Multiple sequence alignment - TraesCS6D01G281200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G281200 chr6D 100.000 3729 0 0 1 3729 388953429 388949701 0.000000e+00 6887.0
1 TraesCS6D01G281200 chr6D 91.922 359 29 0 1 359 1409373 1409731 1.550000e-138 503.0
2 TraesCS6D01G281200 chr6D 91.061 358 32 0 1 358 27145436 27145079 5.600000e-133 484.0
3 TraesCS6D01G281200 chr6B 91.356 2765 115 51 356 3058 581869464 581866762 0.000000e+00 3668.0
4 TraesCS6D01G281200 chr6B 96.124 258 9 1 3472 3729 581854671 581854415 1.600000e-113 420.0
5 TraesCS6D01G281200 chr6B 83.232 328 27 11 3128 3429 581866762 581866437 3.670000e-70 276.0
6 TraesCS6D01G281200 chr6A 90.469 2707 103 43 413 3058 535404945 535402333 0.000000e+00 3426.0
7 TraesCS6D01G281200 chr6A 94.677 263 11 2 3469 3729 535402016 535401755 4.480000e-109 405.0
8 TraesCS6D01G281200 chr6A 87.963 324 23 12 3128 3439 535402333 535402014 5.880000e-98 368.0
9 TraesCS6D01G281200 chr2D 93.855 358 22 0 1 358 490121126 490120769 1.180000e-149 540.0
10 TraesCS6D01G281200 chr2B 93.466 352 23 0 1 352 707981300 707981651 1.190000e-144 523.0
11 TraesCS6D01G281200 chr4D 92.582 364 25 2 1 364 64706344 64706705 4.270000e-144 521.0
12 TraesCS6D01G281200 chr4D 82.463 268 43 4 2013 2279 438153340 438153604 8.050000e-57 231.0
13 TraesCS6D01G281200 chr7B 92.157 357 28 0 2 358 34663637 34663993 4.300000e-139 505.0
14 TraesCS6D01G281200 chr7B 90.000 270 27 0 2028 2297 99089374 99089105 2.130000e-92 350.0
15 TraesCS6D01G281200 chr3B 91.292 356 23 3 1 356 747569272 747569619 2.610000e-131 479.0
16 TraesCS6D01G281200 chr3B 94.118 34 2 0 3074 3107 4263334 4263367 7.000000e-03 52.8
17 TraesCS6D01G281200 chr5B 89.385 358 33 3 1 358 543284170 543283818 2.640000e-121 446.0
18 TraesCS6D01G281200 chr3A 86.740 362 44 3 1 358 333324561 333324922 2.090000e-107 399.0
19 TraesCS6D01G281200 chr7A 81.086 534 50 29 2028 2510 135689646 135689113 2.720000e-101 379.0
20 TraesCS6D01G281200 chr7A 97.222 36 1 0 3071 3106 5779453 5779418 1.120000e-05 62.1
21 TraesCS6D01G281200 chr7D 91.606 274 21 2 2028 2300 136204684 136204412 9.780000e-101 377.0
22 TraesCS6D01G281200 chr7D 94.737 38 2 0 3071 3108 46907474 46907437 4.020000e-05 60.2
23 TraesCS6D01G281200 chr4A 83.137 255 41 2 2026 2279 27589625 27589878 8.050000e-57 231.0
24 TraesCS6D01G281200 chr5A 84.167 240 26 6 2028 2267 393917978 393918205 4.850000e-54 222.0
25 TraesCS6D01G281200 chr5D 82.812 256 30 11 2028 2282 304163177 304162935 2.260000e-52 217.0
26 TraesCS6D01G281200 chr5D 100.000 33 0 0 3073 3105 253807917 253807949 1.120000e-05 62.1
27 TraesCS6D01G281200 chr1D 97.368 38 1 0 3071 3108 111059104 111059067 8.640000e-07 65.8
28 TraesCS6D01G281200 chr1D 95.122 41 2 0 3068 3108 356862357 356862397 8.640000e-07 65.8
29 TraesCS6D01G281200 chr2A 94.737 38 2 0 3068 3105 729774861 729774898 4.020000e-05 60.2
30 TraesCS6D01G281200 chrUn 92.105 38 3 0 3068 3105 28955483 28955520 2.000000e-03 54.7
31 TraesCS6D01G281200 chr1A 96.970 33 0 1 3074 3106 152410764 152410795 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G281200 chr6D 388949701 388953429 3728 True 6887.000000 6887 100.000000 1 3729 1 chr6D.!!$R2 3728
1 TraesCS6D01G281200 chr6B 581866437 581869464 3027 True 1972.000000 3668 87.294000 356 3429 2 chr6B.!!$R2 3073
2 TraesCS6D01G281200 chr6A 535401755 535404945 3190 True 1399.666667 3426 91.036333 413 3729 3 chr6A.!!$R1 3316
3 TraesCS6D01G281200 chr7A 135689113 135689646 533 True 379.000000 379 81.086000 2028 2510 1 chr7A.!!$R2 482

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 278 0.041312 GCCTTAAGTGTGTGCGTGTG 60.041 55.0 0.97 0.0 0.0 3.82 F
301 302 0.165079 GGTGGCGTGTGTTTGTATCG 59.835 55.0 0.00 0.0 0.0 2.92 F
1202 1225 0.260230 TCTCCTCTTGCTCGGGATCT 59.740 55.0 0.00 0.0 0.0 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1720 1759 0.098025 GAGGAGAGACTGCGAACGAG 59.902 60.0 0.0 0.0 0.00 4.18 R
1722 1761 0.179176 CAGAGGAGAGACTGCGAACG 60.179 60.0 0.0 0.0 0.00 3.95 R
3117 3256 0.447801 GCCTTTGCATGTCCGTGTAG 59.552 55.0 0.0 0.0 37.47 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.736896 GGCGGCGAGTTCGTTCCT 62.737 66.667 12.98 0.00 42.22 3.36
20 21 2.737376 GCGGCGAGTTCGTTCCTT 60.737 61.111 12.98 0.00 42.22 3.36
21 22 2.315386 GCGGCGAGTTCGTTCCTTT 61.315 57.895 12.98 0.00 42.22 3.11
22 23 1.779683 CGGCGAGTTCGTTCCTTTC 59.220 57.895 0.00 0.00 42.22 2.62
23 24 0.666577 CGGCGAGTTCGTTCCTTTCT 60.667 55.000 0.00 0.00 42.22 2.52
24 25 1.509703 GGCGAGTTCGTTCCTTTCTT 58.490 50.000 3.27 0.00 42.22 2.52
25 26 1.194772 GGCGAGTTCGTTCCTTTCTTG 59.805 52.381 3.27 0.00 42.22 3.02
26 27 2.132762 GCGAGTTCGTTCCTTTCTTGA 58.867 47.619 3.27 0.00 42.22 3.02
27 28 2.542595 GCGAGTTCGTTCCTTTCTTGAA 59.457 45.455 3.27 0.00 42.22 2.69
28 29 3.363084 GCGAGTTCGTTCCTTTCTTGAAG 60.363 47.826 3.27 0.00 42.22 3.02
29 30 3.184581 CGAGTTCGTTCCTTTCTTGAAGG 59.815 47.826 0.00 0.00 44.24 3.46
30 31 6.360191 CGAGTTCGTTCCTTTCTTGAAGGC 62.360 50.000 0.00 0.00 43.43 4.35
37 38 0.435008 CTTTCTTGAAGGCGTCGTCG 59.565 55.000 0.00 0.00 40.37 5.12
47 48 4.175489 CGTCGTCGCGGTCCTCAT 62.175 66.667 6.13 0.00 0.00 2.90
48 49 2.181021 GTCGTCGCGGTCCTCATT 59.819 61.111 6.13 0.00 0.00 2.57
49 50 2.158959 GTCGTCGCGGTCCTCATTG 61.159 63.158 6.13 0.00 0.00 2.82
50 51 2.126071 CGTCGCGGTCCTCATTGT 60.126 61.111 6.13 0.00 0.00 2.71
51 52 2.158959 CGTCGCGGTCCTCATTGTC 61.159 63.158 6.13 0.00 0.00 3.18
52 53 1.810030 GTCGCGGTCCTCATTGTCC 60.810 63.158 6.13 0.00 0.00 4.02
53 54 1.982395 TCGCGGTCCTCATTGTCCT 60.982 57.895 6.13 0.00 0.00 3.85
54 55 1.079127 CGCGGTCCTCATTGTCCTT 60.079 57.895 0.00 0.00 0.00 3.36
55 56 1.084370 CGCGGTCCTCATTGTCCTTC 61.084 60.000 0.00 0.00 0.00 3.46
56 57 1.084370 GCGGTCCTCATTGTCCTTCG 61.084 60.000 0.00 0.00 0.00 3.79
57 58 0.246635 CGGTCCTCATTGTCCTTCGT 59.753 55.000 0.00 0.00 0.00 3.85
58 59 1.726853 GGTCCTCATTGTCCTTCGTG 58.273 55.000 0.00 0.00 0.00 4.35
59 60 1.002087 GGTCCTCATTGTCCTTCGTGT 59.998 52.381 0.00 0.00 0.00 4.49
60 61 2.550208 GGTCCTCATTGTCCTTCGTGTT 60.550 50.000 0.00 0.00 0.00 3.32
61 62 2.480419 GTCCTCATTGTCCTTCGTGTTG 59.520 50.000 0.00 0.00 0.00 3.33
62 63 1.197721 CCTCATTGTCCTTCGTGTTGC 59.802 52.381 0.00 0.00 0.00 4.17
63 64 2.146342 CTCATTGTCCTTCGTGTTGCT 58.854 47.619 0.00 0.00 0.00 3.91
64 65 2.143122 TCATTGTCCTTCGTGTTGCTC 58.857 47.619 0.00 0.00 0.00 4.26
65 66 1.197721 CATTGTCCTTCGTGTTGCTCC 59.802 52.381 0.00 0.00 0.00 4.70
66 67 0.179234 TTGTCCTTCGTGTTGCTCCA 59.821 50.000 0.00 0.00 0.00 3.86
67 68 0.249868 TGTCCTTCGTGTTGCTCCAG 60.250 55.000 0.00 0.00 0.00 3.86
68 69 0.951040 GTCCTTCGTGTTGCTCCAGG 60.951 60.000 0.00 0.00 0.00 4.45
69 70 1.672356 CCTTCGTGTTGCTCCAGGG 60.672 63.158 0.00 0.00 0.00 4.45
70 71 1.371183 CTTCGTGTTGCTCCAGGGA 59.629 57.895 0.00 0.00 0.00 4.20
71 72 0.250295 CTTCGTGTTGCTCCAGGGAA 60.250 55.000 0.00 0.00 0.00 3.97
72 73 0.181587 TTCGTGTTGCTCCAGGGAAA 59.818 50.000 0.00 0.00 0.00 3.13
73 74 0.181587 TCGTGTTGCTCCAGGGAAAA 59.818 50.000 0.00 0.00 0.00 2.29
74 75 0.310854 CGTGTTGCTCCAGGGAAAAC 59.689 55.000 6.61 6.61 31.26 2.43
75 76 0.673985 GTGTTGCTCCAGGGAAAACC 59.326 55.000 9.74 0.00 40.67 3.27
76 77 0.469144 TGTTGCTCCAGGGAAAACCC 60.469 55.000 9.74 0.00 41.63 4.11
77 78 0.178961 GTTGCTCCAGGGAAAACCCT 60.179 55.000 1.53 1.53 41.63 4.34
85 86 2.834638 AGGGAAAACCCTGATCCATG 57.165 50.000 7.04 0.00 41.63 3.66
86 87 1.288932 AGGGAAAACCCTGATCCATGG 59.711 52.381 4.97 4.97 41.63 3.66
87 88 1.287739 GGGAAAACCCTGATCCATGGA 59.712 52.381 18.88 18.88 34.82 3.41
88 89 2.091111 GGGAAAACCCTGATCCATGGAT 60.091 50.000 27.66 27.66 34.82 3.41
89 90 6.236428 AGGGAAAACCCTGATCCATGGATC 62.236 50.000 37.76 37.76 44.78 3.36
95 96 2.046892 GATCCATGGATCGGGCGG 60.047 66.667 33.48 0.00 41.09 6.13
96 97 2.849162 ATCCATGGATCGGGCGGT 60.849 61.111 22.15 0.00 0.00 5.68
97 98 3.182590 ATCCATGGATCGGGCGGTG 62.183 63.158 22.15 0.00 0.00 4.94
98 99 4.935495 CCATGGATCGGGCGGTGG 62.935 72.222 5.56 0.00 0.00 4.61
117 118 3.695606 GGAGCTCTGGTGCCGTGA 61.696 66.667 14.64 0.00 0.00 4.35
118 119 2.433318 GAGCTCTGGTGCCGTGAC 60.433 66.667 6.43 0.00 0.00 3.67
119 120 3.941657 GAGCTCTGGTGCCGTGACC 62.942 68.421 6.43 0.00 36.43 4.02
120 121 4.008933 GCTCTGGTGCCGTGACCT 62.009 66.667 2.11 0.00 36.88 3.85
121 122 2.743718 CTCTGGTGCCGTGACCTT 59.256 61.111 2.11 0.00 36.88 3.50
122 123 1.374758 CTCTGGTGCCGTGACCTTC 60.375 63.158 2.11 0.00 36.88 3.46
123 124 1.821061 CTCTGGTGCCGTGACCTTCT 61.821 60.000 2.11 0.00 36.88 2.85
124 125 1.071471 CTGGTGCCGTGACCTTCTT 59.929 57.895 2.11 0.00 36.88 2.52
125 126 1.227823 TGGTGCCGTGACCTTCTTG 60.228 57.895 2.11 0.00 36.88 3.02
126 127 1.070786 GGTGCCGTGACCTTCTTGA 59.929 57.895 0.00 0.00 32.69 3.02
127 128 0.534203 GGTGCCGTGACCTTCTTGAA 60.534 55.000 0.00 0.00 32.69 2.69
128 129 0.868406 GTGCCGTGACCTTCTTGAAG 59.132 55.000 3.55 3.55 0.00 3.02
129 130 0.250295 TGCCGTGACCTTCTTGAAGG 60.250 55.000 23.44 23.44 45.46 3.46
130 131 1.578206 GCCGTGACCTTCTTGAAGGC 61.578 60.000 24.58 18.31 43.80 4.35
131 132 1.291877 CCGTGACCTTCTTGAAGGCG 61.292 60.000 24.58 19.77 43.80 5.52
132 133 1.869690 GTGACCTTCTTGAAGGCGC 59.130 57.895 24.58 19.57 43.80 6.53
133 134 1.302511 TGACCTTCTTGAAGGCGCC 60.303 57.895 21.89 21.89 43.80 6.53
134 135 2.358737 ACCTTCTTGAAGGCGCCG 60.359 61.111 23.20 6.32 43.80 6.46
135 136 3.804193 CCTTCTTGAAGGCGCCGC 61.804 66.667 23.20 18.21 32.43 6.53
150 151 4.379243 CGCCTTGGAGCTCACGGT 62.379 66.667 17.19 0.00 37.15 4.83
151 152 2.032681 GCCTTGGAGCTCACGGTT 59.967 61.111 17.19 0.00 37.15 4.44
152 153 2.035442 GCCTTGGAGCTCACGGTTC 61.035 63.158 17.19 0.00 37.15 3.62
153 154 1.738099 CCTTGGAGCTCACGGTTCG 60.738 63.158 17.19 0.00 30.83 3.95
154 155 1.006102 CTTGGAGCTCACGGTTCGT 60.006 57.895 17.19 0.00 42.36 3.85
155 156 1.006571 TTGGAGCTCACGGTTCGTC 60.007 57.895 17.19 0.00 38.32 4.20
156 157 2.504244 GGAGCTCACGGTTCGTCG 60.504 66.667 17.19 0.00 38.32 5.12
157 158 2.254651 GAGCTCACGGTTCGTCGT 59.745 61.111 9.40 0.00 44.91 4.34
158 159 1.499056 GAGCTCACGGTTCGTCGTA 59.501 57.895 9.40 0.00 41.86 3.43
159 160 0.098376 GAGCTCACGGTTCGTCGTAT 59.902 55.000 9.40 0.00 41.86 3.06
160 161 0.179171 AGCTCACGGTTCGTCGTATG 60.179 55.000 0.00 0.00 41.86 2.39
161 162 0.455633 GCTCACGGTTCGTCGTATGT 60.456 55.000 0.00 0.00 41.86 2.29
162 163 1.256652 CTCACGGTTCGTCGTATGTG 58.743 55.000 0.00 0.00 41.86 3.21
163 164 0.109643 TCACGGTTCGTCGTATGTGG 60.110 55.000 7.14 0.00 41.86 4.17
164 165 1.444895 ACGGTTCGTCGTATGTGGC 60.445 57.895 0.00 0.00 41.98 5.01
165 166 1.153901 CGGTTCGTCGTATGTGGCT 60.154 57.895 0.00 0.00 0.00 4.75
166 167 0.734942 CGGTTCGTCGTATGTGGCTT 60.735 55.000 0.00 0.00 0.00 4.35
167 168 0.997196 GGTTCGTCGTATGTGGCTTC 59.003 55.000 0.00 0.00 0.00 3.86
168 169 0.638746 GTTCGTCGTATGTGGCTTCG 59.361 55.000 0.00 0.00 0.00 3.79
169 170 0.241749 TTCGTCGTATGTGGCTTCGT 59.758 50.000 0.00 0.00 0.00 3.85
170 171 0.179181 TCGTCGTATGTGGCTTCGTC 60.179 55.000 0.00 0.00 0.00 4.20
171 172 0.179171 CGTCGTATGTGGCTTCGTCT 60.179 55.000 0.00 0.00 0.00 4.18
172 173 1.546834 GTCGTATGTGGCTTCGTCTC 58.453 55.000 0.00 0.00 0.00 3.36
173 174 1.132643 GTCGTATGTGGCTTCGTCTCT 59.867 52.381 0.00 0.00 0.00 3.10
174 175 1.816835 TCGTATGTGGCTTCGTCTCTT 59.183 47.619 0.00 0.00 0.00 2.85
175 176 2.159421 TCGTATGTGGCTTCGTCTCTTC 60.159 50.000 0.00 0.00 0.00 2.87
176 177 2.186076 GTATGTGGCTTCGTCTCTTCG 58.814 52.381 0.00 0.00 0.00 3.79
177 178 0.737715 ATGTGGCTTCGTCTCTTCGC 60.738 55.000 0.00 0.00 0.00 4.70
178 179 2.126463 TGGCTTCGTCTCTTCGCG 60.126 61.111 0.00 0.00 0.00 5.87
179 180 2.881352 GGCTTCGTCTCTTCGCGG 60.881 66.667 6.13 0.00 0.00 6.46
180 181 2.126424 GCTTCGTCTCTTCGCGGT 60.126 61.111 6.13 0.00 0.00 5.68
181 182 2.437343 GCTTCGTCTCTTCGCGGTG 61.437 63.158 6.13 0.00 0.00 4.94
182 183 1.801913 CTTCGTCTCTTCGCGGTGG 60.802 63.158 6.13 0.00 0.00 4.61
183 184 2.473664 CTTCGTCTCTTCGCGGTGGT 62.474 60.000 6.13 0.00 0.00 4.16
184 185 2.742710 TTCGTCTCTTCGCGGTGGTG 62.743 60.000 6.13 0.00 0.00 4.17
185 186 2.338984 GTCTCTTCGCGGTGGTGT 59.661 61.111 6.13 0.00 0.00 4.16
186 187 1.300697 GTCTCTTCGCGGTGGTGTT 60.301 57.895 6.13 0.00 0.00 3.32
187 188 1.006571 TCTCTTCGCGGTGGTGTTC 60.007 57.895 6.13 0.00 0.00 3.18
188 189 1.300620 CTCTTCGCGGTGGTGTTCA 60.301 57.895 6.13 0.00 0.00 3.18
189 190 1.557443 CTCTTCGCGGTGGTGTTCAC 61.557 60.000 6.13 0.00 45.34 3.18
190 191 2.938823 CTTCGCGGTGGTGTTCACG 61.939 63.158 6.13 0.00 46.96 4.35
191 192 4.953868 TCGCGGTGGTGTTCACGG 62.954 66.667 6.13 0.00 46.96 4.94
193 194 2.898343 GCGGTGGTGTTCACGGTT 60.898 61.111 0.00 0.00 46.96 4.44
194 195 3.018973 CGGTGGTGTTCACGGTTG 58.981 61.111 0.00 0.00 46.96 3.77
195 196 1.521906 CGGTGGTGTTCACGGTTGA 60.522 57.895 0.00 0.00 46.96 3.18
196 197 1.495584 CGGTGGTGTTCACGGTTGAG 61.496 60.000 0.00 0.00 46.96 3.02
197 198 1.164041 GGTGGTGTTCACGGTTGAGG 61.164 60.000 0.00 0.00 46.96 3.86
198 199 0.179067 GTGGTGTTCACGGTTGAGGA 60.179 55.000 0.00 0.00 36.56 3.71
199 200 0.179067 TGGTGTTCACGGTTGAGGAC 60.179 55.000 0.00 0.00 31.71 3.85
200 201 0.883370 GGTGTTCACGGTTGAGGACC 60.883 60.000 0.00 0.00 45.55 4.46
201 202 0.883370 GTGTTCACGGTTGAGGACCC 60.883 60.000 0.00 0.00 46.35 4.46
202 203 1.052124 TGTTCACGGTTGAGGACCCT 61.052 55.000 0.00 0.00 46.35 4.34
203 204 0.602905 GTTCACGGTTGAGGACCCTG 60.603 60.000 0.00 0.00 46.35 4.45
204 205 1.764571 TTCACGGTTGAGGACCCTGG 61.765 60.000 0.00 0.00 46.35 4.45
205 206 2.122547 ACGGTTGAGGACCCTGGT 60.123 61.111 0.00 0.00 46.35 4.00
206 207 1.156803 ACGGTTGAGGACCCTGGTA 59.843 57.895 0.00 0.00 46.35 3.25
207 208 0.903454 ACGGTTGAGGACCCTGGTAG 60.903 60.000 0.00 0.00 46.35 3.18
208 209 1.602771 GGTTGAGGACCCTGGTAGC 59.397 63.158 0.00 0.00 43.06 3.58
209 210 0.910088 GGTTGAGGACCCTGGTAGCT 60.910 60.000 0.00 0.00 43.06 3.32
210 211 0.537653 GTTGAGGACCCTGGTAGCTC 59.462 60.000 0.00 0.00 0.00 4.09
211 212 0.413832 TTGAGGACCCTGGTAGCTCT 59.586 55.000 0.00 0.00 0.00 4.09
212 213 0.413832 TGAGGACCCTGGTAGCTCTT 59.586 55.000 0.00 0.00 0.00 2.85
213 214 0.827368 GAGGACCCTGGTAGCTCTTG 59.173 60.000 0.00 0.00 0.00 3.02
214 215 0.117340 AGGACCCTGGTAGCTCTTGT 59.883 55.000 0.00 0.00 0.00 3.16
215 216 1.361543 AGGACCCTGGTAGCTCTTGTA 59.638 52.381 0.00 0.00 0.00 2.41
216 217 1.757699 GGACCCTGGTAGCTCTTGTAG 59.242 57.143 0.00 0.00 0.00 2.74
225 226 3.896317 GCTCTTGTAGCGATAGGGG 57.104 57.895 0.00 0.00 42.53 4.79
226 227 1.041437 GCTCTTGTAGCGATAGGGGT 58.959 55.000 0.00 0.00 42.53 4.95
227 228 1.269831 GCTCTTGTAGCGATAGGGGTG 60.270 57.143 0.00 0.00 42.53 4.61
228 229 1.341531 CTCTTGTAGCGATAGGGGTGG 59.658 57.143 0.00 0.00 0.00 4.61
229 230 1.120530 CTTGTAGCGATAGGGGTGGT 58.879 55.000 0.00 0.00 0.00 4.16
230 231 0.828022 TTGTAGCGATAGGGGTGGTG 59.172 55.000 0.00 0.00 0.00 4.17
231 232 0.324923 TGTAGCGATAGGGGTGGTGT 60.325 55.000 0.00 0.00 0.00 4.16
232 233 0.104304 GTAGCGATAGGGGTGGTGTG 59.896 60.000 0.00 0.00 0.00 3.82
233 234 1.046472 TAGCGATAGGGGTGGTGTGG 61.046 60.000 0.00 0.00 0.00 4.17
234 235 2.189521 CGATAGGGGTGGTGTGGC 59.810 66.667 0.00 0.00 0.00 5.01
235 236 2.367202 CGATAGGGGTGGTGTGGCT 61.367 63.158 0.00 0.00 0.00 4.75
236 237 1.224592 GATAGGGGTGGTGTGGCTG 59.775 63.158 0.00 0.00 0.00 4.85
237 238 2.893682 GATAGGGGTGGTGTGGCTGC 62.894 65.000 0.00 0.00 0.00 5.25
243 244 4.994471 TGGTGTGGCTGCGCTCAG 62.994 66.667 9.73 0.00 43.16 3.35
258 259 3.143807 GCTCAGCGCCTATGTATCTAG 57.856 52.381 2.29 0.00 0.00 2.43
259 260 2.733858 GCTCAGCGCCTATGTATCTAGC 60.734 54.545 2.29 0.00 0.00 3.42
260 261 1.819288 TCAGCGCCTATGTATCTAGCC 59.181 52.381 2.29 0.00 0.00 3.93
261 262 1.821753 CAGCGCCTATGTATCTAGCCT 59.178 52.381 2.29 0.00 0.00 4.58
262 263 2.232452 CAGCGCCTATGTATCTAGCCTT 59.768 50.000 2.29 0.00 0.00 4.35
263 264 3.444034 CAGCGCCTATGTATCTAGCCTTA 59.556 47.826 2.29 0.00 0.00 2.69
264 265 4.082190 CAGCGCCTATGTATCTAGCCTTAA 60.082 45.833 2.29 0.00 0.00 1.85
265 266 4.158764 AGCGCCTATGTATCTAGCCTTAAG 59.841 45.833 2.29 0.00 0.00 1.85
266 267 4.082136 GCGCCTATGTATCTAGCCTTAAGT 60.082 45.833 0.00 0.00 0.00 2.24
267 268 5.403246 CGCCTATGTATCTAGCCTTAAGTG 58.597 45.833 0.97 0.00 0.00 3.16
268 269 5.047943 CGCCTATGTATCTAGCCTTAAGTGT 60.048 44.000 0.97 0.00 0.00 3.55
269 270 6.159988 GCCTATGTATCTAGCCTTAAGTGTG 58.840 44.000 0.97 0.00 0.00 3.82
270 271 6.239345 GCCTATGTATCTAGCCTTAAGTGTGT 60.239 42.308 0.97 0.00 0.00 3.72
271 272 7.148641 CCTATGTATCTAGCCTTAAGTGTGTG 58.851 42.308 0.97 0.00 0.00 3.82
272 273 4.755411 TGTATCTAGCCTTAAGTGTGTGC 58.245 43.478 0.97 0.00 0.00 4.57
273 274 2.363788 TCTAGCCTTAAGTGTGTGCG 57.636 50.000 0.97 0.00 0.00 5.34
274 275 1.616865 TCTAGCCTTAAGTGTGTGCGT 59.383 47.619 0.97 0.00 0.00 5.24
275 276 1.726791 CTAGCCTTAAGTGTGTGCGTG 59.273 52.381 0.97 0.00 0.00 5.34
276 277 0.179056 AGCCTTAAGTGTGTGCGTGT 60.179 50.000 0.97 0.00 0.00 4.49
277 278 0.041312 GCCTTAAGTGTGTGCGTGTG 60.041 55.000 0.97 0.00 0.00 3.82
278 279 1.295792 CCTTAAGTGTGTGCGTGTGT 58.704 50.000 0.97 0.00 0.00 3.72
279 280 1.668751 CCTTAAGTGTGTGCGTGTGTT 59.331 47.619 0.97 0.00 0.00 3.32
280 281 2.538737 CCTTAAGTGTGTGCGTGTGTTG 60.539 50.000 0.97 0.00 0.00 3.33
281 282 1.010580 TAAGTGTGTGCGTGTGTTGG 58.989 50.000 0.00 0.00 0.00 3.77
282 283 1.653094 AAGTGTGTGCGTGTGTTGGG 61.653 55.000 0.00 0.00 0.00 4.12
283 284 2.826287 TGTGTGCGTGTGTTGGGG 60.826 61.111 0.00 0.00 0.00 4.96
284 285 2.826738 GTGTGCGTGTGTTGGGGT 60.827 61.111 0.00 0.00 0.00 4.95
285 286 2.826287 TGTGCGTGTGTTGGGGTG 60.826 61.111 0.00 0.00 0.00 4.61
286 287 3.591835 GTGCGTGTGTTGGGGTGG 61.592 66.667 0.00 0.00 0.00 4.61
290 291 3.591835 GTGTGTTGGGGTGGCGTG 61.592 66.667 0.00 0.00 0.00 5.34
291 292 4.116585 TGTGTTGGGGTGGCGTGT 62.117 61.111 0.00 0.00 0.00 4.49
292 293 3.591835 GTGTTGGGGTGGCGTGTG 61.592 66.667 0.00 0.00 0.00 3.82
293 294 4.116585 TGTTGGGGTGGCGTGTGT 62.117 61.111 0.00 0.00 0.00 3.72
294 295 2.831284 GTTGGGGTGGCGTGTGTT 60.831 61.111 0.00 0.00 0.00 3.32
295 296 2.043852 TTGGGGTGGCGTGTGTTT 60.044 55.556 0.00 0.00 0.00 2.83
296 297 2.418910 TTGGGGTGGCGTGTGTTTG 61.419 57.895 0.00 0.00 0.00 2.93
297 298 2.831284 GGGGTGGCGTGTGTTTGT 60.831 61.111 0.00 0.00 0.00 2.83
298 299 1.526455 GGGGTGGCGTGTGTTTGTA 60.526 57.895 0.00 0.00 0.00 2.41
299 300 0.891904 GGGGTGGCGTGTGTTTGTAT 60.892 55.000 0.00 0.00 0.00 2.29
300 301 0.519961 GGGTGGCGTGTGTTTGTATC 59.480 55.000 0.00 0.00 0.00 2.24
301 302 0.165079 GGTGGCGTGTGTTTGTATCG 59.835 55.000 0.00 0.00 0.00 2.92
302 303 0.165079 GTGGCGTGTGTTTGTATCGG 59.835 55.000 0.00 0.00 0.00 4.18
303 304 1.133869 GGCGTGTGTTTGTATCGGC 59.866 57.895 0.00 0.00 39.49 5.54
304 305 1.296056 GGCGTGTGTTTGTATCGGCT 61.296 55.000 0.00 0.00 42.20 5.52
305 306 0.515564 GCGTGTGTTTGTATCGGCTT 59.484 50.000 0.00 0.00 0.00 4.35
306 307 1.724654 GCGTGTGTTTGTATCGGCTTG 60.725 52.381 0.00 0.00 0.00 4.01
307 308 1.529438 CGTGTGTTTGTATCGGCTTGT 59.471 47.619 0.00 0.00 0.00 3.16
308 309 2.032377 CGTGTGTTTGTATCGGCTTGTT 60.032 45.455 0.00 0.00 0.00 2.83
309 310 3.296628 GTGTGTTTGTATCGGCTTGTTG 58.703 45.455 0.00 0.00 0.00 3.33
310 311 3.002862 GTGTGTTTGTATCGGCTTGTTGA 59.997 43.478 0.00 0.00 0.00 3.18
311 312 3.818210 TGTGTTTGTATCGGCTTGTTGAT 59.182 39.130 0.00 0.00 0.00 2.57
312 313 4.158384 GTGTTTGTATCGGCTTGTTGATG 58.842 43.478 0.00 0.00 0.00 3.07
313 314 3.190327 TGTTTGTATCGGCTTGTTGATGG 59.810 43.478 0.00 0.00 0.00 3.51
314 315 2.779755 TGTATCGGCTTGTTGATGGT 57.220 45.000 0.00 0.00 0.00 3.55
315 316 3.066291 TGTATCGGCTTGTTGATGGTT 57.934 42.857 0.00 0.00 0.00 3.67
316 317 4.209307 TGTATCGGCTTGTTGATGGTTA 57.791 40.909 0.00 0.00 0.00 2.85
317 318 4.776349 TGTATCGGCTTGTTGATGGTTAT 58.224 39.130 0.00 0.00 0.00 1.89
318 319 5.189928 TGTATCGGCTTGTTGATGGTTATT 58.810 37.500 0.00 0.00 0.00 1.40
319 320 4.637483 ATCGGCTTGTTGATGGTTATTG 57.363 40.909 0.00 0.00 0.00 1.90
320 321 2.163412 TCGGCTTGTTGATGGTTATTGC 59.837 45.455 0.00 0.00 0.00 3.56
321 322 2.164219 CGGCTTGTTGATGGTTATTGCT 59.836 45.455 0.00 0.00 0.00 3.91
322 323 3.367292 CGGCTTGTTGATGGTTATTGCTT 60.367 43.478 0.00 0.00 0.00 3.91
323 324 4.568956 GGCTTGTTGATGGTTATTGCTTT 58.431 39.130 0.00 0.00 0.00 3.51
324 325 5.621104 CGGCTTGTTGATGGTTATTGCTTTA 60.621 40.000 0.00 0.00 0.00 1.85
325 326 6.340522 GGCTTGTTGATGGTTATTGCTTTAT 58.659 36.000 0.00 0.00 0.00 1.40
326 327 7.488322 GGCTTGTTGATGGTTATTGCTTTATA 58.512 34.615 0.00 0.00 0.00 0.98
327 328 8.143835 GGCTTGTTGATGGTTATTGCTTTATAT 58.856 33.333 0.00 0.00 0.00 0.86
343 344 6.730960 CTTTATATATAAAGCGGGGCGAAA 57.269 37.500 25.10 1.66 41.69 3.46
344 345 6.730960 TTTATATATAAAGCGGGGCGAAAG 57.269 37.500 12.90 0.00 0.00 2.62
364 365 6.687105 CGAAAGCCTTTTTCGGTAAGATATTG 59.313 38.462 12.72 0.00 45.17 1.90
370 371 7.535139 CCTTTTTCGGTAAGATATTGCAAGAA 58.465 34.615 4.94 0.00 0.00 2.52
400 401 9.339492 GTTTTCTCATCATCTTGTTTCATTCTC 57.661 33.333 0.00 0.00 0.00 2.87
404 405 6.849502 TCATCATCTTGTTTCATTCTCTTGC 58.150 36.000 0.00 0.00 0.00 4.01
408 409 9.842775 ATCATCTTGTTTCATTCTCTTGCTATA 57.157 29.630 0.00 0.00 0.00 1.31
409 410 9.842775 TCATCTTGTTTCATTCTCTTGCTATAT 57.157 29.630 0.00 0.00 0.00 0.86
453 454 9.394477 GAGTTAGACACAAATTACAAAACCATC 57.606 33.333 0.00 0.00 0.00 3.51
454 455 8.908903 AGTTAGACACAAATTACAAAACCATCA 58.091 29.630 0.00 0.00 0.00 3.07
566 580 2.282745 AGAGCACAAAGGGCAGGC 60.283 61.111 0.00 0.00 0.00 4.85
630 644 1.063327 CGACGCCACTTGCACAAAA 59.937 52.632 0.00 0.00 41.33 2.44
680 694 2.125512 GAGCACACGAGGCGGATT 60.126 61.111 0.00 0.00 36.08 3.01
770 784 5.519722 ACGTCTCATTTTCAAAATCACACC 58.480 37.500 0.00 0.00 0.00 4.16
786 800 1.076632 ACCGCCAACTCCCAACAAA 60.077 52.632 0.00 0.00 0.00 2.83
844 858 2.053627 CTTTGTGGCAGCGAACAAATC 58.946 47.619 19.76 0.00 43.33 2.17
875 889 2.174349 GTTGCTTCGCTTCGCCTG 59.826 61.111 0.00 0.00 0.00 4.85
876 890 3.726517 TTGCTTCGCTTCGCCTGC 61.727 61.111 0.00 0.00 0.00 4.85
877 891 4.986645 TGCTTCGCTTCGCCTGCA 62.987 61.111 0.00 0.00 0.00 4.41
878 892 4.451652 GCTTCGCTTCGCCTGCAC 62.452 66.667 0.00 0.00 0.00 4.57
879 893 4.139420 CTTCGCTTCGCCTGCACG 62.139 66.667 0.00 0.00 0.00 5.34
1001 1020 1.750399 ACGCAGCCACAATCCCATC 60.750 57.895 0.00 0.00 0.00 3.51
1048 1067 2.818714 CGAGCCCTTCAGCAGCAG 60.819 66.667 0.00 0.00 34.23 4.24
1121 1140 1.228063 AGCCAGCAGGAACACACAG 60.228 57.895 0.00 0.00 36.89 3.66
1128 1147 2.021723 GCAGGAACACACAGGAAACCA 61.022 52.381 0.00 0.00 0.00 3.67
1201 1224 0.673437 CTCTCCTCTTGCTCGGGATC 59.327 60.000 0.00 0.00 0.00 3.36
1202 1225 0.260230 TCTCCTCTTGCTCGGGATCT 59.740 55.000 0.00 0.00 0.00 2.75
1399 1432 2.525105 TTTATTGAGGAACAGGGCCC 57.475 50.000 16.46 16.46 0.00 5.80
1471 1504 0.948678 TTTTTGGTTCGGCCTTCTCG 59.051 50.000 0.00 0.00 38.35 4.04
1497 1530 4.742012 TCACCTTCTTCTTCTACCTCTGT 58.258 43.478 0.00 0.00 0.00 3.41
1648 1681 1.064611 TCCTCTTCCTCTCACTACCCG 60.065 57.143 0.00 0.00 0.00 5.28
1682 1715 1.635487 CTTCTCCCTCCATGACCCAAA 59.365 52.381 0.00 0.00 0.00 3.28
1711 1744 4.832608 GCCACCCCATCGTCGTCC 62.833 72.222 0.00 0.00 0.00 4.79
1720 1759 2.185494 ATCGTCGTCCTACGCCTCC 61.185 63.158 0.00 0.00 42.21 4.30
1722 1761 2.821688 CGTCGTCCTACGCCTCCTC 61.822 68.421 0.00 0.00 42.21 3.71
1723 1762 2.513204 TCGTCCTACGCCTCCTCG 60.513 66.667 0.00 0.00 42.21 4.63
1724 1763 2.823147 CGTCCTACGCCTCCTCGT 60.823 66.667 0.00 0.00 45.49 4.18
1725 1764 2.404995 CGTCCTACGCCTCCTCGTT 61.405 63.158 0.00 0.00 43.15 3.85
1726 1765 1.432657 GTCCTACGCCTCCTCGTTC 59.567 63.158 0.00 0.00 43.15 3.95
1729 1768 3.047718 CTACGCCTCCTCGTTCGCA 62.048 63.158 0.00 0.00 43.15 5.10
1730 1769 2.921538 CTACGCCTCCTCGTTCGCAG 62.922 65.000 0.00 0.00 43.15 5.18
1731 1770 4.421479 CGCCTCCTCGTTCGCAGT 62.421 66.667 0.00 0.00 0.00 4.40
2578 2686 7.026562 CGTAGCTATGATGTAATCTCTCCTTG 58.973 42.308 7.19 0.00 45.81 3.61
2668 2779 8.968969 AGCAGTAATTAACTAGTAGCAGTAAGT 58.031 33.333 0.00 0.00 35.76 2.24
2861 2972 1.736126 CTTGGTGCACTGCTACTGATG 59.264 52.381 17.98 0.00 0.00 3.07
2876 2987 3.479489 ACTGATGCAGTGATGTGTGAAA 58.521 40.909 0.00 0.00 43.63 2.69
2949 3088 5.579119 TGATTGTGCCAAAGTACAGTATACG 59.421 40.000 0.00 0.00 39.91 3.06
3022 3161 5.627499 TTCTTGGAAACATGTCTATGCAC 57.373 39.130 0.00 0.00 42.32 4.57
3027 3166 2.024176 AACATGTCTATGCACGGGAC 57.976 50.000 0.00 0.00 37.85 4.46
3030 3169 0.901827 ATGTCTATGCACGGGACACA 59.098 50.000 16.76 3.48 41.75 3.72
3032 3171 1.076332 GTCTATGCACGGGACACAAC 58.924 55.000 9.67 0.00 0.00 3.32
3050 3189 6.329496 ACACAACTTCACAACCAAATTACTG 58.671 36.000 0.00 0.00 0.00 2.74
3052 3191 5.163457 ACAACTTCACAACCAAATTACTGGG 60.163 40.000 1.33 0.00 41.16 4.45
3057 3196 4.066490 CACAACCAAATTACTGGGACGTA 58.934 43.478 1.33 0.00 41.16 3.57
3058 3197 4.067192 ACAACCAAATTACTGGGACGTAC 58.933 43.478 1.33 0.00 41.16 3.67
3059 3198 4.202388 ACAACCAAATTACTGGGACGTACT 60.202 41.667 0.00 0.00 41.16 2.73
3060 3199 4.198028 ACCAAATTACTGGGACGTACTC 57.802 45.455 0.00 0.00 41.16 2.59
3061 3200 3.055602 ACCAAATTACTGGGACGTACTCC 60.056 47.826 0.00 0.00 41.16 3.85
3071 3210 2.889852 GGACGTACTCCCTCAATGTTC 58.110 52.381 0.00 0.00 31.83 3.18
3072 3211 2.496470 GGACGTACTCCCTCAATGTTCT 59.504 50.000 0.00 0.00 31.83 3.01
3073 3212 3.698040 GGACGTACTCCCTCAATGTTCTA 59.302 47.826 0.00 0.00 31.83 2.10
3074 3213 4.159135 GGACGTACTCCCTCAATGTTCTAA 59.841 45.833 0.00 0.00 31.83 2.10
3075 3214 5.337009 GGACGTACTCCCTCAATGTTCTAAA 60.337 44.000 0.00 0.00 31.83 1.85
3076 3215 5.476614 ACGTACTCCCTCAATGTTCTAAAC 58.523 41.667 0.00 0.00 0.00 2.01
3077 3216 4.561606 CGTACTCCCTCAATGTTCTAAACG 59.438 45.833 0.00 0.00 0.00 3.60
3078 3217 3.939066 ACTCCCTCAATGTTCTAAACGG 58.061 45.455 0.00 0.00 0.00 4.44
3079 3218 3.326880 ACTCCCTCAATGTTCTAAACGGT 59.673 43.478 0.00 0.00 0.00 4.83
3080 3219 3.933332 CTCCCTCAATGTTCTAAACGGTC 59.067 47.826 0.00 0.00 0.00 4.79
3081 3220 3.581332 TCCCTCAATGTTCTAAACGGTCT 59.419 43.478 0.00 0.00 0.00 3.85
3082 3221 4.041198 TCCCTCAATGTTCTAAACGGTCTT 59.959 41.667 0.00 0.00 0.00 3.01
3083 3222 5.246656 TCCCTCAATGTTCTAAACGGTCTTA 59.753 40.000 0.00 0.00 0.00 2.10
3084 3223 6.070424 TCCCTCAATGTTCTAAACGGTCTTAT 60.070 38.462 0.00 0.00 0.00 1.73
3085 3224 7.124599 TCCCTCAATGTTCTAAACGGTCTTATA 59.875 37.037 0.00 0.00 0.00 0.98
3086 3225 7.931948 CCCTCAATGTTCTAAACGGTCTTATAT 59.068 37.037 0.00 0.00 0.00 0.86
3087 3226 9.326413 CCTCAATGTTCTAAACGGTCTTATATT 57.674 33.333 0.00 0.00 0.00 1.28
3096 3235 9.086336 TCTAAACGGTCTTATATTTGTTTACGG 57.914 33.333 0.00 0.00 32.41 4.02
3097 3236 7.903995 AAACGGTCTTATATTTGTTTACGGA 57.096 32.000 0.00 0.00 0.00 4.69
3098 3237 7.529880 AACGGTCTTATATTTGTTTACGGAG 57.470 36.000 0.00 0.00 0.00 4.63
3099 3238 6.044682 ACGGTCTTATATTTGTTTACGGAGG 58.955 40.000 0.00 0.00 0.00 4.30
3100 3239 5.464389 CGGTCTTATATTTGTTTACGGAGGG 59.536 44.000 0.00 0.00 0.00 4.30
3101 3240 6.585416 GGTCTTATATTTGTTTACGGAGGGA 58.415 40.000 0.00 0.00 0.00 4.20
3102 3241 6.704937 GGTCTTATATTTGTTTACGGAGGGAG 59.295 42.308 0.00 0.00 0.00 4.30
3103 3242 7.270779 GTCTTATATTTGTTTACGGAGGGAGT 58.729 38.462 0.00 0.00 0.00 3.85
3104 3243 8.416329 GTCTTATATTTGTTTACGGAGGGAGTA 58.584 37.037 0.00 0.00 0.00 2.59
3105 3244 9.151177 TCTTATATTTGTTTACGGAGGGAGTAT 57.849 33.333 0.00 0.00 0.00 2.12
3106 3245 9.420551 CTTATATTTGTTTACGGAGGGAGTATC 57.579 37.037 0.00 0.00 0.00 2.24
3107 3246 5.687166 ATTTGTTTACGGAGGGAGTATCA 57.313 39.130 0.00 0.00 36.25 2.15
3108 3247 4.460948 TTGTTTACGGAGGGAGTATCAC 57.539 45.455 0.00 0.00 40.51 3.06
3120 3259 5.118642 GGGAGTATCACGTATGGTTCTAC 57.881 47.826 0.00 0.00 36.25 2.59
3121 3260 4.581824 GGGAGTATCACGTATGGTTCTACA 59.418 45.833 0.00 0.00 36.25 2.74
3122 3261 5.506982 GGGAGTATCACGTATGGTTCTACAC 60.507 48.000 0.00 0.00 36.25 2.90
3123 3262 5.165911 AGTATCACGTATGGTTCTACACG 57.834 43.478 0.00 0.00 40.15 4.49
3124 3263 2.925578 TCACGTATGGTTCTACACGG 57.074 50.000 0.00 0.00 38.67 4.94
3125 3264 2.435422 TCACGTATGGTTCTACACGGA 58.565 47.619 0.00 0.00 38.67 4.69
3126 3265 2.162208 TCACGTATGGTTCTACACGGAC 59.838 50.000 0.00 0.00 38.67 4.79
3191 3338 2.094442 ACGGAGCAGAGTTCTAGCTTTC 60.094 50.000 0.00 4.15 39.02 2.62
3193 3340 2.234908 GGAGCAGAGTTCTAGCTTTCCA 59.765 50.000 0.00 0.00 39.02 3.53
3194 3341 3.520569 GAGCAGAGTTCTAGCTTTCCAG 58.479 50.000 0.00 0.00 39.02 3.86
3195 3342 3.169099 AGCAGAGTTCTAGCTTTCCAGA 58.831 45.455 0.00 0.00 34.37 3.86
3196 3343 3.056179 AGCAGAGTTCTAGCTTTCCAGAC 60.056 47.826 0.00 0.00 34.37 3.51
3197 3344 3.056179 GCAGAGTTCTAGCTTTCCAGACT 60.056 47.826 0.00 0.00 0.00 3.24
3210 3357 6.156949 AGCTTTCCAGACTTCCAGTTCATATA 59.843 38.462 0.00 0.00 0.00 0.86
3214 3361 6.194967 TCCAGACTTCCAGTTCATATACTCA 58.805 40.000 0.00 0.00 0.00 3.41
3218 3365 7.276658 CAGACTTCCAGTTCATATACTCAACAC 59.723 40.741 0.00 0.00 0.00 3.32
3219 3366 7.004555 ACTTCCAGTTCATATACTCAACACA 57.995 36.000 0.00 0.00 0.00 3.72
3220 3367 7.450074 ACTTCCAGTTCATATACTCAACACAA 58.550 34.615 0.00 0.00 0.00 3.33
3221 3368 7.604164 ACTTCCAGTTCATATACTCAACACAAG 59.396 37.037 0.00 0.00 0.00 3.16
3222 3369 5.874810 TCCAGTTCATATACTCAACACAAGC 59.125 40.000 0.00 0.00 0.00 4.01
3290 3454 6.114221 TGACACTTAACAGCAACAACTTAC 57.886 37.500 0.00 0.00 0.00 2.34
3347 3514 5.272283 TGTCGATTGGTATTACCTCTTCC 57.728 43.478 13.90 0.00 39.58 3.46
3388 3556 4.890088 AGTTTCTACGGATGTGTTTAGCA 58.110 39.130 0.00 0.00 0.00 3.49
3410 3578 0.320421 TTGACTTCCGCCCTCTTTCG 60.320 55.000 0.00 0.00 0.00 3.46
3415 3583 4.840005 CCGCCCTCTTTCGAGCCC 62.840 72.222 0.00 0.00 35.90 5.19
3432 3600 2.378886 AGCCCCTGCCTAACTAAAACTT 59.621 45.455 0.00 0.00 38.69 2.66
3433 3601 2.492088 GCCCCTGCCTAACTAAAACTTG 59.508 50.000 0.00 0.00 0.00 3.16
3434 3602 3.763057 CCCCTGCCTAACTAAAACTTGT 58.237 45.455 0.00 0.00 0.00 3.16
3435 3603 3.506067 CCCCTGCCTAACTAAAACTTGTG 59.494 47.826 0.00 0.00 0.00 3.33
3436 3604 4.394729 CCCTGCCTAACTAAAACTTGTGA 58.605 43.478 0.00 0.00 0.00 3.58
3437 3605 5.010282 CCCTGCCTAACTAAAACTTGTGAT 58.990 41.667 0.00 0.00 0.00 3.06
3438 3606 5.123979 CCCTGCCTAACTAAAACTTGTGATC 59.876 44.000 0.00 0.00 0.00 2.92
3439 3607 5.705441 CCTGCCTAACTAAAACTTGTGATCA 59.295 40.000 0.00 0.00 0.00 2.92
3440 3608 6.375455 CCTGCCTAACTAAAACTTGTGATCAT 59.625 38.462 0.00 0.00 0.00 2.45
3441 3609 7.552687 CCTGCCTAACTAAAACTTGTGATCATA 59.447 37.037 0.00 0.00 0.00 2.15
3442 3610 9.113838 CTGCCTAACTAAAACTTGTGATCATAT 57.886 33.333 0.00 0.00 0.00 1.78
3443 3611 9.109393 TGCCTAACTAAAACTTGTGATCATATC 57.891 33.333 0.00 0.00 0.00 1.63
3444 3612 9.109393 GCCTAACTAAAACTTGTGATCATATCA 57.891 33.333 0.00 0.00 36.84 2.15
3450 3618 9.956720 CTAAAACTTGTGATCATATCATTTCCC 57.043 33.333 0.00 0.00 42.04 3.97
3451 3619 8.599624 AAAACTTGTGATCATATCATTTCCCT 57.400 30.769 0.00 0.00 42.04 4.20
3452 3620 7.814264 AACTTGTGATCATATCATTTCCCTC 57.186 36.000 0.00 0.00 42.04 4.30
3453 3621 6.903516 ACTTGTGATCATATCATTTCCCTCA 58.096 36.000 0.00 0.00 42.04 3.86
3454 3622 6.996879 ACTTGTGATCATATCATTTCCCTCAG 59.003 38.462 0.00 0.00 42.04 3.35
3455 3623 6.505048 TGTGATCATATCATTTCCCTCAGT 57.495 37.500 0.00 0.00 42.04 3.41
3456 3624 6.293698 TGTGATCATATCATTTCCCTCAGTG 58.706 40.000 0.00 0.00 42.04 3.66
3457 3625 6.126681 TGTGATCATATCATTTCCCTCAGTGT 60.127 38.462 0.00 0.00 42.04 3.55
3458 3626 6.769822 GTGATCATATCATTTCCCTCAGTGTT 59.230 38.462 0.00 0.00 42.04 3.32
3459 3627 7.933577 GTGATCATATCATTTCCCTCAGTGTTA 59.066 37.037 0.00 0.00 42.04 2.41
3460 3628 8.493607 TGATCATATCATTTCCCTCAGTGTTAA 58.506 33.333 0.00 0.00 33.59 2.01
3461 3629 9.342308 GATCATATCATTTCCCTCAGTGTTAAA 57.658 33.333 0.00 0.00 0.00 1.52
3462 3630 9.872684 ATCATATCATTTCCCTCAGTGTTAAAT 57.127 29.630 0.00 0.00 0.00 1.40
3463 3631 9.123902 TCATATCATTTCCCTCAGTGTTAAATG 57.876 33.333 12.10 12.10 38.36 2.32
3464 3632 9.123902 CATATCATTTCCCTCAGTGTTAAATGA 57.876 33.333 18.17 18.17 45.45 2.57
3516 3684 5.551760 GTTGTATCCAACTTCCAGTCATG 57.448 43.478 0.00 0.00 46.07 3.07
3520 3689 9.845396 GTTGTATCCAACTTCCAGTCATGGACT 62.845 44.444 0.00 0.00 46.84 3.85
3530 3699 1.134580 AGTCATGGACTGCCGATCTTG 60.135 52.381 0.00 0.00 41.76 3.02
3555 3724 1.535462 CTGTTTGGGTTAGGTCGCAAG 59.465 52.381 0.00 0.00 40.32 4.01
3599 3768 4.152045 CACACGCATTTGCACCATTTAATT 59.848 37.500 3.13 0.00 42.21 1.40
3604 3773 5.804473 CGCATTTGCACCATTTAATTACTCA 59.196 36.000 3.13 0.00 42.21 3.41
3647 3816 2.347731 AGAAAGAAGCGTCCGGATTTC 58.652 47.619 7.81 12.65 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.736896 AGGAACGAACTCGCCGCC 62.737 66.667 0.00 0.00 44.43 6.13
4 5 0.666577 AGAAAGGAACGAACTCGCCG 60.667 55.000 0.00 0.00 44.43 6.46
5 6 1.194772 CAAGAAAGGAACGAACTCGCC 59.805 52.381 0.00 0.00 44.43 5.54
6 7 2.132762 TCAAGAAAGGAACGAACTCGC 58.867 47.619 0.00 0.00 44.43 5.03
7 8 4.376450 CTTCAAGAAAGGAACGAACTCG 57.624 45.455 0.00 0.00 46.33 4.18
18 19 0.435008 CGACGACGCCTTCAAGAAAG 59.565 55.000 0.00 0.00 34.52 2.62
19 20 2.513159 CGACGACGCCTTCAAGAAA 58.487 52.632 0.00 0.00 0.00 2.52
20 21 4.238385 CGACGACGCCTTCAAGAA 57.762 55.556 0.00 0.00 0.00 2.52
30 31 3.678717 AATGAGGACCGCGACGACG 62.679 63.158 8.23 2.12 42.93 5.12
31 32 2.158959 CAATGAGGACCGCGACGAC 61.159 63.158 8.23 0.00 0.00 4.34
32 33 2.180769 CAATGAGGACCGCGACGA 59.819 61.111 8.23 0.00 0.00 4.20
33 34 2.126071 ACAATGAGGACCGCGACG 60.126 61.111 8.23 0.00 0.00 5.12
34 35 1.810030 GGACAATGAGGACCGCGAC 60.810 63.158 8.23 0.17 0.00 5.19
35 36 1.541310 AAGGACAATGAGGACCGCGA 61.541 55.000 8.23 0.00 0.00 5.87
36 37 1.079127 AAGGACAATGAGGACCGCG 60.079 57.895 0.00 0.00 0.00 6.46
37 38 1.084370 CGAAGGACAATGAGGACCGC 61.084 60.000 0.00 0.00 0.00 5.68
38 39 0.246635 ACGAAGGACAATGAGGACCG 59.753 55.000 0.00 0.00 0.00 4.79
39 40 1.002087 ACACGAAGGACAATGAGGACC 59.998 52.381 0.00 0.00 0.00 4.46
40 41 2.457366 ACACGAAGGACAATGAGGAC 57.543 50.000 0.00 0.00 0.00 3.85
41 42 2.766313 CAACACGAAGGACAATGAGGA 58.234 47.619 0.00 0.00 0.00 3.71
42 43 1.197721 GCAACACGAAGGACAATGAGG 59.802 52.381 0.00 0.00 0.00 3.86
43 44 2.146342 AGCAACACGAAGGACAATGAG 58.854 47.619 0.00 0.00 0.00 2.90
44 45 2.143122 GAGCAACACGAAGGACAATGA 58.857 47.619 0.00 0.00 0.00 2.57
45 46 1.197721 GGAGCAACACGAAGGACAATG 59.802 52.381 0.00 0.00 0.00 2.82
46 47 1.202758 TGGAGCAACACGAAGGACAAT 60.203 47.619 0.00 0.00 0.00 2.71
47 48 0.179234 TGGAGCAACACGAAGGACAA 59.821 50.000 0.00 0.00 0.00 3.18
48 49 0.249868 CTGGAGCAACACGAAGGACA 60.250 55.000 0.00 0.00 0.00 4.02
49 50 0.951040 CCTGGAGCAACACGAAGGAC 60.951 60.000 0.00 0.00 0.00 3.85
50 51 1.371183 CCTGGAGCAACACGAAGGA 59.629 57.895 0.00 0.00 0.00 3.36
51 52 1.672356 CCCTGGAGCAACACGAAGG 60.672 63.158 0.00 0.00 0.00 3.46
52 53 0.250295 TTCCCTGGAGCAACACGAAG 60.250 55.000 0.00 0.00 0.00 3.79
53 54 0.181587 TTTCCCTGGAGCAACACGAA 59.818 50.000 0.00 0.00 0.00 3.85
54 55 0.181587 TTTTCCCTGGAGCAACACGA 59.818 50.000 0.00 0.00 0.00 4.35
55 56 0.310854 GTTTTCCCTGGAGCAACACG 59.689 55.000 0.00 0.00 0.00 4.49
56 57 0.673985 GGTTTTCCCTGGAGCAACAC 59.326 55.000 0.00 0.00 0.00 3.32
57 58 3.125520 GGTTTTCCCTGGAGCAACA 57.874 52.632 0.00 0.00 0.00 3.33
68 69 2.826674 TCCATGGATCAGGGTTTTCC 57.173 50.000 11.44 0.00 36.61 3.13
78 79 2.046892 CCGCCCGATCCATGGATC 60.047 66.667 35.76 35.76 45.42 3.36
79 80 2.849162 ACCGCCCGATCCATGGAT 60.849 61.111 27.66 27.66 37.59 3.41
80 81 3.860605 CACCGCCCGATCCATGGA 61.861 66.667 18.88 18.88 0.00 3.41
81 82 4.935495 CCACCGCCCGATCCATGG 62.935 72.222 4.97 4.97 0.00 3.66
94 95 4.767255 CACCAGAGCTCCGCCACC 62.767 72.222 10.93 0.00 0.00 4.61
100 101 3.695606 TCACGGCACCAGAGCTCC 61.696 66.667 10.93 0.00 34.17 4.70
101 102 2.433318 GTCACGGCACCAGAGCTC 60.433 66.667 5.27 5.27 34.17 4.09
102 103 4.008933 GGTCACGGCACCAGAGCT 62.009 66.667 0.00 0.00 36.32 4.09
103 104 3.537206 AAGGTCACGGCACCAGAGC 62.537 63.158 7.70 1.30 39.16 4.09
104 105 1.374758 GAAGGTCACGGCACCAGAG 60.375 63.158 7.70 0.00 39.16 3.35
105 106 1.407656 AAGAAGGTCACGGCACCAGA 61.408 55.000 7.70 0.00 39.16 3.86
106 107 1.071471 AAGAAGGTCACGGCACCAG 59.929 57.895 7.70 0.00 39.16 4.00
107 108 1.227823 CAAGAAGGTCACGGCACCA 60.228 57.895 7.70 0.00 39.16 4.17
108 109 0.534203 TTCAAGAAGGTCACGGCACC 60.534 55.000 0.00 0.00 36.58 5.01
109 110 0.868406 CTTCAAGAAGGTCACGGCAC 59.132 55.000 1.86 0.00 34.87 5.01
110 111 3.305709 CTTCAAGAAGGTCACGGCA 57.694 52.632 1.86 0.00 34.87 5.69
119 120 3.804193 GGCGGCGCCTTCAAGAAG 61.804 66.667 41.44 7.15 46.69 2.85
133 134 3.883744 AACCGTGAGCTCCAAGGCG 62.884 63.158 12.15 7.88 46.59 5.52
134 135 2.032681 AACCGTGAGCTCCAAGGC 59.967 61.111 12.15 0.00 46.59 4.35
136 137 1.006102 ACGAACCGTGAGCTCCAAG 60.006 57.895 12.15 1.57 39.18 3.61
137 138 1.006571 GACGAACCGTGAGCTCCAA 60.007 57.895 12.15 0.00 41.37 3.53
138 139 2.649034 GACGAACCGTGAGCTCCA 59.351 61.111 12.15 0.00 41.37 3.86
139 140 1.915614 TACGACGAACCGTGAGCTCC 61.916 60.000 12.15 1.40 41.37 4.70
140 141 0.098376 ATACGACGAACCGTGAGCTC 59.902 55.000 6.82 6.82 41.37 4.09
141 142 0.179171 CATACGACGAACCGTGAGCT 60.179 55.000 0.00 0.00 41.37 4.09
142 143 0.455633 ACATACGACGAACCGTGAGC 60.456 55.000 0.00 0.00 41.37 4.26
143 144 1.256652 CACATACGACGAACCGTGAG 58.743 55.000 0.00 6.97 41.37 3.51
144 145 0.109643 CCACATACGACGAACCGTGA 60.110 55.000 0.00 0.00 41.37 4.35
145 146 1.680105 GCCACATACGACGAACCGTG 61.680 60.000 0.00 3.26 41.37 4.94
146 147 1.444895 GCCACATACGACGAACCGT 60.445 57.895 0.00 0.00 45.10 4.83
147 148 0.734942 AAGCCACATACGACGAACCG 60.735 55.000 0.00 0.00 0.00 4.44
148 149 0.997196 GAAGCCACATACGACGAACC 59.003 55.000 0.00 0.00 0.00 3.62
149 150 0.638746 CGAAGCCACATACGACGAAC 59.361 55.000 0.00 0.00 0.00 3.95
150 151 0.241749 ACGAAGCCACATACGACGAA 59.758 50.000 0.00 0.00 0.00 3.85
151 152 0.179181 GACGAAGCCACATACGACGA 60.179 55.000 0.00 0.00 0.00 4.20
152 153 0.179171 AGACGAAGCCACATACGACG 60.179 55.000 0.00 0.00 0.00 5.12
153 154 1.132643 AGAGACGAAGCCACATACGAC 59.867 52.381 0.00 0.00 0.00 4.34
154 155 1.460504 AGAGACGAAGCCACATACGA 58.539 50.000 0.00 0.00 0.00 3.43
155 156 2.186076 GAAGAGACGAAGCCACATACG 58.814 52.381 0.00 0.00 0.00 3.06
156 157 2.186076 CGAAGAGACGAAGCCACATAC 58.814 52.381 0.00 0.00 35.09 2.39
157 158 1.469251 GCGAAGAGACGAAGCCACATA 60.469 52.381 0.00 0.00 35.09 2.29
158 159 0.737715 GCGAAGAGACGAAGCCACAT 60.738 55.000 0.00 0.00 35.09 3.21
159 160 1.372997 GCGAAGAGACGAAGCCACA 60.373 57.895 0.00 0.00 35.09 4.17
160 161 2.437343 CGCGAAGAGACGAAGCCAC 61.437 63.158 0.00 0.00 35.09 5.01
161 162 2.126463 CGCGAAGAGACGAAGCCA 60.126 61.111 0.00 0.00 35.09 4.75
162 163 2.881352 CCGCGAAGAGACGAAGCC 60.881 66.667 8.23 0.00 35.09 4.35
163 164 2.126424 ACCGCGAAGAGACGAAGC 60.126 61.111 8.23 0.00 35.09 3.86
164 165 1.801913 CCACCGCGAAGAGACGAAG 60.802 63.158 8.23 0.00 35.09 3.79
165 166 2.257371 CCACCGCGAAGAGACGAA 59.743 61.111 8.23 0.00 35.09 3.85
166 167 2.981909 ACCACCGCGAAGAGACGA 60.982 61.111 8.23 0.00 35.09 4.20
167 168 2.805353 CACCACCGCGAAGAGACG 60.805 66.667 8.23 0.00 0.00 4.18
168 169 1.282930 GAACACCACCGCGAAGAGAC 61.283 60.000 8.23 0.00 0.00 3.36
169 170 1.006571 GAACACCACCGCGAAGAGA 60.007 57.895 8.23 0.00 0.00 3.10
170 171 1.300620 TGAACACCACCGCGAAGAG 60.301 57.895 8.23 0.00 0.00 2.85
171 172 1.593209 GTGAACACCACCGCGAAGA 60.593 57.895 8.23 0.00 39.86 2.87
172 173 2.935955 GTGAACACCACCGCGAAG 59.064 61.111 8.23 0.00 39.86 3.79
173 174 2.962786 CGTGAACACCACCGCGAA 60.963 61.111 8.23 0.00 42.76 4.70
174 175 4.953868 CCGTGAACACCACCGCGA 62.954 66.667 8.23 0.00 42.76 5.87
176 177 2.898343 AACCGTGAACACCACCGC 60.898 61.111 0.00 0.00 42.76 5.68
177 178 1.495584 CTCAACCGTGAACACCACCG 61.496 60.000 0.00 0.00 42.76 4.94
178 179 1.164041 CCTCAACCGTGAACACCACC 61.164 60.000 0.00 0.00 42.76 4.61
179 180 0.179067 TCCTCAACCGTGAACACCAC 60.179 55.000 0.00 0.00 42.30 4.16
180 181 0.179067 GTCCTCAACCGTGAACACCA 60.179 55.000 0.00 0.00 31.88 4.17
181 182 0.883370 GGTCCTCAACCGTGAACACC 60.883 60.000 0.00 0.00 38.58 4.16
182 183 2.613390 GGTCCTCAACCGTGAACAC 58.387 57.895 0.00 0.00 38.58 3.32
191 192 0.537653 GAGCTACCAGGGTCCTCAAC 59.462 60.000 11.86 0.00 31.34 3.18
192 193 0.413832 AGAGCTACCAGGGTCCTCAA 59.586 55.000 16.58 0.00 34.64 3.02
193 194 0.413832 AAGAGCTACCAGGGTCCTCA 59.586 55.000 16.58 0.00 34.64 3.86
194 195 0.827368 CAAGAGCTACCAGGGTCCTC 59.173 60.000 9.74 9.74 34.64 3.71
195 196 0.117340 ACAAGAGCTACCAGGGTCCT 59.883 55.000 0.00 0.00 34.64 3.85
196 197 1.757699 CTACAAGAGCTACCAGGGTCC 59.242 57.143 0.00 0.00 34.64 4.46
208 209 1.341531 CCACCCCTATCGCTACAAGAG 59.658 57.143 0.00 0.00 0.00 2.85
209 210 1.342674 ACCACCCCTATCGCTACAAGA 60.343 52.381 0.00 0.00 0.00 3.02
210 211 1.120530 ACCACCCCTATCGCTACAAG 58.879 55.000 0.00 0.00 0.00 3.16
211 212 0.828022 CACCACCCCTATCGCTACAA 59.172 55.000 0.00 0.00 0.00 2.41
212 213 0.324923 ACACCACCCCTATCGCTACA 60.325 55.000 0.00 0.00 0.00 2.74
213 214 0.104304 CACACCACCCCTATCGCTAC 59.896 60.000 0.00 0.00 0.00 3.58
214 215 1.046472 CCACACCACCCCTATCGCTA 61.046 60.000 0.00 0.00 0.00 4.26
215 216 2.367202 CCACACCACCCCTATCGCT 61.367 63.158 0.00 0.00 0.00 4.93
216 217 2.189521 CCACACCACCCCTATCGC 59.810 66.667 0.00 0.00 0.00 4.58
217 218 2.189521 GCCACACCACCCCTATCG 59.810 66.667 0.00 0.00 0.00 2.92
218 219 1.224592 CAGCCACACCACCCCTATC 59.775 63.158 0.00 0.00 0.00 2.08
219 220 2.983879 GCAGCCACACCACCCCTAT 61.984 63.158 0.00 0.00 0.00 2.57
220 221 3.646715 GCAGCCACACCACCCCTA 61.647 66.667 0.00 0.00 0.00 3.53
239 240 2.159310 GGCTAGATACATAGGCGCTGAG 60.159 54.545 7.64 0.00 38.40 3.35
240 241 1.819288 GGCTAGATACATAGGCGCTGA 59.181 52.381 7.64 0.00 38.40 4.26
241 242 2.285827 GGCTAGATACATAGGCGCTG 57.714 55.000 7.64 0.00 38.40 5.18
245 246 6.159988 CACACTTAAGGCTAGATACATAGGC 58.840 44.000 7.53 0.00 46.02 3.93
246 247 7.148641 CACACACTTAAGGCTAGATACATAGG 58.851 42.308 7.53 0.00 0.00 2.57
247 248 6.642950 GCACACACTTAAGGCTAGATACATAG 59.357 42.308 7.53 0.00 0.00 2.23
248 249 6.513180 GCACACACTTAAGGCTAGATACATA 58.487 40.000 7.53 0.00 0.00 2.29
249 250 5.360591 GCACACACTTAAGGCTAGATACAT 58.639 41.667 7.53 0.00 0.00 2.29
250 251 4.676986 CGCACACACTTAAGGCTAGATACA 60.677 45.833 7.53 0.00 0.00 2.29
251 252 3.797256 CGCACACACTTAAGGCTAGATAC 59.203 47.826 7.53 0.00 0.00 2.24
252 253 3.446161 ACGCACACACTTAAGGCTAGATA 59.554 43.478 7.53 0.00 0.00 1.98
253 254 2.233922 ACGCACACACTTAAGGCTAGAT 59.766 45.455 7.53 0.00 0.00 1.98
254 255 1.616865 ACGCACACACTTAAGGCTAGA 59.383 47.619 7.53 0.00 0.00 2.43
255 256 1.726791 CACGCACACACTTAAGGCTAG 59.273 52.381 7.53 0.00 0.00 3.42
256 257 1.069513 ACACGCACACACTTAAGGCTA 59.930 47.619 7.53 0.00 0.00 3.93
257 258 0.179056 ACACGCACACACTTAAGGCT 60.179 50.000 7.53 0.00 0.00 4.58
258 259 0.041312 CACACGCACACACTTAAGGC 60.041 55.000 7.53 0.00 0.00 4.35
259 260 1.295792 ACACACGCACACACTTAAGG 58.704 50.000 7.53 0.00 0.00 2.69
260 261 2.538737 CCAACACACGCACACACTTAAG 60.539 50.000 0.00 0.00 0.00 1.85
261 262 1.398739 CCAACACACGCACACACTTAA 59.601 47.619 0.00 0.00 0.00 1.85
262 263 1.010580 CCAACACACGCACACACTTA 58.989 50.000 0.00 0.00 0.00 2.24
263 264 1.653094 CCCAACACACGCACACACTT 61.653 55.000 0.00 0.00 0.00 3.16
264 265 2.112198 CCCAACACACGCACACACT 61.112 57.895 0.00 0.00 0.00 3.55
265 266 2.407210 CCCAACACACGCACACAC 59.593 61.111 0.00 0.00 0.00 3.82
266 267 2.826287 CCCCAACACACGCACACA 60.826 61.111 0.00 0.00 0.00 3.72
267 268 2.826738 ACCCCAACACACGCACAC 60.827 61.111 0.00 0.00 0.00 3.82
268 269 2.826287 CACCCCAACACACGCACA 60.826 61.111 0.00 0.00 0.00 4.57
269 270 3.591835 CCACCCCAACACACGCAC 61.592 66.667 0.00 0.00 0.00 5.34
273 274 3.591835 CACGCCACCCCAACACAC 61.592 66.667 0.00 0.00 0.00 3.82
274 275 4.116585 ACACGCCACCCCAACACA 62.117 61.111 0.00 0.00 0.00 3.72
275 276 3.591835 CACACGCCACCCCAACAC 61.592 66.667 0.00 0.00 0.00 3.32
276 277 3.646942 AACACACGCCACCCCAACA 62.647 57.895 0.00 0.00 0.00 3.33
277 278 2.419739 AAACACACGCCACCCCAAC 61.420 57.895 0.00 0.00 0.00 3.77
278 279 2.043852 AAACACACGCCACCCCAA 60.044 55.556 0.00 0.00 0.00 4.12
279 280 2.266816 TACAAACACACGCCACCCCA 62.267 55.000 0.00 0.00 0.00 4.96
280 281 0.891904 ATACAAACACACGCCACCCC 60.892 55.000 0.00 0.00 0.00 4.95
281 282 0.519961 GATACAAACACACGCCACCC 59.480 55.000 0.00 0.00 0.00 4.61
282 283 0.165079 CGATACAAACACACGCCACC 59.835 55.000 0.00 0.00 0.00 4.61
283 284 0.165079 CCGATACAAACACACGCCAC 59.835 55.000 0.00 0.00 0.00 5.01
284 285 1.570347 GCCGATACAAACACACGCCA 61.570 55.000 0.00 0.00 0.00 5.69
285 286 1.133869 GCCGATACAAACACACGCC 59.866 57.895 0.00 0.00 0.00 5.68
286 287 0.515564 AAGCCGATACAAACACACGC 59.484 50.000 0.00 0.00 0.00 5.34
287 288 1.529438 ACAAGCCGATACAAACACACG 59.471 47.619 0.00 0.00 0.00 4.49
288 289 3.002862 TCAACAAGCCGATACAAACACAC 59.997 43.478 0.00 0.00 0.00 3.82
289 290 3.206964 TCAACAAGCCGATACAAACACA 58.793 40.909 0.00 0.00 0.00 3.72
290 291 3.889196 TCAACAAGCCGATACAAACAC 57.111 42.857 0.00 0.00 0.00 3.32
291 292 3.190327 CCATCAACAAGCCGATACAAACA 59.810 43.478 0.00 0.00 0.00 2.83
292 293 3.190535 ACCATCAACAAGCCGATACAAAC 59.809 43.478 0.00 0.00 0.00 2.93
293 294 3.417101 ACCATCAACAAGCCGATACAAA 58.583 40.909 0.00 0.00 0.00 2.83
294 295 3.066291 ACCATCAACAAGCCGATACAA 57.934 42.857 0.00 0.00 0.00 2.41
295 296 2.779755 ACCATCAACAAGCCGATACA 57.220 45.000 0.00 0.00 0.00 2.29
296 297 5.510671 CAATAACCATCAACAAGCCGATAC 58.489 41.667 0.00 0.00 0.00 2.24
297 298 4.036262 GCAATAACCATCAACAAGCCGATA 59.964 41.667 0.00 0.00 0.00 2.92
298 299 3.181487 GCAATAACCATCAACAAGCCGAT 60.181 43.478 0.00 0.00 0.00 4.18
299 300 2.163412 GCAATAACCATCAACAAGCCGA 59.837 45.455 0.00 0.00 0.00 5.54
300 301 2.164219 AGCAATAACCATCAACAAGCCG 59.836 45.455 0.00 0.00 0.00 5.52
301 302 3.874392 AGCAATAACCATCAACAAGCC 57.126 42.857 0.00 0.00 0.00 4.35
321 322 5.122711 GCTTTCGCCCCGCTTTATATATAAA 59.877 40.000 15.47 15.47 0.00 1.40
322 323 4.632688 GCTTTCGCCCCGCTTTATATATAA 59.367 41.667 0.81 0.81 0.00 0.98
323 324 4.186159 GCTTTCGCCCCGCTTTATATATA 58.814 43.478 0.00 0.00 0.00 0.86
324 325 3.007635 GCTTTCGCCCCGCTTTATATAT 58.992 45.455 0.00 0.00 0.00 0.86
325 326 2.419667 GCTTTCGCCCCGCTTTATATA 58.580 47.619 0.00 0.00 0.00 0.86
326 327 1.235724 GCTTTCGCCCCGCTTTATAT 58.764 50.000 0.00 0.00 0.00 0.86
327 328 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
328 329 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
338 339 2.224784 TCTTACCGAAAAAGGCTTTCGC 59.775 45.455 13.76 7.41 46.89 4.70
340 341 6.472486 GCAATATCTTACCGAAAAAGGCTTTC 59.528 38.462 13.76 0.41 33.69 2.62
341 342 6.071616 TGCAATATCTTACCGAAAAAGGCTTT 60.072 34.615 6.68 6.68 33.69 3.51
342 343 5.417580 TGCAATATCTTACCGAAAAAGGCTT 59.582 36.000 0.00 0.00 33.69 4.35
343 344 4.947388 TGCAATATCTTACCGAAAAAGGCT 59.053 37.500 0.00 0.00 33.69 4.58
344 345 5.243426 TGCAATATCTTACCGAAAAAGGC 57.757 39.130 0.00 0.00 33.69 4.35
345 346 7.083875 TCTTGCAATATCTTACCGAAAAAGG 57.916 36.000 0.00 0.00 37.30 3.11
346 347 9.573133 AATTCTTGCAATATCTTACCGAAAAAG 57.427 29.630 0.00 0.00 0.00 2.27
349 350 9.391006 ACTAATTCTTGCAATATCTTACCGAAA 57.609 29.630 0.00 0.00 0.00 3.46
350 351 8.958119 ACTAATTCTTGCAATATCTTACCGAA 57.042 30.769 0.00 0.00 0.00 4.30
351 352 8.958119 AACTAATTCTTGCAATATCTTACCGA 57.042 30.769 0.00 0.00 0.00 4.69
364 365 9.286946 CAAGATGATGAGAAAACTAATTCTTGC 57.713 33.333 0.00 0.00 39.70 4.01
378 379 7.148289 GCAAGAGAATGAAACAAGATGATGAGA 60.148 37.037 0.00 0.00 0.00 3.27
379 380 6.967767 GCAAGAGAATGAAACAAGATGATGAG 59.032 38.462 0.00 0.00 0.00 2.90
380 381 6.657966 AGCAAGAGAATGAAACAAGATGATGA 59.342 34.615 0.00 0.00 0.00 2.92
381 382 6.853720 AGCAAGAGAATGAAACAAGATGATG 58.146 36.000 0.00 0.00 0.00 3.07
382 383 8.749026 ATAGCAAGAGAATGAAACAAGATGAT 57.251 30.769 0.00 0.00 0.00 2.45
566 580 1.735920 GACCTCAGAGTGTGCTGCG 60.736 63.158 0.00 0.00 35.86 5.18
680 694 1.741401 CAAGTCGCGGCCAATGAGA 60.741 57.895 7.31 0.00 0.00 3.27
770 784 0.457851 TGTTTTGTTGGGAGTTGGCG 59.542 50.000 0.00 0.00 0.00 5.69
836 850 0.179215 CTCAGCCGTGCGATTTGTTC 60.179 55.000 0.00 0.00 0.00 3.18
844 858 3.716006 CAACCACTCAGCCGTGCG 61.716 66.667 0.00 0.00 33.60 5.34
901 915 3.340789 GGGCCTTTTATAGCGCCG 58.659 61.111 2.29 0.00 39.66 6.46
1001 1020 2.516888 AACCTCACCGTGGAGTGGG 61.517 63.158 8.87 3.80 38.02 4.61
1121 1140 0.179012 TGAACGGGACCTTGGTTTCC 60.179 55.000 0.00 0.00 0.00 3.13
1149 1172 5.872070 CCGATCTAATAATCCCAGAAGAAGC 59.128 44.000 0.00 0.00 0.00 3.86
1150 1173 7.233389 TCCGATCTAATAATCCCAGAAGAAG 57.767 40.000 0.00 0.00 0.00 2.85
1183 1206 0.260230 AGATCCCGAGCAAGAGGAGA 59.740 55.000 0.00 0.00 31.94 3.71
1201 1224 4.279169 TGAGGTTGGCAAGAAATCAAGAAG 59.721 41.667 0.00 0.00 0.00 2.85
1202 1225 4.037923 GTGAGGTTGGCAAGAAATCAAGAA 59.962 41.667 0.00 0.00 0.00 2.52
1471 1504 5.420739 AGAGGTAGAAGAAGAAGGTGATGTC 59.579 44.000 0.00 0.00 0.00 3.06
1648 1681 5.114764 AGGGAGAAGAGTAGTACTGGTAC 57.885 47.826 7.76 2.97 36.35 3.34
1682 1715 1.290431 TGGGGTGGCCATGTATGAATT 59.710 47.619 9.72 0.00 0.00 2.17
1711 1744 2.278013 GCGAACGAGGAGGCGTAG 60.278 66.667 0.00 0.00 44.86 3.51
1720 1759 0.098025 GAGGAGAGACTGCGAACGAG 59.902 60.000 0.00 0.00 0.00 4.18
1722 1761 0.179176 CAGAGGAGAGACTGCGAACG 60.179 60.000 0.00 0.00 0.00 3.95
1723 1762 3.712020 CAGAGGAGAGACTGCGAAC 57.288 57.895 0.00 0.00 0.00 3.95
1729 1768 1.305718 GGTGGGCAGAGGAGAGACT 60.306 63.158 0.00 0.00 0.00 3.24
1730 1769 1.610673 TGGTGGGCAGAGGAGAGAC 60.611 63.158 0.00 0.00 0.00 3.36
1731 1770 1.610673 GTGGTGGGCAGAGGAGAGA 60.611 63.158 0.00 0.00 0.00 3.10
2533 2638 3.169733 CGGAGCTTAACGAAGACTGTAC 58.830 50.000 0.00 0.00 34.25 2.90
2578 2686 3.038417 CAGCCGCCGATTCGATCC 61.038 66.667 7.83 0.00 0.00 3.36
2639 2747 7.416022 ACTGCTACTAGTTAATTACTGCTACG 58.584 38.462 0.00 0.00 37.73 3.51
2668 2779 6.494491 TCTTACTAAACACCACTGGCTACTTA 59.506 38.462 0.00 0.00 0.00 2.24
2669 2780 5.306160 TCTTACTAAACACCACTGGCTACTT 59.694 40.000 0.00 0.00 0.00 2.24
2670 2781 4.836736 TCTTACTAAACACCACTGGCTACT 59.163 41.667 0.00 0.00 0.00 2.57
2671 2782 5.143376 TCTTACTAAACACCACTGGCTAC 57.857 43.478 0.00 0.00 0.00 3.58
2861 2972 2.030540 AGCACATTTCACACATCACTGC 60.031 45.455 0.00 0.00 0.00 4.40
2876 2987 1.901591 CCACAACTCCAAGAGCACAT 58.098 50.000 0.00 0.00 32.04 3.21
2949 3088 8.633075 TTTTGTTTCTGAAAAGATGTCATCAC 57.367 30.769 15.20 1.95 0.00 3.06
3022 3161 0.661020 GGTTGTGAAGTTGTGTCCCG 59.339 55.000 0.00 0.00 0.00 5.14
3027 3166 5.748152 CCAGTAATTTGGTTGTGAAGTTGTG 59.252 40.000 0.00 0.00 33.38 3.33
3030 3169 5.068591 GTCCCAGTAATTTGGTTGTGAAGTT 59.931 40.000 0.00 0.00 36.45 2.66
3032 3171 4.320202 CGTCCCAGTAATTTGGTTGTGAAG 60.320 45.833 0.00 0.00 36.45 3.02
3052 3191 3.870633 AGAACATTGAGGGAGTACGTC 57.129 47.619 0.00 0.00 34.61 4.34
3057 3196 3.326880 ACCGTTTAGAACATTGAGGGAGT 59.673 43.478 0.00 0.00 0.00 3.85
3058 3197 3.933332 GACCGTTTAGAACATTGAGGGAG 59.067 47.826 0.00 0.00 0.00 4.30
3059 3198 3.581332 AGACCGTTTAGAACATTGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
3060 3199 3.939066 AGACCGTTTAGAACATTGAGGG 58.061 45.455 0.00 0.00 0.00 4.30
3061 3200 8.888579 ATATAAGACCGTTTAGAACATTGAGG 57.111 34.615 0.00 0.00 0.00 3.86
3070 3209 9.086336 CCGTAAACAAATATAAGACCGTTTAGA 57.914 33.333 0.00 0.00 31.53 2.10
3071 3210 9.086336 TCCGTAAACAAATATAAGACCGTTTAG 57.914 33.333 0.00 0.00 31.53 1.85
3072 3211 8.994429 TCCGTAAACAAATATAAGACCGTTTA 57.006 30.769 0.00 0.00 0.00 2.01
3073 3212 7.064966 CCTCCGTAAACAAATATAAGACCGTTT 59.935 37.037 0.00 0.00 0.00 3.60
3074 3213 6.536224 CCTCCGTAAACAAATATAAGACCGTT 59.464 38.462 0.00 0.00 0.00 4.44
3075 3214 6.044682 CCTCCGTAAACAAATATAAGACCGT 58.955 40.000 0.00 0.00 0.00 4.83
3076 3215 5.464389 CCCTCCGTAAACAAATATAAGACCG 59.536 44.000 0.00 0.00 0.00 4.79
3077 3216 6.585416 TCCCTCCGTAAACAAATATAAGACC 58.415 40.000 0.00 0.00 0.00 3.85
3078 3217 7.270779 ACTCCCTCCGTAAACAAATATAAGAC 58.729 38.462 0.00 0.00 0.00 3.01
3079 3218 7.427989 ACTCCCTCCGTAAACAAATATAAGA 57.572 36.000 0.00 0.00 0.00 2.10
3080 3219 9.420551 GATACTCCCTCCGTAAACAAATATAAG 57.579 37.037 0.00 0.00 0.00 1.73
3081 3220 8.926374 TGATACTCCCTCCGTAAACAAATATAA 58.074 33.333 0.00 0.00 0.00 0.98
3082 3221 8.362639 GTGATACTCCCTCCGTAAACAAATATA 58.637 37.037 0.00 0.00 0.00 0.86
3083 3222 7.215085 GTGATACTCCCTCCGTAAACAAATAT 58.785 38.462 0.00 0.00 0.00 1.28
3084 3223 6.576185 GTGATACTCCCTCCGTAAACAAATA 58.424 40.000 0.00 0.00 0.00 1.40
3085 3224 5.425630 GTGATACTCCCTCCGTAAACAAAT 58.574 41.667 0.00 0.00 0.00 2.32
3086 3225 4.618927 CGTGATACTCCCTCCGTAAACAAA 60.619 45.833 0.00 0.00 0.00 2.83
3087 3226 3.119388 CGTGATACTCCCTCCGTAAACAA 60.119 47.826 0.00 0.00 0.00 2.83
3088 3227 2.424601 CGTGATACTCCCTCCGTAAACA 59.575 50.000 0.00 0.00 0.00 2.83
3089 3228 2.424956 ACGTGATACTCCCTCCGTAAAC 59.575 50.000 0.00 0.00 0.00 2.01
3090 3229 2.726821 ACGTGATACTCCCTCCGTAAA 58.273 47.619 0.00 0.00 0.00 2.01
3091 3230 2.425143 ACGTGATACTCCCTCCGTAA 57.575 50.000 0.00 0.00 0.00 3.18
3092 3231 3.405831 CATACGTGATACTCCCTCCGTA 58.594 50.000 0.00 0.00 35.57 4.02
3093 3232 2.228059 CATACGTGATACTCCCTCCGT 58.772 52.381 0.00 0.00 0.00 4.69
3094 3233 1.540267 CCATACGTGATACTCCCTCCG 59.460 57.143 0.00 0.00 0.00 4.63
3095 3234 2.595238 ACCATACGTGATACTCCCTCC 58.405 52.381 0.00 0.00 0.00 4.30
3096 3235 3.890147 AGAACCATACGTGATACTCCCTC 59.110 47.826 0.00 0.00 0.00 4.30
3097 3236 3.912248 AGAACCATACGTGATACTCCCT 58.088 45.455 0.00 0.00 0.00 4.20
3098 3237 4.581824 TGTAGAACCATACGTGATACTCCC 59.418 45.833 0.00 0.00 0.00 4.30
3099 3238 5.517904 GTGTAGAACCATACGTGATACTCC 58.482 45.833 0.00 0.00 0.00 3.85
3100 3239 5.203370 CGTGTAGAACCATACGTGATACTC 58.797 45.833 0.00 0.00 0.00 2.59
3101 3240 4.036027 CCGTGTAGAACCATACGTGATACT 59.964 45.833 0.00 0.00 34.96 2.12
3102 3241 4.035558 TCCGTGTAGAACCATACGTGATAC 59.964 45.833 0.00 0.00 34.96 2.24
3103 3242 4.035558 GTCCGTGTAGAACCATACGTGATA 59.964 45.833 0.00 0.00 34.96 2.15
3104 3243 3.018856 TCCGTGTAGAACCATACGTGAT 58.981 45.455 0.00 0.00 34.96 3.06
3105 3244 2.162208 GTCCGTGTAGAACCATACGTGA 59.838 50.000 0.00 0.00 34.96 4.35
3106 3245 2.095110 TGTCCGTGTAGAACCATACGTG 60.095 50.000 0.00 0.00 34.96 4.49
3107 3246 2.161855 TGTCCGTGTAGAACCATACGT 58.838 47.619 0.00 0.00 34.96 3.57
3108 3247 2.925578 TGTCCGTGTAGAACCATACG 57.074 50.000 0.00 0.00 36.39 3.06
3109 3248 2.864343 GCATGTCCGTGTAGAACCATAC 59.136 50.000 0.00 0.00 0.00 2.39
3110 3249 2.498078 TGCATGTCCGTGTAGAACCATA 59.502 45.455 0.00 0.00 0.00 2.74
3111 3250 1.277842 TGCATGTCCGTGTAGAACCAT 59.722 47.619 0.00 0.00 0.00 3.55
3112 3251 0.682292 TGCATGTCCGTGTAGAACCA 59.318 50.000 0.00 0.00 0.00 3.67
3113 3252 1.803334 TTGCATGTCCGTGTAGAACC 58.197 50.000 0.00 0.00 0.00 3.62
3114 3253 2.159627 CCTTTGCATGTCCGTGTAGAAC 59.840 50.000 0.00 0.00 0.00 3.01
3115 3254 2.422597 CCTTTGCATGTCCGTGTAGAA 58.577 47.619 0.00 0.00 0.00 2.10
3116 3255 1.943968 GCCTTTGCATGTCCGTGTAGA 60.944 52.381 0.00 0.00 37.47 2.59
3117 3256 0.447801 GCCTTTGCATGTCCGTGTAG 59.552 55.000 0.00 0.00 37.47 2.74
3118 3257 0.958382 GGCCTTTGCATGTCCGTGTA 60.958 55.000 0.00 0.00 40.13 2.90
3119 3258 2.268076 GGCCTTTGCATGTCCGTGT 61.268 57.895 0.00 0.00 40.13 4.49
3120 3259 2.568090 GGCCTTTGCATGTCCGTG 59.432 61.111 0.00 0.00 40.13 4.94
3121 3260 2.819984 ATCGGCCTTTGCATGTCCGT 62.820 55.000 0.00 3.22 40.81 4.69
3122 3261 2.051804 GATCGGCCTTTGCATGTCCG 62.052 60.000 0.00 9.90 40.13 4.79
3123 3262 1.031571 TGATCGGCCTTTGCATGTCC 61.032 55.000 0.00 0.00 40.13 4.02
3124 3263 1.027357 ATGATCGGCCTTTGCATGTC 58.973 50.000 0.00 0.00 40.13 3.06
3125 3264 0.742505 CATGATCGGCCTTTGCATGT 59.257 50.000 0.00 0.00 40.13 3.21
3126 3265 0.596600 GCATGATCGGCCTTTGCATG 60.597 55.000 15.95 15.95 40.13 4.06
3196 3343 7.413438 GCTTGTGTTGAGTATATGAACTGGAAG 60.413 40.741 0.00 0.00 42.29 3.46
3197 3344 6.371548 GCTTGTGTTGAGTATATGAACTGGAA 59.628 38.462 0.00 0.00 0.00 3.53
3210 3357 2.609459 CGTTCTTCTGCTTGTGTTGAGT 59.391 45.455 0.00 0.00 0.00 3.41
3214 3361 2.477863 GCAACGTTCTTCTGCTTGTGTT 60.478 45.455 0.00 0.00 33.20 3.32
3218 3365 0.662619 TGGCAACGTTCTTCTGCTTG 59.337 50.000 8.89 0.00 42.51 4.01
3219 3366 0.663153 GTGGCAACGTTCTTCTGCTT 59.337 50.000 8.89 0.00 42.51 3.91
3220 3367 0.463654 TGTGGCAACGTTCTTCTGCT 60.464 50.000 8.89 0.00 42.51 4.24
3221 3368 0.317020 GTGTGGCAACGTTCTTCTGC 60.317 55.000 0.00 0.00 42.51 4.26
3222 3369 1.261619 GAGTGTGGCAACGTTCTTCTG 59.738 52.381 0.00 0.00 42.51 3.02
3290 3454 0.884704 ACTTGGGTGCTGCGTGTAAG 60.885 55.000 0.00 0.33 0.00 2.34
3361 3528 4.330944 ACACATCCGTAGAAACTTGTGA 57.669 40.909 7.76 0.00 38.22 3.58
3388 3556 0.765510 AAGAGGGCGGAAGTCAAAGT 59.234 50.000 0.00 0.00 37.54 2.66
3410 3578 2.026169 AGTTTTAGTTAGGCAGGGGCTC 60.026 50.000 0.00 0.00 39.70 4.70
3415 3583 5.705441 TGATCACAAGTTTTAGTTAGGCAGG 59.295 40.000 0.00 0.00 0.00 4.85
3432 3600 6.126681 ACACTGAGGGAAATGATATGATCACA 60.127 38.462 0.00 0.00 43.01 3.58
3433 3601 6.294473 ACACTGAGGGAAATGATATGATCAC 58.706 40.000 0.00 0.00 43.01 3.06
3434 3602 6.505048 ACACTGAGGGAAATGATATGATCA 57.495 37.500 0.00 0.00 44.55 2.92
3435 3603 8.908786 TTAACACTGAGGGAAATGATATGATC 57.091 34.615 0.00 0.00 0.00 2.92
3436 3604 9.872684 ATTTAACACTGAGGGAAATGATATGAT 57.127 29.630 0.00 0.00 0.00 2.45
3437 3605 9.123902 CATTTAACACTGAGGGAAATGATATGA 57.876 33.333 3.50 0.00 38.99 2.15
3438 3606 9.123902 TCATTTAACACTGAGGGAAATGATATG 57.876 33.333 7.29 0.00 40.05 1.78
3442 3610 9.123902 CATATCATTTAACACTGAGGGAAATGA 57.876 33.333 12.22 12.22 45.52 2.57
3443 3611 8.906867 ACATATCATTTAACACTGAGGGAAATG 58.093 33.333 3.24 3.24 38.35 2.32
3444 3612 9.125026 GACATATCATTTAACACTGAGGGAAAT 57.875 33.333 0.00 0.00 0.00 2.17
3445 3613 7.556275 GGACATATCATTTAACACTGAGGGAAA 59.444 37.037 0.00 0.00 0.00 3.13
3446 3614 7.054124 GGACATATCATTTAACACTGAGGGAA 58.946 38.462 0.00 0.00 0.00 3.97
3447 3615 6.591935 GGACATATCATTTAACACTGAGGGA 58.408 40.000 0.00 0.00 0.00 4.20
3448 3616 5.466728 CGGACATATCATTTAACACTGAGGG 59.533 44.000 0.00 0.00 0.00 4.30
3449 3617 6.049149 ACGGACATATCATTTAACACTGAGG 58.951 40.000 0.00 0.00 0.00 3.86
3450 3618 6.756542 TGACGGACATATCATTTAACACTGAG 59.243 38.462 0.00 0.00 0.00 3.35
3451 3619 6.635755 TGACGGACATATCATTTAACACTGA 58.364 36.000 0.00 0.00 0.00 3.41
3452 3620 6.535150 ACTGACGGACATATCATTTAACACTG 59.465 38.462 0.00 0.00 0.00 3.66
3453 3621 6.535150 CACTGACGGACATATCATTTAACACT 59.465 38.462 0.00 0.00 0.00 3.55
3454 3622 6.312918 ACACTGACGGACATATCATTTAACAC 59.687 38.462 0.00 0.00 0.00 3.32
3455 3623 6.403049 ACACTGACGGACATATCATTTAACA 58.597 36.000 0.00 0.00 0.00 2.41
3456 3624 6.903883 ACACTGACGGACATATCATTTAAC 57.096 37.500 0.00 0.00 0.00 2.01
3457 3625 9.607988 ATTAACACTGACGGACATATCATTTAA 57.392 29.630 0.00 0.00 0.00 1.52
3458 3626 9.607988 AATTAACACTGACGGACATATCATTTA 57.392 29.630 0.00 0.00 0.00 1.40
3459 3627 8.506168 AATTAACACTGACGGACATATCATTT 57.494 30.769 0.00 0.00 0.00 2.32
3460 3628 8.506168 AAATTAACACTGACGGACATATCATT 57.494 30.769 0.00 0.00 0.00 2.57
3461 3629 9.042008 GTAAATTAACACTGACGGACATATCAT 57.958 33.333 0.00 0.00 0.00 2.45
3462 3630 8.035984 TGTAAATTAACACTGACGGACATATCA 58.964 33.333 0.00 0.00 0.00 2.15
3463 3631 8.415192 TGTAAATTAACACTGACGGACATATC 57.585 34.615 0.00 0.00 0.00 1.63
3464 3632 8.826710 CATGTAAATTAACACTGACGGACATAT 58.173 33.333 0.00 0.00 30.75 1.78
3465 3633 7.820386 ACATGTAAATTAACACTGACGGACATA 59.180 33.333 0.00 0.00 30.75 2.29
3466 3634 6.653320 ACATGTAAATTAACACTGACGGACAT 59.347 34.615 0.00 0.00 30.75 3.06
3467 3635 5.992829 ACATGTAAATTAACACTGACGGACA 59.007 36.000 0.00 0.00 30.75 4.02
3514 3682 0.904649 TCACAAGATCGGCAGTCCAT 59.095 50.000 0.00 0.00 0.00 3.41
3515 3683 0.247460 CTCACAAGATCGGCAGTCCA 59.753 55.000 0.00 0.00 0.00 4.02
3516 3684 1.086634 GCTCACAAGATCGGCAGTCC 61.087 60.000 0.00 0.00 0.00 3.85
3520 3689 0.035317 AACAGCTCACAAGATCGGCA 59.965 50.000 0.00 0.00 0.00 5.69
3530 3699 2.152016 GACCTAACCCAAACAGCTCAC 58.848 52.381 0.00 0.00 0.00 3.51
3555 3724 5.138095 GTGTAAAGTTAAGAGTGCTTTCGC 58.862 41.667 0.00 0.00 35.56 4.70
3572 3741 1.405463 TGGTGCAAATGCGTGTGTAAA 59.595 42.857 0.00 0.00 45.83 2.01
3574 3743 1.242989 ATGGTGCAAATGCGTGTGTA 58.757 45.000 0.00 0.00 45.83 2.90
3599 3768 5.688823 CACATTTGCTGAATTCGTTGAGTA 58.311 37.500 0.04 0.00 0.00 2.59
3663 3832 2.519771 AGCTTGGAATGAATGCTCCA 57.480 45.000 0.00 0.00 40.03 3.86
3673 3842 3.536956 TTCGTCGGATAAGCTTGGAAT 57.463 42.857 9.86 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.