Multiple sequence alignment - TraesCS6D01G285200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G285200 chr6D 100.000 7069 0 0 1 7069 392894188 392901256 0.000000e+00 13055.0
1 TraesCS6D01G285200 chr6B 94.777 3657 129 25 2951 6578 587384686 587388309 0.000000e+00 5638.0
2 TraesCS6D01G285200 chr6B 93.695 1919 82 16 877 2789 587382802 587384687 0.000000e+00 2837.0
3 TraesCS6D01G285200 chr6B 86.749 966 53 30 1 918 587381873 587382811 0.000000e+00 1005.0
4 TraesCS6D01G285200 chr6B 90.991 222 10 4 6847 7067 587388471 587388683 2.490000e-74 291.0
5 TraesCS6D01G285200 chr6B 75.194 387 64 29 286 658 610042195 610042563 3.410000e-33 154.0
6 TraesCS6D01G285200 chr6A 93.618 3494 143 40 2925 6382 539706752 539710201 0.000000e+00 5144.0
7 TraesCS6D01G285200 chr6A 92.853 1945 85 21 877 2815 539704813 539706709 0.000000e+00 2772.0
8 TraesCS6D01G285200 chr6A 87.933 953 64 30 1 918 539703886 539704822 0.000000e+00 1075.0
9 TraesCS6D01G285200 chr6A 79.615 260 43 9 385 639 7968310 7968564 2.030000e-40 178.0
10 TraesCS6D01G285200 chr1A 80.037 536 75 25 338 852 40145738 40146262 1.120000e-97 368.0
11 TraesCS6D01G285200 chr1A 79.152 283 44 11 365 635 483649891 483649612 1.570000e-41 182.0
12 TraesCS6D01G285200 chr1D 100.000 170 0 0 2787 2956 238940381 238940212 1.480000e-81 315.0
13 TraesCS6D01G285200 chr1D 95.263 190 5 3 2771 2960 423269685 423269500 1.490000e-76 298.0
14 TraesCS6D01G285200 chr1D 77.823 496 67 24 367 852 389242147 389241685 4.200000e-67 267.0
15 TraesCS6D01G285200 chr2D 98.857 175 2 0 2784 2958 554128205 554128379 5.320000e-81 313.0
16 TraesCS6D01G285200 chr2D 75.922 515 88 29 346 852 50159280 50158794 1.530000e-56 231.0
17 TraesCS6D01G285200 chr2D 100.000 28 0 0 6493 6520 535218218 535218191 1.300000e-02 52.8
18 TraesCS6D01G285200 chr3B 100.000 168 0 0 2786 2953 120616911 120617078 1.910000e-80 311.0
19 TraesCS6D01G285200 chr3B 95.745 188 6 2 2788 2974 655849421 655849607 1.150000e-77 302.0
20 TraesCS6D01G285200 chr1B 97.778 180 2 2 2788 2967 628050851 628050674 6.890000e-80 309.0
21 TraesCS6D01G285200 chr1B 95.263 190 5 4 2788 2977 476874743 476874928 1.490000e-76 298.0
22 TraesCS6D01G285200 chr4D 96.739 184 2 4 2788 2970 359125648 359125468 3.200000e-78 303.0
23 TraesCS6D01G285200 chr2A 95.699 186 4 3 2788 2972 310408098 310407916 5.360000e-76 296.0
24 TraesCS6D01G285200 chr2A 100.000 28 0 0 6493 6520 678418988 678418961 1.300000e-02 52.8
25 TraesCS6D01G285200 chr4B 78.105 475 65 13 388 853 665824089 665823645 1.510000e-66 265.0
26 TraesCS6D01G285200 chr5B 82.886 298 37 12 352 638 398440596 398440302 9.100000e-64 255.0
27 TraesCS6D01G285200 chr5B 79.870 308 39 19 345 635 398441001 398441302 3.340000e-48 204.0
28 TraesCS6D01G285200 chr5A 77.568 477 59 17 388 853 705786118 705785679 1.970000e-60 244.0
29 TraesCS6D01G285200 chr5D 80.130 307 45 14 339 639 445966738 445967034 1.540000e-51 215.0
30 TraesCS6D01G285200 chr5D 100.000 28 0 0 6490 6517 409993292 409993265 1.300000e-02 52.8
31 TraesCS6D01G285200 chr3D 74.165 449 72 36 231 658 611380505 611380080 5.710000e-31 147.0
32 TraesCS6D01G285200 chr2B 100.000 29 0 0 6493 6521 636546931 636546903 4.000000e-03 54.7
33 TraesCS6D01G285200 chr4A 100.000 28 0 0 6490 6517 519229075 519229102 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G285200 chr6D 392894188 392901256 7068 False 13055.00 13055 100.000 1 7069 1 chr6D.!!$F1 7068
1 TraesCS6D01G285200 chr6B 587381873 587388683 6810 False 2442.75 5638 91.553 1 7067 4 chr6B.!!$F2 7066
2 TraesCS6D01G285200 chr6A 539703886 539710201 6315 False 2997.00 5144 91.468 1 6382 3 chr6A.!!$F2 6381
3 TraesCS6D01G285200 chr1A 40145738 40146262 524 False 368.00 368 80.037 338 852 1 chr1A.!!$F1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
81 82 0.721154 CCATTCGCGCACGCATATAT 59.279 50.000 16.04 0.0 42.06 0.86 F
1007 1157 0.814010 CGATCCAAACCCTAAGCCGG 60.814 60.000 0.00 0.0 0.00 6.13 F
1108 1258 1.514443 CTTCCTCGACGTCCGCTTC 60.514 63.158 10.58 0.0 38.37 3.86 F
2283 2434 0.944386 AACACTGTGACGATTGCACC 59.056 50.000 15.86 0.0 35.43 5.01 F
3164 3321 0.114954 ACTTGGACATTGGGGCATGT 59.885 50.000 0.00 0.0 0.00 3.21 F
3277 3434 1.072331 GTTTGAGCTGAGTCCTTCCCA 59.928 52.381 0.00 0.0 0.00 4.37 F
4844 5005 0.734253 CGGTTCAGGCAAGAGTCTCG 60.734 60.000 0.00 0.0 0.00 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1681 1831 0.318441 CCGCTGGTCTCAACTCTCAA 59.682 55.000 0.00 0.0 0.0 3.02 R
2270 2421 0.438830 GAACTCGGTGCAATCGTCAC 59.561 55.000 9.95 0.0 0.0 3.67 R
2999 3155 1.064240 CAGTTTTTATACCCGCCCCCT 60.064 52.381 0.00 0.0 0.0 4.79 R
4121 4282 0.890683 CATGGTGGGTTTTCTGGAGC 59.109 55.000 0.00 0.0 0.0 4.70 R
4828 4989 0.318441 CCACGAGACTCTTGCCTGAA 59.682 55.000 3.44 0.0 0.0 3.02 R
5135 5296 1.993956 AGCCATGTTTAACAGCACCA 58.006 45.000 11.02 0.0 0.0 4.17 R
6639 6855 0.035820 ACCATGCCGTACGTCCAAAT 60.036 50.000 15.21 0.0 0.0 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 0.721154 CCATTCGCGCACGCATATAT 59.279 50.000 16.04 0.00 42.06 0.86
91 92 5.563751 CGCGCACGCATATATTAAGAAAAAT 59.436 36.000 16.04 0.00 42.06 1.82
127 128 1.202879 AGAACCAAGGTTTGATCCGCA 60.203 47.619 5.87 0.00 38.60 5.69
179 180 5.884792 AGTTAGTGATAAGTAGTAGGTGCGT 59.115 40.000 0.00 0.00 0.00 5.24
218 219 4.379339 TTCAAACCGGTTTTCTTTGAGG 57.621 40.909 29.74 15.71 35.78 3.86
219 220 2.100087 TCAAACCGGTTTTCTTTGAGGC 59.900 45.455 29.74 0.00 31.72 4.70
442 490 9.691362 ATACATGGTCAACAGTTTTTCAAATAC 57.309 29.630 0.00 0.00 0.00 1.89
443 491 7.781056 ACATGGTCAACAGTTTTTCAAATACT 58.219 30.769 0.00 0.00 0.00 2.12
444 492 8.257306 ACATGGTCAACAGTTTTTCAAATACTT 58.743 29.630 0.00 0.00 0.00 2.24
445 493 8.542132 CATGGTCAACAGTTTTTCAAATACTTG 58.458 33.333 0.00 0.00 0.00 3.16
446 494 7.607250 TGGTCAACAGTTTTTCAAATACTTGT 58.393 30.769 0.00 0.00 33.94 3.16
447 495 8.091449 TGGTCAACAGTTTTTCAAATACTTGTT 58.909 29.630 0.00 0.00 33.94 2.83
448 496 8.592155 GGTCAACAGTTTTTCAAATACTTGTTC 58.408 33.333 0.00 0.00 33.94 3.18
586 682 9.932699 TTTTTCAAATACTCGTTCGACATTTTA 57.067 25.926 0.00 0.42 0.00 1.52
800 911 3.272334 GCCCATAAGCTCGCGTGG 61.272 66.667 5.77 4.90 0.00 4.94
818 929 1.080434 GTTCAGCGAGTCGGAAGCT 60.080 57.895 15.52 0.00 42.64 3.74
905 1024 2.480802 GCTCTCCGTTCCTCAGAAAAAC 59.519 50.000 0.00 0.00 32.58 2.43
912 1031 5.184287 TCCGTTCCTCAGAAAAACAAAAACT 59.816 36.000 0.00 0.00 32.58 2.66
913 1032 6.374894 TCCGTTCCTCAGAAAAACAAAAACTA 59.625 34.615 0.00 0.00 32.58 2.24
914 1033 6.471198 CCGTTCCTCAGAAAAACAAAAACTAC 59.529 38.462 0.00 0.00 32.58 2.73
915 1034 7.024768 CGTTCCTCAGAAAAACAAAAACTACA 58.975 34.615 0.00 0.00 32.58 2.74
916 1035 7.218204 CGTTCCTCAGAAAAACAAAAACTACAG 59.782 37.037 0.00 0.00 32.58 2.74
917 1036 6.560711 TCCTCAGAAAAACAAAAACTACAGC 58.439 36.000 0.00 0.00 0.00 4.40
976 1126 4.241555 CCCGCTTCCCCCATCTCG 62.242 72.222 0.00 0.00 0.00 4.04
1007 1157 0.814010 CGATCCAAACCCTAAGCCGG 60.814 60.000 0.00 0.00 0.00 6.13
1060 1210 3.147595 TCGCCGCTGCTCCATAGT 61.148 61.111 0.00 0.00 34.43 2.12
1096 1246 4.882396 GAGCTCCGGCGCTTCCTC 62.882 72.222 21.89 3.76 41.08 3.71
1108 1258 1.514443 CTTCCTCGACGTCCGCTTC 60.514 63.158 10.58 0.00 38.37 3.86
1349 1499 5.839621 GCAAATGCTCATGGAATTACTGAT 58.160 37.500 0.00 0.00 38.21 2.90
1499 1649 2.359107 ACCGACGTGGCGAGAGTA 60.359 61.111 0.00 0.00 43.94 2.59
1553 1703 7.709149 TCTCTGAAGATCACACTTTAGATCA 57.291 36.000 0.00 0.00 42.36 2.92
1680 1830 7.838771 TGTGTTATGATTCATGAGTTGAGAG 57.161 36.000 9.46 0.00 35.27 3.20
1681 1831 7.389232 TGTGTTATGATTCATGAGTTGAGAGT 58.611 34.615 9.46 0.00 35.27 3.24
1682 1832 7.879677 TGTGTTATGATTCATGAGTTGAGAGTT 59.120 33.333 9.46 0.00 35.27 3.01
1683 1833 8.173775 GTGTTATGATTCATGAGTTGAGAGTTG 58.826 37.037 9.46 0.00 35.27 3.16
1684 1834 8.096414 TGTTATGATTCATGAGTTGAGAGTTGA 58.904 33.333 9.46 0.00 35.27 3.18
1685 1835 8.602328 GTTATGATTCATGAGTTGAGAGTTGAG 58.398 37.037 9.46 0.00 35.27 3.02
1686 1836 6.350629 TGATTCATGAGTTGAGAGTTGAGA 57.649 37.500 0.00 0.00 35.27 3.27
1687 1837 6.396450 TGATTCATGAGTTGAGAGTTGAGAG 58.604 40.000 0.00 0.00 35.27 3.20
1688 1838 5.798125 TTCATGAGTTGAGAGTTGAGAGT 57.202 39.130 0.00 0.00 35.27 3.24
1689 1839 5.798125 TCATGAGTTGAGAGTTGAGAGTT 57.202 39.130 0.00 0.00 0.00 3.01
1690 1840 5.536260 TCATGAGTTGAGAGTTGAGAGTTG 58.464 41.667 0.00 0.00 0.00 3.16
1710 1860 2.034687 ACCAGCGGCTCATTGCTT 59.965 55.556 0.00 0.00 40.03 3.91
1723 1873 5.388475 GGCTCATTGCTTAATATGTCGTACG 60.388 44.000 9.53 9.53 42.39 3.67
1728 1878 5.239359 TGCTTAATATGTCGTACGAGTGT 57.761 39.130 20.18 10.07 0.00 3.55
1787 1937 3.572255 AGTGGTTTTATGTGGCAAATCGT 59.428 39.130 0.00 0.00 0.00 3.73
1883 2033 2.954318 CTGTTCTGGCCCTCAATTATGG 59.046 50.000 0.00 0.00 0.00 2.74
1938 2088 8.737175 CCTCATTTTGATAATGTGGATCTATGG 58.263 37.037 10.03 0.00 41.41 2.74
2005 2155 8.190122 GCATTTCATTATTGTGTCCATGTTAGA 58.810 33.333 0.00 0.00 0.00 2.10
2010 2160 9.241919 TCATTATTGTGTCCATGTTAGATTGTT 57.758 29.630 0.00 0.00 0.00 2.83
2013 2163 9.733556 TTATTGTGTCCATGTTAGATTGTTAGT 57.266 29.630 0.00 0.00 0.00 2.24
2014 2164 8.635765 ATTGTGTCCATGTTAGATTGTTAGTT 57.364 30.769 0.00 0.00 0.00 2.24
2015 2165 7.433708 TGTGTCCATGTTAGATTGTTAGTTG 57.566 36.000 0.00 0.00 0.00 3.16
2016 2166 6.072728 TGTGTCCATGTTAGATTGTTAGTTGC 60.073 38.462 0.00 0.00 0.00 4.17
2017 2167 6.149474 GTGTCCATGTTAGATTGTTAGTTGCT 59.851 38.462 0.00 0.00 0.00 3.91
2018 2168 6.149308 TGTCCATGTTAGATTGTTAGTTGCTG 59.851 38.462 0.00 0.00 0.00 4.41
2019 2169 6.371548 GTCCATGTTAGATTGTTAGTTGCTGA 59.628 38.462 0.00 0.00 0.00 4.26
2090 2240 2.593346 ATCAGCGATCTTCCACTGAC 57.407 50.000 0.00 0.00 41.63 3.51
2153 2303 5.536161 TCCTTATGGCAGCCAATATTCTTTC 59.464 40.000 20.84 0.00 36.95 2.62
2283 2434 0.944386 AACACTGTGACGATTGCACC 59.056 50.000 15.86 0.00 35.43 5.01
2308 2459 2.795121 CTTCGACAATGAAGAAGCCG 57.205 50.000 8.76 0.00 46.64 5.52
2353 2505 9.504708 TTGAAATGCCAAATTAATGAGTGAAAT 57.495 25.926 0.00 0.00 0.00 2.17
2487 2639 2.437716 ATGGCCGGTACTTTGCGG 60.438 61.111 1.90 4.14 0.00 5.69
2490 2642 1.375780 GGCCGGTACTTTGCGGTAA 60.376 57.895 1.90 0.00 0.00 2.85
2529 2681 9.394767 GATTTTTATAATTCCCATTTGGTTGCT 57.605 29.630 0.00 0.00 34.77 3.91
2549 2703 2.586258 AGATGGTGCGTTACTGCTAG 57.414 50.000 1.68 0.00 35.36 3.42
2663 2819 3.487544 GCGCTCCTCAATTTGTGTTATCC 60.488 47.826 0.00 0.00 0.00 2.59
2670 2826 5.183140 CCTCAATTTGTGTTATCCGGAGTTT 59.817 40.000 11.34 0.00 0.00 2.66
2671 2827 6.007936 TCAATTTGTGTTATCCGGAGTTTG 57.992 37.500 11.34 3.39 0.00 2.93
2793 2949 3.951663 ACACTGCCAAAGTAATACTCCC 58.048 45.455 0.00 0.00 36.83 4.30
2799 2955 3.370209 GCCAAAGTAATACTCCCTCCGTT 60.370 47.826 0.00 0.00 0.00 4.44
2802 2958 3.684408 AGTAATACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
2808 2964 7.954620 AGTAATACTCCCTCCGTTCCTAAATAT 59.045 37.037 0.00 0.00 0.00 1.28
2809 2965 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
2815 2971 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2816 2972 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2817 2973 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2818 2974 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2819 2975 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2820 2976 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2821 2977 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2834 2990 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2835 2991 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2840 2996 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2844 3000 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2845 3001 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
2847 3003 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2848 3004 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2853 3009 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2855 3011 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2856 3012 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2857 3013 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2858 3014 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2859 3015 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2860 3016 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2862 3018 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2863 3019 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2866 3022 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2867 3023 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2868 3024 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2901 3057 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
2903 3059 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
2904 3060 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
2905 3061 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
2906 3062 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
2907 3063 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
2908 3064 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
2909 3065 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
2910 3066 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
2911 3067 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
2912 3068 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
2913 3069 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
2914 3070 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
2915 3071 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
2916 3072 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
2917 3073 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
2918 3074 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
2919 3075 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
2920 3076 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
2921 3077 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
2922 3078 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
2923 3079 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
2924 3080 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
2928 3084 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
2929 3085 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
2999 3155 3.560453 GGGCAAAGAATGTACCACACCTA 60.560 47.826 0.00 0.00 0.00 3.08
3025 3182 6.240145 GGGGCGGGTATAAAAACTGATATTA 58.760 40.000 0.00 0.00 0.00 0.98
3103 3260 5.008613 TCTGTGGTTATCAAGTCACAAAAGC 59.991 40.000 0.00 0.00 39.26 3.51
3105 3262 4.024387 GTGGTTATCAAGTCACAAAAGCGA 60.024 41.667 0.00 0.00 0.00 4.93
3109 3266 4.675190 ATCAAGTCACAAAAGCGAGATG 57.325 40.909 0.00 0.00 0.00 2.90
3159 3316 3.009033 TGAGTAAGACTTGGACATTGGGG 59.991 47.826 0.00 0.00 0.00 4.96
3164 3321 0.114954 ACTTGGACATTGGGGCATGT 59.885 50.000 0.00 0.00 0.00 3.21
3255 3412 2.196749 CACTCGATTCATTACAGCGCT 58.803 47.619 2.64 2.64 0.00 5.92
3277 3434 1.072331 GTTTGAGCTGAGTCCTTCCCA 59.928 52.381 0.00 0.00 0.00 4.37
3367 3525 5.975693 TTTTTAGGCCGAAAGATGTCATT 57.024 34.783 11.07 0.00 0.00 2.57
3426 3584 3.788227 TCCAGTGGTATTGCTGACTTT 57.212 42.857 9.54 0.00 34.87 2.66
3508 3667 3.820467 AGCACACCATTCAGAATTTTCGA 59.180 39.130 0.00 0.00 0.00 3.71
3509 3668 4.460382 AGCACACCATTCAGAATTTTCGAT 59.540 37.500 0.00 0.00 0.00 3.59
3511 3670 5.287035 GCACACCATTCAGAATTTTCGATTC 59.713 40.000 0.00 0.00 0.00 2.52
3512 3671 6.615088 CACACCATTCAGAATTTTCGATTCT 58.385 36.000 0.00 0.00 38.78 2.40
3513 3672 6.744537 CACACCATTCAGAATTTTCGATTCTC 59.255 38.462 0.00 0.00 36.32 2.87
3555 3715 6.940739 TCTTTCTTTCCTACTCTGATCAAGG 58.059 40.000 4.97 4.97 0.00 3.61
3719 3879 6.135819 TCATCATGGAGCATTAGGATGATT 57.864 37.500 7.16 0.00 36.99 2.57
3754 3914 3.618594 GCTAATTGACTTGACGCTGATGA 59.381 43.478 0.00 0.00 0.00 2.92
3828 3988 8.090788 AGATTAGATGGCTTTAGGTGTTTAGA 57.909 34.615 0.00 0.00 0.00 2.10
3829 3989 8.207545 AGATTAGATGGCTTTAGGTGTTTAGAG 58.792 37.037 0.00 0.00 0.00 2.43
3830 3990 7.490657 TTAGATGGCTTTAGGTGTTTAGAGA 57.509 36.000 0.00 0.00 0.00 3.10
4121 4282 6.150318 GCTAATTCTGCCATCATCATCTTTG 58.850 40.000 0.00 0.00 0.00 2.77
4160 4321 8.509690 CACCATGTTGCTATTGGATATCTTAAG 58.490 37.037 2.05 0.00 34.52 1.85
4481 4642 1.160137 AACGCAGAAAAGCTAGGCAG 58.840 50.000 0.00 0.00 0.00 4.85
4497 4658 2.167219 CAGCTACATGGGCACGACG 61.167 63.158 13.84 0.00 0.00 5.12
4517 4678 1.535462 GTGGGAAATCAACCACGTCAG 59.465 52.381 0.00 0.00 46.61 3.51
4814 4975 4.550076 AGAAAGTAGCTCAAGTGATGCT 57.450 40.909 0.00 9.27 40.43 3.79
4844 5005 0.734253 CGGTTCAGGCAAGAGTCTCG 60.734 60.000 0.00 0.00 0.00 4.04
5090 5251 3.181459 GGAGTAAGAGGATTGAAGGAGCC 60.181 52.174 0.00 0.00 0.00 4.70
5135 5296 4.338879 ACTGCAAATCTCCAGCAATAACT 58.661 39.130 0.00 0.00 37.89 2.24
5156 5317 3.491342 TGGTGCTGTTAAACATGGCTTA 58.509 40.909 0.00 0.00 0.00 3.09
5351 5512 3.313249 CACAATCCATTAATGCAGCTCGA 59.687 43.478 10.11 1.35 0.00 4.04
5357 5518 3.494626 CCATTAATGCAGCTCGATACGTT 59.505 43.478 10.11 0.00 0.00 3.99
5415 5576 9.965824 TGTTCTTTCTTGAAATGGAAAATCTAC 57.034 29.630 0.00 0.00 32.17 2.59
5420 5581 7.452880 TCTTGAAATGGAAAATCTACCTGTG 57.547 36.000 0.00 0.00 0.00 3.66
5474 5635 8.509690 CAGCAAGAGATAAATCAACTGAAAGAA 58.490 33.333 0.00 0.00 37.43 2.52
5492 5653 7.632861 TGAAAGAATTCAGATCAGAATGGGTA 58.367 34.615 13.47 0.00 40.59 3.69
5504 5665 9.391227 AGATCAGAATGGGTAGATAAGATTTCT 57.609 33.333 0.00 0.00 36.16 2.52
5507 5668 9.661954 TCAGAATGGGTAGATAAGATTTCTACT 57.338 33.333 9.87 0.00 39.47 2.57
5522 5683 3.398318 TCTACTGTCATCCTTAGGGCA 57.602 47.619 0.00 0.00 0.00 5.36
5540 5701 1.091771 CATTTGATGCTCGCTCCCGT 61.092 55.000 0.00 0.00 35.54 5.28
5543 5704 1.960040 TTGATGCTCGCTCCCGTGAT 61.960 55.000 0.00 0.00 35.54 3.06
5552 5713 2.034685 TCGCTCCCGTGATTATCTGAAG 59.965 50.000 0.00 0.00 35.54 3.02
5576 5737 4.341783 AGGCAGTGGCAGGAGCAC 62.342 66.667 20.04 0.00 44.61 4.40
5588 5749 0.605589 AGGAGCACTCAGAAGAACCG 59.394 55.000 0.00 0.00 0.00 4.44
5591 5752 2.035442 GCACTCAGAAGAACCGGCC 61.035 63.158 0.00 0.00 0.00 6.13
5600 5761 0.474184 AAGAACCGGCCATATCCAGG 59.526 55.000 0.00 0.00 0.00 4.45
5644 5805 5.012148 GCTACATTCAAGGGAGGCTATCTAA 59.988 44.000 0.00 0.00 0.00 2.10
5693 5854 6.116126 GGATTTTGTAACAGTATGGAGAGCT 58.884 40.000 0.00 0.00 43.62 4.09
5708 5869 3.357079 GCTGTGGCAACCGGAGTG 61.357 66.667 9.46 7.05 38.54 3.51
5729 5890 1.288127 CCAGCTGCTTTTCACAGGC 59.712 57.895 8.66 0.00 35.62 4.85
5794 5955 1.331138 GCTTCATGCTGATCTGAGTGC 59.669 52.381 3.42 0.00 38.95 4.40
5801 5962 3.332919 TGCTGATCTGAGTGCTCTTTTC 58.667 45.455 3.42 0.00 0.00 2.29
5859 6020 1.203013 TCTTCCCAAGACTGTCCGAGA 60.203 52.381 3.76 0.00 31.20 4.04
5860 6021 1.827969 CTTCCCAAGACTGTCCGAGAT 59.172 52.381 3.76 0.00 0.00 2.75
6035 6197 5.303078 ACAAGATATTAGACATCGTCAGGCT 59.697 40.000 0.00 0.00 34.60 4.58
6036 6198 6.183360 ACAAGATATTAGACATCGTCAGGCTT 60.183 38.462 0.00 0.00 34.60 4.35
6076 6238 5.603170 ATTGCCTTATTGGAATGGACTTG 57.397 39.130 0.00 0.00 38.35 3.16
6131 6323 7.450014 GTCATCCTCTTTCAGAGATGTATCCTA 59.550 40.741 2.13 0.00 45.07 2.94
6162 6371 9.132923 TGTTGATTGGTGTAATAAGGTTGTAAA 57.867 29.630 0.00 0.00 0.00 2.01
6188 6397 6.318900 AGTGAGTTTTCCCTTTTGTAACAGAG 59.681 38.462 0.00 0.00 0.00 3.35
6189 6398 5.592688 TGAGTTTTCCCTTTTGTAACAGAGG 59.407 40.000 0.00 0.00 0.00 3.69
6190 6399 5.762279 AGTTTTCCCTTTTGTAACAGAGGA 58.238 37.500 0.00 0.00 0.00 3.71
6211 6420 2.844122 AAACTGTTTTGCTGACGGAC 57.156 45.000 0.00 0.00 0.00 4.79
6307 6520 3.482598 CGATCGTTCAGATGCAGTGAAAC 60.483 47.826 14.22 5.53 40.26 2.78
6408 6621 4.517075 TCGCATTATTGTGGTTTGACAGAA 59.483 37.500 0.00 0.00 34.03 3.02
6409 6622 4.853196 CGCATTATTGTGGTTTGACAGAAG 59.147 41.667 0.00 0.00 0.00 2.85
6413 6626 1.948104 TGTGGTTTGACAGAAGGACG 58.052 50.000 0.00 0.00 0.00 4.79
6422 6635 2.432874 TGACAGAAGGACGGACTTTGAA 59.567 45.455 0.00 0.00 0.00 2.69
6423 6636 2.801111 GACAGAAGGACGGACTTTGAAC 59.199 50.000 0.00 0.00 0.00 3.18
6424 6637 1.792949 CAGAAGGACGGACTTTGAACG 59.207 52.381 0.00 0.00 0.00 3.95
6433 6646 2.127758 CTTTGAACGACGGCGCAC 60.128 61.111 12.58 5.46 42.48 5.34
6436 6649 2.096481 TTTGAACGACGGCGCACTTC 62.096 55.000 12.58 8.30 42.48 3.01
6455 6668 2.890814 TCCTTTCTCTTTCTCGGTCCT 58.109 47.619 0.00 0.00 0.00 3.85
6464 6677 2.287977 TTCTCGGTCCTTCTCACTCA 57.712 50.000 0.00 0.00 0.00 3.41
6468 6681 1.216710 GGTCCTTCTCACTCAGCCG 59.783 63.158 0.00 0.00 0.00 5.52
6497 6710 2.592308 CAGAGGGGCTAGGGCAAC 59.408 66.667 0.00 0.00 40.87 4.17
6499 6712 1.690985 AGAGGGGCTAGGGCAACTC 60.691 63.158 0.00 6.84 40.54 3.01
6500 6713 2.692741 AGGGGCTAGGGCAACTCC 60.693 66.667 0.00 0.00 40.87 3.85
6502 6715 2.612493 GGGGCTAGGGCAACTCCAA 61.612 63.158 0.00 0.00 40.87 3.53
6503 6716 1.378646 GGGCTAGGGCAACTCCAAC 60.379 63.158 0.00 0.00 40.87 3.77
6504 6717 1.745489 GGCTAGGGCAACTCCAACG 60.745 63.158 0.00 0.00 40.87 4.10
6507 6720 1.003839 TAGGGCAACTCCAACGCAG 60.004 57.895 0.00 0.00 36.21 5.18
6508 6721 1.476845 TAGGGCAACTCCAACGCAGA 61.477 55.000 0.00 0.00 36.21 4.26
6509 6722 1.675641 GGGCAACTCCAACGCAGAT 60.676 57.895 0.00 0.00 36.21 2.90
6510 6723 1.648467 GGGCAACTCCAACGCAGATC 61.648 60.000 0.00 0.00 36.21 2.75
6511 6724 0.955428 GGCAACTCCAACGCAGATCA 60.955 55.000 0.00 0.00 34.01 2.92
6512 6725 1.089920 GCAACTCCAACGCAGATCAT 58.910 50.000 0.00 0.00 0.00 2.45
6513 6726 1.063174 GCAACTCCAACGCAGATCATC 59.937 52.381 0.00 0.00 0.00 2.92
6514 6727 2.349590 CAACTCCAACGCAGATCATCA 58.650 47.619 0.00 0.00 0.00 3.07
6530 6746 7.182761 CAGATCATCAAATGTTTAGACCGAAC 58.817 38.462 0.00 0.00 0.00 3.95
6554 6770 4.082733 GGTTTCCAGACACTTTTAGCCATC 60.083 45.833 0.00 0.00 0.00 3.51
6578 6794 2.752903 ACACGGCTAACCAAATTCATCC 59.247 45.455 0.00 0.00 34.57 3.51
6579 6795 2.014128 ACGGCTAACCAAATTCATCCG 58.986 47.619 0.00 0.00 41.18 4.18
6580 6796 1.333619 CGGCTAACCAAATTCATCCGG 59.666 52.381 0.00 0.00 34.57 5.14
6581 6797 2.650322 GGCTAACCAAATTCATCCGGA 58.350 47.619 6.61 6.61 35.26 5.14
6582 6798 3.222603 GGCTAACCAAATTCATCCGGAT 58.777 45.455 12.38 12.38 35.26 4.18
6583 6799 3.253432 GGCTAACCAAATTCATCCGGATC 59.747 47.826 15.88 0.00 35.26 3.36
6584 6800 3.058914 GCTAACCAAATTCATCCGGATCG 60.059 47.826 15.88 10.69 0.00 3.69
6594 6810 2.104331 CCGGATCGGTTCAGACGG 59.896 66.667 0.00 0.00 42.73 4.79
6595 6811 2.582498 CGGATCGGTTCAGACGGC 60.582 66.667 0.00 0.00 0.00 5.68
6596 6812 2.893398 GGATCGGTTCAGACGGCT 59.107 61.111 0.00 0.00 0.00 5.52
6597 6813 1.519455 GGATCGGTTCAGACGGCTG 60.519 63.158 13.65 13.65 43.67 4.85
6607 6823 2.620251 CAGACGGCTGAATCCCATAA 57.380 50.000 14.96 0.00 45.17 1.90
6608 6824 2.917933 CAGACGGCTGAATCCCATAAA 58.082 47.619 14.96 0.00 45.17 1.40
6609 6825 2.614057 CAGACGGCTGAATCCCATAAAC 59.386 50.000 14.96 0.00 45.17 2.01
6610 6826 2.505819 AGACGGCTGAATCCCATAAACT 59.494 45.455 0.00 0.00 0.00 2.66
6611 6827 2.614057 GACGGCTGAATCCCATAAACTG 59.386 50.000 0.00 0.00 0.00 3.16
6612 6828 2.238646 ACGGCTGAATCCCATAAACTGA 59.761 45.455 0.00 0.00 0.00 3.41
6613 6829 2.614057 CGGCTGAATCCCATAAACTGAC 59.386 50.000 0.00 0.00 0.00 3.51
6614 6830 2.952310 GGCTGAATCCCATAAACTGACC 59.048 50.000 0.00 0.00 0.00 4.02
6615 6831 3.372025 GGCTGAATCCCATAAACTGACCT 60.372 47.826 0.00 0.00 0.00 3.85
6616 6832 3.879892 GCTGAATCCCATAAACTGACCTC 59.120 47.826 0.00 0.00 0.00 3.85
6617 6833 4.626287 GCTGAATCCCATAAACTGACCTCA 60.626 45.833 0.00 0.00 0.00 3.86
6618 6834 5.500234 CTGAATCCCATAAACTGACCTCAA 58.500 41.667 0.00 0.00 0.00 3.02
6619 6835 5.886609 TGAATCCCATAAACTGACCTCAAA 58.113 37.500 0.00 0.00 0.00 2.69
6620 6836 6.493166 TGAATCCCATAAACTGACCTCAAAT 58.507 36.000 0.00 0.00 0.00 2.32
6621 6837 6.603201 TGAATCCCATAAACTGACCTCAAATC 59.397 38.462 0.00 0.00 0.00 2.17
6622 6838 4.513442 TCCCATAAACTGACCTCAAATCG 58.487 43.478 0.00 0.00 0.00 3.34
6623 6839 4.224147 TCCCATAAACTGACCTCAAATCGA 59.776 41.667 0.00 0.00 0.00 3.59
6624 6840 4.572389 CCCATAAACTGACCTCAAATCGAG 59.428 45.833 0.00 0.00 41.89 4.04
6634 6850 2.898705 CTCAAATCGAGGAAGGACTGG 58.101 52.381 0.00 0.00 38.18 4.00
6635 6851 1.555075 TCAAATCGAGGAAGGACTGGG 59.445 52.381 0.00 0.00 0.00 4.45
6636 6852 0.912486 AAATCGAGGAAGGACTGGGG 59.088 55.000 0.00 0.00 0.00 4.96
6637 6853 0.983378 AATCGAGGAAGGACTGGGGG 60.983 60.000 0.00 0.00 0.00 5.40
6638 6854 1.886730 ATCGAGGAAGGACTGGGGGA 61.887 60.000 0.00 0.00 0.00 4.81
6639 6855 1.612442 CGAGGAAGGACTGGGGGAA 60.612 63.158 0.00 0.00 0.00 3.97
6640 6856 0.983378 CGAGGAAGGACTGGGGGAAT 60.983 60.000 0.00 0.00 0.00 3.01
6641 6857 1.299939 GAGGAAGGACTGGGGGAATT 58.700 55.000 0.00 0.00 0.00 2.17
6642 6858 1.641192 GAGGAAGGACTGGGGGAATTT 59.359 52.381 0.00 0.00 0.00 1.82
6643 6859 1.359130 AGGAAGGACTGGGGGAATTTG 59.641 52.381 0.00 0.00 0.00 2.32
6644 6860 1.619704 GGAAGGACTGGGGGAATTTGG 60.620 57.143 0.00 0.00 0.00 3.28
6645 6861 1.357761 GAAGGACTGGGGGAATTTGGA 59.642 52.381 0.00 0.00 0.00 3.53
6646 6862 0.704664 AGGACTGGGGGAATTTGGAC 59.295 55.000 0.00 0.00 0.00 4.02
6647 6863 0.679960 GGACTGGGGGAATTTGGACG 60.680 60.000 0.00 0.00 0.00 4.79
6648 6864 0.037734 GACTGGGGGAATTTGGACGT 59.962 55.000 0.00 0.00 0.00 4.34
6649 6865 1.279846 GACTGGGGGAATTTGGACGTA 59.720 52.381 0.00 0.00 0.00 3.57
6650 6866 1.003928 ACTGGGGGAATTTGGACGTAC 59.996 52.381 0.00 0.00 0.00 3.67
6651 6867 0.036199 TGGGGGAATTTGGACGTACG 60.036 55.000 15.01 15.01 0.00 3.67
6652 6868 0.745486 GGGGGAATTTGGACGTACGG 60.745 60.000 21.06 1.43 0.00 4.02
6653 6869 1.371337 GGGGAATTTGGACGTACGGC 61.371 60.000 21.06 17.96 0.00 5.68
6654 6870 0.674269 GGGAATTTGGACGTACGGCA 60.674 55.000 24.89 6.28 0.00 5.69
6655 6871 1.375551 GGAATTTGGACGTACGGCAT 58.624 50.000 24.89 4.81 0.00 4.40
6656 6872 1.063469 GGAATTTGGACGTACGGCATG 59.937 52.381 24.89 0.00 0.00 4.06
6657 6873 1.063469 GAATTTGGACGTACGGCATGG 59.937 52.381 24.89 0.00 0.00 3.66
6658 6874 0.035820 ATTTGGACGTACGGCATGGT 60.036 50.000 24.89 2.67 0.00 3.55
6659 6875 0.951525 TTTGGACGTACGGCATGGTG 60.952 55.000 24.89 0.00 0.00 4.17
6660 6876 2.510691 GGACGTACGGCATGGTGG 60.511 66.667 24.89 0.00 0.00 4.61
6661 6877 2.574929 GACGTACGGCATGGTGGA 59.425 61.111 18.23 0.00 0.00 4.02
6662 6878 1.518572 GACGTACGGCATGGTGGAG 60.519 63.158 18.23 0.00 0.00 3.86
6663 6879 2.221906 GACGTACGGCATGGTGGAGT 62.222 60.000 18.23 0.00 0.00 3.85
6664 6880 1.518572 CGTACGGCATGGTGGAGTC 60.519 63.158 7.57 0.00 0.00 3.36
6665 6881 1.898154 GTACGGCATGGTGGAGTCT 59.102 57.895 0.00 0.00 0.00 3.24
6666 6882 0.460284 GTACGGCATGGTGGAGTCTG 60.460 60.000 0.00 0.00 0.00 3.51
6667 6883 1.613317 TACGGCATGGTGGAGTCTGG 61.613 60.000 0.00 0.00 0.00 3.86
6668 6884 2.659063 CGGCATGGTGGAGTCTGGA 61.659 63.158 0.00 0.00 0.00 3.86
6669 6885 1.078143 GGCATGGTGGAGTCTGGAC 60.078 63.158 0.00 0.00 0.00 4.02
6670 6886 1.557269 GGCATGGTGGAGTCTGGACT 61.557 60.000 2.62 2.62 45.84 3.85
6671 6887 0.326264 GCATGGTGGAGTCTGGACTT 59.674 55.000 4.67 0.00 42.66 3.01
6672 6888 1.677217 GCATGGTGGAGTCTGGACTTC 60.677 57.143 4.67 3.43 42.66 3.01
6673 6889 1.065854 CATGGTGGAGTCTGGACTTCC 60.066 57.143 6.58 8.73 42.66 3.46
6674 6890 1.185618 TGGTGGAGTCTGGACTTCCG 61.186 60.000 6.58 0.00 42.66 4.30
6675 6891 0.898789 GGTGGAGTCTGGACTTCCGA 60.899 60.000 6.58 0.00 42.66 4.55
6676 6892 0.244178 GTGGAGTCTGGACTTCCGAC 59.756 60.000 6.58 10.48 42.66 4.79
6677 6893 1.241990 TGGAGTCTGGACTTCCGACG 61.242 60.000 6.58 0.00 42.66 5.12
6678 6894 1.242665 GGAGTCTGGACTTCCGACGT 61.243 60.000 4.67 0.00 42.66 4.34
6679 6895 0.109689 GAGTCTGGACTTCCGACGTG 60.110 60.000 0.00 0.00 42.66 4.49
6680 6896 1.733399 GTCTGGACTTCCGACGTGC 60.733 63.158 0.00 0.00 39.43 5.34
6681 6897 2.432628 CTGGACTTCCGACGTGCC 60.433 66.667 0.00 0.00 39.43 5.01
6682 6898 3.220999 CTGGACTTCCGACGTGCCA 62.221 63.158 0.00 0.00 39.43 4.92
6683 6899 2.737376 GGACTTCCGACGTGCCAC 60.737 66.667 0.00 0.00 0.00 5.01
6684 6900 2.737376 GACTTCCGACGTGCCACC 60.737 66.667 0.00 0.00 0.00 4.61
6685 6901 3.509137 GACTTCCGACGTGCCACCA 62.509 63.158 0.00 0.00 0.00 4.17
6686 6902 3.041940 CTTCCGACGTGCCACCAC 61.042 66.667 0.00 0.00 38.62 4.16
6694 6910 3.821995 GTGCCACCACGTCAAACT 58.178 55.556 0.00 0.00 31.34 2.66
6695 6911 1.647084 GTGCCACCACGTCAAACTC 59.353 57.895 0.00 0.00 31.34 3.01
6696 6912 1.525077 TGCCACCACGTCAAACTCC 60.525 57.895 0.00 0.00 0.00 3.85
6697 6913 2.604174 GCCACCACGTCAAACTCCG 61.604 63.158 0.00 0.00 0.00 4.63
6698 6914 1.068417 CCACCACGTCAAACTCCGA 59.932 57.895 0.00 0.00 0.00 4.55
6699 6915 1.219522 CCACCACGTCAAACTCCGAC 61.220 60.000 0.00 0.00 0.00 4.79
6700 6916 0.528901 CACCACGTCAAACTCCGACA 60.529 55.000 0.00 0.00 32.72 4.35
6701 6917 0.529119 ACCACGTCAAACTCCGACAC 60.529 55.000 0.00 0.00 32.72 3.67
6702 6918 1.219522 CCACGTCAAACTCCGACACC 61.220 60.000 0.00 0.00 32.72 4.16
6703 6919 1.068585 ACGTCAAACTCCGACACCC 59.931 57.895 0.00 0.00 32.72 4.61
6704 6920 1.666872 CGTCAAACTCCGACACCCC 60.667 63.158 0.00 0.00 32.72 4.95
6705 6921 1.666872 GTCAAACTCCGACACCCCG 60.667 63.158 0.00 0.00 33.43 5.73
6706 6922 1.833492 TCAAACTCCGACACCCCGA 60.833 57.895 0.00 0.00 0.00 5.14
6707 6923 1.070105 CAAACTCCGACACCCCGAA 59.930 57.895 0.00 0.00 0.00 4.30
6708 6924 1.070275 AAACTCCGACACCCCGAAC 59.930 57.895 0.00 0.00 0.00 3.95
6709 6925 2.387476 AAACTCCGACACCCCGAACC 62.387 60.000 0.00 0.00 0.00 3.62
6710 6926 4.078516 CTCCGACACCCCGAACCC 62.079 72.222 0.00 0.00 0.00 4.11
6711 6927 4.938074 TCCGACACCCCGAACCCA 62.938 66.667 0.00 0.00 0.00 4.51
6712 6928 4.692475 CCGACACCCCGAACCCAC 62.692 72.222 0.00 0.00 0.00 4.61
6713 6929 4.692475 CGACACCCCGAACCCACC 62.692 72.222 0.00 0.00 0.00 4.61
6714 6930 4.340246 GACACCCCGAACCCACCC 62.340 72.222 0.00 0.00 0.00 4.61
6718 6934 3.904617 CCCCGAACCCACCCCAAA 61.905 66.667 0.00 0.00 0.00 3.28
6719 6935 2.198980 CCCGAACCCACCCCAAAA 59.801 61.111 0.00 0.00 0.00 2.44
6720 6936 2.204461 CCCGAACCCACCCCAAAAC 61.204 63.158 0.00 0.00 0.00 2.43
6721 6937 2.204461 CCGAACCCACCCCAAAACC 61.204 63.158 0.00 0.00 0.00 3.27
6722 6938 1.152631 CGAACCCACCCCAAAACCT 60.153 57.895 0.00 0.00 0.00 3.50
6723 6939 1.176619 CGAACCCACCCCAAAACCTC 61.177 60.000 0.00 0.00 0.00 3.85
6724 6940 0.187606 GAACCCACCCCAAAACCTCT 59.812 55.000 0.00 0.00 0.00 3.69
6725 6941 0.639943 AACCCACCCCAAAACCTCTT 59.360 50.000 0.00 0.00 0.00 2.85
6726 6942 0.639943 ACCCACCCCAAAACCTCTTT 59.360 50.000 0.00 0.00 0.00 2.52
6727 6943 1.338107 CCCACCCCAAAACCTCTTTC 58.662 55.000 0.00 0.00 0.00 2.62
6728 6944 1.412361 CCCACCCCAAAACCTCTTTCA 60.412 52.381 0.00 0.00 0.00 2.69
6729 6945 1.963515 CCACCCCAAAACCTCTTTCAG 59.036 52.381 0.00 0.00 0.00 3.02
6730 6946 1.341209 CACCCCAAAACCTCTTTCAGC 59.659 52.381 0.00 0.00 0.00 4.26
6731 6947 1.217942 ACCCCAAAACCTCTTTCAGCT 59.782 47.619 0.00 0.00 0.00 4.24
6732 6948 1.889170 CCCCAAAACCTCTTTCAGCTC 59.111 52.381 0.00 0.00 0.00 4.09
6733 6949 1.537202 CCCAAAACCTCTTTCAGCTCG 59.463 52.381 0.00 0.00 0.00 5.03
6734 6950 2.494059 CCAAAACCTCTTTCAGCTCGA 58.506 47.619 0.00 0.00 0.00 4.04
6735 6951 2.481952 CCAAAACCTCTTTCAGCTCGAG 59.518 50.000 8.45 8.45 0.00 4.04
6736 6952 3.393800 CAAAACCTCTTTCAGCTCGAGA 58.606 45.455 18.75 0.00 0.00 4.04
6737 6953 3.753294 AAACCTCTTTCAGCTCGAGAA 57.247 42.857 18.75 0.00 0.00 2.87
6738 6954 2.734276 ACCTCTTTCAGCTCGAGAAC 57.266 50.000 18.75 0.00 0.00 3.01
6739 6955 2.243810 ACCTCTTTCAGCTCGAGAACT 58.756 47.619 18.75 0.83 0.00 3.01
6740 6956 2.230266 ACCTCTTTCAGCTCGAGAACTC 59.770 50.000 18.75 0.00 0.00 3.01
6741 6957 2.491693 CCTCTTTCAGCTCGAGAACTCT 59.508 50.000 18.75 0.00 0.00 3.24
6742 6958 3.056891 CCTCTTTCAGCTCGAGAACTCTT 60.057 47.826 18.75 0.00 0.00 2.85
6743 6959 4.165779 CTCTTTCAGCTCGAGAACTCTTC 58.834 47.826 18.75 0.00 0.00 2.87
6744 6960 2.620779 TTCAGCTCGAGAACTCTTCG 57.379 50.000 18.75 0.00 34.02 3.79
6745 6961 0.805614 TCAGCTCGAGAACTCTTCGG 59.194 55.000 18.75 0.00 34.02 4.30
6746 6962 0.179150 CAGCTCGAGAACTCTTCGGG 60.179 60.000 18.75 0.00 34.02 5.14
6747 6963 1.517475 GCTCGAGAACTCTTCGGGC 60.517 63.158 18.75 3.61 46.09 6.13
6748 6964 1.139947 CTCGAGAACTCTTCGGGCC 59.860 63.158 6.58 0.00 34.02 5.80
6749 6965 1.595993 CTCGAGAACTCTTCGGGCCA 61.596 60.000 6.58 0.00 34.02 5.36
6750 6966 1.446272 CGAGAACTCTTCGGGCCAC 60.446 63.158 4.39 0.00 34.02 5.01
6751 6967 1.671742 GAGAACTCTTCGGGCCACA 59.328 57.895 4.39 0.00 34.02 4.17
6752 6968 0.670854 GAGAACTCTTCGGGCCACAC 60.671 60.000 4.39 0.00 34.02 3.82
6753 6969 1.070786 GAACTCTTCGGGCCACACA 59.929 57.895 4.39 0.00 0.00 3.72
6754 6970 0.321653 GAACTCTTCGGGCCACACAT 60.322 55.000 4.39 0.00 0.00 3.21
6755 6971 0.110486 AACTCTTCGGGCCACACATT 59.890 50.000 4.39 0.00 0.00 2.71
6756 6972 0.321653 ACTCTTCGGGCCACACATTC 60.322 55.000 4.39 0.00 0.00 2.67
6757 6973 0.321564 CTCTTCGGGCCACACATTCA 60.322 55.000 4.39 0.00 0.00 2.57
6758 6974 0.605319 TCTTCGGGCCACACATTCAC 60.605 55.000 4.39 0.00 0.00 3.18
6759 6975 0.606401 CTTCGGGCCACACATTCACT 60.606 55.000 4.39 0.00 0.00 3.41
6760 6976 0.605319 TTCGGGCCACACATTCACTC 60.605 55.000 4.39 0.00 0.00 3.51
6761 6977 2.040544 CGGGCCACACATTCACTCC 61.041 63.158 4.39 0.00 0.00 3.85
6762 6978 2.040544 GGGCCACACATTCACTCCG 61.041 63.158 4.39 0.00 0.00 4.63
6763 6979 2.040544 GGCCACACATTCACTCCGG 61.041 63.158 0.00 0.00 0.00 5.14
6764 6980 2.690778 GCCACACATTCACTCCGGC 61.691 63.158 0.00 0.00 0.00 6.13
6765 6981 1.003355 CCACACATTCACTCCGGCT 60.003 57.895 0.00 0.00 0.00 5.52
6766 6982 0.249120 CCACACATTCACTCCGGCTA 59.751 55.000 0.00 0.00 0.00 3.93
6767 6983 1.645034 CACACATTCACTCCGGCTAG 58.355 55.000 0.00 0.00 0.00 3.42
6768 6984 1.204704 CACACATTCACTCCGGCTAGA 59.795 52.381 0.00 0.00 0.00 2.43
6769 6985 2.111384 ACACATTCACTCCGGCTAGAT 58.889 47.619 0.00 0.00 0.00 1.98
6770 6986 2.101582 ACACATTCACTCCGGCTAGATC 59.898 50.000 0.00 0.00 0.00 2.75
6773 6989 0.395311 TTCACTCCGGCTAGATCGGT 60.395 55.000 19.66 4.22 46.82 4.69
6778 6994 2.728817 CGGCTAGATCGGTCACCC 59.271 66.667 0.00 0.00 0.00 4.61
6779 6995 2.125326 CGGCTAGATCGGTCACCCA 61.125 63.158 0.00 0.00 0.00 4.51
6780 6996 1.464376 CGGCTAGATCGGTCACCCAT 61.464 60.000 0.00 0.00 0.00 4.00
6788 7004 2.040544 CGGTCACCCATCAACCTGC 61.041 63.158 0.00 0.00 0.00 4.85
6798 7014 2.159156 CCATCAACCTGCATTCATGGTG 60.159 50.000 0.00 0.00 33.89 4.17
6802 7018 1.252904 ACCTGCATTCATGGTGGCAC 61.253 55.000 9.70 9.70 32.16 5.01
6805 7021 2.491152 CATTCATGGTGGCACGGC 59.509 61.111 12.17 0.00 0.00 5.68
6823 7039 2.205911 GGCGATTGAGAAGCTTACTCC 58.794 52.381 17.69 0.09 33.95 3.85
6842 7058 1.980772 GGCTGCCCACATTGAAGCT 60.981 57.895 7.66 0.00 34.29 3.74
6845 7061 0.169672 CTGCCCACATTGAAGCTTCG 59.830 55.000 21.11 9.89 0.00 3.79
6855 7157 1.891919 GAAGCTTCGCCACCACACA 60.892 57.895 11.40 0.00 0.00 3.72
6884 7186 3.536956 AAGTCTGACACCGAAAAGTGA 57.463 42.857 10.88 0.00 40.34 3.41
6891 7193 1.674322 ACCGAAAAGTGATGGCCGG 60.674 57.895 0.00 0.00 42.30 6.13
6919 7222 4.768968 ACTATGGATCCAATTTGCATAGCC 59.231 41.667 20.67 6.75 44.65 3.93
6941 7244 1.214062 CACGGTCTCTGGAGCTGTC 59.786 63.158 0.00 0.00 37.77 3.51
7007 7310 3.657956 GGATGACGAGGAGCAGAAG 57.342 57.895 0.00 0.00 0.00 2.85
7020 7323 3.402186 CAGAAGTTGTCCCTGCACA 57.598 52.632 0.00 0.00 0.00 4.57
7021 7324 0.947244 CAGAAGTTGTCCCTGCACAC 59.053 55.000 0.00 0.00 0.00 3.82
7022 7325 0.179018 AGAAGTTGTCCCTGCACACC 60.179 55.000 0.00 0.00 0.00 4.16
7023 7326 1.507141 GAAGTTGTCCCTGCACACCG 61.507 60.000 0.00 0.00 0.00 4.94
7024 7327 3.660111 GTTGTCCCTGCACACCGC 61.660 66.667 0.00 0.00 42.89 5.68
7025 7328 4.947147 TTGTCCCTGCACACCGCC 62.947 66.667 0.00 0.00 41.33 6.13
7036 7339 2.434884 CACCGCCACAGCCACTAG 60.435 66.667 0.00 0.00 34.57 2.57
7041 7344 2.990479 CCACAGCCACTAGGGACC 59.010 66.667 0.00 0.00 40.01 4.46
7067 7370 1.517257 CACGCGACAGGTGGAGATC 60.517 63.158 15.93 0.00 0.00 2.75
7068 7371 2.278206 CGCGACAGGTGGAGATCG 60.278 66.667 0.00 0.00 37.63 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 1.448893 GCCGACCCAATACGAAGCA 60.449 57.895 0.00 0.00 0.00 3.91
91 92 6.386050 CCTTGGTTCTCCCTTTACCTAATCTA 59.614 42.308 0.00 0.00 33.05 1.98
100 101 4.799715 TCAAACCTTGGTTCTCCCTTTA 57.200 40.909 5.43 0.00 0.00 1.85
127 128 1.819229 CGGAGTGGTAGCAGCATCT 59.181 57.895 0.00 0.00 0.00 2.90
179 180 6.374333 GGTTTGAAATAGCCTCAAGTATGACA 59.626 38.462 0.00 0.00 34.41 3.58
552 646 9.329913 CGAACGAGTATTTGAAAAATCTTGAAT 57.670 29.630 0.00 0.00 0.00 2.57
741 851 2.213499 CACTGCCTCGTTTTTCTCTGT 58.787 47.619 0.00 0.00 0.00 3.41
742 852 2.213499 ACACTGCCTCGTTTTTCTCTG 58.787 47.619 0.00 0.00 0.00 3.35
743 853 2.622064 ACACTGCCTCGTTTTTCTCT 57.378 45.000 0.00 0.00 0.00 3.10
744 854 3.391049 ACTACACTGCCTCGTTTTTCTC 58.609 45.455 0.00 0.00 0.00 2.87
746 856 3.431233 GGTACTACACTGCCTCGTTTTTC 59.569 47.826 0.00 0.00 0.00 2.29
800 911 0.667792 AAGCTTCCGACTCGCTGAAC 60.668 55.000 0.00 0.00 33.64 3.18
905 1024 2.229792 TGCTCCAGGCTGTAGTTTTTG 58.770 47.619 14.43 0.00 42.39 2.44
912 1031 1.757118 GTACTGATGCTCCAGGCTGTA 59.243 52.381 14.43 0.00 42.39 2.74
913 1032 0.539051 GTACTGATGCTCCAGGCTGT 59.461 55.000 14.43 0.00 42.39 4.40
914 1033 0.829333 AGTACTGATGCTCCAGGCTG 59.171 55.000 7.75 7.75 42.39 4.85
915 1034 1.118838 GAGTACTGATGCTCCAGGCT 58.881 55.000 0.00 7.56 42.39 4.58
916 1035 1.118838 AGAGTACTGATGCTCCAGGC 58.881 55.000 0.00 3.77 38.27 4.85
917 1036 2.382882 TCAGAGTACTGATGCTCCAGG 58.617 52.381 0.00 0.00 46.55 4.45
976 1126 1.384989 TTGGATCGCGGAGAGGAGTC 61.385 60.000 6.13 0.00 0.00 3.36
1138 1288 2.124653 ATCTCGGCCTCGACGTCT 60.125 61.111 14.70 0.00 40.88 4.18
1349 1499 4.227538 CGTCAACTAGAGAAGCTCGAAAA 58.772 43.478 0.00 0.00 35.36 2.29
1499 1649 4.202161 CCAGCGTAATCTCTAACCATGTCT 60.202 45.833 0.00 0.00 0.00 3.41
1680 1830 1.423395 CGCTGGTCTCAACTCTCAAC 58.577 55.000 0.00 0.00 0.00 3.18
1681 1831 0.318441 CCGCTGGTCTCAACTCTCAA 59.682 55.000 0.00 0.00 0.00 3.02
1682 1832 1.967535 CCGCTGGTCTCAACTCTCA 59.032 57.895 0.00 0.00 0.00 3.27
1683 1833 1.446966 GCCGCTGGTCTCAACTCTC 60.447 63.158 0.00 0.00 0.00 3.20
1684 1834 1.882989 GAGCCGCTGGTCTCAACTCT 61.883 60.000 0.00 0.00 36.07 3.24
1685 1835 1.446966 GAGCCGCTGGTCTCAACTC 60.447 63.158 0.00 0.00 36.07 3.01
1686 1836 1.548357 ATGAGCCGCTGGTCTCAACT 61.548 55.000 17.80 7.18 38.54 3.16
1687 1837 0.674895 AATGAGCCGCTGGTCTCAAC 60.675 55.000 17.80 0.00 38.54 3.18
1688 1838 0.674581 CAATGAGCCGCTGGTCTCAA 60.675 55.000 17.80 0.00 38.54 3.02
1689 1839 1.078918 CAATGAGCCGCTGGTCTCA 60.079 57.895 16.91 16.91 39.05 3.27
1690 1840 2.467826 GCAATGAGCCGCTGGTCTC 61.468 63.158 8.80 9.53 39.75 3.36
1710 1860 5.801444 CACCAAACACTCGTACGACATATTA 59.199 40.000 15.28 0.00 0.00 0.98
1723 1873 1.880027 GTCCCATCACACCAAACACTC 59.120 52.381 0.00 0.00 0.00 3.51
1728 1878 3.137544 ACACTAAGTCCCATCACACCAAA 59.862 43.478 0.00 0.00 0.00 3.28
1883 2033 3.747266 GAGCTGCCAGATCCATGC 58.253 61.111 0.00 0.00 0.00 4.06
1938 2088 1.886542 CTACAGGGACAAAAGGCAACC 59.113 52.381 0.00 0.00 37.17 3.77
2005 2155 9.846248 GTGAATAAAGAATCAGCAACTAACAAT 57.154 29.630 0.00 0.00 0.00 2.71
2007 2157 7.386573 TCGTGAATAAAGAATCAGCAACTAACA 59.613 33.333 0.00 0.00 0.00 2.41
2008 2158 7.739295 TCGTGAATAAAGAATCAGCAACTAAC 58.261 34.615 0.00 0.00 0.00 2.34
2010 2160 6.036083 GCTCGTGAATAAAGAATCAGCAACTA 59.964 38.462 0.00 0.00 0.00 2.24
2012 2162 5.024555 GCTCGTGAATAAAGAATCAGCAAC 58.975 41.667 0.00 0.00 0.00 4.17
2013 2163 4.094887 GGCTCGTGAATAAAGAATCAGCAA 59.905 41.667 0.00 0.00 0.00 3.91
2014 2164 3.623060 GGCTCGTGAATAAAGAATCAGCA 59.377 43.478 0.00 0.00 0.00 4.41
2015 2165 3.623060 TGGCTCGTGAATAAAGAATCAGC 59.377 43.478 0.00 0.00 0.00 4.26
2016 2166 4.631377 TGTGGCTCGTGAATAAAGAATCAG 59.369 41.667 0.00 0.00 0.00 2.90
2017 2167 4.574892 TGTGGCTCGTGAATAAAGAATCA 58.425 39.130 0.00 0.00 0.00 2.57
2018 2168 4.631813 ACTGTGGCTCGTGAATAAAGAATC 59.368 41.667 0.00 0.00 0.00 2.52
2019 2169 4.579869 ACTGTGGCTCGTGAATAAAGAAT 58.420 39.130 0.00 0.00 0.00 2.40
2090 2240 3.278574 TGTTCTGGTTTTGACACTCCTG 58.721 45.455 0.00 0.00 0.00 3.86
2153 2303 4.037208 CCACTGCCTAAGAATTAAGCATGG 59.963 45.833 0.00 0.00 45.93 3.66
2270 2421 0.438830 GAACTCGGTGCAATCGTCAC 59.561 55.000 9.95 0.00 0.00 3.67
2357 2509 1.807814 AGTACCTCCCTGCCATAAGG 58.192 55.000 0.00 0.00 37.05 2.69
2529 2681 3.021695 ACTAGCAGTAACGCACCATCTA 58.978 45.455 0.00 0.00 0.00 1.98
2549 2703 3.132467 ACTGCCTCGGTTAAGGAGATTAC 59.868 47.826 5.28 0.00 38.87 1.89
2580 2734 7.681679 TGTGGTATCAATCCTGTAAAACAGTA 58.318 34.615 6.33 0.00 44.50 2.74
2687 2843 8.918202 AAATGTGAGAATGGTAGACTAACAAA 57.082 30.769 3.88 0.00 30.21 2.83
2688 2844 8.783093 CAAAATGTGAGAATGGTAGACTAACAA 58.217 33.333 3.88 0.00 30.21 2.83
2689 2845 7.390440 CCAAAATGTGAGAATGGTAGACTAACA 59.610 37.037 1.90 1.90 30.85 2.41
2690 2846 7.390718 ACCAAAATGTGAGAATGGTAGACTAAC 59.609 37.037 0.00 0.00 42.38 2.34
2691 2847 7.458397 ACCAAAATGTGAGAATGGTAGACTAA 58.542 34.615 0.00 0.00 42.38 2.24
2793 2949 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2808 2964 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2809 2965 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2815 2971 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2816 2972 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2817 2973 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2818 2974 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2819 2975 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2820 2976 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
2821 2977 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
2822 2978 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
2823 2979 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2825 2981 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2826 2982 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2827 2983 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2831 2987 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2832 2988 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2833 2989 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2834 2990 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2835 2991 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2840 2996 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2843 2999 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2844 3000 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2845 3001 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2875 3031 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
2877 3033 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
2878 3034 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
2879 3035 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
2880 3036 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
2881 3037 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
2882 3038 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
2883 3039 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
2884 3040 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
2885 3041 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
2886 3042 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
2902 3058 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
2903 3059 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
2920 3076 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
2921 3077 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
2922 3078 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2923 3079 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2924 3080 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2925 3081 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2926 3082 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2927 3083 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2928 3084 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2929 3085 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
2930 3086 8.759782 CATAATACTCCCTCCGTTCCTAAATAT 58.240 37.037 0.00 0.00 0.00 1.28
2931 3087 7.731688 ACATAATACTCCCTCCGTTCCTAAATA 59.268 37.037 0.00 0.00 0.00 1.40
2932 3088 6.557633 ACATAATACTCCCTCCGTTCCTAAAT 59.442 38.462 0.00 0.00 0.00 1.40
2933 3089 5.901276 ACATAATACTCCCTCCGTTCCTAAA 59.099 40.000 0.00 0.00 0.00 1.85
2934 3090 5.461327 ACATAATACTCCCTCCGTTCCTAA 58.539 41.667 0.00 0.00 0.00 2.69
2935 3091 5.070823 ACATAATACTCCCTCCGTTCCTA 57.929 43.478 0.00 0.00 0.00 2.94
2936 3092 3.924922 ACATAATACTCCCTCCGTTCCT 58.075 45.455 0.00 0.00 0.00 3.36
2937 3093 4.684484 AACATAATACTCCCTCCGTTCC 57.316 45.455 0.00 0.00 0.00 3.62
2938 3094 5.695363 GCTAAACATAATACTCCCTCCGTTC 59.305 44.000 0.00 0.00 0.00 3.95
2939 3095 5.129815 TGCTAAACATAATACTCCCTCCGTT 59.870 40.000 0.00 0.00 0.00 4.44
2999 3155 1.064240 CAGTTTTTATACCCGCCCCCT 60.064 52.381 0.00 0.00 0.00 4.79
3067 3224 9.612620 CTTGATAACCACAGATTGTTAACTTTC 57.387 33.333 7.22 3.90 31.29 2.62
3103 3260 7.553881 AATAACCCAATTACTTGACATCTCG 57.446 36.000 0.00 0.00 34.04 4.04
3105 3262 9.354673 CCATAATAACCCAATTACTTGACATCT 57.645 33.333 0.00 0.00 34.04 2.90
3109 3266 8.288689 ACACCATAATAACCCAATTACTTGAC 57.711 34.615 0.00 0.00 34.04 3.18
3255 3412 2.567615 GGGAAGGACTCAGCTCAAACTA 59.432 50.000 0.00 0.00 0.00 2.24
3295 3452 2.282603 TTAGCGGTGGTTTGGGGC 60.283 61.111 0.00 0.00 0.00 5.80
3446 3604 9.824534 CCACAAAAGGCAAAAATAAAATACATC 57.175 29.630 0.00 0.00 0.00 3.06
3476 3635 3.706594 TGAATGGTGTGCTTGGGTTTAAA 59.293 39.130 0.00 0.00 0.00 1.52
3508 3667 8.703378 AGAATGACAAAGAAAGAAAGGAGAAT 57.297 30.769 0.00 0.00 0.00 2.40
3509 3668 8.525290 AAGAATGACAAAGAAAGAAAGGAGAA 57.475 30.769 0.00 0.00 0.00 2.87
3511 3670 8.628280 AGAAAGAATGACAAAGAAAGAAAGGAG 58.372 33.333 0.00 0.00 0.00 3.69
3512 3671 8.525290 AGAAAGAATGACAAAGAAAGAAAGGA 57.475 30.769 0.00 0.00 0.00 3.36
3513 3672 9.591792 AAAGAAAGAATGACAAAGAAAGAAAGG 57.408 29.630 0.00 0.00 0.00 3.11
3555 3715 5.973651 AAAGCAAAGTAAAGCAAAGAAGC 57.026 34.783 0.00 0.00 0.00 3.86
3719 3879 7.833682 TCAAGTCAATTAGCTCCCAATCAATTA 59.166 33.333 0.00 0.00 0.00 1.40
3754 3914 8.734386 CAGAGTTAAGTCAATTAGCTTCCATTT 58.266 33.333 12.77 0.00 35.30 2.32
3828 3988 6.212888 AGAGCAAAACAATGAAACTGTTCT 57.787 33.333 0.00 0.00 34.60 3.01
3829 3989 6.753744 AGAAGAGCAAAACAATGAAACTGTTC 59.246 34.615 0.00 0.00 0.00 3.18
3830 3990 6.633856 AGAAGAGCAAAACAATGAAACTGTT 58.366 32.000 0.00 0.00 0.00 3.16
4121 4282 0.890683 CATGGTGGGTTTTCTGGAGC 59.109 55.000 0.00 0.00 0.00 4.70
4160 4321 9.816354 ACTGAAGCTAAAAGATCTTCTATCTTC 57.184 33.333 19.01 19.01 37.38 2.87
4357 4518 2.042464 TCACAGTCTCTGCTGGTTTCT 58.958 47.619 0.00 0.00 40.59 2.52
4364 4525 1.356124 ATGGGTTCACAGTCTCTGCT 58.644 50.000 0.00 0.00 34.37 4.24
4481 4642 2.125673 ACGTCGTGCCCATGTAGC 60.126 61.111 0.00 0.00 0.00 3.58
4497 4658 1.535462 CTGACGTGGTTGATTTCCCAC 59.465 52.381 0.00 0.00 46.20 4.61
4517 4678 3.584848 ACTCCTCTATCACCCATAATGGC 59.415 47.826 0.00 0.00 35.79 4.40
4814 4975 3.932580 CTGAACCGCCGTGCTGCTA 62.933 63.158 0.00 0.00 0.00 3.49
4828 4989 0.318441 CCACGAGACTCTTGCCTGAA 59.682 55.000 3.44 0.00 0.00 3.02
4844 5005 4.072131 TCAGATCAACAAGGTTAAGCCAC 58.928 43.478 0.00 0.00 40.61 5.01
5090 5251 3.930634 TCTGATCCATACTCGAGCATG 57.069 47.619 17.31 17.31 0.00 4.06
5096 5257 3.005155 TGCAGTCATCTGATCCATACTCG 59.995 47.826 0.00 0.00 43.76 4.18
5135 5296 1.993956 AGCCATGTTTAACAGCACCA 58.006 45.000 11.02 0.00 0.00 4.17
5156 5317 6.148480 GCCTAGCACGATCAATTATCAAAGAT 59.852 38.462 0.00 0.00 33.87 2.40
5216 5377 2.205022 TGGGTGAAGCAGAAATCCTG 57.795 50.000 0.00 0.00 45.67 3.86
5351 5512 3.128589 GTGCCAATGTGGATTCAACGTAT 59.871 43.478 0.00 0.00 40.96 3.06
5357 5518 2.234168 CCATTGTGCCAATGTGGATTCA 59.766 45.455 19.84 0.00 40.96 2.57
5384 5545 7.587037 TTCCATTTCAAGAAAGAACACATCT 57.413 32.000 1.48 0.00 41.32 2.90
5415 5576 1.271597 CCCTTCTTCTCCAACCACAGG 60.272 57.143 0.00 0.00 0.00 4.00
5438 5599 7.712639 TGATTTATCTCTTGCTGGAATACACTC 59.287 37.037 0.00 0.00 0.00 3.51
5439 5600 7.568349 TGATTTATCTCTTGCTGGAATACACT 58.432 34.615 0.00 0.00 0.00 3.55
5474 5635 8.733092 TCTTATCTACCCATTCTGATCTGAAT 57.267 34.615 19.02 19.02 37.16 2.57
5504 5665 4.473196 TCAAATGCCCTAAGGATGACAGTA 59.527 41.667 0.00 0.00 33.47 2.74
5507 5668 4.209538 CATCAAATGCCCTAAGGATGACA 58.790 43.478 0.00 0.00 35.36 3.58
5522 5683 1.091771 CACGGGAGCGAGCATCAAAT 61.092 55.000 0.00 0.00 33.17 2.32
5534 5695 5.011090 TGTTCTTCAGATAATCACGGGAG 57.989 43.478 0.00 0.00 0.00 4.30
5540 5701 6.053632 TGCCTCTTGTTCTTCAGATAATCA 57.946 37.500 0.00 0.00 0.00 2.57
5543 5704 5.240891 CACTGCCTCTTGTTCTTCAGATAA 58.759 41.667 0.00 0.00 0.00 1.75
5552 5713 1.239968 CCTGCCACTGCCTCTTGTTC 61.240 60.000 0.00 0.00 36.33 3.18
5576 5737 2.548920 GGATATGGCCGGTTCTTCTGAG 60.549 54.545 1.90 0.00 0.00 3.35
5591 5752 3.779183 ACTCTATGATGGCCCTGGATATG 59.221 47.826 0.00 0.00 0.00 1.78
5600 5761 2.549778 GCCTGAAGACTCTATGATGGCC 60.550 54.545 0.00 0.00 32.50 5.36
5644 5805 2.290323 ACATTTAGGCCGTCTTCAAGCT 60.290 45.455 0.00 0.00 0.00 3.74
5648 5809 1.003118 AGCACATTTAGGCCGTCTTCA 59.997 47.619 0.00 0.00 0.00 3.02
5654 5815 1.392589 AATCCAGCACATTTAGGCCG 58.607 50.000 0.00 0.00 0.00 6.13
5693 5854 3.164977 TCCACTCCGGTTGCCACA 61.165 61.111 0.00 0.00 35.57 4.17
5708 5869 0.595095 CTGTGAAAAGCAGCTGGTCC 59.405 55.000 20.46 11.93 0.00 4.46
5729 5890 0.602562 TTGGGCTTCCAGCGAAAATG 59.397 50.000 0.00 0.00 43.62 2.32
5794 5955 3.045688 GCTTGGAAAACAGCGAAAAGAG 58.954 45.455 0.00 0.00 0.00 2.85
5801 5962 4.950744 CAGGCTTGGAAAACAGCG 57.049 55.556 0.00 0.00 0.00 5.18
5859 6020 9.967346 CTCATCAATCTTCAGCAATTTCAATAT 57.033 29.630 0.00 0.00 0.00 1.28
5860 6021 9.181061 TCTCATCAATCTTCAGCAATTTCAATA 57.819 29.630 0.00 0.00 0.00 1.90
5942 6103 1.148157 CGGCTGTCAGATGCCTAACG 61.148 60.000 3.32 0.00 46.42 3.18
6036 6198 7.804843 AGGCAATTCATTTTTGACATTCAAA 57.195 28.000 0.00 0.00 43.84 2.69
6131 6323 5.714806 CCTTATTACACCAATCAACAAGGGT 59.285 40.000 0.00 0.00 29.96 4.34
6162 6371 6.661805 TCTGTTACAAAAGGGAAAACTCACTT 59.338 34.615 0.00 0.00 34.32 3.16
6188 6397 2.857748 CCGTCAGCAAAACAGTTTTTCC 59.142 45.455 8.65 3.64 32.27 3.13
6189 6398 3.546271 GTCCGTCAGCAAAACAGTTTTTC 59.454 43.478 8.65 4.39 32.27 2.29
6190 6399 3.507786 GTCCGTCAGCAAAACAGTTTTT 58.492 40.909 8.65 0.00 35.15 1.94
6281 6494 1.590238 CTGCATCTGAACGATCGAACC 59.410 52.381 24.34 10.43 0.00 3.62
6307 6520 0.590195 AGAAAAAGCTGCTCGTGCTG 59.410 50.000 11.19 11.33 41.03 4.41
6408 6621 0.318445 CGTCGTTCAAAGTCCGTCCT 60.318 55.000 0.00 0.00 0.00 3.85
6409 6622 1.280206 CCGTCGTTCAAAGTCCGTCC 61.280 60.000 0.00 0.00 0.00 4.79
6413 6626 2.851104 CGCCGTCGTTCAAAGTCC 59.149 61.111 0.00 0.00 0.00 3.85
6422 6635 3.802418 AAAGGAAGTGCGCCGTCGT 62.802 57.895 4.18 3.01 38.14 4.34
6423 6636 3.011760 GAAAGGAAGTGCGCCGTCG 62.012 63.158 4.18 0.00 39.07 5.12
6424 6637 1.627550 GAGAAAGGAAGTGCGCCGTC 61.628 60.000 4.18 3.98 0.00 4.79
6433 6646 3.259625 AGGACCGAGAAAGAGAAAGGAAG 59.740 47.826 0.00 0.00 0.00 3.46
6436 6649 3.259625 AGAAGGACCGAGAAAGAGAAAGG 59.740 47.826 0.00 0.00 0.00 3.11
6455 6668 2.258591 GCGACGGCTGAGTGAGAA 59.741 61.111 0.00 0.00 35.83 2.87
6464 6677 4.393155 TGCATTCAGGCGACGGCT 62.393 61.111 19.41 19.41 39.66 5.52
6468 6681 1.817099 CCCTCTGCATTCAGGCGAC 60.817 63.158 0.00 0.00 40.69 5.19
6497 6710 3.376234 ACATTTGATGATCTGCGTTGGAG 59.624 43.478 0.00 0.00 0.00 3.86
6499 6712 3.770263 ACATTTGATGATCTGCGTTGG 57.230 42.857 0.00 0.00 0.00 3.77
6500 6713 6.467047 GTCTAAACATTTGATGATCTGCGTTG 59.533 38.462 0.00 0.00 0.00 4.10
6502 6715 5.065218 GGTCTAAACATTTGATGATCTGCGT 59.935 40.000 0.00 0.00 0.00 5.24
6503 6716 5.505286 GGTCTAAACATTTGATGATCTGCG 58.495 41.667 0.00 0.00 0.00 5.18
6504 6717 5.294306 TCGGTCTAAACATTTGATGATCTGC 59.706 40.000 0.00 0.00 0.00 4.26
6507 6720 6.185399 CGTTCGGTCTAAACATTTGATGATC 58.815 40.000 0.00 0.00 0.00 2.92
6508 6721 5.064707 CCGTTCGGTCTAAACATTTGATGAT 59.935 40.000 2.82 0.00 0.00 2.45
6509 6722 4.390603 CCGTTCGGTCTAAACATTTGATGA 59.609 41.667 2.82 0.00 0.00 2.92
6510 6723 4.153475 ACCGTTCGGTCTAAACATTTGATG 59.847 41.667 11.27 0.00 32.13 3.07
6511 6724 4.320870 ACCGTTCGGTCTAAACATTTGAT 58.679 39.130 11.27 0.00 32.13 2.57
6512 6725 3.731089 ACCGTTCGGTCTAAACATTTGA 58.269 40.909 11.27 0.00 32.13 2.69
6513 6726 4.477302 AACCGTTCGGTCTAAACATTTG 57.523 40.909 17.19 0.00 37.57 2.32
6514 6727 4.023792 GGAAACCGTTCGGTCTAAACATTT 60.024 41.667 17.19 5.47 37.57 2.32
6530 6746 2.225727 GGCTAAAAGTGTCTGGAAACCG 59.774 50.000 0.00 0.00 0.00 4.44
6535 6751 2.354704 CGGATGGCTAAAAGTGTCTGGA 60.355 50.000 0.00 0.00 0.00 3.86
6537 6753 2.673368 GTCGGATGGCTAAAAGTGTCTG 59.327 50.000 0.00 0.00 0.00 3.51
6538 6754 2.301870 TGTCGGATGGCTAAAAGTGTCT 59.698 45.455 0.00 0.00 0.00 3.41
6578 6794 2.582498 GCCGTCTGAACCGATCCG 60.582 66.667 0.00 0.00 0.00 4.18
6579 6795 1.519455 CAGCCGTCTGAACCGATCC 60.519 63.158 0.00 0.00 42.95 3.36
6580 6796 1.511305 TCAGCCGTCTGAACCGATC 59.489 57.895 0.00 0.00 45.69 3.69
6581 6797 3.694746 TCAGCCGTCTGAACCGAT 58.305 55.556 0.00 0.00 45.69 4.18
6587 6803 1.788229 TATGGGATTCAGCCGTCTGA 58.212 50.000 0.00 0.00 46.90 3.27
6588 6804 2.614057 GTTTATGGGATTCAGCCGTCTG 59.386 50.000 0.00 0.00 41.67 3.51
6589 6805 2.505819 AGTTTATGGGATTCAGCCGTCT 59.494 45.455 0.00 0.00 0.00 4.18
6590 6806 2.614057 CAGTTTATGGGATTCAGCCGTC 59.386 50.000 0.00 0.00 0.00 4.79
6591 6807 2.238646 TCAGTTTATGGGATTCAGCCGT 59.761 45.455 0.00 0.00 0.00 5.68
6592 6808 2.614057 GTCAGTTTATGGGATTCAGCCG 59.386 50.000 0.00 0.00 0.00 5.52
6593 6809 2.952310 GGTCAGTTTATGGGATTCAGCC 59.048 50.000 0.00 0.00 0.00 4.85
6594 6810 3.879892 GAGGTCAGTTTATGGGATTCAGC 59.120 47.826 0.00 0.00 0.00 4.26
6595 6811 5.102953 TGAGGTCAGTTTATGGGATTCAG 57.897 43.478 0.00 0.00 0.00 3.02
6596 6812 5.512942 TTGAGGTCAGTTTATGGGATTCA 57.487 39.130 0.00 0.00 0.00 2.57
6597 6813 6.238484 CGATTTGAGGTCAGTTTATGGGATTC 60.238 42.308 0.00 0.00 0.00 2.52
6598 6814 5.590259 CGATTTGAGGTCAGTTTATGGGATT 59.410 40.000 0.00 0.00 0.00 3.01
6599 6815 5.104527 TCGATTTGAGGTCAGTTTATGGGAT 60.105 40.000 0.00 0.00 0.00 3.85
6600 6816 4.224147 TCGATTTGAGGTCAGTTTATGGGA 59.776 41.667 0.00 0.00 0.00 4.37
6601 6817 4.513442 TCGATTTGAGGTCAGTTTATGGG 58.487 43.478 0.00 0.00 0.00 4.00
6602 6818 5.725110 CTCGATTTGAGGTCAGTTTATGG 57.275 43.478 0.00 0.00 41.29 2.74
6614 6830 2.419297 CCCAGTCCTTCCTCGATTTGAG 60.419 54.545 0.00 0.00 44.83 3.02
6615 6831 1.555075 CCCAGTCCTTCCTCGATTTGA 59.445 52.381 0.00 0.00 0.00 2.69
6616 6832 1.407437 CCCCAGTCCTTCCTCGATTTG 60.407 57.143 0.00 0.00 0.00 2.32
6617 6833 0.912486 CCCCAGTCCTTCCTCGATTT 59.088 55.000 0.00 0.00 0.00 2.17
6618 6834 0.983378 CCCCCAGTCCTTCCTCGATT 60.983 60.000 0.00 0.00 0.00 3.34
6619 6835 1.383248 CCCCCAGTCCTTCCTCGAT 60.383 63.158 0.00 0.00 0.00 3.59
6620 6836 2.038975 CCCCCAGTCCTTCCTCGA 59.961 66.667 0.00 0.00 0.00 4.04
6621 6837 0.983378 ATTCCCCCAGTCCTTCCTCG 60.983 60.000 0.00 0.00 0.00 4.63
6622 6838 1.299939 AATTCCCCCAGTCCTTCCTC 58.700 55.000 0.00 0.00 0.00 3.71
6623 6839 1.359130 CAAATTCCCCCAGTCCTTCCT 59.641 52.381 0.00 0.00 0.00 3.36
6624 6840 1.619704 CCAAATTCCCCCAGTCCTTCC 60.620 57.143 0.00 0.00 0.00 3.46
6625 6841 1.357761 TCCAAATTCCCCCAGTCCTTC 59.642 52.381 0.00 0.00 0.00 3.46
6626 6842 1.077169 GTCCAAATTCCCCCAGTCCTT 59.923 52.381 0.00 0.00 0.00 3.36
6627 6843 0.704664 GTCCAAATTCCCCCAGTCCT 59.295 55.000 0.00 0.00 0.00 3.85
6628 6844 0.679960 CGTCCAAATTCCCCCAGTCC 60.680 60.000 0.00 0.00 0.00 3.85
6629 6845 0.037734 ACGTCCAAATTCCCCCAGTC 59.962 55.000 0.00 0.00 0.00 3.51
6630 6846 1.003928 GTACGTCCAAATTCCCCCAGT 59.996 52.381 0.00 0.00 0.00 4.00
6631 6847 1.746470 GTACGTCCAAATTCCCCCAG 58.254 55.000 0.00 0.00 0.00 4.45
6632 6848 0.036199 CGTACGTCCAAATTCCCCCA 60.036 55.000 7.22 0.00 0.00 4.96
6633 6849 0.745486 CCGTACGTCCAAATTCCCCC 60.745 60.000 15.21 0.00 0.00 5.40
6634 6850 1.371337 GCCGTACGTCCAAATTCCCC 61.371 60.000 15.21 0.00 0.00 4.81
6635 6851 0.674269 TGCCGTACGTCCAAATTCCC 60.674 55.000 15.21 0.00 0.00 3.97
6636 6852 1.063469 CATGCCGTACGTCCAAATTCC 59.937 52.381 15.21 0.00 0.00 3.01
6637 6853 1.063469 CCATGCCGTACGTCCAAATTC 59.937 52.381 15.21 0.00 0.00 2.17
6638 6854 1.091537 CCATGCCGTACGTCCAAATT 58.908 50.000 15.21 0.00 0.00 1.82
6639 6855 0.035820 ACCATGCCGTACGTCCAAAT 60.036 50.000 15.21 0.00 0.00 2.32
6640 6856 0.951525 CACCATGCCGTACGTCCAAA 60.952 55.000 15.21 0.00 0.00 3.28
6641 6857 1.374885 CACCATGCCGTACGTCCAA 60.375 57.895 15.21 0.00 0.00 3.53
6642 6858 2.263227 CACCATGCCGTACGTCCA 59.737 61.111 15.21 11.23 0.00 4.02
6643 6859 2.510691 CCACCATGCCGTACGTCC 60.511 66.667 15.21 5.37 0.00 4.79
6644 6860 1.518572 CTCCACCATGCCGTACGTC 60.519 63.158 15.21 0.71 0.00 4.34
6645 6861 2.221906 GACTCCACCATGCCGTACGT 62.222 60.000 15.21 0.00 0.00 3.57
6646 6862 1.518572 GACTCCACCATGCCGTACG 60.519 63.158 8.69 8.69 0.00 3.67
6647 6863 0.460284 CAGACTCCACCATGCCGTAC 60.460 60.000 0.00 0.00 0.00 3.67
6648 6864 1.613317 CCAGACTCCACCATGCCGTA 61.613 60.000 0.00 0.00 0.00 4.02
6649 6865 2.665000 CAGACTCCACCATGCCGT 59.335 61.111 0.00 0.00 0.00 5.68
6650 6866 2.124983 CCAGACTCCACCATGCCG 60.125 66.667 0.00 0.00 0.00 5.69
6651 6867 1.078143 GTCCAGACTCCACCATGCC 60.078 63.158 0.00 0.00 0.00 4.40
6652 6868 0.326264 AAGTCCAGACTCCACCATGC 59.674 55.000 0.00 0.00 41.58 4.06
6653 6869 1.065854 GGAAGTCCAGACTCCACCATG 60.066 57.143 0.00 0.00 41.58 3.66
6654 6870 1.280457 GGAAGTCCAGACTCCACCAT 58.720 55.000 0.00 0.00 41.58 3.55
6655 6871 1.185618 CGGAAGTCCAGACTCCACCA 61.186 60.000 0.00 0.00 41.58 4.17
6656 6872 0.898789 TCGGAAGTCCAGACTCCACC 60.899 60.000 0.00 4.96 41.58 4.61
6657 6873 0.244178 GTCGGAAGTCCAGACTCCAC 59.756 60.000 0.00 3.13 41.58 4.02
6658 6874 1.241990 CGTCGGAAGTCCAGACTCCA 61.242 60.000 15.47 0.00 41.58 3.86
6659 6875 1.242665 ACGTCGGAAGTCCAGACTCC 61.243 60.000 15.47 3.88 41.58 3.85
6660 6876 0.109689 CACGTCGGAAGTCCAGACTC 60.110 60.000 15.47 0.00 41.58 3.36
6661 6877 1.957562 CACGTCGGAAGTCCAGACT 59.042 57.895 15.47 0.00 44.94 3.24
6662 6878 1.733399 GCACGTCGGAAGTCCAGAC 60.733 63.158 0.00 10.45 36.72 3.51
6663 6879 2.649034 GCACGTCGGAAGTCCAGA 59.351 61.111 0.00 0.00 35.14 3.86
6664 6880 2.432628 GGCACGTCGGAAGTCCAG 60.433 66.667 0.00 0.00 35.14 3.86
6665 6881 3.228017 TGGCACGTCGGAAGTCCA 61.228 61.111 9.73 9.73 35.14 4.02
6666 6882 2.737376 GTGGCACGTCGGAAGTCC 60.737 66.667 0.00 0.30 0.00 3.85
6667 6883 2.737376 GGTGGCACGTCGGAAGTC 60.737 66.667 12.17 0.00 0.00 3.01
6668 6884 3.542676 TGGTGGCACGTCGGAAGT 61.543 61.111 12.17 0.00 0.00 3.01
6669 6885 3.041940 GTGGTGGCACGTCGGAAG 61.042 66.667 12.17 0.00 0.00 3.46
6670 6886 4.953868 CGTGGTGGCACGTCGGAA 62.954 66.667 19.85 0.00 42.91 4.30
6677 6893 1.647084 GAGTTTGACGTGGTGGCAC 59.353 57.895 9.70 9.70 0.00 5.01
6678 6894 1.525077 GGAGTTTGACGTGGTGGCA 60.525 57.895 0.00 0.00 0.00 4.92
6679 6895 2.604174 CGGAGTTTGACGTGGTGGC 61.604 63.158 0.00 0.00 0.00 5.01
6680 6896 1.068417 TCGGAGTTTGACGTGGTGG 59.932 57.895 0.00 0.00 0.00 4.61
6681 6897 0.528901 TGTCGGAGTTTGACGTGGTG 60.529 55.000 0.00 0.00 39.22 4.17
6682 6898 0.529119 GTGTCGGAGTTTGACGTGGT 60.529 55.000 0.00 0.00 39.22 4.16
6683 6899 1.219522 GGTGTCGGAGTTTGACGTGG 61.220 60.000 0.00 0.00 39.22 4.94
6684 6900 1.219522 GGGTGTCGGAGTTTGACGTG 61.220 60.000 0.00 0.00 39.22 4.49
6685 6901 1.068585 GGGTGTCGGAGTTTGACGT 59.931 57.895 0.00 0.00 39.22 4.34
6686 6902 1.666872 GGGGTGTCGGAGTTTGACG 60.667 63.158 0.00 0.00 39.22 4.35
6687 6903 1.666872 CGGGGTGTCGGAGTTTGAC 60.667 63.158 0.00 0.00 36.88 3.18
6688 6904 1.401318 TTCGGGGTGTCGGAGTTTGA 61.401 55.000 0.00 0.00 0.00 2.69
6689 6905 1.070105 TTCGGGGTGTCGGAGTTTG 59.930 57.895 0.00 0.00 0.00 2.93
6690 6906 1.070275 GTTCGGGGTGTCGGAGTTT 59.930 57.895 0.00 0.00 0.00 2.66
6691 6907 2.739132 GTTCGGGGTGTCGGAGTT 59.261 61.111 0.00 0.00 0.00 3.01
6692 6908 3.308705 GGTTCGGGGTGTCGGAGT 61.309 66.667 0.00 0.00 0.00 3.85
6693 6909 4.078516 GGGTTCGGGGTGTCGGAG 62.079 72.222 0.00 0.00 0.00 4.63
6694 6910 4.938074 TGGGTTCGGGGTGTCGGA 62.938 66.667 0.00 0.00 0.00 4.55
6695 6911 4.692475 GTGGGTTCGGGGTGTCGG 62.692 72.222 0.00 0.00 0.00 4.79
6696 6912 4.692475 GGTGGGTTCGGGGTGTCG 62.692 72.222 0.00 0.00 0.00 4.35
6697 6913 4.340246 GGGTGGGTTCGGGGTGTC 62.340 72.222 0.00 0.00 0.00 3.67
6701 6917 3.454188 TTTTGGGGTGGGTTCGGGG 62.454 63.158 0.00 0.00 0.00 5.73
6702 6918 2.198980 TTTTGGGGTGGGTTCGGG 59.801 61.111 0.00 0.00 0.00 5.14
6703 6919 2.204461 GGTTTTGGGGTGGGTTCGG 61.204 63.158 0.00 0.00 0.00 4.30
6704 6920 1.152631 AGGTTTTGGGGTGGGTTCG 60.153 57.895 0.00 0.00 0.00 3.95
6705 6921 0.187606 AGAGGTTTTGGGGTGGGTTC 59.812 55.000 0.00 0.00 0.00 3.62
6706 6922 0.639943 AAGAGGTTTTGGGGTGGGTT 59.360 50.000 0.00 0.00 0.00 4.11
6707 6923 0.639943 AAAGAGGTTTTGGGGTGGGT 59.360 50.000 0.00 0.00 0.00 4.51
6708 6924 1.338107 GAAAGAGGTTTTGGGGTGGG 58.662 55.000 0.00 0.00 0.00 4.61
6709 6925 1.963515 CTGAAAGAGGTTTTGGGGTGG 59.036 52.381 0.00 0.00 34.07 4.61
6710 6926 1.341209 GCTGAAAGAGGTTTTGGGGTG 59.659 52.381 0.00 0.00 34.07 4.61
6711 6927 1.217942 AGCTGAAAGAGGTTTTGGGGT 59.782 47.619 0.00 0.00 34.07 4.95
6712 6928 1.889170 GAGCTGAAAGAGGTTTTGGGG 59.111 52.381 0.00 0.00 34.07 4.96
6713 6929 1.537202 CGAGCTGAAAGAGGTTTTGGG 59.463 52.381 0.00 0.00 34.07 4.12
6714 6930 2.481952 CTCGAGCTGAAAGAGGTTTTGG 59.518 50.000 0.00 0.00 34.07 3.28
6715 6931 3.393800 TCTCGAGCTGAAAGAGGTTTTG 58.606 45.455 7.81 0.00 34.07 2.44
6716 6932 3.753294 TCTCGAGCTGAAAGAGGTTTT 57.247 42.857 7.81 0.00 34.07 2.43
6717 6933 3.070302 AGTTCTCGAGCTGAAAGAGGTTT 59.930 43.478 7.81 0.00 34.07 3.27
6718 6934 2.630580 AGTTCTCGAGCTGAAAGAGGTT 59.369 45.455 7.81 0.00 34.07 3.50
6719 6935 2.230266 GAGTTCTCGAGCTGAAAGAGGT 59.770 50.000 7.81 0.00 34.07 3.85
6720 6936 2.491693 AGAGTTCTCGAGCTGAAAGAGG 59.508 50.000 7.81 0.00 34.07 3.69
6721 6937 3.848272 AGAGTTCTCGAGCTGAAAGAG 57.152 47.619 7.81 0.00 34.07 2.85
6722 6938 3.365465 CGAAGAGTTCTCGAGCTGAAAGA 60.365 47.826 7.81 0.00 34.07 2.52
6723 6939 2.914214 CGAAGAGTTCTCGAGCTGAAAG 59.086 50.000 7.81 0.00 0.00 2.62
6724 6940 2.351835 CCGAAGAGTTCTCGAGCTGAAA 60.352 50.000 7.81 0.00 0.00 2.69
6725 6941 1.200252 CCGAAGAGTTCTCGAGCTGAA 59.800 52.381 7.81 0.00 0.00 3.02
6726 6942 0.805614 CCGAAGAGTTCTCGAGCTGA 59.194 55.000 7.81 0.00 0.00 4.26
6727 6943 0.179150 CCCGAAGAGTTCTCGAGCTG 60.179 60.000 7.81 0.00 0.00 4.24
6728 6944 1.939769 GCCCGAAGAGTTCTCGAGCT 61.940 60.000 7.81 0.00 0.00 4.09
6729 6945 1.517475 GCCCGAAGAGTTCTCGAGC 60.517 63.158 7.81 0.00 0.00 5.03
6730 6946 1.139947 GGCCCGAAGAGTTCTCGAG 59.860 63.158 5.93 5.93 0.00 4.04
6731 6947 1.605451 TGGCCCGAAGAGTTCTCGA 60.605 57.895 0.00 0.00 0.00 4.04
6732 6948 1.446272 GTGGCCCGAAGAGTTCTCG 60.446 63.158 0.00 0.00 0.00 4.04
6733 6949 0.670854 GTGTGGCCCGAAGAGTTCTC 60.671 60.000 0.00 0.00 0.00 2.87
6734 6950 1.371558 GTGTGGCCCGAAGAGTTCT 59.628 57.895 0.00 0.00 0.00 3.01
6735 6951 0.321653 ATGTGTGGCCCGAAGAGTTC 60.322 55.000 0.00 0.00 0.00 3.01
6736 6952 0.110486 AATGTGTGGCCCGAAGAGTT 59.890 50.000 0.00 0.00 0.00 3.01
6737 6953 0.321653 GAATGTGTGGCCCGAAGAGT 60.322 55.000 0.00 0.00 0.00 3.24
6738 6954 0.321564 TGAATGTGTGGCCCGAAGAG 60.322 55.000 0.00 0.00 0.00 2.85
6739 6955 0.605319 GTGAATGTGTGGCCCGAAGA 60.605 55.000 0.00 0.00 0.00 2.87
6740 6956 0.606401 AGTGAATGTGTGGCCCGAAG 60.606 55.000 0.00 0.00 0.00 3.79
6741 6957 0.605319 GAGTGAATGTGTGGCCCGAA 60.605 55.000 0.00 0.00 0.00 4.30
6742 6958 1.003839 GAGTGAATGTGTGGCCCGA 60.004 57.895 0.00 0.00 0.00 5.14
6743 6959 2.040544 GGAGTGAATGTGTGGCCCG 61.041 63.158 0.00 0.00 0.00 6.13
6744 6960 2.040544 CGGAGTGAATGTGTGGCCC 61.041 63.158 0.00 0.00 0.00 5.80
6745 6961 2.040544 CCGGAGTGAATGTGTGGCC 61.041 63.158 0.00 0.00 0.00 5.36
6746 6962 2.690778 GCCGGAGTGAATGTGTGGC 61.691 63.158 5.05 0.00 0.00 5.01
6747 6963 0.249120 TAGCCGGAGTGAATGTGTGG 59.751 55.000 5.05 0.00 0.00 4.17
6748 6964 1.204704 TCTAGCCGGAGTGAATGTGTG 59.795 52.381 5.05 0.00 0.00 3.82
6749 6965 1.557099 TCTAGCCGGAGTGAATGTGT 58.443 50.000 5.05 0.00 0.00 3.72
6750 6966 2.748605 GATCTAGCCGGAGTGAATGTG 58.251 52.381 5.05 0.00 0.00 3.21
6751 6967 1.338337 CGATCTAGCCGGAGTGAATGT 59.662 52.381 5.05 0.00 0.00 2.71
6752 6968 2.057503 CGATCTAGCCGGAGTGAATG 57.942 55.000 5.05 0.00 0.00 2.67
6761 6977 2.728817 GGGTGACCGATCTAGCCG 59.271 66.667 0.00 0.00 43.64 5.52
6773 6989 1.075212 TGAATGCAGGTTGATGGGTGA 59.925 47.619 0.00 0.00 0.00 4.02
6778 6994 2.159156 CCACCATGAATGCAGGTTGATG 60.159 50.000 0.00 0.00 32.15 3.07
6779 6995 2.104967 CCACCATGAATGCAGGTTGAT 58.895 47.619 0.00 0.00 32.15 2.57
6780 6996 1.548081 CCACCATGAATGCAGGTTGA 58.452 50.000 0.00 0.00 32.15 3.18
6788 7004 2.491152 GCCGTGCCACCATGAATG 59.509 61.111 0.00 0.00 0.00 2.67
6798 7014 3.093278 CTTCTCAATCGCCGTGCC 58.907 61.111 0.00 0.00 0.00 5.01
6802 7018 1.855360 GAGTAAGCTTCTCAATCGCCG 59.145 52.381 0.00 0.00 32.79 6.46
6805 7021 2.464865 CCGGAGTAAGCTTCTCAATCG 58.535 52.381 20.36 15.90 34.04 3.34
6823 7039 2.879907 CTTCAATGTGGGCAGCCG 59.120 61.111 5.00 0.00 0.00 5.52
6842 7058 2.282110 CCCATGTGTGGTGGCGAA 60.282 61.111 0.00 0.00 44.48 4.70
6845 7061 0.755686 TTTTTCCCATGTGTGGTGGC 59.244 50.000 0.00 0.00 44.48 5.01
6863 7165 3.869065 TCACTTTTCGGTGTCAGACTTT 58.131 40.909 1.31 0.00 38.28 2.66
6884 7186 2.108976 CATAGTCGCACCGGCCAT 59.891 61.111 0.00 0.00 36.38 4.40
6891 7193 3.548818 GCAAATTGGATCCATAGTCGCAC 60.549 47.826 17.06 0.00 0.00 5.34
6919 7222 4.135153 CTCCAGAGACCGTGGGCG 62.135 72.222 0.00 0.00 35.58 6.13
6941 7244 2.579787 GACGAGCCATGGACGACG 60.580 66.667 28.96 23.10 0.00 5.12
7007 7310 3.660111 GCGGTGTGCAGGGACAAC 61.660 66.667 0.00 0.00 45.45 3.32
7020 7323 3.706373 CCTAGTGGCTGTGGCGGT 61.706 66.667 0.00 0.00 39.81 5.68
7021 7324 4.473520 CCCTAGTGGCTGTGGCGG 62.474 72.222 0.00 0.00 39.81 6.13
7022 7325 3.390521 TCCCTAGTGGCTGTGGCG 61.391 66.667 0.00 0.00 39.81 5.69
7023 7326 2.269241 GTCCCTAGTGGCTGTGGC 59.731 66.667 0.00 0.00 37.82 5.01
7024 7327 2.990479 GGTCCCTAGTGGCTGTGG 59.010 66.667 0.00 0.00 0.00 4.17
7025 7328 2.579201 CGGTCCCTAGTGGCTGTG 59.421 66.667 0.00 0.00 0.00 3.66
7026 7329 3.391382 GCGGTCCCTAGTGGCTGT 61.391 66.667 0.00 0.00 0.00 4.40
7027 7330 4.514577 CGCGGTCCCTAGTGGCTG 62.515 72.222 0.00 0.00 0.00 4.85
7028 7331 4.753662 TCGCGGTCCCTAGTGGCT 62.754 66.667 6.13 0.00 0.00 4.75
7032 7335 1.303888 TGAACTCGCGGTCCCTAGT 60.304 57.895 6.13 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.