Multiple sequence alignment - TraesCS6D01G286800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G286800 chr6D 100.000 3155 0 0 1 3155 395389576 395392730 0.000000e+00 5827.0
1 TraesCS6D01G286800 chr6D 83.178 214 30 4 2943 3154 22256703 22256494 1.160000e-44 191.0
2 TraesCS6D01G286800 chr6D 93.478 92 6 0 343 434 395389680 395389771 1.530000e-28 137.0
3 TraesCS6D01G286800 chr6D 93.478 92 6 0 105 196 395389918 395390009 1.530000e-28 137.0
4 TraesCS6D01G286800 chr6B 94.157 2088 73 19 323 2395 591263438 591265491 0.000000e+00 3134.0
5 TraesCS6D01G286800 chr6B 86.473 791 55 10 2400 3155 591265594 591266367 0.000000e+00 821.0
6 TraesCS6D01G286800 chr6B 92.708 96 6 1 102 196 591263454 591263549 1.530000e-28 137.0
7 TraesCS6D01G286800 chr6A 93.578 2102 74 28 323 2395 541594971 541597040 0.000000e+00 3077.0
8 TraesCS6D01G286800 chr6A 88.594 754 59 5 2428 3155 541597690 541598442 0.000000e+00 891.0
9 TraesCS6D01G286800 chr6A 94.792 96 4 1 102 196 541594987 541595082 7.050000e-32 148.0
10 TraesCS6D01G286800 chr3B 85.778 225 30 2 2932 3154 96817854 96817630 1.460000e-58 237.0
11 TraesCS6D01G286800 chr3B 98.182 55 1 0 2758 2812 797550415 797550361 2.590000e-16 97.1
12 TraesCS6D01G286800 chr7D 84.071 226 30 4 2932 3154 375310930 375310708 2.470000e-51 213.0
13 TraesCS6D01G286800 chr1D 84.475 219 25 8 2940 3154 365971892 365971679 1.150000e-49 207.0
14 TraesCS6D01G286800 chr1D 97.059 102 3 0 1 102 90515014 90515115 4.180000e-39 172.0
15 TraesCS6D01G286800 chr5A 83.258 221 33 3 2936 3154 534814575 534814793 1.920000e-47 200.0
16 TraesCS6D01G286800 chr5A 96.190 105 4 0 1 105 350818863 350818967 4.180000e-39 172.0
17 TraesCS6D01G286800 chr3D 82.743 226 32 5 2932 3154 572217970 572217749 8.930000e-46 195.0
18 TraesCS6D01G286800 chr3D 97.087 103 3 0 1 103 579578955 579578853 1.160000e-39 174.0
19 TraesCS6D01G286800 chr3D 96.117 103 4 0 1 103 579562706 579562604 5.410000e-38 169.0
20 TraesCS6D01G286800 chr3D 96.078 102 4 0 1 102 350583176 350583277 1.950000e-37 167.0
21 TraesCS6D01G286800 chr1B 84.375 192 25 4 2965 3154 52554567 52554379 1.930000e-42 183.0
22 TraesCS6D01G286800 chr1B 98.182 55 1 0 2758 2812 583552129 583552183 2.590000e-16 97.1
23 TraesCS6D01G286800 chr1B 96.364 55 2 0 2758 2812 49783100 49783046 1.210000e-14 91.6
24 TraesCS6D01G286800 chr1B 96.364 55 2 0 2758 2812 49819667 49819721 1.210000e-14 91.6
25 TraesCS6D01G286800 chr7A 96.117 103 4 0 1 103 501086622 501086520 5.410000e-38 169.0
26 TraesCS6D01G286800 chr7A 88.991 109 12 0 213 321 211806675 211806783 5.490000e-28 135.0
27 TraesCS6D01G286800 chr2D 96.117 103 4 0 1 103 486003244 486003346 5.410000e-38 169.0
28 TraesCS6D01G286800 chr2D 90.588 85 8 0 2588 2672 650375956 650376040 2.570000e-21 113.0
29 TraesCS6D01G286800 chr2D 96.364 55 2 0 2758 2812 291671309 291671363 1.210000e-14 91.6
30 TraesCS6D01G286800 chr4D 96.078 102 4 0 1 102 108101692 108101793 1.950000e-37 167.0
31 TraesCS6D01G286800 chr4D 95.238 105 5 0 1 105 442183806 442183702 1.950000e-37 167.0
32 TraesCS6D01G286800 chr4A 89.908 109 11 0 213 321 62556669 62556777 1.180000e-29 141.0
33 TraesCS6D01G286800 chr4A 100.000 39 0 0 2720 2758 633425192 633425230 4.370000e-09 73.1
34 TraesCS6D01G286800 chr4A 100.000 39 0 0 2720 2758 633467380 633467418 4.370000e-09 73.1
35 TraesCS6D01G286800 chr4A 100.000 39 0 0 2720 2758 633533499 633533537 4.370000e-09 73.1
36 TraesCS6D01G286800 chr4A 100.000 39 0 0 2720 2758 633580957 633580995 4.370000e-09 73.1
37 TraesCS6D01G286800 chr4A 100.000 39 0 0 2720 2758 633625096 633625134 4.370000e-09 73.1
38 TraesCS6D01G286800 chr4A 100.000 39 0 0 2720 2758 633685973 633686011 4.370000e-09 73.1
39 TraesCS6D01G286800 chr4A 100.000 39 0 0 2720 2758 633740201 633740239 4.370000e-09 73.1
40 TraesCS6D01G286800 chr5B 83.036 112 18 1 213 324 678907661 678907551 2.000000e-17 100.0
41 TraesCS6D01G286800 chr4B 98.182 55 1 0 2758 2812 495535955 495535901 2.590000e-16 97.1
42 TraesCS6D01G286800 chr4B 96.364 55 2 0 2758 2812 310464645 310464591 1.210000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G286800 chr6D 395389576 395392730 3154 False 2033.666667 5827 95.652000 1 3155 3 chr6D.!!$F1 3154
1 TraesCS6D01G286800 chr6B 591263438 591266367 2929 False 1364.000000 3134 91.112667 102 3155 3 chr6B.!!$F1 3053
2 TraesCS6D01G286800 chr6A 541594971 541598442 3471 False 1372.000000 3077 92.321333 102 3155 3 chr6A.!!$F1 3053

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.030101 CGGGCGTCACACAAAAATGT 59.970 50.0 0.00 0.0 0.0 2.71 F
40 41 0.037697 TGTCAGCCGCGTGAAATAGT 60.038 50.0 4.92 0.0 0.0 2.12 F
300 301 0.091344 CGTCGCGTGCAAGTTCTTAG 59.909 55.0 5.77 0.0 0.0 2.18 F
1602 1614 0.178926 TCACGGTGGGGAGAAGGTAA 60.179 55.0 8.50 0.0 0.0 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1395 1407 0.034059 GCTCTGTGCAGTAGTGGTGT 59.966 55.0 0.0 0.0 42.31 4.16 R
1725 1737 1.251251 GTCAGCCCAACATTGAGCTT 58.749 50.0 0.0 0.0 39.34 3.74 R
2027 2059 1.294857 GATCAGCTTCTTCTTCCGCC 58.705 55.0 0.0 0.0 0.00 6.13 R
3099 3893 0.555769 AGACCTTTGCTTTCACCCCA 59.444 50.0 0.0 0.0 0.00 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.586635 GTGTCGGGCGTCACACAA 60.587 61.111 5.81 0.00 42.20 3.33
18 19 2.174969 GTGTCGGGCGTCACACAAA 61.175 57.895 5.81 0.00 42.20 2.83
19 20 1.449778 TGTCGGGCGTCACACAAAA 60.450 52.632 0.00 0.00 0.00 2.44
20 21 1.025113 TGTCGGGCGTCACACAAAAA 61.025 50.000 0.00 0.00 0.00 1.94
21 22 0.309612 GTCGGGCGTCACACAAAAAT 59.690 50.000 0.00 0.00 0.00 1.82
22 23 0.309302 TCGGGCGTCACACAAAAATG 59.691 50.000 0.00 0.00 0.00 2.32
23 24 0.030101 CGGGCGTCACACAAAAATGT 59.970 50.000 0.00 0.00 0.00 2.71
24 25 1.766069 GGGCGTCACACAAAAATGTC 58.234 50.000 0.00 0.00 0.00 3.06
25 26 1.066303 GGGCGTCACACAAAAATGTCA 59.934 47.619 0.00 0.00 0.00 3.58
26 27 2.384382 GGCGTCACACAAAAATGTCAG 58.616 47.619 0.00 0.00 0.00 3.51
27 28 1.780860 GCGTCACACAAAAATGTCAGC 59.219 47.619 0.00 0.00 0.00 4.26
28 29 2.384382 CGTCACACAAAAATGTCAGCC 58.616 47.619 0.00 0.00 0.00 4.85
29 30 2.384382 GTCACACAAAAATGTCAGCCG 58.616 47.619 0.00 0.00 0.00 5.52
30 31 1.130955 CACACAAAAATGTCAGCCGC 58.869 50.000 0.00 0.00 0.00 6.53
31 32 0.317770 ACACAAAAATGTCAGCCGCG 60.318 50.000 0.00 0.00 0.00 6.46
32 33 0.317770 CACAAAAATGTCAGCCGCGT 60.318 50.000 4.92 0.00 0.00 6.01
33 34 0.317770 ACAAAAATGTCAGCCGCGTG 60.318 50.000 4.92 0.00 0.00 5.34
34 35 0.040514 CAAAAATGTCAGCCGCGTGA 60.041 50.000 4.92 0.00 0.00 4.35
35 36 0.665835 AAAAATGTCAGCCGCGTGAA 59.334 45.000 4.92 0.00 0.00 3.18
36 37 0.665835 AAAATGTCAGCCGCGTGAAA 59.334 45.000 4.92 0.00 0.00 2.69
37 38 0.881118 AAATGTCAGCCGCGTGAAAT 59.119 45.000 4.92 0.19 0.00 2.17
38 39 1.732941 AATGTCAGCCGCGTGAAATA 58.267 45.000 4.92 0.00 0.00 1.40
39 40 1.290203 ATGTCAGCCGCGTGAAATAG 58.710 50.000 4.92 0.00 0.00 1.73
40 41 0.037697 TGTCAGCCGCGTGAAATAGT 60.038 50.000 4.92 0.00 0.00 2.12
41 42 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
42 43 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
43 44 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
44 45 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
54 55 5.054390 TGAAATAGTTTCACGGGCAATTC 57.946 39.130 1.24 0.00 44.21 2.17
55 56 4.520874 TGAAATAGTTTCACGGGCAATTCA 59.479 37.500 1.24 0.00 44.21 2.57
56 57 5.184864 TGAAATAGTTTCACGGGCAATTCAT 59.815 36.000 1.24 0.00 44.21 2.57
57 58 5.659440 AATAGTTTCACGGGCAATTCATT 57.341 34.783 0.00 0.00 0.00 2.57
58 59 5.659440 ATAGTTTCACGGGCAATTCATTT 57.341 34.783 0.00 0.00 0.00 2.32
59 60 4.335400 AGTTTCACGGGCAATTCATTTT 57.665 36.364 0.00 0.00 0.00 1.82
60 61 4.057432 AGTTTCACGGGCAATTCATTTTG 58.943 39.130 0.00 0.00 0.00 2.44
61 62 3.742433 TTCACGGGCAATTCATTTTGT 57.258 38.095 0.00 0.00 0.00 2.83
62 63 3.023946 TCACGGGCAATTCATTTTGTG 57.976 42.857 0.00 0.00 0.00 3.33
63 64 2.625314 TCACGGGCAATTCATTTTGTGA 59.375 40.909 0.00 0.00 33.14 3.58
64 65 3.257873 TCACGGGCAATTCATTTTGTGAT 59.742 39.130 0.00 0.00 36.54 3.06
65 66 3.995705 CACGGGCAATTCATTTTGTGATT 59.004 39.130 0.00 0.00 36.54 2.57
66 67 4.451774 CACGGGCAATTCATTTTGTGATTT 59.548 37.500 0.00 0.00 36.54 2.17
67 68 4.451774 ACGGGCAATTCATTTTGTGATTTG 59.548 37.500 7.80 7.80 44.87 2.32
68 69 4.689812 CGGGCAATTCATTTTGTGATTTGA 59.310 37.500 13.67 0.00 44.88 2.69
69 70 5.352016 CGGGCAATTCATTTTGTGATTTGAT 59.648 36.000 13.67 0.00 44.88 2.57
70 71 6.128227 CGGGCAATTCATTTTGTGATTTGATT 60.128 34.615 13.67 0.00 44.88 2.57
71 72 7.573469 CGGGCAATTCATTTTGTGATTTGATTT 60.573 33.333 13.67 0.00 44.88 2.17
72 73 7.751793 GGGCAATTCATTTTGTGATTTGATTTC 59.248 33.333 13.67 0.85 44.88 2.17
73 74 7.479291 GGCAATTCATTTTGTGATTTGATTTCG 59.521 33.333 13.67 0.00 44.88 3.46
74 75 8.011106 GCAATTCATTTTGTGATTTGATTTCGT 58.989 29.630 13.67 0.00 44.88 3.85
75 76 9.519905 CAATTCATTTTGTGATTTGATTTCGTC 57.480 29.630 6.77 0.00 44.88 4.20
76 77 7.636259 TTCATTTTGTGATTTGATTTCGTCC 57.364 32.000 0.00 0.00 36.54 4.79
77 78 6.743110 TCATTTTGTGATTTGATTTCGTCCA 58.257 32.000 0.00 0.00 0.00 4.02
78 79 6.640499 TCATTTTGTGATTTGATTTCGTCCAC 59.360 34.615 0.00 0.00 0.00 4.02
79 80 5.506686 TTTGTGATTTGATTTCGTCCACA 57.493 34.783 0.00 0.00 0.00 4.17
80 81 4.747540 TGTGATTTGATTTCGTCCACAG 57.252 40.909 0.00 0.00 0.00 3.66
81 82 3.501828 TGTGATTTGATTTCGTCCACAGG 59.498 43.478 0.00 0.00 0.00 4.00
82 83 3.502211 GTGATTTGATTTCGTCCACAGGT 59.498 43.478 0.00 0.00 0.00 4.00
83 84 3.751175 TGATTTGATTTCGTCCACAGGTC 59.249 43.478 0.00 0.00 0.00 3.85
84 85 2.920724 TTGATTTCGTCCACAGGTCA 57.079 45.000 0.00 0.00 0.00 4.02
85 86 2.920724 TGATTTCGTCCACAGGTCAA 57.079 45.000 0.00 0.00 0.00 3.18
86 87 3.201353 TGATTTCGTCCACAGGTCAAA 57.799 42.857 0.00 0.00 0.00 2.69
87 88 3.750371 TGATTTCGTCCACAGGTCAAAT 58.250 40.909 0.00 0.00 0.00 2.32
88 89 4.141287 TGATTTCGTCCACAGGTCAAATT 58.859 39.130 0.00 0.00 0.00 1.82
89 90 4.582656 TGATTTCGTCCACAGGTCAAATTT 59.417 37.500 0.00 0.00 0.00 1.82
90 91 3.980646 TTCGTCCACAGGTCAAATTTG 57.019 42.857 12.15 12.15 0.00 2.32
91 92 2.925724 TCGTCCACAGGTCAAATTTGT 58.074 42.857 17.47 0.00 0.00 2.83
92 93 3.283751 TCGTCCACAGGTCAAATTTGTT 58.716 40.909 17.47 2.85 0.00 2.83
93 94 4.452825 TCGTCCACAGGTCAAATTTGTTA 58.547 39.130 17.47 0.00 0.00 2.41
94 95 4.882427 TCGTCCACAGGTCAAATTTGTTAA 59.118 37.500 17.47 0.00 0.00 2.01
95 96 5.357314 TCGTCCACAGGTCAAATTTGTTAAA 59.643 36.000 17.47 0.00 0.00 1.52
96 97 6.039941 TCGTCCACAGGTCAAATTTGTTAAAT 59.960 34.615 17.47 0.27 0.00 1.40
97 98 6.699642 CGTCCACAGGTCAAATTTGTTAAATT 59.300 34.615 17.47 0.00 42.62 1.82
107 108 5.590104 AATTTGTTAAATTTGCCGTGAGC 57.410 34.783 0.00 0.00 37.84 4.26
116 117 3.987404 GCCGTGAGCAACCAAGAT 58.013 55.556 0.00 0.00 42.97 2.40
117 118 2.257353 GCCGTGAGCAACCAAGATT 58.743 52.632 0.00 0.00 42.97 2.40
118 119 0.598065 GCCGTGAGCAACCAAGATTT 59.402 50.000 0.00 0.00 42.97 2.17
119 120 1.000274 GCCGTGAGCAACCAAGATTTT 60.000 47.619 0.00 0.00 42.97 1.82
120 121 2.664916 CCGTGAGCAACCAAGATTTTG 58.335 47.619 0.00 0.00 0.00 2.44
129 130 5.871539 GCAACCAAGATTTTGCCAATAATG 58.128 37.500 0.00 0.00 41.95 1.90
130 131 5.642919 GCAACCAAGATTTTGCCAATAATGA 59.357 36.000 0.00 0.00 41.95 2.57
131 132 6.402442 GCAACCAAGATTTTGCCAATAATGAC 60.402 38.462 0.00 0.00 41.95 3.06
132 133 6.357579 ACCAAGATTTTGCCAATAATGACA 57.642 33.333 0.00 0.00 32.79 3.58
133 134 6.767456 ACCAAGATTTTGCCAATAATGACAA 58.233 32.000 0.00 0.00 32.79 3.18
134 135 7.396418 ACCAAGATTTTGCCAATAATGACAAT 58.604 30.769 0.00 0.00 28.60 2.71
135 136 7.884354 ACCAAGATTTTGCCAATAATGACAATT 59.116 29.630 0.00 0.00 28.60 2.32
136 137 8.392612 CCAAGATTTTGCCAATAATGACAATTC 58.607 33.333 0.00 0.00 28.60 2.17
137 138 8.392612 CAAGATTTTGCCAATAATGACAATTCC 58.607 33.333 0.00 0.00 28.60 3.01
138 139 7.049754 AGATTTTGCCAATAATGACAATTCCC 58.950 34.615 0.00 0.00 28.60 3.97
139 140 5.752036 TTTGCCAATAATGACAATTCCCA 57.248 34.783 0.00 0.00 28.60 4.37
140 141 5.752036 TTGCCAATAATGACAATTCCCAA 57.248 34.783 0.00 0.00 0.00 4.12
141 142 5.341872 TGCCAATAATGACAATTCCCAAG 57.658 39.130 0.00 0.00 0.00 3.61
142 143 4.776837 TGCCAATAATGACAATTCCCAAGT 59.223 37.500 0.00 0.00 0.00 3.16
143 144 5.111293 GCCAATAATGACAATTCCCAAGTG 58.889 41.667 0.00 0.00 0.00 3.16
144 145 5.105392 GCCAATAATGACAATTCCCAAGTGA 60.105 40.000 0.00 0.00 0.00 3.41
145 146 6.332630 CCAATAATGACAATTCCCAAGTGAC 58.667 40.000 0.00 0.00 0.00 3.67
146 147 6.071447 CCAATAATGACAATTCCCAAGTGACA 60.071 38.462 0.00 0.00 35.86 3.58
147 148 7.377398 CAATAATGACAATTCCCAAGTGACAA 58.623 34.615 0.00 0.00 35.17 3.18
148 149 5.458041 AATGACAATTCCCAAGTGACAAG 57.542 39.130 0.00 0.00 35.17 3.16
149 150 4.163441 TGACAATTCCCAAGTGACAAGA 57.837 40.909 0.00 0.00 29.27 3.02
150 151 4.136796 TGACAATTCCCAAGTGACAAGAG 58.863 43.478 0.00 0.00 29.27 2.85
151 152 3.490348 ACAATTCCCAAGTGACAAGAGG 58.510 45.455 0.00 0.00 0.00 3.69
152 153 3.117512 ACAATTCCCAAGTGACAAGAGGT 60.118 43.478 0.00 0.00 0.00 3.85
153 154 2.638480 TTCCCAAGTGACAAGAGGTG 57.362 50.000 0.00 0.00 0.00 4.00
154 155 1.801242 TCCCAAGTGACAAGAGGTGA 58.199 50.000 0.00 0.00 0.00 4.02
155 156 1.416401 TCCCAAGTGACAAGAGGTGAC 59.584 52.381 0.00 0.00 33.34 3.67
156 157 1.140852 CCCAAGTGACAAGAGGTGACA 59.859 52.381 0.00 0.00 35.91 3.58
157 158 2.421388 CCCAAGTGACAAGAGGTGACAA 60.421 50.000 0.00 0.00 35.91 3.18
158 159 2.874701 CCAAGTGACAAGAGGTGACAAG 59.125 50.000 0.00 0.00 35.91 3.16
159 160 3.432186 CCAAGTGACAAGAGGTGACAAGA 60.432 47.826 0.00 0.00 35.91 3.02
160 161 4.384056 CAAGTGACAAGAGGTGACAAGAT 58.616 43.478 0.00 0.00 35.91 2.40
161 162 4.000331 AGTGACAAGAGGTGACAAGATG 58.000 45.455 0.00 0.00 35.91 2.90
162 163 3.389329 AGTGACAAGAGGTGACAAGATGT 59.611 43.478 0.00 0.00 35.91 3.06
163 164 3.496130 GTGACAAGAGGTGACAAGATGTG 59.504 47.826 0.00 0.00 33.39 3.21
164 165 3.387699 TGACAAGAGGTGACAAGATGTGA 59.612 43.478 0.00 0.00 0.00 3.58
165 166 4.141733 TGACAAGAGGTGACAAGATGTGAA 60.142 41.667 0.00 0.00 0.00 3.18
166 167 4.130118 ACAAGAGGTGACAAGATGTGAAC 58.870 43.478 0.00 0.00 0.00 3.18
167 168 4.129380 CAAGAGGTGACAAGATGTGAACA 58.871 43.478 0.00 0.00 0.00 3.18
168 169 4.000331 AGAGGTGACAAGATGTGAACAG 58.000 45.455 0.00 0.00 0.00 3.16
169 170 3.389329 AGAGGTGACAAGATGTGAACAGT 59.611 43.478 0.00 0.00 0.00 3.55
170 171 3.470709 AGGTGACAAGATGTGAACAGTG 58.529 45.455 0.00 0.00 0.00 3.66
171 172 3.118261 AGGTGACAAGATGTGAACAGTGT 60.118 43.478 0.00 0.00 0.00 3.55
172 173 3.248602 GGTGACAAGATGTGAACAGTGTC 59.751 47.826 13.65 13.65 36.98 3.67
173 174 3.248602 GTGACAAGATGTGAACAGTGTCC 59.751 47.826 16.10 0.00 36.27 4.02
174 175 3.118445 TGACAAGATGTGAACAGTGTCCA 60.118 43.478 16.10 0.00 36.27 4.02
175 176 3.470709 ACAAGATGTGAACAGTGTCCAG 58.529 45.455 0.00 0.00 0.00 3.86
176 177 3.118261 ACAAGATGTGAACAGTGTCCAGT 60.118 43.478 0.00 0.00 0.00 4.00
177 178 4.100963 ACAAGATGTGAACAGTGTCCAGTA 59.899 41.667 0.00 0.00 0.00 2.74
178 179 4.527509 AGATGTGAACAGTGTCCAGTAG 57.472 45.455 0.00 0.00 0.00 2.57
179 180 3.259374 AGATGTGAACAGTGTCCAGTAGG 59.741 47.826 0.00 0.00 0.00 3.18
180 181 2.673258 TGTGAACAGTGTCCAGTAGGA 58.327 47.619 0.00 0.00 43.21 2.94
181 182 2.628178 TGTGAACAGTGTCCAGTAGGAG 59.372 50.000 0.00 0.00 46.92 3.69
182 183 2.628657 GTGAACAGTGTCCAGTAGGAGT 59.371 50.000 0.00 0.00 46.92 3.85
183 184 3.825014 GTGAACAGTGTCCAGTAGGAGTA 59.175 47.826 0.00 0.00 46.92 2.59
184 185 3.825014 TGAACAGTGTCCAGTAGGAGTAC 59.175 47.826 0.00 0.00 46.92 2.73
185 186 2.805194 ACAGTGTCCAGTAGGAGTACC 58.195 52.381 0.00 0.00 46.92 3.34
186 187 1.743958 CAGTGTCCAGTAGGAGTACCG 59.256 57.143 0.00 0.00 46.92 4.02
187 188 0.455005 GTGTCCAGTAGGAGTACCGC 59.545 60.000 0.00 0.00 46.92 5.68
188 189 0.682209 TGTCCAGTAGGAGTACCGCC 60.682 60.000 0.00 0.00 46.92 6.13
189 190 1.076485 TCCAGTAGGAGTACCGCCC 60.076 63.158 0.00 0.00 39.61 6.13
190 191 2.132352 CCAGTAGGAGTACCGCCCC 61.132 68.421 0.00 0.00 41.83 5.80
191 192 2.132352 CAGTAGGAGTACCGCCCCC 61.132 68.421 0.00 0.00 41.83 5.40
192 193 2.042639 GTAGGAGTACCGCCCCCA 60.043 66.667 0.00 0.00 41.83 4.96
193 194 1.458967 GTAGGAGTACCGCCCCCAT 60.459 63.158 0.00 0.00 41.83 4.00
194 195 1.152398 TAGGAGTACCGCCCCCATC 60.152 63.158 0.00 0.00 41.83 3.51
195 196 1.951923 TAGGAGTACCGCCCCCATCA 61.952 60.000 0.00 0.00 41.83 3.07
196 197 2.504519 GAGTACCGCCCCCATCAC 59.495 66.667 0.00 0.00 0.00 3.06
197 198 2.285069 AGTACCGCCCCCATCACA 60.285 61.111 0.00 0.00 0.00 3.58
198 199 1.692749 AGTACCGCCCCCATCACAT 60.693 57.895 0.00 0.00 0.00 3.21
199 200 1.226262 GTACCGCCCCCATCACATT 59.774 57.895 0.00 0.00 0.00 2.71
200 201 1.101049 GTACCGCCCCCATCACATTG 61.101 60.000 0.00 0.00 0.00 2.82
201 202 2.277672 TACCGCCCCCATCACATTGG 62.278 60.000 0.00 0.00 36.46 3.16
202 203 3.530260 CGCCCCCATCACATTGGC 61.530 66.667 0.00 0.00 38.74 4.52
203 204 2.364056 GCCCCCATCACATTGGCA 60.364 61.111 0.00 0.00 41.76 4.92
204 205 1.763256 GCCCCCATCACATTGGCAT 60.763 57.895 0.00 0.00 41.76 4.40
205 206 2.035237 GCCCCCATCACATTGGCATG 62.035 60.000 0.00 0.00 41.76 4.06
206 207 1.444250 CCCCATCACATTGGCATGC 59.556 57.895 9.90 9.90 35.29 4.06
207 208 1.444250 CCCATCACATTGGCATGCC 59.556 57.895 30.54 30.54 35.29 4.40
208 209 1.331399 CCCATCACATTGGCATGCCA 61.331 55.000 35.59 35.59 45.63 4.92
209 210 0.756294 CCATCACATTGGCATGCCAT 59.244 50.000 38.78 25.05 46.64 4.40
210 211 1.540146 CCATCACATTGGCATGCCATG 60.540 52.381 38.78 33.99 46.64 3.66
211 212 1.138069 CATCACATTGGCATGCCATGT 59.862 47.619 38.78 34.58 46.64 3.21
212 213 0.533032 TCACATTGGCATGCCATGTG 59.467 50.000 40.92 40.92 46.64 3.21
213 214 0.248012 CACATTGGCATGCCATGTGT 59.752 50.000 39.71 37.58 46.64 3.72
214 215 1.477295 CACATTGGCATGCCATGTGTA 59.523 47.619 39.71 29.85 46.64 2.90
215 216 2.101750 CACATTGGCATGCCATGTGTAT 59.898 45.455 39.71 30.43 46.64 2.29
216 217 3.318557 CACATTGGCATGCCATGTGTATA 59.681 43.478 39.71 28.78 46.64 1.47
217 218 4.021807 CACATTGGCATGCCATGTGTATAT 60.022 41.667 39.71 29.40 46.64 0.86
218 219 4.021807 ACATTGGCATGCCATGTGTATATG 60.022 41.667 37.27 33.91 46.64 1.78
219 220 3.505480 TGGCATGCCATGTGTATATGA 57.495 42.857 35.59 8.22 41.89 2.15
220 221 3.830121 TGGCATGCCATGTGTATATGAA 58.170 40.909 35.59 7.99 41.89 2.57
221 222 3.569277 TGGCATGCCATGTGTATATGAAC 59.431 43.478 35.59 3.80 41.89 3.18
222 223 3.569277 GGCATGCCATGTGTATATGAACA 59.431 43.478 32.08 0.00 35.81 3.18
223 224 4.037803 GGCATGCCATGTGTATATGAACAA 59.962 41.667 32.08 0.00 35.81 2.83
224 225 4.977963 GCATGCCATGTGTATATGAACAAC 59.022 41.667 6.36 0.00 0.00 3.32
225 226 5.450274 GCATGCCATGTGTATATGAACAACA 60.450 40.000 6.36 0.00 0.00 3.33
226 227 6.562518 CATGCCATGTGTATATGAACAACAA 58.437 36.000 0.00 0.00 0.00 2.83
227 228 6.193514 TGCCATGTGTATATGAACAACAAG 57.806 37.500 0.00 0.00 0.00 3.16
228 229 5.942826 TGCCATGTGTATATGAACAACAAGA 59.057 36.000 0.00 0.00 0.00 3.02
229 230 6.128035 TGCCATGTGTATATGAACAACAAGAC 60.128 38.462 0.00 0.00 0.00 3.01
230 231 6.128035 GCCATGTGTATATGAACAACAAGACA 60.128 38.462 0.00 0.00 0.00 3.41
231 232 7.574779 GCCATGTGTATATGAACAACAAGACAA 60.575 37.037 0.00 0.00 0.00 3.18
232 233 7.964559 CCATGTGTATATGAACAACAAGACAAG 59.035 37.037 0.00 0.00 0.00 3.16
233 234 8.506437 CATGTGTATATGAACAACAAGACAAGT 58.494 33.333 0.00 0.00 0.00 3.16
234 235 8.445275 TGTGTATATGAACAACAAGACAAGTT 57.555 30.769 0.00 0.00 0.00 2.66
235 236 9.549078 TGTGTATATGAACAACAAGACAAGTTA 57.451 29.630 0.00 0.00 0.00 2.24
237 238 9.990360 TGTATATGAACAACAAGACAAGTTAGA 57.010 29.630 0.00 0.00 0.00 2.10
240 241 9.725019 ATATGAACAACAAGACAAGTTAGATGA 57.275 29.630 0.00 0.00 0.00 2.92
241 242 7.246674 TGAACAACAAGACAAGTTAGATGAC 57.753 36.000 0.00 0.00 0.00 3.06
242 243 6.260050 TGAACAACAAGACAAGTTAGATGACC 59.740 38.462 0.00 0.00 0.00 4.02
243 244 5.680619 ACAACAAGACAAGTTAGATGACCA 58.319 37.500 0.00 0.00 0.00 4.02
244 245 5.760253 ACAACAAGACAAGTTAGATGACCAG 59.240 40.000 0.00 0.00 0.00 4.00
245 246 5.808366 ACAAGACAAGTTAGATGACCAGA 57.192 39.130 0.00 0.00 0.00 3.86
246 247 6.174720 ACAAGACAAGTTAGATGACCAGAA 57.825 37.500 0.00 0.00 0.00 3.02
247 248 6.591935 ACAAGACAAGTTAGATGACCAGAAA 58.408 36.000 0.00 0.00 0.00 2.52
248 249 6.483640 ACAAGACAAGTTAGATGACCAGAAAC 59.516 38.462 0.00 0.00 0.00 2.78
249 250 6.174720 AGACAAGTTAGATGACCAGAAACA 57.825 37.500 0.00 0.00 0.00 2.83
250 251 5.992217 AGACAAGTTAGATGACCAGAAACAC 59.008 40.000 0.00 0.00 0.00 3.32
251 252 4.750098 ACAAGTTAGATGACCAGAAACACG 59.250 41.667 0.00 0.00 0.00 4.49
252 253 3.926616 AGTTAGATGACCAGAAACACGG 58.073 45.455 0.00 0.00 0.00 4.94
253 254 3.576982 AGTTAGATGACCAGAAACACGGA 59.423 43.478 0.00 0.00 0.00 4.69
254 255 4.223032 AGTTAGATGACCAGAAACACGGAT 59.777 41.667 0.00 0.00 0.00 4.18
255 256 3.703001 AGATGACCAGAAACACGGATT 57.297 42.857 0.00 0.00 0.00 3.01
256 257 4.021102 AGATGACCAGAAACACGGATTT 57.979 40.909 0.00 0.00 0.00 2.17
257 258 4.398319 AGATGACCAGAAACACGGATTTT 58.602 39.130 0.00 0.00 0.00 1.82
258 259 5.556915 AGATGACCAGAAACACGGATTTTA 58.443 37.500 0.00 0.00 0.00 1.52
259 260 5.411669 AGATGACCAGAAACACGGATTTTAC 59.588 40.000 0.00 0.00 0.00 2.01
260 261 4.452825 TGACCAGAAACACGGATTTTACA 58.547 39.130 0.00 0.00 0.00 2.41
261 262 4.882427 TGACCAGAAACACGGATTTTACAA 59.118 37.500 0.00 0.00 0.00 2.41
262 263 5.008217 TGACCAGAAACACGGATTTTACAAG 59.992 40.000 0.00 0.00 0.00 3.16
263 264 4.885325 ACCAGAAACACGGATTTTACAAGT 59.115 37.500 0.00 0.00 0.00 3.16
264 265 5.358725 ACCAGAAACACGGATTTTACAAGTT 59.641 36.000 0.00 0.00 0.00 2.66
265 266 6.127563 ACCAGAAACACGGATTTTACAAGTTT 60.128 34.615 0.00 0.00 0.00 2.66
266 267 7.067251 ACCAGAAACACGGATTTTACAAGTTTA 59.933 33.333 0.00 0.00 0.00 2.01
267 268 8.079809 CCAGAAACACGGATTTTACAAGTTTAT 58.920 33.333 0.00 0.00 0.00 1.40
268 269 8.901748 CAGAAACACGGATTTTACAAGTTTATG 58.098 33.333 0.00 0.00 32.73 1.90
269 270 7.593644 AGAAACACGGATTTTACAAGTTTATGC 59.406 33.333 0.00 0.00 0.00 3.14
270 271 6.320494 ACACGGATTTTACAAGTTTATGCA 57.680 33.333 0.00 0.00 0.00 3.96
271 272 6.919721 ACACGGATTTTACAAGTTTATGCAT 58.080 32.000 3.79 3.79 0.00 3.96
272 273 7.027161 ACACGGATTTTACAAGTTTATGCATC 58.973 34.615 0.19 0.00 0.00 3.91
273 274 7.026562 CACGGATTTTACAAGTTTATGCATCA 58.973 34.615 0.19 0.00 0.00 3.07
274 275 7.540400 CACGGATTTTACAAGTTTATGCATCAA 59.460 33.333 0.19 0.00 0.00 2.57
275 276 8.085296 ACGGATTTTACAAGTTTATGCATCAAA 58.915 29.630 0.19 0.00 0.00 2.69
276 277 8.372521 CGGATTTTACAAGTTTATGCATCAAAC 58.627 33.333 0.19 12.30 36.37 2.93
277 278 9.423061 GGATTTTACAAGTTTATGCATCAAACT 57.577 29.630 19.75 19.75 45.73 2.66
281 282 9.685828 TTTACAAGTTTATGCATCAAACTAACC 57.314 29.630 22.98 0.90 43.62 2.85
282 283 6.378582 ACAAGTTTATGCATCAAACTAACCG 58.621 36.000 22.98 17.16 43.62 4.44
283 284 6.016610 ACAAGTTTATGCATCAAACTAACCGT 60.017 34.615 22.98 17.54 43.62 4.83
284 285 6.178239 AGTTTATGCATCAAACTAACCGTC 57.822 37.500 22.11 0.32 42.83 4.79
285 286 4.850859 TTATGCATCAAACTAACCGTCG 57.149 40.909 0.19 0.00 0.00 5.12
286 287 0.793861 TGCATCAAACTAACCGTCGC 59.206 50.000 0.00 0.00 0.00 5.19
287 288 0.247145 GCATCAAACTAACCGTCGCG 60.247 55.000 0.00 0.00 0.00 5.87
288 289 1.065358 CATCAAACTAACCGTCGCGT 58.935 50.000 5.77 0.00 0.00 6.01
289 290 1.065358 ATCAAACTAACCGTCGCGTG 58.935 50.000 5.77 0.00 0.00 5.34
290 291 1.154727 CAAACTAACCGTCGCGTGC 60.155 57.895 5.77 0.00 0.00 5.34
291 292 1.592131 AAACTAACCGTCGCGTGCA 60.592 52.632 5.77 0.00 0.00 4.57
292 293 1.152989 AAACTAACCGTCGCGTGCAA 61.153 50.000 5.77 0.00 0.00 4.08
293 294 1.554042 AACTAACCGTCGCGTGCAAG 61.554 55.000 5.77 0.00 0.00 4.01
294 295 2.019951 CTAACCGTCGCGTGCAAGT 61.020 57.895 5.77 0.00 0.00 3.16
295 296 1.554042 CTAACCGTCGCGTGCAAGTT 61.554 55.000 5.77 9.51 0.00 2.66
296 297 1.550659 TAACCGTCGCGTGCAAGTTC 61.551 55.000 5.77 0.00 0.00 3.01
297 298 3.036084 CCGTCGCGTGCAAGTTCT 61.036 61.111 5.77 0.00 0.00 3.01
298 299 2.594962 CCGTCGCGTGCAAGTTCTT 61.595 57.895 5.77 0.00 0.00 2.52
299 300 1.279527 CCGTCGCGTGCAAGTTCTTA 61.280 55.000 5.77 0.00 0.00 2.10
300 301 0.091344 CGTCGCGTGCAAGTTCTTAG 59.909 55.000 5.77 0.00 0.00 2.18
301 302 1.415374 GTCGCGTGCAAGTTCTTAGA 58.585 50.000 5.77 0.00 0.00 2.10
302 303 1.124477 GTCGCGTGCAAGTTCTTAGAC 59.876 52.381 5.77 0.00 0.00 2.59
303 304 1.000607 TCGCGTGCAAGTTCTTAGACT 60.001 47.619 5.77 0.00 0.00 3.24
304 305 1.387084 CGCGTGCAAGTTCTTAGACTC 59.613 52.381 0.00 0.00 0.00 3.36
305 306 1.727335 GCGTGCAAGTTCTTAGACTCC 59.273 52.381 0.59 0.00 0.00 3.85
306 307 1.986378 CGTGCAAGTTCTTAGACTCCG 59.014 52.381 0.00 0.00 0.00 4.63
307 308 2.338500 GTGCAAGTTCTTAGACTCCGG 58.662 52.381 0.00 0.00 0.00 5.14
308 309 1.275291 TGCAAGTTCTTAGACTCCGGG 59.725 52.381 0.00 0.00 0.00 5.73
309 310 1.275573 GCAAGTTCTTAGACTCCGGGT 59.724 52.381 0.00 0.00 0.00 5.28
310 311 2.931320 GCAAGTTCTTAGACTCCGGGTG 60.931 54.545 0.00 0.00 0.00 4.61
311 312 2.299297 CAAGTTCTTAGACTCCGGGTGT 59.701 50.000 0.00 0.50 0.00 4.16
312 313 3.446442 AGTTCTTAGACTCCGGGTGTA 57.554 47.619 0.00 0.00 0.00 2.90
313 314 3.978610 AGTTCTTAGACTCCGGGTGTAT 58.021 45.455 0.00 1.38 0.00 2.29
314 315 4.351127 AGTTCTTAGACTCCGGGTGTATT 58.649 43.478 0.00 0.00 0.00 1.89
315 316 4.776308 AGTTCTTAGACTCCGGGTGTATTT 59.224 41.667 0.00 0.00 0.00 1.40
316 317 5.954150 AGTTCTTAGACTCCGGGTGTATTTA 59.046 40.000 0.00 0.00 0.00 1.40
317 318 5.841957 TCTTAGACTCCGGGTGTATTTAC 57.158 43.478 0.00 0.00 0.00 2.01
318 319 4.646492 TCTTAGACTCCGGGTGTATTTACC 59.354 45.833 0.00 0.00 40.10 2.85
319 320 3.111741 AGACTCCGGGTGTATTTACCT 57.888 47.619 0.00 0.00 40.66 3.08
320 321 3.029570 AGACTCCGGGTGTATTTACCTC 58.970 50.000 0.00 0.00 40.66 3.85
321 322 2.102084 GACTCCGGGTGTATTTACCTCC 59.898 54.545 0.00 0.00 40.66 4.30
322 323 2.292719 ACTCCGGGTGTATTTACCTCCT 60.293 50.000 0.00 0.00 40.66 3.69
323 324 2.770232 CTCCGGGTGTATTTACCTCCTT 59.230 50.000 0.00 0.00 40.66 3.36
324 325 2.502538 TCCGGGTGTATTTACCTCCTTG 59.497 50.000 0.00 0.00 40.66 3.61
325 326 2.502538 CCGGGTGTATTTACCTCCTTGA 59.497 50.000 0.00 0.00 40.66 3.02
326 327 3.054948 CCGGGTGTATTTACCTCCTTGAA 60.055 47.826 0.00 0.00 40.66 2.69
338 339 3.134804 ACCTCCTTGAAGAATGGATACGG 59.865 47.826 0.00 0.00 42.51 4.02
349 350 0.968901 TGGATACGGGTCGAGCAACT 60.969 55.000 17.59 0.00 42.51 3.16
377 378 6.371595 TTTTGCCAATAATGACAATTCCCT 57.628 33.333 0.00 0.00 28.60 4.20
441 442 1.490490 ACCGGCCACATCAATCTGTAT 59.510 47.619 0.00 0.00 0.00 2.29
479 480 0.766131 TTACCGGTGCAAAAGGAGGA 59.234 50.000 19.93 0.00 0.00 3.71
505 506 2.978156 TTGGCCACTTTCCTTCATCT 57.022 45.000 3.88 0.00 0.00 2.90
578 579 1.931172 GCATTTGCACCTCATGAATGC 59.069 47.619 19.96 19.96 39.95 3.56
616 617 0.251033 GGCATCATCAGCAGGCCATA 60.251 55.000 5.01 0.00 44.01 2.74
617 618 1.616187 GGCATCATCAGCAGGCCATAT 60.616 52.381 5.01 0.00 44.01 1.78
618 619 2.356432 GGCATCATCAGCAGGCCATATA 60.356 50.000 5.01 0.00 44.01 0.86
619 620 3.552875 GCATCATCAGCAGGCCATATAT 58.447 45.455 5.01 0.00 0.00 0.86
707 711 1.489560 AAGGGGACGGCTGCTACTTT 61.490 55.000 0.00 0.00 0.00 2.66
776 780 3.901844 GGTAGGTATCACTATTCAGCCCA 59.098 47.826 0.00 0.00 0.00 5.36
778 782 4.899352 AGGTATCACTATTCAGCCCATC 57.101 45.455 0.00 0.00 0.00 3.51
866 871 4.044308 TCCTTGGCATAAACTCCATCCTA 58.956 43.478 0.00 0.00 31.54 2.94
867 872 4.665009 TCCTTGGCATAAACTCCATCCTAT 59.335 41.667 0.00 0.00 31.54 2.57
950 956 6.220930 TGAACTAGTACTTTTGTGCACTAGG 58.779 40.000 19.41 9.10 42.02 3.02
1026 1032 2.160417 CCTGCTTCGACAATGGAGTTTC 59.840 50.000 0.00 0.00 0.00 2.78
1167 1173 3.184986 TCGCACAAAGCATCATATCATCG 59.815 43.478 0.00 0.00 46.13 3.84
1280 1286 2.357881 GCTTTTGGCCTGCCTTGC 60.358 61.111 9.97 4.84 36.94 4.01
1464 1476 2.717485 GCACGGCGCATCATCATT 59.283 55.556 10.83 0.00 41.79 2.57
1602 1614 0.178926 TCACGGTGGGGAGAAGGTAA 60.179 55.000 8.50 0.00 0.00 2.85
1616 1628 2.170012 AGGTAATGAAGGGCGAGGTA 57.830 50.000 0.00 0.00 0.00 3.08
1865 1882 4.647611 TGCTAATTTCCCTTTTCGTCTGA 58.352 39.130 0.00 0.00 0.00 3.27
1873 1891 3.500680 TCCCTTTTCGTCTGAAATTTCCG 59.499 43.478 15.48 11.62 43.32 4.30
1876 1894 4.464112 CTTTTCGTCTGAAATTTCCGTCC 58.536 43.478 15.48 4.33 43.32 4.79
1921 1939 1.068333 CCCATTTCTTCGCAAGTGGTG 60.068 52.381 0.00 0.00 32.47 4.17
1930 1948 2.031919 CAAGTGGTGCGGTGCCTA 59.968 61.111 0.00 0.00 0.00 3.93
1931 1949 2.034879 CAAGTGGTGCGGTGCCTAG 61.035 63.158 0.00 0.00 0.00 3.02
1933 1951 1.189524 AAGTGGTGCGGTGCCTAGTA 61.190 55.000 0.00 0.00 0.00 1.82
1966 1998 3.740321 TCCAGCATTTGAATTTGCGAAAC 59.260 39.130 0.00 0.00 43.61 2.78
1967 1999 3.120580 CCAGCATTTGAATTTGCGAAACC 60.121 43.478 0.00 0.00 43.61 3.27
1968 2000 2.730928 AGCATTTGAATTTGCGAAACCG 59.269 40.909 0.00 0.00 43.61 4.44
1969 2001 2.159854 GCATTTGAATTTGCGAAACCGG 60.160 45.455 0.00 0.00 0.00 5.28
1970 2002 2.873133 TTTGAATTTGCGAAACCGGT 57.127 40.000 0.00 0.00 0.00 5.28
1971 2003 2.126914 TTGAATTTGCGAAACCGGTG 57.873 45.000 8.52 0.00 0.00 4.94
1972 2004 1.309950 TGAATTTGCGAAACCGGTGA 58.690 45.000 8.52 0.00 0.00 4.02
1976 2008 1.309950 TTTGCGAAACCGGTGATTGA 58.690 45.000 8.52 0.00 0.00 2.57
1978 2010 1.529226 TGCGAAACCGGTGATTGATT 58.471 45.000 8.52 0.00 0.00 2.57
1981 2013 3.692101 TGCGAAACCGGTGATTGATTATT 59.308 39.130 8.52 0.00 0.00 1.40
2027 2059 1.329906 GATTGAAGTGGAGATGCTGCG 59.670 52.381 0.00 0.00 0.00 5.18
2081 2113 1.681166 GCACATTGAGCTGGATGAGGT 60.681 52.381 11.73 0.00 34.09 3.85
2149 2181 0.396695 AAGGCTCATGGCAATGGAGG 60.397 55.000 0.00 0.00 44.01 4.30
2156 2188 1.965643 CATGGCAATGGAGGGGTAATG 59.034 52.381 0.00 0.00 0.00 1.90
2157 2189 1.303898 TGGCAATGGAGGGGTAATGA 58.696 50.000 0.00 0.00 0.00 2.57
2158 2190 1.215173 TGGCAATGGAGGGGTAATGAG 59.785 52.381 0.00 0.00 0.00 2.90
2159 2191 1.494721 GGCAATGGAGGGGTAATGAGA 59.505 52.381 0.00 0.00 0.00 3.27
2160 2192 2.091885 GGCAATGGAGGGGTAATGAGAA 60.092 50.000 0.00 0.00 0.00 2.87
2161 2193 3.217626 GCAATGGAGGGGTAATGAGAAG 58.782 50.000 0.00 0.00 0.00 2.85
2162 2194 3.217626 CAATGGAGGGGTAATGAGAAGC 58.782 50.000 0.00 0.00 0.00 3.86
2163 2195 1.965414 TGGAGGGGTAATGAGAAGCA 58.035 50.000 0.00 0.00 0.00 3.91
2164 2196 2.492025 TGGAGGGGTAATGAGAAGCAT 58.508 47.619 0.00 0.00 39.43 3.79
2165 2197 2.439507 TGGAGGGGTAATGAGAAGCATC 59.560 50.000 0.00 0.00 35.78 3.91
2166 2198 2.439507 GGAGGGGTAATGAGAAGCATCA 59.560 50.000 0.00 0.00 35.78 3.07
2167 2199 3.117888 GGAGGGGTAATGAGAAGCATCAA 60.118 47.826 0.00 0.00 35.78 2.57
2168 2200 4.133078 GAGGGGTAATGAGAAGCATCAAG 58.867 47.826 0.00 0.00 35.78 3.02
2169 2201 3.117738 AGGGGTAATGAGAAGCATCAAGG 60.118 47.826 0.00 0.00 35.78 3.61
2170 2202 3.217626 GGGTAATGAGAAGCATCAAGGG 58.782 50.000 0.00 0.00 35.78 3.95
2171 2203 3.372025 GGGTAATGAGAAGCATCAAGGGT 60.372 47.826 0.00 0.00 35.78 4.34
2180 2212 3.726557 AGCATCAAGGGTTCAAGATGA 57.273 42.857 0.00 0.00 40.10 2.92
2203 2235 5.796424 ATATGCTTGTTCCATGGGAATTC 57.204 39.130 13.02 0.00 44.04 2.17
2209 2241 2.562298 TGTTCCATGGGAATTCTGTTGC 59.438 45.455 13.02 0.00 44.04 4.17
2267 2299 2.686915 GCAGTTCTGATCAGGGGAATTG 59.313 50.000 22.42 16.23 32.44 2.32
2268 2300 3.285484 CAGTTCTGATCAGGGGAATTGG 58.715 50.000 22.42 1.50 0.00 3.16
2292 2326 5.084818 TGATCAAATGTGTCATCCGTAGT 57.915 39.130 0.00 0.00 0.00 2.73
2310 2344 4.558898 CGTAGTGTAGTCTGACCAGCTTTT 60.559 45.833 3.76 0.00 0.00 2.27
2519 3278 3.321497 TGTTGTGCCAACAAAAGTGTTC 58.679 40.909 15.57 0.00 45.00 3.18
2561 3320 1.820519 GTCACCGGTACACATACTCCA 59.179 52.381 6.87 0.00 0.00 3.86
2649 3435 4.507710 CCATCGAAAGGTCTTCATGAAGA 58.492 43.478 30.05 30.05 44.47 2.87
2693 3483 2.443958 TGATCACCCACAACAAACCA 57.556 45.000 0.00 0.00 0.00 3.67
2708 3499 3.008485 ACAAACCAACCCAGCAAGAAAAA 59.992 39.130 0.00 0.00 0.00 1.94
2713 3504 5.390387 ACCAACCCAGCAAGAAAAAGTATA 58.610 37.500 0.00 0.00 0.00 1.47
2716 3507 3.439129 ACCCAGCAAGAAAAAGTATACGC 59.561 43.478 0.00 0.00 0.00 4.42
2747 3538 1.991121 ACTCAACCCTGACGAGTACA 58.009 50.000 0.00 0.00 38.22 2.90
2779 3570 2.678190 GCTTTCATAGAAGTGGCGGTCT 60.678 50.000 0.00 0.00 0.00 3.85
2853 3645 8.352942 ACATTTCTAGTTGTTTTGGAAGATGAC 58.647 33.333 0.00 0.00 0.00 3.06
2873 3665 1.806623 CGAGGGAATTGTTAGAGCGGG 60.807 57.143 0.00 0.00 0.00 6.13
2875 3667 1.436983 GGGAATTGTTAGAGCGGGCG 61.437 60.000 0.00 0.00 0.00 6.13
2879 3671 0.743345 ATTGTTAGAGCGGGCGTTCC 60.743 55.000 0.00 0.00 0.00 3.62
2923 3715 7.880713 TCAAATATAGTGTTGAACAAGTAGGCA 59.119 33.333 0.00 0.00 30.93 4.75
2924 3716 8.511321 CAAATATAGTGTTGAACAAGTAGGCAA 58.489 33.333 0.00 0.00 0.00 4.52
2926 3718 4.900635 AGTGTTGAACAAGTAGGCAAAG 57.099 40.909 0.00 0.00 0.00 2.77
2989 3783 1.028868 GCAGAGGGATGGTTGAGCAC 61.029 60.000 0.00 0.00 0.00 4.40
2990 3784 0.617413 CAGAGGGATGGTTGAGCACT 59.383 55.000 0.00 0.00 0.00 4.40
2995 3789 1.065199 GGGATGGTTGAGCACTGATGA 60.065 52.381 0.00 0.00 0.00 2.92
3043 3837 0.179004 ATCACGGAAAAGTGGTGGCA 60.179 50.000 0.00 0.00 42.10 4.92
3092 3886 0.460311 CTATTCGAGCACCCGGTCTT 59.540 55.000 0.00 0.00 37.51 3.01
3099 3893 2.948720 GCACCCGGTCTTGAGCTCT 61.949 63.158 16.19 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.707239 TTTTGTGTGACGCCCGACAC 61.707 55.000 14.47 14.47 42.40 3.67
3 4 0.309302 CATTTTTGTGTGACGCCCGA 59.691 50.000 0.00 0.00 0.00 5.14
4 5 0.030101 ACATTTTTGTGTGACGCCCG 59.970 50.000 0.00 0.00 0.00 6.13
5 6 1.066303 TGACATTTTTGTGTGACGCCC 59.934 47.619 0.00 0.00 31.16 6.13
6 7 2.384382 CTGACATTTTTGTGTGACGCC 58.616 47.619 0.00 0.00 31.16 5.68
7 8 1.780860 GCTGACATTTTTGTGTGACGC 59.219 47.619 0.00 0.00 31.16 5.19
8 9 2.384382 GGCTGACATTTTTGTGTGACG 58.616 47.619 0.00 0.00 31.16 4.35
9 10 2.384382 CGGCTGACATTTTTGTGTGAC 58.616 47.619 0.00 0.00 31.16 3.67
10 11 1.268999 GCGGCTGACATTTTTGTGTGA 60.269 47.619 0.00 0.00 31.16 3.58
11 12 1.130955 GCGGCTGACATTTTTGTGTG 58.869 50.000 0.00 0.00 31.16 3.82
12 13 0.317770 CGCGGCTGACATTTTTGTGT 60.318 50.000 0.00 0.00 34.39 3.72
13 14 0.317770 ACGCGGCTGACATTTTTGTG 60.318 50.000 12.47 0.00 0.00 3.33
14 15 0.317770 CACGCGGCTGACATTTTTGT 60.318 50.000 12.47 0.00 0.00 2.83
15 16 0.040514 TCACGCGGCTGACATTTTTG 60.041 50.000 12.47 0.00 0.00 2.44
16 17 0.665835 TTCACGCGGCTGACATTTTT 59.334 45.000 12.47 0.00 0.00 1.94
17 18 0.665835 TTTCACGCGGCTGACATTTT 59.334 45.000 12.47 0.00 0.00 1.82
18 19 0.881118 ATTTCACGCGGCTGACATTT 59.119 45.000 12.47 0.00 0.00 2.32
19 20 1.665679 CTATTTCACGCGGCTGACATT 59.334 47.619 12.47 0.00 0.00 2.71
20 21 1.290203 CTATTTCACGCGGCTGACAT 58.710 50.000 12.47 7.33 0.00 3.06
21 22 0.037697 ACTATTTCACGCGGCTGACA 60.038 50.000 12.47 0.00 0.00 3.58
22 23 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
23 24 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
24 25 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
25 26 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
32 33 4.520874 TGAATTGCCCGTGAAACTATTTCA 59.479 37.500 0.00 0.00 46.68 2.69
33 34 5.054390 TGAATTGCCCGTGAAACTATTTC 57.946 39.130 0.00 0.00 40.08 2.17
34 35 5.659440 ATGAATTGCCCGTGAAACTATTT 57.341 34.783 0.00 0.00 31.75 1.40
35 36 5.659440 AATGAATTGCCCGTGAAACTATT 57.341 34.783 0.00 0.00 31.75 1.73
36 37 5.659440 AAATGAATTGCCCGTGAAACTAT 57.341 34.783 0.00 0.00 31.75 2.12
37 38 5.221342 ACAAAATGAATTGCCCGTGAAACTA 60.221 36.000 0.00 0.00 33.52 2.24
38 39 4.057432 CAAAATGAATTGCCCGTGAAACT 58.943 39.130 0.00 0.00 31.75 2.66
39 40 3.807071 ACAAAATGAATTGCCCGTGAAAC 59.193 39.130 0.00 0.00 33.52 2.78
40 41 3.806521 CACAAAATGAATTGCCCGTGAAA 59.193 39.130 0.00 0.00 33.52 2.69
41 42 3.068732 TCACAAAATGAATTGCCCGTGAA 59.931 39.130 0.00 0.00 33.02 3.18
42 43 2.625314 TCACAAAATGAATTGCCCGTGA 59.375 40.909 0.00 0.00 33.02 4.35
43 44 3.023946 TCACAAAATGAATTGCCCGTG 57.976 42.857 0.00 0.00 33.02 4.94
44 45 3.959535 ATCACAAAATGAATTGCCCGT 57.040 38.095 0.00 0.00 41.93 5.28
45 46 4.689812 TCAAATCACAAAATGAATTGCCCG 59.310 37.500 0.74 0.00 44.69 6.13
46 47 6.746745 ATCAAATCACAAAATGAATTGCCC 57.253 33.333 0.74 0.00 44.69 5.36
47 48 7.479291 CGAAATCAAATCACAAAATGAATTGCC 59.521 33.333 0.74 0.00 44.69 4.52
48 49 8.011106 ACGAAATCAAATCACAAAATGAATTGC 58.989 29.630 0.00 0.00 44.69 3.56
49 50 9.519905 GACGAAATCAAATCACAAAATGAATTG 57.480 29.630 0.00 0.00 45.90 2.32
50 51 8.711457 GGACGAAATCAAATCACAAAATGAATT 58.289 29.630 0.00 0.00 41.93 2.17
51 52 7.871973 TGGACGAAATCAAATCACAAAATGAAT 59.128 29.630 0.00 0.00 41.93 2.57
52 53 7.168972 GTGGACGAAATCAAATCACAAAATGAA 59.831 33.333 0.00 0.00 41.93 2.57
53 54 6.640499 GTGGACGAAATCAAATCACAAAATGA 59.360 34.615 0.00 0.00 43.13 2.57
54 55 6.420306 TGTGGACGAAATCAAATCACAAAATG 59.580 34.615 0.00 0.00 31.84 2.32
55 56 6.511416 TGTGGACGAAATCAAATCACAAAAT 58.489 32.000 0.00 0.00 31.84 1.82
56 57 5.895928 TGTGGACGAAATCAAATCACAAAA 58.104 33.333 0.00 0.00 31.84 2.44
57 58 5.506686 TGTGGACGAAATCAAATCACAAA 57.493 34.783 0.00 0.00 31.84 2.83
58 59 4.023279 CCTGTGGACGAAATCAAATCACAA 60.023 41.667 0.00 0.00 34.01 3.33
59 60 3.501828 CCTGTGGACGAAATCAAATCACA 59.498 43.478 0.00 0.00 33.45 3.58
60 61 3.502211 ACCTGTGGACGAAATCAAATCAC 59.498 43.478 0.00 0.00 0.00 3.06
61 62 3.750371 ACCTGTGGACGAAATCAAATCA 58.250 40.909 0.00 0.00 0.00 2.57
62 63 3.751175 TGACCTGTGGACGAAATCAAATC 59.249 43.478 0.00 0.00 0.00 2.17
63 64 3.750371 TGACCTGTGGACGAAATCAAAT 58.250 40.909 0.00 0.00 0.00 2.32
64 65 3.201353 TGACCTGTGGACGAAATCAAA 57.799 42.857 0.00 0.00 0.00 2.69
65 66 2.920724 TGACCTGTGGACGAAATCAA 57.079 45.000 0.00 0.00 0.00 2.57
66 67 2.920724 TTGACCTGTGGACGAAATCA 57.079 45.000 0.00 0.00 0.00 2.57
67 68 4.766404 AATTTGACCTGTGGACGAAATC 57.234 40.909 0.00 0.00 0.00 2.17
68 69 4.340950 ACAAATTTGACCTGTGGACGAAAT 59.659 37.500 24.64 0.00 0.00 2.17
69 70 3.697045 ACAAATTTGACCTGTGGACGAAA 59.303 39.130 24.64 0.00 0.00 3.46
70 71 3.283751 ACAAATTTGACCTGTGGACGAA 58.716 40.909 24.64 0.00 0.00 3.85
71 72 2.925724 ACAAATTTGACCTGTGGACGA 58.074 42.857 24.64 0.00 0.00 4.20
72 73 3.708563 AACAAATTTGACCTGTGGACG 57.291 42.857 24.64 0.00 0.00 4.79
73 74 8.432110 AAATTTAACAAATTTGACCTGTGGAC 57.568 30.769 24.64 0.00 46.30 4.02
85 86 5.590104 GCTCACGGCAAATTTAACAAATT 57.410 34.783 0.00 0.00 42.62 1.82
99 100 0.598065 AAATCTTGGTTGCTCACGGC 59.402 50.000 0.00 0.00 42.22 5.68
100 101 2.664916 CAAAATCTTGGTTGCTCACGG 58.335 47.619 0.00 0.00 0.00 4.94
101 102 2.053627 GCAAAATCTTGGTTGCTCACG 58.946 47.619 1.26 0.00 45.34 4.35
107 108 6.649973 TGTCATTATTGGCAAAATCTTGGTTG 59.350 34.615 3.01 0.00 33.65 3.77
108 109 6.767456 TGTCATTATTGGCAAAATCTTGGTT 58.233 32.000 3.01 0.00 33.65 3.67
109 110 6.357579 TGTCATTATTGGCAAAATCTTGGT 57.642 33.333 3.01 0.00 33.65 3.67
119 120 4.776837 ACTTGGGAATTGTCATTATTGGCA 59.223 37.500 0.00 0.00 35.13 4.92
120 121 5.105392 TCACTTGGGAATTGTCATTATTGGC 60.105 40.000 0.00 0.00 0.00 4.52
121 122 6.071447 TGTCACTTGGGAATTGTCATTATTGG 60.071 38.462 0.00 0.00 0.00 3.16
122 123 6.923012 TGTCACTTGGGAATTGTCATTATTG 58.077 36.000 0.00 0.00 0.00 1.90
123 124 7.451255 TCTTGTCACTTGGGAATTGTCATTATT 59.549 33.333 0.00 0.00 0.00 1.40
124 125 6.947733 TCTTGTCACTTGGGAATTGTCATTAT 59.052 34.615 0.00 0.00 0.00 1.28
125 126 6.303054 TCTTGTCACTTGGGAATTGTCATTA 58.697 36.000 0.00 0.00 0.00 1.90
126 127 5.139727 TCTTGTCACTTGGGAATTGTCATT 58.860 37.500 0.00 0.00 0.00 2.57
127 128 4.728772 TCTTGTCACTTGGGAATTGTCAT 58.271 39.130 0.00 0.00 0.00 3.06
128 129 4.136796 CTCTTGTCACTTGGGAATTGTCA 58.863 43.478 0.00 0.00 0.00 3.58
129 130 3.503748 CCTCTTGTCACTTGGGAATTGTC 59.496 47.826 0.00 0.00 0.00 3.18
130 131 3.117512 ACCTCTTGTCACTTGGGAATTGT 60.118 43.478 0.00 0.00 0.00 2.71
131 132 3.254166 CACCTCTTGTCACTTGGGAATTG 59.746 47.826 0.00 0.00 0.00 2.32
132 133 3.138283 TCACCTCTTGTCACTTGGGAATT 59.862 43.478 0.00 0.00 0.00 2.17
133 134 2.711009 TCACCTCTTGTCACTTGGGAAT 59.289 45.455 0.00 0.00 0.00 3.01
134 135 2.123589 TCACCTCTTGTCACTTGGGAA 58.876 47.619 0.00 0.00 0.00 3.97
135 136 1.416401 GTCACCTCTTGTCACTTGGGA 59.584 52.381 0.00 0.00 0.00 4.37
136 137 1.140852 TGTCACCTCTTGTCACTTGGG 59.859 52.381 0.00 0.00 0.00 4.12
137 138 2.620251 TGTCACCTCTTGTCACTTGG 57.380 50.000 0.00 0.00 0.00 3.61
138 139 3.797039 TCTTGTCACCTCTTGTCACTTG 58.203 45.455 0.00 0.00 0.00 3.16
139 140 4.141620 ACATCTTGTCACCTCTTGTCACTT 60.142 41.667 0.00 0.00 0.00 3.16
140 141 3.389329 ACATCTTGTCACCTCTTGTCACT 59.611 43.478 0.00 0.00 0.00 3.41
141 142 3.496130 CACATCTTGTCACCTCTTGTCAC 59.504 47.826 0.00 0.00 0.00 3.67
142 143 3.387699 TCACATCTTGTCACCTCTTGTCA 59.612 43.478 0.00 0.00 0.00 3.58
143 144 3.995199 TCACATCTTGTCACCTCTTGTC 58.005 45.455 0.00 0.00 0.00 3.18
144 145 4.130118 GTTCACATCTTGTCACCTCTTGT 58.870 43.478 0.00 0.00 0.00 3.16
145 146 4.129380 TGTTCACATCTTGTCACCTCTTG 58.871 43.478 0.00 0.00 0.00 3.02
146 147 4.141620 ACTGTTCACATCTTGTCACCTCTT 60.142 41.667 0.00 0.00 0.00 2.85
147 148 3.389329 ACTGTTCACATCTTGTCACCTCT 59.611 43.478 0.00 0.00 0.00 3.69
148 149 3.496130 CACTGTTCACATCTTGTCACCTC 59.504 47.826 0.00 0.00 0.00 3.85
149 150 3.118261 ACACTGTTCACATCTTGTCACCT 60.118 43.478 0.00 0.00 0.00 4.00
150 151 3.206150 ACACTGTTCACATCTTGTCACC 58.794 45.455 0.00 0.00 0.00 4.02
151 152 3.248602 GGACACTGTTCACATCTTGTCAC 59.751 47.826 14.05 5.05 34.40 3.67
152 153 3.118445 TGGACACTGTTCACATCTTGTCA 60.118 43.478 14.05 3.61 34.40 3.58
153 154 3.466836 TGGACACTGTTCACATCTTGTC 58.533 45.455 7.49 7.49 33.13 3.18
154 155 3.118261 ACTGGACACTGTTCACATCTTGT 60.118 43.478 0.00 0.00 0.00 3.16
155 156 3.470709 ACTGGACACTGTTCACATCTTG 58.529 45.455 0.00 0.00 0.00 3.02
156 157 3.845781 ACTGGACACTGTTCACATCTT 57.154 42.857 0.00 0.00 0.00 2.40
157 158 3.259374 CCTACTGGACACTGTTCACATCT 59.741 47.826 0.00 0.00 34.57 2.90
158 159 3.258372 TCCTACTGGACACTGTTCACATC 59.742 47.826 0.00 0.00 37.46 3.06
159 160 3.239449 TCCTACTGGACACTGTTCACAT 58.761 45.455 0.00 0.00 37.46 3.21
160 161 2.628178 CTCCTACTGGACACTGTTCACA 59.372 50.000 0.00 0.00 37.46 3.58
161 162 2.628657 ACTCCTACTGGACACTGTTCAC 59.371 50.000 0.00 0.00 37.46 3.18
162 163 2.958818 ACTCCTACTGGACACTGTTCA 58.041 47.619 0.00 0.00 37.46 3.18
163 164 3.193056 GGTACTCCTACTGGACACTGTTC 59.807 52.174 0.00 0.00 37.46 3.18
164 165 3.163467 GGTACTCCTACTGGACACTGTT 58.837 50.000 0.00 0.00 37.46 3.16
165 166 2.805194 GGTACTCCTACTGGACACTGT 58.195 52.381 0.00 0.00 37.46 3.55
166 167 1.743958 CGGTACTCCTACTGGACACTG 59.256 57.143 0.00 0.00 37.46 3.66
167 168 1.954258 GCGGTACTCCTACTGGACACT 60.954 57.143 0.00 0.00 37.46 3.55
168 169 0.455005 GCGGTACTCCTACTGGACAC 59.545 60.000 0.00 0.00 37.46 3.67
169 170 0.682209 GGCGGTACTCCTACTGGACA 60.682 60.000 0.00 0.00 37.46 4.02
170 171 1.390383 GGGCGGTACTCCTACTGGAC 61.390 65.000 0.00 0.00 37.46 4.02
171 172 1.076485 GGGCGGTACTCCTACTGGA 60.076 63.158 0.00 0.00 40.69 3.86
172 173 2.132352 GGGGCGGTACTCCTACTGG 61.132 68.421 0.00 0.00 31.22 4.00
173 174 2.132352 GGGGGCGGTACTCCTACTG 61.132 68.421 0.00 0.00 31.22 2.74
174 175 1.957822 ATGGGGGCGGTACTCCTACT 61.958 60.000 0.00 0.00 31.22 2.57
175 176 1.458967 ATGGGGGCGGTACTCCTAC 60.459 63.158 0.00 0.00 31.22 3.18
176 177 1.152398 GATGGGGGCGGTACTCCTA 60.152 63.158 0.00 0.00 31.22 2.94
177 178 2.446036 GATGGGGGCGGTACTCCT 60.446 66.667 0.00 0.00 31.22 3.69
178 179 2.766651 TGATGGGGGCGGTACTCC 60.767 66.667 0.00 0.00 0.00 3.85
179 180 1.696097 ATGTGATGGGGGCGGTACTC 61.696 60.000 0.00 0.00 0.00 2.59
180 181 1.279025 AATGTGATGGGGGCGGTACT 61.279 55.000 0.00 0.00 0.00 2.73
181 182 1.101049 CAATGTGATGGGGGCGGTAC 61.101 60.000 0.00 0.00 0.00 3.34
182 183 1.225983 CAATGTGATGGGGGCGGTA 59.774 57.895 0.00 0.00 0.00 4.02
183 184 2.044053 CAATGTGATGGGGGCGGT 60.044 61.111 0.00 0.00 0.00 5.68
184 185 2.834505 CCAATGTGATGGGGGCGG 60.835 66.667 0.00 0.00 36.79 6.13
185 186 3.530260 GCCAATGTGATGGGGGCG 61.530 66.667 0.00 0.00 41.01 6.13
186 187 1.763256 ATGCCAATGTGATGGGGGC 60.763 57.895 0.00 0.00 44.82 5.80
187 188 2.035237 GCATGCCAATGTGATGGGGG 62.035 60.000 6.36 0.00 41.01 5.40
188 189 1.444250 GCATGCCAATGTGATGGGG 59.556 57.895 6.36 0.00 41.01 4.96
189 190 1.331399 TGGCATGCCAATGTGATGGG 61.331 55.000 36.95 0.00 44.12 4.00
190 191 2.203806 TGGCATGCCAATGTGATGG 58.796 52.632 36.95 0.00 44.12 3.51
200 201 3.569277 TGTTCATATACACATGGCATGCC 59.431 43.478 30.54 30.54 0.00 4.40
201 202 4.834357 TGTTCATATACACATGGCATGC 57.166 40.909 26.70 9.90 0.00 4.06
202 203 6.134040 TGTTGTTCATATACACATGGCATG 57.866 37.500 25.31 25.31 0.00 4.06
203 204 6.602803 TCTTGTTGTTCATATACACATGGCAT 59.397 34.615 0.00 0.00 0.00 4.40
204 205 5.942826 TCTTGTTGTTCATATACACATGGCA 59.057 36.000 0.00 0.00 0.00 4.92
205 206 6.128035 TGTCTTGTTGTTCATATACACATGGC 60.128 38.462 0.00 0.00 0.00 4.40
206 207 7.376435 TGTCTTGTTGTTCATATACACATGG 57.624 36.000 0.00 0.00 0.00 3.66
207 208 8.506437 ACTTGTCTTGTTGTTCATATACACATG 58.494 33.333 0.00 0.00 0.00 3.21
208 209 8.621532 ACTTGTCTTGTTGTTCATATACACAT 57.378 30.769 0.00 0.00 0.00 3.21
209 210 8.445275 AACTTGTCTTGTTGTTCATATACACA 57.555 30.769 0.00 0.00 0.00 3.72
211 212 9.990360 TCTAACTTGTCTTGTTGTTCATATACA 57.010 29.630 0.00 0.00 0.00 2.29
214 215 9.725019 TCATCTAACTTGTCTTGTTGTTCATAT 57.275 29.630 0.00 0.00 0.00 1.78
215 216 8.988934 GTCATCTAACTTGTCTTGTTGTTCATA 58.011 33.333 0.00 0.00 0.00 2.15
216 217 7.041098 GGTCATCTAACTTGTCTTGTTGTTCAT 60.041 37.037 0.00 0.00 0.00 2.57
217 218 6.260050 GGTCATCTAACTTGTCTTGTTGTTCA 59.740 38.462 0.00 0.00 0.00 3.18
218 219 6.260050 TGGTCATCTAACTTGTCTTGTTGTTC 59.740 38.462 0.00 0.00 0.00 3.18
219 220 6.119536 TGGTCATCTAACTTGTCTTGTTGTT 58.880 36.000 0.00 0.00 0.00 2.83
220 221 5.680619 TGGTCATCTAACTTGTCTTGTTGT 58.319 37.500 0.00 0.00 0.00 3.32
221 222 5.991606 TCTGGTCATCTAACTTGTCTTGTTG 59.008 40.000 0.00 0.00 0.00 3.33
222 223 6.174720 TCTGGTCATCTAACTTGTCTTGTT 57.825 37.500 0.00 0.00 0.00 2.83
223 224 5.808366 TCTGGTCATCTAACTTGTCTTGT 57.192 39.130 0.00 0.00 0.00 3.16
224 225 6.483307 TGTTTCTGGTCATCTAACTTGTCTTG 59.517 38.462 0.00 0.00 0.00 3.02
225 226 6.483640 GTGTTTCTGGTCATCTAACTTGTCTT 59.516 38.462 0.00 0.00 0.00 3.01
226 227 5.992217 GTGTTTCTGGTCATCTAACTTGTCT 59.008 40.000 0.00 0.00 0.00 3.41
227 228 5.107453 CGTGTTTCTGGTCATCTAACTTGTC 60.107 44.000 0.00 0.00 0.00 3.18
228 229 4.750098 CGTGTTTCTGGTCATCTAACTTGT 59.250 41.667 0.00 0.00 0.00 3.16
229 230 4.152402 CCGTGTTTCTGGTCATCTAACTTG 59.848 45.833 0.00 0.00 0.00 3.16
230 231 4.039973 TCCGTGTTTCTGGTCATCTAACTT 59.960 41.667 0.00 0.00 0.00 2.66
231 232 3.576982 TCCGTGTTTCTGGTCATCTAACT 59.423 43.478 0.00 0.00 0.00 2.24
232 233 3.921677 TCCGTGTTTCTGGTCATCTAAC 58.078 45.455 0.00 0.00 0.00 2.34
233 234 4.819105 ATCCGTGTTTCTGGTCATCTAA 57.181 40.909 0.00 0.00 0.00 2.10
234 235 4.819105 AATCCGTGTTTCTGGTCATCTA 57.181 40.909 0.00 0.00 0.00 1.98
235 236 3.703001 AATCCGTGTTTCTGGTCATCT 57.297 42.857 0.00 0.00 0.00 2.90
236 237 4.766404 AAAATCCGTGTTTCTGGTCATC 57.234 40.909 0.00 0.00 0.00 2.92
237 238 5.067273 TGTAAAATCCGTGTTTCTGGTCAT 58.933 37.500 0.00 0.00 0.00 3.06
238 239 4.452825 TGTAAAATCCGTGTTTCTGGTCA 58.547 39.130 0.00 0.00 0.00 4.02
239 240 5.008316 ACTTGTAAAATCCGTGTTTCTGGTC 59.992 40.000 0.00 0.00 0.00 4.02
240 241 4.885325 ACTTGTAAAATCCGTGTTTCTGGT 59.115 37.500 0.00 0.00 0.00 4.00
241 242 5.432885 ACTTGTAAAATCCGTGTTTCTGG 57.567 39.130 0.00 0.00 0.00 3.86
242 243 8.901748 CATAAACTTGTAAAATCCGTGTTTCTG 58.098 33.333 0.00 0.00 0.00 3.02
243 244 7.593644 GCATAAACTTGTAAAATCCGTGTTTCT 59.406 33.333 0.00 0.00 0.00 2.52
244 245 7.380065 TGCATAAACTTGTAAAATCCGTGTTTC 59.620 33.333 0.00 0.00 0.00 2.78
245 246 7.203910 TGCATAAACTTGTAAAATCCGTGTTT 58.796 30.769 0.00 0.00 0.00 2.83
246 247 6.740110 TGCATAAACTTGTAAAATCCGTGTT 58.260 32.000 0.00 0.00 0.00 3.32
247 248 6.320494 TGCATAAACTTGTAAAATCCGTGT 57.680 33.333 0.00 0.00 0.00 4.49
248 249 7.026562 TGATGCATAAACTTGTAAAATCCGTG 58.973 34.615 0.00 0.00 0.00 4.94
249 250 7.151999 TGATGCATAAACTTGTAAAATCCGT 57.848 32.000 0.00 0.00 0.00 4.69
250 251 8.372521 GTTTGATGCATAAACTTGTAAAATCCG 58.627 33.333 17.36 0.00 35.65 4.18
251 252 9.423061 AGTTTGATGCATAAACTTGTAAAATCC 57.577 29.630 19.75 0.00 43.71 3.01
255 256 9.685828 GGTTAGTTTGATGCATAAACTTGTAAA 57.314 29.630 25.52 16.95 43.71 2.01
256 257 8.018520 CGGTTAGTTTGATGCATAAACTTGTAA 58.981 33.333 25.52 17.17 43.71 2.41
257 258 7.173562 ACGGTTAGTTTGATGCATAAACTTGTA 59.826 33.333 25.52 14.01 43.71 2.41
258 259 6.016610 ACGGTTAGTTTGATGCATAAACTTGT 60.017 34.615 25.52 19.25 43.71 3.16
259 260 6.378582 ACGGTTAGTTTGATGCATAAACTTG 58.621 36.000 25.52 18.87 43.71 3.16
260 261 6.569179 ACGGTTAGTTTGATGCATAAACTT 57.431 33.333 25.52 16.20 43.71 2.66
261 262 5.163893 CGACGGTTAGTTTGATGCATAAACT 60.164 40.000 24.57 24.57 46.69 2.66
262 263 5.019498 CGACGGTTAGTTTGATGCATAAAC 58.981 41.667 17.12 17.12 38.09 2.01
263 264 4.436317 GCGACGGTTAGTTTGATGCATAAA 60.436 41.667 0.00 0.00 0.00 1.40
264 265 3.062909 GCGACGGTTAGTTTGATGCATAA 59.937 43.478 0.00 0.00 0.00 1.90
265 266 2.605818 GCGACGGTTAGTTTGATGCATA 59.394 45.455 0.00 0.00 0.00 3.14
266 267 1.396996 GCGACGGTTAGTTTGATGCAT 59.603 47.619 0.00 0.00 0.00 3.96
267 268 0.793861 GCGACGGTTAGTTTGATGCA 59.206 50.000 0.00 0.00 0.00 3.96
268 269 0.247145 CGCGACGGTTAGTTTGATGC 60.247 55.000 0.00 0.00 0.00 3.91
269 270 1.065358 ACGCGACGGTTAGTTTGATG 58.935 50.000 15.93 0.00 0.00 3.07
270 271 1.065358 CACGCGACGGTTAGTTTGAT 58.935 50.000 15.93 0.00 0.00 2.57
271 272 1.550659 GCACGCGACGGTTAGTTTGA 61.551 55.000 15.93 0.00 0.00 2.69
272 273 1.154727 GCACGCGACGGTTAGTTTG 60.155 57.895 15.93 0.00 0.00 2.93
273 274 1.152989 TTGCACGCGACGGTTAGTTT 61.153 50.000 15.93 0.00 0.00 2.66
274 275 1.554042 CTTGCACGCGACGGTTAGTT 61.554 55.000 15.93 0.00 0.00 2.24
275 276 2.019951 CTTGCACGCGACGGTTAGT 61.020 57.895 15.93 0.00 0.00 2.24
276 277 1.554042 AACTTGCACGCGACGGTTAG 61.554 55.000 15.93 4.61 0.00 2.34
277 278 1.550659 GAACTTGCACGCGACGGTTA 61.551 55.000 15.93 0.00 0.00 2.85
278 279 2.877974 GAACTTGCACGCGACGGTT 61.878 57.895 15.93 13.13 0.00 4.44
279 280 3.335534 GAACTTGCACGCGACGGT 61.336 61.111 15.93 4.85 0.00 4.83
280 281 1.279527 TAAGAACTTGCACGCGACGG 61.280 55.000 15.93 2.40 0.00 4.79
281 282 0.091344 CTAAGAACTTGCACGCGACG 59.909 55.000 15.93 4.12 0.00 5.12
282 283 1.124477 GTCTAAGAACTTGCACGCGAC 59.876 52.381 15.93 4.74 0.00 5.19
283 284 1.000607 AGTCTAAGAACTTGCACGCGA 60.001 47.619 15.93 0.00 0.00 5.87
284 285 1.387084 GAGTCTAAGAACTTGCACGCG 59.613 52.381 3.53 3.53 0.00 6.01
285 286 1.727335 GGAGTCTAAGAACTTGCACGC 59.273 52.381 0.00 0.00 0.00 5.34
286 287 1.986378 CGGAGTCTAAGAACTTGCACG 59.014 52.381 0.00 0.00 0.00 5.34
287 288 2.338500 CCGGAGTCTAAGAACTTGCAC 58.662 52.381 0.00 0.00 0.00 4.57
288 289 1.275291 CCCGGAGTCTAAGAACTTGCA 59.725 52.381 0.73 0.00 0.00 4.08
289 290 1.275573 ACCCGGAGTCTAAGAACTTGC 59.724 52.381 0.73 0.00 0.00 4.01
290 291 2.299297 ACACCCGGAGTCTAAGAACTTG 59.701 50.000 0.73 0.00 0.00 3.16
291 292 2.606378 ACACCCGGAGTCTAAGAACTT 58.394 47.619 0.73 0.00 0.00 2.66
292 293 2.305858 ACACCCGGAGTCTAAGAACT 57.694 50.000 0.73 0.00 0.00 3.01
293 294 4.732672 AATACACCCGGAGTCTAAGAAC 57.267 45.455 0.73 0.00 0.00 3.01
294 295 5.127682 GGTAAATACACCCGGAGTCTAAGAA 59.872 44.000 0.73 0.00 31.91 2.52
295 296 4.646492 GGTAAATACACCCGGAGTCTAAGA 59.354 45.833 0.73 0.00 31.91 2.10
296 297 4.648307 AGGTAAATACACCCGGAGTCTAAG 59.352 45.833 0.73 0.00 39.62 2.18
297 298 4.613437 AGGTAAATACACCCGGAGTCTAA 58.387 43.478 0.73 0.00 39.62 2.10
298 299 4.210331 GAGGTAAATACACCCGGAGTCTA 58.790 47.826 0.73 0.00 39.62 2.59
299 300 3.029570 GAGGTAAATACACCCGGAGTCT 58.970 50.000 0.73 0.00 39.62 3.24
300 301 2.102084 GGAGGTAAATACACCCGGAGTC 59.898 54.545 0.73 0.00 39.62 3.36
301 302 2.113807 GGAGGTAAATACACCCGGAGT 58.886 52.381 0.73 3.39 39.62 3.85
302 303 2.395619 AGGAGGTAAATACACCCGGAG 58.604 52.381 0.73 0.00 39.62 4.63
303 304 2.502538 CAAGGAGGTAAATACACCCGGA 59.497 50.000 0.73 0.00 39.62 5.14
304 305 2.502538 TCAAGGAGGTAAATACACCCGG 59.497 50.000 0.00 0.00 39.62 5.73
305 306 3.899052 TCAAGGAGGTAAATACACCCG 57.101 47.619 0.00 0.00 39.62 5.28
306 307 5.431179 TCTTCAAGGAGGTAAATACACCC 57.569 43.478 0.00 0.00 39.62 4.61
307 308 6.318900 CCATTCTTCAAGGAGGTAAATACACC 59.681 42.308 0.00 0.00 39.02 4.16
308 309 7.110155 TCCATTCTTCAAGGAGGTAAATACAC 58.890 38.462 0.00 0.00 0.00 2.90
309 310 7.265599 TCCATTCTTCAAGGAGGTAAATACA 57.734 36.000 0.00 0.00 0.00 2.29
310 311 9.274206 GTATCCATTCTTCAAGGAGGTAAATAC 57.726 37.037 0.00 0.00 34.40 1.89
311 312 8.148351 CGTATCCATTCTTCAAGGAGGTAAATA 58.852 37.037 0.00 0.00 34.40 1.40
312 313 6.992715 CGTATCCATTCTTCAAGGAGGTAAAT 59.007 38.462 0.00 0.00 34.40 1.40
313 314 6.346096 CGTATCCATTCTTCAAGGAGGTAAA 58.654 40.000 0.00 0.00 34.40 2.01
314 315 5.163343 CCGTATCCATTCTTCAAGGAGGTAA 60.163 44.000 0.00 0.00 34.40 2.85
315 316 4.344102 CCGTATCCATTCTTCAAGGAGGTA 59.656 45.833 0.00 0.00 34.40 3.08
316 317 3.134804 CCGTATCCATTCTTCAAGGAGGT 59.865 47.826 0.00 0.00 34.40 3.85
317 318 3.495100 CCCGTATCCATTCTTCAAGGAGG 60.495 52.174 0.00 0.00 34.40 4.30
318 319 3.134804 ACCCGTATCCATTCTTCAAGGAG 59.865 47.826 0.00 0.00 34.40 3.69
319 320 3.112263 ACCCGTATCCATTCTTCAAGGA 58.888 45.455 0.00 0.00 35.59 3.36
320 321 3.467803 GACCCGTATCCATTCTTCAAGG 58.532 50.000 0.00 0.00 0.00 3.61
321 322 3.123804 CGACCCGTATCCATTCTTCAAG 58.876 50.000 0.00 0.00 0.00 3.02
322 323 2.761767 TCGACCCGTATCCATTCTTCAA 59.238 45.455 0.00 0.00 0.00 2.69
323 324 2.361119 CTCGACCCGTATCCATTCTTCA 59.639 50.000 0.00 0.00 0.00 3.02
324 325 2.862921 GCTCGACCCGTATCCATTCTTC 60.863 54.545 0.00 0.00 0.00 2.87
325 326 1.068741 GCTCGACCCGTATCCATTCTT 59.931 52.381 0.00 0.00 0.00 2.52
326 327 0.674534 GCTCGACCCGTATCCATTCT 59.325 55.000 0.00 0.00 0.00 2.40
338 339 2.413371 GCAAAATCTCAGTTGCTCGACC 60.413 50.000 1.26 0.00 45.34 4.79
377 378 4.588951 ACATCTTGTCACCTCTTGTCACTA 59.411 41.667 0.00 0.00 0.00 2.74
479 480 1.188863 GGAAAGTGGCCAATGATGCT 58.811 50.000 7.24 0.00 0.00 3.79
578 579 1.021968 CGCCGGATTTTAAAGGGGAG 58.978 55.000 5.05 0.00 38.77 4.30
616 617 0.533755 GCAGCCGCAACTGGAGATAT 60.534 55.000 5.23 0.00 38.16 1.63
617 618 1.153369 GCAGCCGCAACTGGAGATA 60.153 57.895 5.23 0.00 38.16 1.98
618 619 2.437359 GCAGCCGCAACTGGAGAT 60.437 61.111 5.23 0.00 38.16 2.75
619 620 4.704833 GGCAGCCGCAACTGGAGA 62.705 66.667 0.00 0.00 41.24 3.71
707 711 5.614308 TCTTCATGAAGCTTCAAGTTCTGA 58.386 37.500 31.55 25.36 41.13 3.27
776 780 4.334118 TGCACAGCCGCAGTGGAT 62.334 61.111 16.66 0.00 42.00 3.41
866 871 4.759693 TCGCAACAAGAAAACCAGTATCAT 59.240 37.500 0.00 0.00 0.00 2.45
867 872 4.130857 TCGCAACAAGAAAACCAGTATCA 58.869 39.130 0.00 0.00 0.00 2.15
909 915 5.438761 AGTTCATCGAAGTTCCAAAAAGG 57.561 39.130 0.00 0.00 39.47 3.11
910 916 7.190920 ACTAGTTCATCGAAGTTCCAAAAAG 57.809 36.000 0.00 0.00 0.00 2.27
1026 1032 6.015688 AGAGTGAGATCTCTAGTAGGTACTCG 60.016 46.154 22.95 0.00 42.18 4.18
1255 1261 0.815734 CAGGCCAAAAGCTCAGGATG 59.184 55.000 5.01 0.00 43.05 3.51
1395 1407 0.034059 GCTCTGTGCAGTAGTGGTGT 59.966 55.000 0.00 0.00 42.31 4.16
1464 1476 1.463056 CCAACGAACTTTCTATGCGCA 59.537 47.619 14.96 14.96 0.00 6.09
1602 1614 2.444256 GGCCTACCTCGCCCTTCAT 61.444 63.158 0.00 0.00 40.78 2.57
1725 1737 1.251251 GTCAGCCCAACATTGAGCTT 58.749 50.000 0.00 0.00 39.34 3.74
1796 1808 2.694213 GTCTCCAGGCTCTTCAACTTC 58.306 52.381 0.00 0.00 0.00 3.01
1865 1882 6.673839 TTGAAATTTAGGGGACGGAAATTT 57.326 33.333 4.66 4.66 45.34 1.82
1886 1904 8.170553 CGAAGAAATGGGCTAAAATCAATTTTG 58.829 33.333 10.27 3.24 40.00 2.44
1887 1905 7.148423 GCGAAGAAATGGGCTAAAATCAATTTT 60.148 33.333 6.04 6.04 42.21 1.82
1966 1998 3.181488 TGCAGCAAATAATCAATCACCGG 60.181 43.478 0.00 0.00 0.00 5.28
1967 1999 4.031418 TGCAGCAAATAATCAATCACCG 57.969 40.909 0.00 0.00 0.00 4.94
1968 2000 4.098349 TCCTGCAGCAAATAATCAATCACC 59.902 41.667 8.66 0.00 0.00 4.02
1969 2001 5.252969 TCCTGCAGCAAATAATCAATCAC 57.747 39.130 8.66 0.00 0.00 3.06
1970 2002 5.509716 CTCCTGCAGCAAATAATCAATCA 57.490 39.130 8.66 0.00 0.00 2.57
2027 2059 1.294857 GATCAGCTTCTTCTTCCGCC 58.705 55.000 0.00 0.00 0.00 6.13
2081 2113 2.343758 GCCTCAGCACCTTCGTCA 59.656 61.111 0.00 0.00 39.53 4.35
2149 2181 3.217626 CCCTTGATGCTTCTCATTACCC 58.782 50.000 0.88 0.00 35.05 3.69
2156 2188 3.679389 TCTTGAACCCTTGATGCTTCTC 58.321 45.455 0.88 0.00 0.00 2.87
2157 2189 3.795688 TCTTGAACCCTTGATGCTTCT 57.204 42.857 0.88 0.00 0.00 2.85
2158 2190 4.012374 TCATCTTGAACCCTTGATGCTTC 58.988 43.478 0.00 0.00 37.00 3.86
2159 2191 4.038271 TCATCTTGAACCCTTGATGCTT 57.962 40.909 0.00 0.00 37.00 3.91
2160 2192 3.726557 TCATCTTGAACCCTTGATGCT 57.273 42.857 0.00 0.00 37.00 3.79
2161 2193 4.996788 ATTCATCTTGAACCCTTGATGC 57.003 40.909 0.00 0.00 39.45 3.91
2162 2194 6.264744 AGCATATTCATCTTGAACCCTTGATG 59.735 38.462 0.00 0.00 39.45 3.07
2163 2195 6.371278 AGCATATTCATCTTGAACCCTTGAT 58.629 36.000 0.00 0.00 39.45 2.57
2164 2196 5.759059 AGCATATTCATCTTGAACCCTTGA 58.241 37.500 0.00 0.00 39.45 3.02
2165 2197 6.127535 ACAAGCATATTCATCTTGAACCCTTG 60.128 38.462 8.03 13.50 39.45 3.61
2166 2198 5.954150 ACAAGCATATTCATCTTGAACCCTT 59.046 36.000 8.03 0.00 39.45 3.95
2167 2199 5.513233 ACAAGCATATTCATCTTGAACCCT 58.487 37.500 8.03 0.00 39.45 4.34
2168 2200 5.841957 ACAAGCATATTCATCTTGAACCC 57.158 39.130 8.03 0.00 39.45 4.11
2169 2201 6.127647 TGGAACAAGCATATTCATCTTGAACC 60.128 38.462 8.03 9.93 39.48 3.62
2170 2202 6.855836 TGGAACAAGCATATTCATCTTGAAC 58.144 36.000 8.03 2.40 39.48 3.18
2180 2212 5.901276 AGAATTCCCATGGAACAAGCATATT 59.099 36.000 15.22 0.00 45.07 1.28
2203 2235 1.503542 GCGAATCACCCAGCAACAG 59.496 57.895 0.00 0.00 0.00 3.16
2209 2241 1.674322 AAACCCGCGAATCACCCAG 60.674 57.895 8.23 0.00 0.00 4.45
2267 2299 2.032550 CGGATGACACATTTGATCAGCC 59.967 50.000 11.38 11.38 43.91 4.85
2268 2300 2.679837 ACGGATGACACATTTGATCAGC 59.320 45.455 0.00 0.00 0.00 4.26
2310 2344 1.562783 CTCCGGCCCCCAAAATAAAA 58.437 50.000 0.00 0.00 0.00 1.52
2395 2429 5.179742 CCAGAGGATGAGTGATAGTACGTAC 59.820 48.000 18.10 18.10 0.00 3.67
2397 2431 4.138290 CCAGAGGATGAGTGATAGTACGT 58.862 47.826 0.00 0.00 0.00 3.57
2519 3278 9.173939 GTGACTGTTATGAAATTTCACAAGAAG 57.826 33.333 22.71 18.32 40.49 2.85
2561 3320 2.985282 CACACCACCGCCAGCAAT 60.985 61.111 0.00 0.00 0.00 3.56
2649 3435 5.450453 TCACCGGATCTTAGAGAGAGAAAT 58.550 41.667 9.46 0.00 37.93 2.17
2684 3474 1.480137 TCTTGCTGGGTTGGTTTGTTG 59.520 47.619 0.00 0.00 0.00 3.33
2693 3483 4.082949 GCGTATACTTTTTCTTGCTGGGTT 60.083 41.667 0.56 0.00 0.00 4.11
2708 3499 1.837499 GAGGGGGCCTGCGTATACT 60.837 63.158 0.84 0.00 31.76 2.12
2716 3507 1.303643 GTTGAGTTGAGGGGGCCTG 60.304 63.158 0.84 0.00 31.76 4.85
2747 3538 5.594317 ACTTCTATGAAAGCACCAAGTTTGT 59.406 36.000 0.00 0.00 0.00 2.83
2833 3625 5.120830 CCTCGTCATCTTCCAAAACAACTAG 59.879 44.000 0.00 0.00 0.00 2.57
2834 3626 4.994852 CCTCGTCATCTTCCAAAACAACTA 59.005 41.667 0.00 0.00 0.00 2.24
2835 3627 3.815401 CCTCGTCATCTTCCAAAACAACT 59.185 43.478 0.00 0.00 0.00 3.16
2853 3645 1.571919 CCGCTCTAACAATTCCCTCG 58.428 55.000 0.00 0.00 0.00 4.63
2873 3665 2.094762 TGCTCTTCTAAAGGGAACGC 57.905 50.000 0.00 0.00 0.00 4.84
2875 3667 6.981722 TGAATTTTGCTCTTCTAAAGGGAAC 58.018 36.000 0.00 0.00 0.00 3.62
2938 3730 2.282555 CGTCCATAGTTTGCATCTCACG 59.717 50.000 0.00 0.00 0.00 4.35
2989 3783 1.474648 CGATGTGCGACCGTCATCAG 61.475 60.000 19.83 13.19 44.57 2.90
2990 3784 1.516169 CGATGTGCGACCGTCATCA 60.516 57.895 19.83 0.00 44.57 3.07
3043 3837 3.266636 TCGAAGTCACACATGTGTTGTT 58.733 40.909 28.64 20.37 45.76 2.83
3092 3886 1.376466 GCTTTCACCCCAGAGCTCA 59.624 57.895 17.77 0.00 32.54 4.26
3099 3893 0.555769 AGACCTTTGCTTTCACCCCA 59.444 50.000 0.00 0.00 0.00 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.