGCCCGCAGAACTGAAATA 57.807 45.000 5.97 0.00 0.00 1.40
1778 1947 1.418373 GTTTGAATTGCCCGCAGAAC 58.582 50.000 0.00 0.00 0.00 3.01
1784 1953 1.135803 CAGTACCGTTTGAATTGCCCG 60.136 52.381 0.00 0.00 0.00 6.13
1913 2126 6.644347 TCTTCTGAATCCAACCATCTCTAAC 58.356 40.000 0.00 0.00 0.00 2.34
1959 2205 3.710209 ATGCTCCATATAGAGGGCAAC 57.290 47.619 3.63 0.00 36.43 4.17
2012 2259 5.106157 CCATTTCAGTAGTTGAATGGTCACC 60.106 44.000 11.25 0.00 44.90 4.02
2032 2279 2.483876 CACTCACTGACGTTCACCATT 58.516 47.619 0.00 0.00 0.00 3.16
2059 2314 7.554835 ACATGCATTCTAAATCCTTTACCGTTA 59.445 33.333 0.00 0.00 0.00 3.18
2223 2479 7.099764 TGACTGAAGATGACAGAATTAGGTTC 58.900 38.462 0.00 0.00 38.55 3.62
2224 2480 7.009179 TGACTGAAGATGACAGAATTAGGTT 57.991 36.000 0.00 0.00 38.55 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.