Multiple sequence alignment - TraesCS6D01G278900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G278900 chr6D 100.000 3894 0 0 1 3894 387104424 387100531 0.000000e+00 7191
1 TraesCS6D01G278900 chr6D 100.000 3211 0 0 4374 7584 387100051 387096841 0.000000e+00 5930
2 TraesCS6D01G278900 chr6D 98.795 166 2 0 3447 3612 389700706 389700541 5.750000e-76 296
3 TraesCS6D01G278900 chr6D 95.506 178 8 0 3438 3615 167211849 167211672 1.250000e-72 285
4 TraesCS6D01G278900 chr6D 84.906 159 11 6 2014 2171 387101864 387101718 1.710000e-31 148
5 TraesCS6D01G278900 chr6D 84.906 159 11 6 2561 2707 387102411 387102254 1.710000e-31 148
6 TraesCS6D01G278900 chr6B 92.356 2682 126 25 4515 7137 578456755 578454094 0.000000e+00 3744
7 TraesCS6D01G278900 chr6B 96.199 1105 37 5 2348 3449 578458158 578457056 0.000000e+00 1803
8 TraesCS6D01G278900 chr6B 90.517 1276 78 24 740 1991 578460306 578459050 0.000000e+00 1646
9 TraesCS6D01G278900 chr6B 95.376 346 11 1 1990 2330 578458889 578458544 5.170000e-151 545
10 TraesCS6D01G278900 chr6B 89.388 245 23 3 502 745 578461318 578461076 9.560000e-79 305
11 TraesCS6D01G278900 chr6B 96.045 177 5 2 3444 3620 211161475 211161649 3.460000e-73 287
12 TraesCS6D01G278900 chr6B 93.671 158 9 1 3611 3767 578457057 578456900 1.270000e-57 235
13 TraesCS6D01G278900 chr6B 95.868 121 5 0 3759 3879 578456876 578456756 6.000000e-46 196
14 TraesCS6D01G278900 chr6B 84.906 159 11 8 2561 2707 578458865 578458708 1.710000e-31 148
15 TraesCS6D01G278900 chr6B 94.444 72 4 0 2257 2328 578459517 578459446 2.240000e-20 111
16 TraesCS6D01G278900 chr6A 86.502 1978 157 47 2 1948 532424104 532422206 0.000000e+00 2073
17 TraesCS6D01G278900 chr6A 92.984 1354 56 13 4515 5833 532420306 532418957 0.000000e+00 1938
18 TraesCS6D01G278900 chr6A 95.298 1106 42 10 2350 3449 532421707 532420606 0.000000e+00 1746
19 TraesCS6D01G278900 chr6A 89.066 1381 73 27 5791 7114 532418974 532417615 0.000000e+00 1642
20 TraesCS6D01G278900 chr6A 89.663 445 34 5 7106 7550 532417464 532417032 2.390000e-154 556
21 TraesCS6D01G278900 chr6A 95.531 179 8 0 3437 3615 222571233 222571411 3.460000e-73 287
22 TraesCS6D01G278900 chr6A 95.484 155 5 2 3614 3767 532420604 532420451 5.880000e-61 246
23 TraesCS6D01G278900 chr6A 95.868 121 5 0 3759 3879 532420427 532420307 6.000000e-46 196
24 TraesCS6D01G278900 chr6A 84.810 158 14 4 2014 2171 532421497 532421350 4.740000e-32 150
25 TraesCS6D01G278900 chr6A 85.827 127 14 1 2122 2248 532422141 532422019 1.720000e-26 132
26 TraesCS6D01G278900 chr1B 89.460 389 38 2 7197 7584 353950583 353950197 8.840000e-134 488
27 TraesCS6D01G278900 chr4A 89.460 389 25 7 7197 7584 732853103 732853476 1.910000e-130 477
28 TraesCS6D01G278900 chr5B 88.432 389 43 2 7197 7584 381387616 381387229 1.150000e-127 468
29 TraesCS6D01G278900 chr5B 80.307 391 64 9 7198 7584 536212984 536212603 4.480000e-72 283
30 TraesCS6D01G278900 chr3D 87.817 394 46 2 7192 7584 91361978 91361586 1.930000e-125 460
31 TraesCS6D01G278900 chr3D 85.347 389 41 6 7197 7584 544276273 544275900 9.230000e-104 388
32 TraesCS6D01G278900 chr3D 88.298 94 9 2 3355 3448 572629368 572629277 2.240000e-20 111
33 TraesCS6D01G278900 chr1D 87.404 389 45 2 7197 7584 258959072 258959457 1.940000e-120 444
34 TraesCS6D01G278900 chr3B 85.641 390 53 3 7197 7584 708903196 708902808 2.550000e-109 407
35 TraesCS6D01G278900 chr7D 82.443 393 62 5 7197 7584 292502717 292503107 3.390000e-88 337
36 TraesCS6D01G278900 chr7D 96.000 175 7 0 3444 3618 69592828 69592654 1.250000e-72 285
37 TraesCS6D01G278900 chr4B 95.604 182 8 0 3444 3625 488893290 488893109 7.440000e-75 292
38 TraesCS6D01G278900 chr7A 95.082 183 8 1 3448 3630 320981173 320981354 3.460000e-73 287
39 TraesCS6D01G278900 chr5D 94.565 184 7 3 3444 3624 420206212 420206029 1.610000e-71 281
40 TraesCS6D01G278900 chr5A 91.388 209 9 8 3448 3653 546824143 546824345 2.080000e-70 278


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G278900 chr6D 387096841 387104424 7583 True 3354.250000 7191 92.453000 1 7584 4 chr6D.!!$R3 7583
1 TraesCS6D01G278900 chr6B 578454094 578461318 7224 True 970.333333 3744 92.525000 502 7137 9 chr6B.!!$R1 6635
2 TraesCS6D01G278900 chr6A 532417032 532424104 7072 True 964.333333 2073 90.611333 2 7550 9 chr6A.!!$R1 7548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 110 0.038310 GGTCCTCTTCCACCCCTTTG 59.962 60.000 0.00 0.00 0.00 2.77 F
147 148 0.110644 CTTCGCTTGCTTTGACGGAC 60.111 55.000 0.00 0.00 0.00 4.79 F
1387 2206 0.173481 TGAATCGCTCGCTGCTACTT 59.827 50.000 0.00 0.00 40.11 2.24 F
1388 2207 0.574454 GAATCGCTCGCTGCTACTTG 59.426 55.000 0.00 0.00 40.11 3.16 F
1418 2237 0.833287 GGTGGCCATCTTCAGAGCTA 59.167 55.000 9.72 0.00 0.00 3.32 F
1856 2679 1.062587 GCCCGATGAACATTTCAGTCG 59.937 52.381 10.91 10.91 43.98 4.18 F
2166 3151 1.815003 GTGTCCTTGGATGCTGGAAAG 59.185 52.381 1.65 0.00 0.00 2.62 F
3135 4560 2.039879 TGCCTTGTTAGAGGAGGTTTCC 59.960 50.000 0.00 0.00 44.39 3.13 F
4417 5878 0.319083 CTACACTAACCACCACGCCA 59.681 55.000 0.00 0.00 0.00 5.69 F
5072 6541 0.176680 CGAGAGCTGTGCACCCTATT 59.823 55.000 15.69 2.87 0.00 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1452 2271 0.478072 ATTCCCTGAACCACAGCACA 59.522 50.000 0.00 0.00 44.52 4.57 R
1636 2456 0.698238 TCCCCAACCCAGTGAATCTG 59.302 55.000 0.00 0.00 43.27 2.90 R
2241 3231 0.460311 ATCGGAATCGTCAGGGTGAC 59.540 55.000 0.00 0.00 43.65 3.67 R
2679 4103 0.679002 CCAGCATCCAAGGACACCTG 60.679 60.000 0.00 0.00 32.13 4.00 R
3135 4560 2.618709 GGCCTTCTCATTTATCCAACCG 59.381 50.000 0.00 0.00 0.00 4.44 R
3683 5111 0.961753 CAGCAAAACTCCCACCCTTC 59.038 55.000 0.00 0.00 0.00 3.46 R
3816 5277 3.037560 AGTTTGAGGGTCGAACTCCCG 62.038 57.143 13.88 0.00 45.45 5.14 R
5072 6541 0.040157 GCATGACTTTCGCAAGTGCA 60.040 50.000 4.84 4.04 43.79 4.57 R
5845 7372 0.105964 GCAAAACCTTTCCACCCACC 59.894 55.000 0.00 0.00 0.00 4.61 R
6846 8402 0.034059 CGACTTCAAGTCACCAGCCT 59.966 55.000 17.81 0.00 45.30 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 1.671054 CCGTGGGTGTCGCATTTCT 60.671 57.895 0.00 0.00 0.00 2.52
81 82 0.960364 TGTCGCATTTCTCTTGGGGC 60.960 55.000 0.00 0.00 32.78 5.80
108 109 1.489560 CGGTCCTCTTCCACCCCTTT 61.490 60.000 0.00 0.00 0.00 3.11
109 110 0.038310 GGTCCTCTTCCACCCCTTTG 59.962 60.000 0.00 0.00 0.00 2.77
110 111 1.064825 GTCCTCTTCCACCCCTTTGA 58.935 55.000 0.00 0.00 0.00 2.69
113 114 1.545651 CCTCTTCCACCCCTTTGACAC 60.546 57.143 0.00 0.00 0.00 3.67
117 118 0.764890 TCCACCCCTTTGACACTCTG 59.235 55.000 0.00 0.00 0.00 3.35
131 132 2.230660 CACTCTGGGGTGAAAACCTTC 58.769 52.381 0.00 0.00 39.34 3.46
133 134 0.536460 TCTGGGGTGAAAACCTTCGC 60.536 55.000 0.00 0.00 40.68 4.70
136 137 0.313987 GGGGTGAAAACCTTCGCTTG 59.686 55.000 0.00 0.00 41.10 4.01
142 143 2.425312 TGAAAACCTTCGCTTGCTTTGA 59.575 40.909 0.00 0.00 33.94 2.69
147 148 0.110644 CTTCGCTTGCTTTGACGGAC 60.111 55.000 0.00 0.00 0.00 4.79
183 185 1.393539 CATGGCGTCGTTACCTTCTTG 59.606 52.381 0.00 0.00 0.00 3.02
190 192 1.377612 GTTACCTTCTTGGGGGCGT 59.622 57.895 0.00 0.00 41.11 5.68
200 202 2.588877 GGGGGCGTCATCGATGTG 60.589 66.667 24.09 18.27 39.71 3.21
202 204 1.449601 GGGGCGTCATCGATGTGTT 60.450 57.895 24.09 0.00 39.71 3.32
209 211 1.468520 GTCATCGATGTGTTTGGTGGG 59.531 52.381 24.09 0.00 0.00 4.61
218 220 0.752376 TGTTTGGTGGGTTTCGGTCC 60.752 55.000 0.00 0.00 0.00 4.46
223 225 3.235481 TGGGTTTCGGTCCTGCGA 61.235 61.111 0.00 0.00 0.00 5.10
227 229 1.662446 GTTTCGGTCCTGCGACGAA 60.662 57.895 0.00 0.00 40.17 3.85
228 230 1.012486 GTTTCGGTCCTGCGACGAAT 61.012 55.000 0.00 0.00 40.17 3.34
229 231 0.734942 TTTCGGTCCTGCGACGAATC 60.735 55.000 0.00 0.00 40.17 2.52
246 248 1.117994 ATCTCATGCGCTTCTCCTCA 58.882 50.000 9.73 0.00 0.00 3.86
248 250 0.175302 CTCATGCGCTTCTCCTCAGT 59.825 55.000 9.73 0.00 0.00 3.41
295 297 2.620779 TGGTGTGTTTTTGTCGTGTG 57.379 45.000 0.00 0.00 0.00 3.82
296 298 1.880675 TGGTGTGTTTTTGTCGTGTGT 59.119 42.857 0.00 0.00 0.00 3.72
297 299 2.293677 TGGTGTGTTTTTGTCGTGTGTT 59.706 40.909 0.00 0.00 0.00 3.32
298 300 3.243434 TGGTGTGTTTTTGTCGTGTGTTT 60.243 39.130 0.00 0.00 0.00 2.83
299 301 3.736759 GGTGTGTTTTTGTCGTGTGTTTT 59.263 39.130 0.00 0.00 0.00 2.43
300 302 4.209495 GGTGTGTTTTTGTCGTGTGTTTTT 59.791 37.500 0.00 0.00 0.00 1.94
326 328 8.816640 TTTTGTTATCTGCTTTTGAGGATTTC 57.183 30.769 0.00 0.00 0.00 2.17
351 353 4.875536 TCAACATCATGTATCCTTGTTCGG 59.124 41.667 0.00 0.00 0.00 4.30
353 355 4.191544 ACATCATGTATCCTTGTTCGGTG 58.808 43.478 0.00 0.00 0.00 4.94
367 369 6.349777 CCTTGTTCGGTGAATTGGCTTTATAA 60.350 38.462 0.00 0.00 0.00 0.98
369 371 7.867305 TGTTCGGTGAATTGGCTTTATAATA 57.133 32.000 0.00 0.00 0.00 0.98
370 372 8.458573 TGTTCGGTGAATTGGCTTTATAATAT 57.541 30.769 0.00 0.00 0.00 1.28
387 393 9.661563 TTTATAATATATAAAGCGGGGTGTGAG 57.338 33.333 0.00 0.00 0.00 3.51
388 394 2.256117 ATATAAAGCGGGGTGTGAGC 57.744 50.000 0.00 0.00 0.00 4.26
394 400 4.394712 CGGGGTGTGAGCCTGGTC 62.395 72.222 0.00 0.00 38.45 4.02
429 435 6.238184 GCCATCACTTTTGTCCAAAGAAAAAG 60.238 38.462 3.52 5.76 44.40 2.27
432 438 8.598075 CATCACTTTTGTCCAAAGAAAAAGAAG 58.402 33.333 12.61 6.21 44.40 2.85
514 520 9.689976 AATGTTTCATCACGAAATGACATTAAA 57.310 25.926 0.00 0.00 45.21 1.52
617 623 1.787847 CCATGTCTTCCACGAACGC 59.212 57.895 0.00 0.00 0.00 4.84
621 627 0.250124 TGTCTTCCACGAACGCCATT 60.250 50.000 0.00 0.00 0.00 3.16
632 638 3.124636 ACGAACGCCATTTAGTGATGAAC 59.875 43.478 0.00 0.00 0.00 3.18
657 663 3.862267 TCACAAGCAACGAAAACATTTGG 59.138 39.130 0.00 0.00 0.00 3.28
678 684 2.369394 CAATGTTTGCTACTCCCTCCC 58.631 52.381 0.00 0.00 0.00 4.30
697 703 7.348274 TCCCTCCCATCCATATTACTTATCATC 59.652 40.741 0.00 0.00 0.00 2.92
767 1551 5.682943 TCCTTTCAATTTTACTGTCCACG 57.317 39.130 0.00 0.00 0.00 4.94
809 1609 6.618287 TTCAAAGTCACCAACACTTCATAG 57.382 37.500 0.00 0.00 32.71 2.23
817 1617 6.704493 GTCACCAACACTTCATAGAAGTAACA 59.296 38.462 11.64 0.00 0.00 2.41
818 1618 7.225931 GTCACCAACACTTCATAGAAGTAACAA 59.774 37.037 11.64 0.00 0.00 2.83
1377 2196 0.318275 CTAGCTCCCGTGAATCGCTC 60.318 60.000 0.00 0.00 38.35 5.03
1378 2197 2.060004 TAGCTCCCGTGAATCGCTCG 62.060 60.000 0.00 0.00 38.35 5.03
1379 2198 2.956964 CTCCCGTGAATCGCTCGC 60.957 66.667 0.00 0.00 38.35 5.03
1383 2202 2.882777 CGTGAATCGCTCGCTGCT 60.883 61.111 0.00 0.00 40.11 4.24
1384 2203 1.586303 CGTGAATCGCTCGCTGCTA 60.586 57.895 0.00 0.00 40.11 3.49
1386 2205 0.526524 GTGAATCGCTCGCTGCTACT 60.527 55.000 0.00 0.00 40.11 2.57
1387 2206 0.173481 TGAATCGCTCGCTGCTACTT 59.827 50.000 0.00 0.00 40.11 2.24
1388 2207 0.574454 GAATCGCTCGCTGCTACTTG 59.426 55.000 0.00 0.00 40.11 3.16
1389 2208 1.424493 AATCGCTCGCTGCTACTTGC 61.424 55.000 0.00 0.00 40.11 4.01
1394 2213 3.786101 CGCTGCTACTTGCGTCAT 58.214 55.556 0.00 0.00 46.09 3.06
1395 2214 1.346197 CGCTGCTACTTGCGTCATG 59.654 57.895 0.00 0.00 46.09 3.07
1396 2215 1.354337 CGCTGCTACTTGCGTCATGT 61.354 55.000 0.00 4.39 46.09 3.21
1402 2221 1.288419 TACTTGCGTCATGTGCGGTG 61.288 55.000 12.59 6.33 34.24 4.94
1412 2231 2.359850 GTGCGGTGGCCATCTTCA 60.360 61.111 15.59 9.13 38.85 3.02
1413 2232 2.046023 TGCGGTGGCCATCTTCAG 60.046 61.111 15.59 0.00 38.85 3.02
1414 2233 2.268920 GCGGTGGCCATCTTCAGA 59.731 61.111 15.59 0.00 0.00 3.27
1415 2234 1.817099 GCGGTGGCCATCTTCAGAG 60.817 63.158 15.59 0.00 0.00 3.35
1416 2235 1.817099 CGGTGGCCATCTTCAGAGC 60.817 63.158 15.59 0.00 0.00 4.09
1417 2236 1.606531 GGTGGCCATCTTCAGAGCT 59.393 57.895 9.72 0.00 0.00 4.09
1418 2237 0.833287 GGTGGCCATCTTCAGAGCTA 59.167 55.000 9.72 0.00 0.00 3.32
1419 2238 1.210478 GGTGGCCATCTTCAGAGCTAA 59.790 52.381 9.72 0.00 0.00 3.09
1420 2239 2.158696 GGTGGCCATCTTCAGAGCTAAT 60.159 50.000 9.72 0.00 0.00 1.73
1422 2241 3.950395 GTGGCCATCTTCAGAGCTAATTT 59.050 43.478 9.72 0.00 0.00 1.82
1423 2242 4.036144 GTGGCCATCTTCAGAGCTAATTTC 59.964 45.833 9.72 0.00 0.00 2.17
1427 2246 3.503827 TCTTCAGAGCTAATTTCGCGA 57.496 42.857 3.71 3.71 0.00 5.87
1452 2271 4.138290 CGCACGGATAGGATAGGATCTAT 58.862 47.826 0.00 0.00 0.00 1.98
1465 2284 2.840038 AGGATCTATGTGCTGTGGTTCA 59.160 45.455 0.00 0.00 0.00 3.18
1468 2287 1.278985 TCTATGTGCTGTGGTTCAGGG 59.721 52.381 0.00 0.00 43.78 4.45
1473 2292 1.963515 GTGCTGTGGTTCAGGGAATTT 59.036 47.619 0.00 0.00 43.78 1.82
1475 2294 1.546029 GCTGTGGTTCAGGGAATTTCC 59.454 52.381 6.91 6.91 43.78 3.13
1476 2295 2.819348 GCTGTGGTTCAGGGAATTTCCT 60.819 50.000 14.95 0.00 43.78 3.36
1478 2297 4.662278 CTGTGGTTCAGGGAATTTCCTTA 58.338 43.478 14.95 0.00 40.23 2.69
1483 2303 5.252863 TGGTTCAGGGAATTTCCTTAGATCA 59.747 40.000 14.95 0.00 36.57 2.92
1530 2350 2.396157 GGCCGTGTGGTTCCGATTC 61.396 63.158 0.00 0.00 37.67 2.52
1699 2521 2.573609 ATAGTGCCGGCGTGAGAACC 62.574 60.000 23.90 1.49 0.00 3.62
1707 2529 1.064505 CGGCGTGAGAACCGTATAAGA 59.935 52.381 0.00 0.00 44.46 2.10
1839 2662 4.581409 TGTAAGGTGTTCTAACTTTTGCCC 59.419 41.667 0.00 0.00 0.00 5.36
1856 2679 1.062587 GCCCGATGAACATTTCAGTCG 59.937 52.381 10.91 10.91 43.98 4.18
1869 2692 5.176958 ACATTTCAGTCGCACTACTAAACAC 59.823 40.000 0.00 0.00 0.00 3.32
1870 2693 3.293311 TCAGTCGCACTACTAAACACC 57.707 47.619 0.00 0.00 0.00 4.16
1891 2714 4.065789 CCAGAAGGAAGCTTTAACTCGTT 58.934 43.478 0.00 0.00 36.89 3.85
1920 2743 3.257393 CCATTCTGCACTAGACTGTCAC 58.743 50.000 10.88 0.00 35.05 3.67
1923 2746 2.316108 TCTGCACTAGACTGTCACCAA 58.684 47.619 10.88 0.00 0.00 3.67
1946 2769 7.415877 CCAATCATCACTTTCACATTGCTGATA 60.416 37.037 0.00 0.00 28.53 2.15
1951 2774 7.977789 TCACTTTCACATTGCTGATACTTTA 57.022 32.000 0.00 0.00 0.00 1.85
1958 2781 7.471721 TCACATTGCTGATACTTTATTTTCCG 58.528 34.615 0.00 0.00 0.00 4.30
1959 2782 7.335673 TCACATTGCTGATACTTTATTTTCCGA 59.664 33.333 0.00 0.00 0.00 4.55
1960 2783 7.641411 CACATTGCTGATACTTTATTTTCCGAG 59.359 37.037 0.00 0.00 0.00 4.63
1961 2784 7.552687 ACATTGCTGATACTTTATTTTCCGAGA 59.447 33.333 0.00 0.00 0.00 4.04
1962 2785 8.562892 CATTGCTGATACTTTATTTTCCGAGAT 58.437 33.333 0.00 0.00 0.00 2.75
1963 2786 8.506168 TTGCTGATACTTTATTTTCCGAGATT 57.494 30.769 0.00 0.00 0.00 2.40
1964 2787 9.607988 TTGCTGATACTTTATTTTCCGAGATTA 57.392 29.630 0.00 0.00 0.00 1.75
1965 2788 9.778741 TGCTGATACTTTATTTTCCGAGATTAT 57.221 29.630 0.00 0.00 0.00 1.28
2091 3076 5.559427 TCACCAATGACATTTAATGGTCG 57.441 39.130 9.88 4.20 42.30 4.79
2166 3151 1.815003 GTGTCCTTGGATGCTGGAAAG 59.185 52.381 1.65 0.00 0.00 2.62
2175 3160 6.154363 CCTTGGATGCTGGAAAGGTTAATTTA 59.846 38.462 0.00 0.00 35.47 1.40
2241 3231 5.181009 TGCAGTTCAGAGAATCACATTAGG 58.819 41.667 0.00 0.00 37.82 2.69
2248 3238 4.163078 CAGAGAATCACATTAGGTCACCCT 59.837 45.833 0.00 0.00 41.03 4.34
2424 3846 2.165437 GACAAACCACCTGCTTGAAACA 59.835 45.455 0.00 0.00 0.00 2.83
2615 4038 3.072915 TCAGTCATCAGTTCCACCAATGT 59.927 43.478 0.00 0.00 0.00 2.71
2679 4103 6.687604 ACTGTTGGTTTAATTTATGACTGGC 58.312 36.000 0.00 0.00 0.00 4.85
3135 4560 2.039879 TGCCTTGTTAGAGGAGGTTTCC 59.960 50.000 0.00 0.00 44.39 3.13
3252 4677 9.672673 ACATCTATTGAGTACTTAGCAACAAAT 57.327 29.630 0.00 0.00 0.00 2.32
3260 4685 7.491372 TGAGTACTTAGCAACAAATATCTTCCG 59.509 37.037 0.00 0.00 0.00 4.30
3261 4686 7.328737 AGTACTTAGCAACAAATATCTTCCGT 58.671 34.615 0.00 0.00 0.00 4.69
3262 4687 6.422776 ACTTAGCAACAAATATCTTCCGTG 57.577 37.500 0.00 0.00 0.00 4.94
3266 4691 5.250200 AGCAACAAATATCTTCCGTGGTTA 58.750 37.500 0.00 0.00 0.00 2.85
3303 4728 9.696917 GTTCAACAAATGATGAGTCCTAAATTT 57.303 29.630 0.00 0.00 38.03 1.82
3308 4733 9.696917 ACAAATGATGAGTCCTAAATTTGTTTC 57.303 29.630 13.36 0.00 42.51 2.78
3317 4742 8.056407 AGTCCTAAATTTGTTTCTATCCTTGC 57.944 34.615 0.00 0.00 0.00 4.01
3324 4750 7.631717 ATTTGTTTCTATCCTTGCCTACTTC 57.368 36.000 0.00 0.00 0.00 3.01
3325 4751 6.374417 TTGTTTCTATCCTTGCCTACTTCT 57.626 37.500 0.00 0.00 0.00 2.85
3335 4761 6.115446 TCCTTGCCTACTTCTCACATATTTG 58.885 40.000 0.00 0.00 0.00 2.32
3416 4843 3.482722 TCTCAGGTCGTACATTCGTTC 57.517 47.619 0.00 0.00 0.00 3.95
3449 4877 6.710611 GCAGAAGCTAGCTGTTAGAAAATAC 58.289 40.000 20.16 0.00 37.91 1.89
3450 4878 6.536941 GCAGAAGCTAGCTGTTAGAAAATACT 59.463 38.462 20.16 0.00 37.91 2.12
3451 4879 7.254286 GCAGAAGCTAGCTGTTAGAAAATACTC 60.254 40.741 20.16 7.06 37.91 2.59
3452 4880 7.223777 CAGAAGCTAGCTGTTAGAAAATACTCC 59.776 40.741 20.16 0.00 0.00 3.85
3453 4881 5.919755 AGCTAGCTGTTAGAAAATACTCCC 58.080 41.667 18.57 0.00 0.00 4.30
3454 4882 5.425539 AGCTAGCTGTTAGAAAATACTCCCA 59.574 40.000 18.57 0.00 0.00 4.37
3455 4883 5.524281 GCTAGCTGTTAGAAAATACTCCCAC 59.476 44.000 7.70 0.00 0.00 4.61
3456 4884 4.844884 AGCTGTTAGAAAATACTCCCACC 58.155 43.478 0.00 0.00 0.00 4.61
3457 4885 3.621715 GCTGTTAGAAAATACTCCCACCG 59.378 47.826 0.00 0.00 0.00 4.94
3458 4886 4.828829 CTGTTAGAAAATACTCCCACCGT 58.171 43.478 0.00 0.00 0.00 4.83
3459 4887 5.231702 TGTTAGAAAATACTCCCACCGTT 57.768 39.130 0.00 0.00 0.00 4.44
3460 4888 5.240121 TGTTAGAAAATACTCCCACCGTTC 58.760 41.667 0.00 0.00 0.00 3.95
3461 4889 3.345508 AGAAAATACTCCCACCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
3462 4890 2.910977 AGAAAATACTCCCACCGTTCCT 59.089 45.455 0.00 0.00 0.00 3.36
3463 4891 4.098894 AGAAAATACTCCCACCGTTCCTA 58.901 43.478 0.00 0.00 0.00 2.94
3464 4892 4.533311 AGAAAATACTCCCACCGTTCCTAA 59.467 41.667 0.00 0.00 0.00 2.69
3465 4893 4.914177 AAATACTCCCACCGTTCCTAAA 57.086 40.909 0.00 0.00 0.00 1.85
3466 4894 5.446260 AAATACTCCCACCGTTCCTAAAT 57.554 39.130 0.00 0.00 0.00 1.40
3467 4895 6.564557 AAATACTCCCACCGTTCCTAAATA 57.435 37.500 0.00 0.00 0.00 1.40
3468 4896 6.758806 AATACTCCCACCGTTCCTAAATAT 57.241 37.500 0.00 0.00 0.00 1.28
3469 4897 6.758806 ATACTCCCACCGTTCCTAAATATT 57.241 37.500 0.00 0.00 0.00 1.28
3470 4898 5.446260 ACTCCCACCGTTCCTAAATATTT 57.554 39.130 5.89 5.89 0.00 1.40
3471 4899 5.190677 ACTCCCACCGTTCCTAAATATTTG 58.809 41.667 11.05 1.40 0.00 2.32
3472 4900 5.182169 TCCCACCGTTCCTAAATATTTGT 57.818 39.130 11.05 0.00 0.00 2.83
3473 4901 5.187687 TCCCACCGTTCCTAAATATTTGTC 58.812 41.667 11.05 0.00 0.00 3.18
3474 4902 5.045432 TCCCACCGTTCCTAAATATTTGTCT 60.045 40.000 11.05 0.00 0.00 3.41
3475 4903 5.650703 CCCACCGTTCCTAAATATTTGTCTT 59.349 40.000 11.05 0.00 0.00 3.01
3476 4904 6.152154 CCCACCGTTCCTAAATATTTGTCTTT 59.848 38.462 11.05 0.00 0.00 2.52
3477 4905 7.309560 CCCACCGTTCCTAAATATTTGTCTTTT 60.310 37.037 11.05 0.00 0.00 2.27
3478 4906 8.085909 CCACCGTTCCTAAATATTTGTCTTTTT 58.914 33.333 11.05 0.00 0.00 1.94
3495 4923 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
3496 4924 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
3512 4940 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
3513 4941 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
3514 4942 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
3515 4943 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
3516 4944 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
3517 4945 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
3518 4946 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
3519 4947 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
3520 4948 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
3521 4949 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
3523 4951 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
3552 4980 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3553 4981 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3554 4982 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3555 4983 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3556 4984 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3557 4985 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3558 4986 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3559 4987 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3560 4988 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3561 4989 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3562 4990 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3563 4991 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3564 4992 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3565 4993 5.670485 TCATTTTGCTCCGTATGTAGTCAT 58.330 37.500 0.00 0.00 38.00 3.06
3566 4994 6.112734 TCATTTTGCTCCGTATGTAGTCATT 58.887 36.000 0.00 0.00 35.70 2.57
3567 4995 6.597672 TCATTTTGCTCCGTATGTAGTCATTT 59.402 34.615 0.00 0.00 35.70 2.32
3568 4996 5.794687 TTTGCTCCGTATGTAGTCATTTG 57.205 39.130 0.00 0.00 35.70 2.32
3569 4997 4.465632 TGCTCCGTATGTAGTCATTTGT 57.534 40.909 0.00 0.00 35.70 2.83
3570 4998 4.827692 TGCTCCGTATGTAGTCATTTGTT 58.172 39.130 0.00 0.00 35.70 2.83
3571 4999 4.629634 TGCTCCGTATGTAGTCATTTGTTG 59.370 41.667 0.00 0.00 35.70 3.33
3572 5000 4.868171 GCTCCGTATGTAGTCATTTGTTGA 59.132 41.667 0.00 0.00 35.70 3.18
3573 5001 5.350365 GCTCCGTATGTAGTCATTTGTTGAA 59.650 40.000 0.00 0.00 35.70 2.69
3574 5002 6.128391 GCTCCGTATGTAGTCATTTGTTGAAA 60.128 38.462 0.00 0.00 35.70 2.69
3575 5003 7.414098 GCTCCGTATGTAGTCATTTGTTGAAAT 60.414 37.037 0.00 0.00 35.70 2.17
3576 5004 7.970384 TCCGTATGTAGTCATTTGTTGAAATC 58.030 34.615 0.00 0.00 35.70 2.17
3577 5005 7.822334 TCCGTATGTAGTCATTTGTTGAAATCT 59.178 33.333 0.00 0.00 35.70 2.40
3578 5006 8.116753 CCGTATGTAGTCATTTGTTGAAATCTC 58.883 37.037 0.00 0.00 35.70 2.75
3579 5007 8.873830 CGTATGTAGTCATTTGTTGAAATCTCT 58.126 33.333 0.00 0.00 35.70 3.10
3607 5035 8.581253 AAAGACAAATATTTAGGAACAGAGGG 57.419 34.615 0.00 0.00 0.00 4.30
3608 5036 7.510675 AGACAAATATTTAGGAACAGAGGGA 57.489 36.000 0.00 0.00 0.00 4.20
3609 5037 7.569240 AGACAAATATTTAGGAACAGAGGGAG 58.431 38.462 0.00 0.00 0.00 4.30
3610 5038 7.182930 AGACAAATATTTAGGAACAGAGGGAGT 59.817 37.037 0.00 0.00 0.00 3.85
3611 5039 8.388656 ACAAATATTTAGGAACAGAGGGAGTA 57.611 34.615 0.00 0.00 0.00 2.59
3666 5094 8.722480 TTGTCTTGTTCTACATATCTTGGATG 57.278 34.615 0.00 0.00 0.00 3.51
3755 5184 2.790433 GGTCCATGTTTAGCAAGACCA 58.210 47.619 13.79 0.00 46.03 4.02
3756 5185 2.749621 GGTCCATGTTTAGCAAGACCAG 59.250 50.000 13.79 0.00 46.03 4.00
3767 5196 2.104792 AGCAAGACCAGCAGAAACTGTA 59.895 45.455 0.00 0.00 35.83 2.74
3768 5197 2.481952 GCAAGACCAGCAGAAACTGTAG 59.518 50.000 0.00 0.00 35.83 2.74
3769 5198 3.803715 GCAAGACCAGCAGAAACTGTAGA 60.804 47.826 0.00 0.00 35.83 2.59
3770 5199 4.380531 CAAGACCAGCAGAAACTGTAGAA 58.619 43.478 0.00 0.00 35.83 2.10
3879 5340 7.556275 TGTAAATTCTCATACCCACCAAAGATC 59.444 37.037 0.00 0.00 0.00 2.75
3880 5341 5.983333 ATTCTCATACCCACCAAAGATCT 57.017 39.130 0.00 0.00 0.00 2.75
3881 5342 5.779241 TTCTCATACCCACCAAAGATCTT 57.221 39.130 0.88 0.88 0.00 2.40
3882 5343 5.359194 TCTCATACCCACCAAAGATCTTC 57.641 43.478 8.78 0.00 0.00 2.87
3883 5344 4.782691 TCTCATACCCACCAAAGATCTTCA 59.217 41.667 8.78 0.00 0.00 3.02
3884 5345 5.429762 TCTCATACCCACCAAAGATCTTCAT 59.570 40.000 8.78 0.00 0.00 2.57
3885 5346 6.615316 TCTCATACCCACCAAAGATCTTCATA 59.385 38.462 8.78 0.00 0.00 2.15
3886 5347 7.127186 TCTCATACCCACCAAAGATCTTCATAA 59.873 37.037 8.78 0.00 0.00 1.90
3887 5348 7.638444 TCATACCCACCAAAGATCTTCATAAA 58.362 34.615 8.78 0.00 0.00 1.40
3888 5349 7.556275 TCATACCCACCAAAGATCTTCATAAAC 59.444 37.037 8.78 0.00 0.00 2.01
3889 5350 5.892348 ACCCACCAAAGATCTTCATAAACT 58.108 37.500 8.78 0.00 0.00 2.66
3890 5351 5.946377 ACCCACCAAAGATCTTCATAAACTC 59.054 40.000 8.78 0.00 0.00 3.01
3891 5352 5.358160 CCCACCAAAGATCTTCATAAACTCC 59.642 44.000 8.78 0.00 0.00 3.85
3892 5353 5.358160 CCACCAAAGATCTTCATAAACTCCC 59.642 44.000 8.78 0.00 0.00 4.30
3893 5354 5.358160 CACCAAAGATCTTCATAAACTCCCC 59.642 44.000 8.78 0.00 0.00 4.81
4394 5855 2.816087 CCAACCAATCACTGTTGAGAGG 59.184 50.000 4.08 0.00 43.50 3.69
4395 5856 2.816087 CAACCAATCACTGTTGAGAGGG 59.184 50.000 0.00 0.00 43.50 4.30
4396 5857 2.338809 ACCAATCACTGTTGAGAGGGA 58.661 47.619 0.00 0.00 35.07 4.20
4397 5858 2.711009 ACCAATCACTGTTGAGAGGGAA 59.289 45.455 0.00 0.00 35.07 3.97
4398 5859 3.077359 CCAATCACTGTTGAGAGGGAAC 58.923 50.000 0.00 0.00 34.35 3.62
4399 5860 3.244700 CCAATCACTGTTGAGAGGGAACT 60.245 47.826 0.00 0.00 37.09 3.01
4400 5861 4.020218 CCAATCACTGTTGAGAGGGAACTA 60.020 45.833 0.00 0.00 35.01 2.24
4401 5862 4.810191 ATCACTGTTGAGAGGGAACTAC 57.190 45.455 0.00 0.00 35.01 2.73
4402 5863 3.572642 TCACTGTTGAGAGGGAACTACA 58.427 45.455 0.00 0.00 44.43 2.74
4403 5864 3.321111 TCACTGTTGAGAGGGAACTACAC 59.679 47.826 0.00 0.00 44.43 2.90
4404 5865 3.322254 CACTGTTGAGAGGGAACTACACT 59.678 47.826 0.00 0.00 44.43 3.55
4405 5866 4.523173 CACTGTTGAGAGGGAACTACACTA 59.477 45.833 0.00 0.00 44.43 2.74
4406 5867 5.010719 CACTGTTGAGAGGGAACTACACTAA 59.989 44.000 0.00 0.00 44.43 2.24
4407 5868 5.010820 ACTGTTGAGAGGGAACTACACTAAC 59.989 44.000 0.00 0.00 44.43 2.34
4408 5869 4.282703 TGTTGAGAGGGAACTACACTAACC 59.717 45.833 0.00 0.00 44.43 2.85
4409 5870 4.122337 TGAGAGGGAACTACACTAACCA 57.878 45.455 0.00 0.00 44.43 3.67
4410 5871 3.830755 TGAGAGGGAACTACACTAACCAC 59.169 47.826 0.00 0.00 44.43 4.16
4411 5872 3.171528 AGAGGGAACTACACTAACCACC 58.828 50.000 0.00 0.00 44.43 4.61
4412 5873 2.901839 GAGGGAACTACACTAACCACCA 59.098 50.000 0.00 0.00 44.43 4.17
4413 5874 2.636403 AGGGAACTACACTAACCACCAC 59.364 50.000 0.00 0.00 40.61 4.16
4414 5875 2.611224 GGGAACTACACTAACCACCACG 60.611 54.545 0.00 0.00 0.00 4.94
4415 5876 2.064014 GAACTACACTAACCACCACGC 58.936 52.381 0.00 0.00 0.00 5.34
4416 5877 0.319405 ACTACACTAACCACCACGCC 59.681 55.000 0.00 0.00 0.00 5.68
4417 5878 0.319083 CTACACTAACCACCACGCCA 59.681 55.000 0.00 0.00 0.00 5.69
4418 5879 0.757512 TACACTAACCACCACGCCAA 59.242 50.000 0.00 0.00 0.00 4.52
4419 5880 0.816421 ACACTAACCACCACGCCAAC 60.816 55.000 0.00 0.00 0.00 3.77
4420 5881 1.228033 ACTAACCACCACGCCAACC 60.228 57.895 0.00 0.00 0.00 3.77
4421 5882 1.072505 CTAACCACCACGCCAACCT 59.927 57.895 0.00 0.00 0.00 3.50
4422 5883 1.228003 TAACCACCACGCCAACCTG 60.228 57.895 0.00 0.00 0.00 4.00
4423 5884 1.985460 TAACCACCACGCCAACCTGT 61.985 55.000 0.00 0.00 0.00 4.00
4424 5885 2.978010 CCACCACGCCAACCTGTC 60.978 66.667 0.00 0.00 0.00 3.51
4425 5886 3.345808 CACCACGCCAACCTGTCG 61.346 66.667 0.00 0.00 0.00 4.35
4432 5893 4.410400 CCAACCTGTCGCCCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
4433 5894 3.636231 CAACCTGTCGCCCCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
4434 5895 3.322466 AACCTGTCGCCCCTCCAG 61.322 66.667 0.00 0.00 0.00 3.86
4439 5900 4.344865 GTCGCCCCTCCAGCCAAA 62.345 66.667 0.00 0.00 0.00 3.28
4440 5901 4.344865 TCGCCCCTCCAGCCAAAC 62.345 66.667 0.00 0.00 0.00 2.93
4441 5902 4.659172 CGCCCCTCCAGCCAAACA 62.659 66.667 0.00 0.00 0.00 2.83
4442 5903 2.991540 GCCCCTCCAGCCAAACAC 60.992 66.667 0.00 0.00 0.00 3.32
4443 5904 2.520458 CCCCTCCAGCCAAACACA 59.480 61.111 0.00 0.00 0.00 3.72
4444 5905 1.903404 CCCCTCCAGCCAAACACAC 60.903 63.158 0.00 0.00 0.00 3.82
4445 5906 1.903404 CCCTCCAGCCAAACACACC 60.903 63.158 0.00 0.00 0.00 4.16
4446 5907 1.903404 CCTCCAGCCAAACACACCC 60.903 63.158 0.00 0.00 0.00 4.61
4447 5908 1.152777 CTCCAGCCAAACACACCCA 60.153 57.895 0.00 0.00 0.00 4.51
4448 5909 0.540365 CTCCAGCCAAACACACCCAT 60.540 55.000 0.00 0.00 0.00 4.00
4449 5910 0.827089 TCCAGCCAAACACACCCATG 60.827 55.000 0.00 0.00 0.00 3.66
4450 5911 1.667151 CAGCCAAACACACCCATGG 59.333 57.895 4.14 4.14 36.00 3.66
4451 5912 1.533753 AGCCAAACACACCCATGGG 60.534 57.895 30.23 30.23 42.03 4.00
4472 5933 7.610580 TGGGTTTCCAATTTTATGTTCTTCT 57.389 32.000 0.00 0.00 40.73 2.85
4473 5934 8.028652 TGGGTTTCCAATTTTATGTTCTTCTT 57.971 30.769 0.00 0.00 40.73 2.52
4474 5935 8.147704 TGGGTTTCCAATTTTATGTTCTTCTTC 58.852 33.333 0.00 0.00 40.73 2.87
4475 5936 8.147704 GGGTTTCCAATTTTATGTTCTTCTTCA 58.852 33.333 0.00 0.00 0.00 3.02
4476 5937 9.710900 GGTTTCCAATTTTATGTTCTTCTTCAT 57.289 29.630 0.00 0.00 0.00 2.57
4481 5942 9.815936 CCAATTTTATGTTCTTCTTCATTTTGC 57.184 29.630 0.00 0.00 0.00 3.68
4486 5947 9.545105 TTTATGTTCTTCTTCATTTTGCATTGT 57.455 25.926 0.00 0.00 0.00 2.71
4487 5948 7.647907 ATGTTCTTCTTCATTTTGCATTGTC 57.352 32.000 0.00 0.00 0.00 3.18
4488 5949 5.686841 TGTTCTTCTTCATTTTGCATTGTCG 59.313 36.000 0.00 0.00 0.00 4.35
4489 5950 5.687770 TCTTCTTCATTTTGCATTGTCGA 57.312 34.783 0.00 0.00 0.00 4.20
4490 5951 5.692814 TCTTCTTCATTTTGCATTGTCGAG 58.307 37.500 0.00 0.00 0.00 4.04
4491 5952 5.469760 TCTTCTTCATTTTGCATTGTCGAGA 59.530 36.000 0.00 0.00 0.00 4.04
4492 5953 5.885230 TCTTCATTTTGCATTGTCGAGAT 57.115 34.783 0.00 0.00 0.00 2.75
4493 5954 5.872635 TCTTCATTTTGCATTGTCGAGATC 58.127 37.500 0.00 0.00 0.00 2.75
4494 5955 5.412286 TCTTCATTTTGCATTGTCGAGATCA 59.588 36.000 0.00 0.00 0.00 2.92
4495 5956 5.225899 TCATTTTGCATTGTCGAGATCAG 57.774 39.130 0.00 0.00 0.00 2.90
4496 5957 4.937015 TCATTTTGCATTGTCGAGATCAGA 59.063 37.500 0.00 0.00 0.00 3.27
4497 5958 5.587443 TCATTTTGCATTGTCGAGATCAGAT 59.413 36.000 0.00 0.00 0.00 2.90
4498 5959 6.762661 TCATTTTGCATTGTCGAGATCAGATA 59.237 34.615 0.00 0.00 0.00 1.98
4499 5960 7.443272 TCATTTTGCATTGTCGAGATCAGATAT 59.557 33.333 0.00 0.00 0.00 1.63
4500 5961 8.715088 CATTTTGCATTGTCGAGATCAGATATA 58.285 33.333 0.00 0.00 0.00 0.86
4501 5962 8.837788 TTTTGCATTGTCGAGATCAGATATAT 57.162 30.769 0.00 0.00 0.00 0.86
4502 5963 9.927668 TTTTGCATTGTCGAGATCAGATATATA 57.072 29.630 0.00 0.00 0.00 0.86
4503 5964 9.578439 TTTGCATTGTCGAGATCAGATATATAG 57.422 33.333 0.00 0.00 0.00 1.31
4504 5965 8.286191 TGCATTGTCGAGATCAGATATATAGT 57.714 34.615 0.00 0.00 0.00 2.12
4505 5966 8.186821 TGCATTGTCGAGATCAGATATATAGTG 58.813 37.037 0.00 0.00 0.00 2.74
4506 5967 7.167302 GCATTGTCGAGATCAGATATATAGTGC 59.833 40.741 0.00 0.00 0.00 4.40
4507 5968 7.687941 TTGTCGAGATCAGATATATAGTGCA 57.312 36.000 0.00 0.00 0.00 4.57
4508 5969 7.872113 TGTCGAGATCAGATATATAGTGCAT 57.128 36.000 0.00 0.00 0.00 3.96
4509 5970 8.964476 TGTCGAGATCAGATATATAGTGCATA 57.036 34.615 0.00 0.00 0.00 3.14
4510 5971 9.396022 TGTCGAGATCAGATATATAGTGCATAA 57.604 33.333 0.00 0.00 0.00 1.90
4547 6008 0.729116 CAGTCCAACATTGCTAGCCG 59.271 55.000 13.29 3.12 0.00 5.52
4558 6019 1.067582 GCTAGCCGCGTTACTCCAT 59.932 57.895 2.29 0.00 0.00 3.41
4560 6021 0.597637 CTAGCCGCGTTACTCCATGG 60.598 60.000 4.97 4.97 0.00 3.66
4589 6050 5.013391 AGGTTGATCATTTCTTGGGCATTTT 59.987 36.000 0.00 0.00 0.00 1.82
4607 6068 5.005394 GCATTTTGCAAAGTCTAGCATCATG 59.995 40.000 12.41 9.90 44.26 3.07
4622 6088 5.114780 AGCATCATGACTTGTACTGATCAC 58.885 41.667 0.00 0.00 0.00 3.06
4638 6104 9.926751 GTACTGATCACTGAAACATCAATTATG 57.073 33.333 0.00 0.00 41.74 1.90
4640 6106 6.488817 TGATCACTGAAACATCAATTATGCG 58.511 36.000 0.00 0.00 39.39 4.73
4643 6109 7.371126 TCACTGAAACATCAATTATGCGTTA 57.629 32.000 0.00 0.00 39.39 3.18
4680 6146 7.014518 CCATTTAATTGTGCATCCTGGAATAGA 59.985 37.037 0.00 0.00 0.00 1.98
4692 6158 5.538877 TCCTGGAATAGAACTGATAAGGGT 58.461 41.667 0.00 0.00 0.00 4.34
5072 6541 0.176680 CGAGAGCTGTGCACCCTATT 59.823 55.000 15.69 2.87 0.00 1.73
5150 6622 2.285368 TCCCTCTCCGCCATTGGT 60.285 61.111 4.26 0.00 0.00 3.67
5219 6691 3.067461 CAGATACTGTACAGGTGAGCTCC 59.933 52.174 26.12 2.19 0.00 4.70
5282 6765 2.159476 GCTGTGTGCATCCTTATGTGTG 60.159 50.000 0.00 0.00 42.31 3.82
5302 6786 3.085533 TGCTGCCGGTACACATTTTTAT 58.914 40.909 1.90 0.00 0.00 1.40
5457 6955 6.097839 AGTTGCAGGATTTTATGAGAATGCAT 59.902 34.615 0.00 0.00 41.56 3.96
5466 6964 8.624701 ATTTTATGAGAATGCATGACTTTTCG 57.375 30.769 0.00 0.00 0.00 3.46
5551 7049 4.387026 TGGAAACCATCTGGATGAACTT 57.613 40.909 11.66 2.74 41.20 2.66
5562 7060 4.997395 TCTGGATGAACTTCCTTTCTTTCG 59.003 41.667 7.94 0.00 36.68 3.46
5571 7069 7.597743 TGAACTTCCTTTCTTTCGAGTACATAC 59.402 37.037 0.00 0.00 0.00 2.39
5594 7095 6.143915 ACCAGGATACCATGTACTTGACTAT 58.856 40.000 10.20 4.88 37.17 2.12
5595 7096 6.042093 ACCAGGATACCATGTACTTGACTATG 59.958 42.308 10.20 0.00 37.17 2.23
5596 7097 6.042093 CCAGGATACCATGTACTTGACTATGT 59.958 42.308 10.20 2.29 37.17 2.29
5622 7123 2.660236 GTGCTACCTCTAAACGTTCACG 59.340 50.000 0.00 0.00 46.33 4.35
5660 7161 2.030007 CCAAGCACCATTGTGTTACTGG 60.030 50.000 0.00 0.00 44.65 4.00
5669 7170 6.429692 CACCATTGTGTTACTGGAATCTAACA 59.570 38.462 0.00 0.00 37.72 2.41
5693 7194 7.859598 CAAATGAGCTTTGGATGTAGTAGATC 58.140 38.462 0.00 0.00 40.52 2.75
5709 7210 6.890979 AGTAGATCATCATCGACATGAGAA 57.109 37.500 12.99 1.27 42.53 2.87
5710 7211 7.282332 AGTAGATCATCATCGACATGAGAAA 57.718 36.000 12.99 0.99 42.53 2.52
5720 7221 3.131223 TCGACATGAGAAATCAGGAGGTC 59.869 47.826 0.00 0.00 0.00 3.85
5805 7307 4.141914 TGCCCGTTGTTAAAACTGGAAAAT 60.142 37.500 0.00 0.00 0.00 1.82
5817 7344 9.771534 TTAAAACTGGAAAATAATTCCCTTGTG 57.228 29.630 4.86 0.00 37.79 3.33
5845 7372 4.298332 CGGAAAAGAACAACTTTCCATGG 58.702 43.478 4.97 4.97 46.55 3.66
5846 7373 4.631131 GGAAAAGAACAACTTTCCATGGG 58.369 43.478 13.02 0.00 46.55 4.00
5847 7374 4.100963 GGAAAAGAACAACTTTCCATGGGT 59.899 41.667 13.02 0.00 46.55 4.51
5848 7375 4.670896 AAAGAACAACTTTCCATGGGTG 57.329 40.909 13.02 4.96 44.36 4.61
5849 7376 3.387699 AAAGAACAACTTTCCATGGGTGG 59.612 43.478 13.02 1.84 44.36 4.61
5850 7377 1.618343 GAACAACTTTCCATGGGTGGG 59.382 52.381 13.02 2.72 46.06 4.61
5851 7378 0.560688 ACAACTTTCCATGGGTGGGT 59.439 50.000 13.02 3.38 46.06 4.51
5853 7380 0.178935 AACTTTCCATGGGTGGGTGG 60.179 55.000 13.02 0.00 46.06 4.61
5916 7449 1.966451 GACTTGGGAAGTGTGGGCG 60.966 63.158 0.00 0.00 43.03 6.13
5993 7526 3.797353 CGCCTAGCCCCACCATGT 61.797 66.667 0.00 0.00 0.00 3.21
6121 7654 4.081642 TCAGTAGTCCAGTGCTAAATGTCC 60.082 45.833 0.00 0.00 0.00 4.02
6199 7732 0.843309 TTTGTCACCCTCTTCCAGCA 59.157 50.000 0.00 0.00 0.00 4.41
6212 7745 1.795768 TCCAGCAGACGTGTTTGATC 58.204 50.000 0.00 0.00 0.00 2.92
6213 7746 1.344438 TCCAGCAGACGTGTTTGATCT 59.656 47.619 0.00 0.00 0.00 2.75
6214 7747 2.560981 TCCAGCAGACGTGTTTGATCTA 59.439 45.455 0.00 0.00 0.00 1.98
6299 7832 2.979676 ACGACGCACACGGACCTA 60.980 61.111 0.00 0.00 46.04 3.08
6433 7966 2.434884 CTGATGCCGCAACTCCGT 60.435 61.111 0.00 0.00 0.00 4.69
6434 7967 2.031919 TGATGCCGCAACTCCGTT 59.968 55.556 0.00 0.00 0.00 4.44
6435 7968 2.244436 CTGATGCCGCAACTCCGTTG 62.244 60.000 0.00 2.51 45.24 4.10
6436 7969 3.039202 GATGCCGCAACTCCGTTGG 62.039 63.158 0.00 0.00 42.99 3.77
6437 7970 3.545124 ATGCCGCAACTCCGTTGGA 62.545 57.895 0.00 0.00 42.99 3.53
6438 7971 2.746277 GCCGCAACTCCGTTGGAT 60.746 61.111 8.60 0.00 42.99 3.41
6439 7972 2.750888 GCCGCAACTCCGTTGGATC 61.751 63.158 8.60 0.00 42.99 3.36
6440 7973 2.452813 CCGCAACTCCGTTGGATCG 61.453 63.158 8.60 4.15 42.99 3.69
6464 7997 0.532573 TCTCGGTCTCCAACTGATGC 59.467 55.000 0.00 0.00 42.44 3.91
6465 7998 0.460987 CTCGGTCTCCAACTGATGCC 60.461 60.000 0.00 0.00 42.44 4.40
6469 8002 1.375908 TCTCCAACTGATGCCGCAC 60.376 57.895 0.00 0.00 0.00 5.34
6473 8006 2.045926 AACTGATGCCGCACCTCC 60.046 61.111 0.00 0.00 0.00 4.30
6555 8093 3.510719 CCGGACCTATAAACGAAACGAA 58.489 45.455 0.00 0.00 0.00 3.85
6556 8094 3.925913 CCGGACCTATAAACGAAACGAAA 59.074 43.478 0.00 0.00 0.00 3.46
6557 8095 4.388469 CCGGACCTATAAACGAAACGAAAA 59.612 41.667 0.00 0.00 0.00 2.29
6558 8096 5.445010 CCGGACCTATAAACGAAACGAAAAG 60.445 44.000 0.00 0.00 0.00 2.27
6603 8144 5.221106 GCTGCACCTCATTCAATAAAGCATA 60.221 40.000 0.00 0.00 0.00 3.14
6641 8182 3.764972 TCCTTTTTCCTTTTCACCGTGTT 59.235 39.130 0.00 0.00 0.00 3.32
6723 8270 2.660064 GGGCTGGACCGAGTCATGT 61.660 63.158 6.41 0.00 40.62 3.21
6726 8273 0.737715 GCTGGACCGAGTCATGTGTC 60.738 60.000 6.41 0.00 33.68 3.67
6744 8291 1.669115 CCACTCACTCGGCAGTTGG 60.669 63.158 0.00 0.00 0.00 3.77
6760 8307 6.018669 CGGCAGTTGGTAATTATCTTCTCTTC 60.019 42.308 0.00 0.00 0.00 2.87
6803 8358 1.595328 TGTTTCCGTGTCATGTGAACG 59.405 47.619 9.56 9.56 37.07 3.95
6895 8461 3.134458 GGAGTGAAGTGTGAGGAAACTG 58.866 50.000 0.00 0.00 44.43 3.16
6973 8551 2.911509 TGCTGCCGTTTGGTGCAT 60.912 55.556 0.00 0.00 40.23 3.96
7149 8892 2.640581 GAAATGGGGACGGGGGATGG 62.641 65.000 0.00 0.00 0.00 3.51
7187 8930 4.612412 GTGCCGTCGTGTTCCCCA 62.612 66.667 0.00 0.00 0.00 4.96
7213 8956 6.335777 GCTTCTGGTTGAAAATATGAGCAAT 58.664 36.000 0.00 0.00 33.79 3.56
7217 8960 9.638239 TTCTGGTTGAAAATATGAGCAATTTAC 57.362 29.630 0.00 0.00 0.00 2.01
7219 8962 7.032580 TGGTTGAAAATATGAGCAATTTACCG 58.967 34.615 0.00 0.00 30.25 4.02
7223 8966 9.729023 TTGAAAATATGAGCAATTTACCGTATG 57.271 29.630 0.00 0.00 0.00 2.39
7279 9022 8.166422 TGACTATTATAGCAGAGATGAAACGA 57.834 34.615 0.00 0.00 0.00 3.85
7280 9023 8.293157 TGACTATTATAGCAGAGATGAAACGAG 58.707 37.037 0.00 0.00 0.00 4.18
7281 9024 8.172352 ACTATTATAGCAGAGATGAAACGAGT 57.828 34.615 0.00 0.00 0.00 4.18
7282 9025 8.293867 ACTATTATAGCAGAGATGAAACGAGTC 58.706 37.037 0.00 0.00 0.00 3.36
7283 9026 4.991153 ATAGCAGAGATGAAACGAGTCA 57.009 40.909 0.00 0.00 0.00 3.41
7296 9039 7.812309 TGAAACGAGTCATGTAATCTAACAG 57.188 36.000 0.00 0.00 31.70 3.16
7303 9046 7.855409 CGAGTCATGTAATCTAACAGAGAGAAG 59.145 40.741 0.00 0.00 37.70 2.85
7304 9047 8.815565 AGTCATGTAATCTAACAGAGAGAAGA 57.184 34.615 0.00 0.00 37.70 2.87
7336 9079 6.679638 GCATCTGCACATGTGAAATAGAACAT 60.680 38.462 29.80 8.79 41.59 2.71
7339 9082 7.751732 TCTGCACATGTGAAATAGAACATAAC 58.248 34.615 29.80 6.70 35.28 1.89
7409 9152 5.235616 ACAAAAGGTACATGAACACGTACTG 59.764 40.000 0.00 4.57 38.42 2.74
7430 9173 2.184322 TGCGGCTGTAGCAGTAGC 59.816 61.111 6.18 6.14 44.36 3.58
7452 9195 1.885850 GGCGTTGACGTTGTCACCT 60.886 57.895 5.36 0.00 42.60 4.00
7453 9196 1.275657 GCGTTGACGTTGTCACCTG 59.724 57.895 5.36 0.00 42.60 4.00
7460 9203 1.326548 GACGTTGTCACCTGTGTTGTC 59.673 52.381 0.00 0.00 32.09 3.18
7487 9230 4.753541 GTCGACGACGGGTAAGAC 57.246 61.111 12.94 0.00 40.21 3.01
7517 9260 0.169894 GGGAAGTAGTCGTCGGTGTC 59.830 60.000 0.00 0.00 0.00 3.67
7518 9261 0.169894 GGAAGTAGTCGTCGGTGTCC 59.830 60.000 0.00 0.00 0.00 4.02
7541 9284 1.822990 GGTGTCCGTGATGAAGAGGTA 59.177 52.381 0.00 0.00 0.00 3.08
7550 9293 4.352887 GTGATGAAGAGGTAAGTAGTCGC 58.647 47.826 0.00 0.00 0.00 5.19
7551 9294 3.064958 TGATGAAGAGGTAAGTAGTCGCG 59.935 47.826 0.00 0.00 0.00 5.87
7552 9295 1.131883 TGAAGAGGTAAGTAGTCGCGC 59.868 52.381 0.00 0.00 0.00 6.86
7553 9296 1.131883 GAAGAGGTAAGTAGTCGCGCA 59.868 52.381 8.75 0.00 0.00 6.09
7554 9297 0.733729 AGAGGTAAGTAGTCGCGCAG 59.266 55.000 8.75 0.00 0.00 5.18
7555 9298 0.731417 GAGGTAAGTAGTCGCGCAGA 59.269 55.000 8.75 2.49 0.00 4.26
7556 9299 0.733729 AGGTAAGTAGTCGCGCAGAG 59.266 55.000 8.75 0.00 0.00 3.35
7557 9300 0.866483 GGTAAGTAGTCGCGCAGAGC 60.866 60.000 8.75 1.44 43.95 4.09
7568 9311 2.672996 GCAGAGCGCTCCCCAAAA 60.673 61.111 32.94 0.00 37.77 2.44
7569 9312 2.268076 GCAGAGCGCTCCCCAAAAA 61.268 57.895 32.94 0.00 37.77 1.94
7570 9313 1.581447 CAGAGCGCTCCCCAAAAAC 59.419 57.895 32.94 6.30 0.00 2.43
7571 9314 1.603739 AGAGCGCTCCCCAAAAACC 60.604 57.895 32.94 5.48 0.00 3.27
7572 9315 1.603739 GAGCGCTCCCCAAAAACCT 60.604 57.895 27.22 0.00 0.00 3.50
7573 9316 1.152546 AGCGCTCCCCAAAAACCTT 60.153 52.632 2.64 0.00 0.00 3.50
7574 9317 0.111639 AGCGCTCCCCAAAAACCTTA 59.888 50.000 2.64 0.00 0.00 2.69
7575 9318 1.182667 GCGCTCCCCAAAAACCTTAT 58.817 50.000 0.00 0.00 0.00 1.73
7576 9319 1.134367 GCGCTCCCCAAAAACCTTATC 59.866 52.381 0.00 0.00 0.00 1.75
7577 9320 2.442413 CGCTCCCCAAAAACCTTATCA 58.558 47.619 0.00 0.00 0.00 2.15
7578 9321 2.163613 CGCTCCCCAAAAACCTTATCAC 59.836 50.000 0.00 0.00 0.00 3.06
7579 9322 2.496070 GCTCCCCAAAAACCTTATCACC 59.504 50.000 0.00 0.00 0.00 4.02
7580 9323 3.096852 CTCCCCAAAAACCTTATCACCC 58.903 50.000 0.00 0.00 0.00 4.61
7581 9324 2.725227 TCCCCAAAAACCTTATCACCCT 59.275 45.455 0.00 0.00 0.00 4.34
7582 9325 3.143168 TCCCCAAAAACCTTATCACCCTT 59.857 43.478 0.00 0.00 0.00 3.95
7583 9326 3.513912 CCCCAAAAACCTTATCACCCTTC 59.486 47.826 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.787280 CTCGGCCCTCCACCCTCT 62.787 72.222 0.00 0.00 0.00 3.69
43 44 4.343323 CCACGGGCATCACCACCA 62.343 66.667 0.00 0.00 42.05 4.17
56 57 0.670546 AGAGAAATGCGACACCCACG 60.671 55.000 0.00 0.00 0.00 4.94
89 90 1.489560 AAAGGGGTGGAAGAGGACCG 61.490 60.000 0.00 0.00 32.48 4.79
108 109 1.133915 GGTTTTCACCCCAGAGTGTCA 60.134 52.381 0.00 0.00 38.91 3.58
109 110 1.143073 AGGTTTTCACCCCAGAGTGTC 59.857 52.381 0.00 0.00 45.63 3.67
110 111 1.222567 AGGTTTTCACCCCAGAGTGT 58.777 50.000 0.00 0.00 45.63 3.55
113 114 1.523758 CGAAGGTTTTCACCCCAGAG 58.476 55.000 0.00 0.00 45.63 3.35
117 118 4.494515 AGCGAAGGTTTTCACCCC 57.505 55.556 0.00 0.00 45.63 4.95
131 132 2.170985 CGTCCGTCAAAGCAAGCG 59.829 61.111 0.00 0.00 0.00 4.68
133 134 1.569493 CCACGTCCGTCAAAGCAAG 59.431 57.895 0.00 0.00 0.00 4.01
136 137 4.072088 CGCCACGTCCGTCAAAGC 62.072 66.667 0.00 0.00 0.00 3.51
183 185 2.588877 CACATCGATGACGCCCCC 60.589 66.667 31.33 0.00 39.58 5.40
190 192 1.073125 ACCCACCAAACACATCGATGA 59.927 47.619 31.33 0.00 0.00 2.92
200 202 0.466739 AGGACCGAAACCCACCAAAC 60.467 55.000 0.00 0.00 0.00 2.93
202 204 1.149627 CAGGACCGAAACCCACCAA 59.850 57.895 0.00 0.00 0.00 3.67
209 211 1.012486 ATTCGTCGCAGGACCGAAAC 61.012 55.000 0.00 0.00 40.17 2.78
218 220 1.556958 CGCATGAGATTCGTCGCAG 59.443 57.895 0.00 0.00 0.00 5.18
223 225 1.565305 GAGAAGCGCATGAGATTCGT 58.435 50.000 19.43 9.75 41.00 3.85
227 229 1.068895 CTGAGGAGAAGCGCATGAGAT 59.931 52.381 11.47 0.00 0.00 2.75
228 230 0.459078 CTGAGGAGAAGCGCATGAGA 59.541 55.000 11.47 0.00 0.00 3.27
229 231 0.175302 ACTGAGGAGAAGCGCATGAG 59.825 55.000 11.47 0.00 0.00 2.90
262 264 1.740585 CACACCAAAGACGTGGAAACA 59.259 47.619 0.00 0.00 41.65 2.83
300 302 9.260002 GAAATCCTCAAAAGCAGATAACAAAAA 57.740 29.630 0.00 0.00 0.00 1.94
301 303 7.872483 GGAAATCCTCAAAAGCAGATAACAAAA 59.128 33.333 0.00 0.00 0.00 2.44
305 307 6.765915 AGGAAATCCTCAAAAGCAGATAAC 57.234 37.500 0.00 0.00 44.77 1.89
323 325 6.484288 ACAAGGATACATGATGTTGAGGAAA 58.516 36.000 2.29 0.00 37.52 3.13
325 327 5.698741 ACAAGGATACATGATGTTGAGGA 57.301 39.130 2.29 0.00 37.52 3.71
326 328 5.007039 CGAACAAGGATACATGATGTTGAGG 59.993 44.000 2.29 0.00 37.52 3.86
367 369 3.307480 GGCTCACACCCCGCTTTATATAT 60.307 47.826 0.00 0.00 0.00 0.86
369 371 1.202770 GGCTCACACCCCGCTTTATAT 60.203 52.381 0.00 0.00 0.00 0.86
370 372 0.179468 GGCTCACACCCCGCTTTATA 59.821 55.000 0.00 0.00 0.00 0.98
387 393 2.432628 CGACTTCACGGACCAGGC 60.433 66.667 0.00 0.00 0.00 4.85
388 394 2.432628 GCGACTTCACGGACCAGG 60.433 66.667 0.00 0.00 0.00 4.45
429 435 7.898946 CAAAATTTTGTCTTGGTGACTTCTTC 58.101 34.615 20.57 0.00 45.54 2.87
564 570 4.612264 AGATGCTCCAAAATGCTTTTGT 57.388 36.364 15.52 2.69 46.53 2.83
617 623 6.573664 TTGTGAAGGTTCATCACTAAATGG 57.426 37.500 8.01 0.00 45.81 3.16
621 627 4.713553 TGCTTGTGAAGGTTCATCACTAA 58.286 39.130 8.01 1.39 45.81 2.24
632 638 3.143807 TGTTTTCGTTGCTTGTGAAGG 57.856 42.857 0.00 0.00 0.00 3.46
669 675 4.510303 AGTAATATGGATGGGAGGGAGT 57.490 45.455 0.00 0.00 0.00 3.85
747 755 3.906008 CGCGTGGACAGTAAAATTGAAAG 59.094 43.478 0.00 0.00 0.00 2.62
848 1648 6.099341 CAGCAACCAAACTACTTGACTTTTT 58.901 36.000 0.00 0.00 37.17 1.94
1049 1860 2.452295 TGCTGCTTTCTCTCTCTGTG 57.548 50.000 0.00 0.00 0.00 3.66
1051 1862 2.678836 CCATTGCTGCTTTCTCTCTCTG 59.321 50.000 0.00 0.00 0.00 3.35
1053 1864 2.937799 CTCCATTGCTGCTTTCTCTCTC 59.062 50.000 0.00 0.00 0.00 3.20
1347 2166 1.604185 CGGGAGCTAGTAATGAGCAGC 60.604 57.143 0.00 0.00 42.69 5.25
1386 2205 3.353029 CCACCGCACATGACGCAA 61.353 61.111 0.00 0.00 0.00 4.85
1390 2209 2.751436 ATGGCCACCGCACATGAC 60.751 61.111 8.16 0.00 36.38 3.06
1391 2210 2.438254 GATGGCCACCGCACATGA 60.438 61.111 8.16 0.00 36.38 3.07
1392 2211 1.996786 GAAGATGGCCACCGCACATG 61.997 60.000 8.16 0.00 36.38 3.21
1393 2212 1.750399 GAAGATGGCCACCGCACAT 60.750 57.895 8.16 0.00 36.38 3.21
1394 2213 2.359850 GAAGATGGCCACCGCACA 60.360 61.111 8.16 0.00 36.38 4.57
1395 2214 2.359850 TGAAGATGGCCACCGCAC 60.360 61.111 8.16 0.00 36.38 5.34
1396 2215 2.046023 CTGAAGATGGCCACCGCA 60.046 61.111 8.16 0.39 36.38 5.69
1402 2221 3.249559 CGAAATTAGCTCTGAAGATGGCC 59.750 47.826 0.00 0.00 0.00 5.36
1412 2231 2.288969 GCGTCGCGAAATTAGCTCT 58.711 52.632 12.06 0.00 0.00 4.09
1413 2232 4.854025 GCGTCGCGAAATTAGCTC 57.146 55.556 12.06 0.00 0.00 4.09
1427 2246 1.579932 CTATCCTATCCGTGCGCGT 59.420 57.895 19.61 3.14 36.15 6.01
1452 2271 0.478072 ATTCCCTGAACCACAGCACA 59.522 50.000 0.00 0.00 44.52 4.57
1465 2284 4.101741 CGAGGTGATCTAAGGAAATTCCCT 59.898 45.833 8.66 0.00 37.19 4.20
1468 2287 5.277857 TCCGAGGTGATCTAAGGAAATTC 57.722 43.478 0.00 0.00 31.99 2.17
1473 2292 1.964223 GCATCCGAGGTGATCTAAGGA 59.036 52.381 0.00 0.00 36.99 3.36
1475 2294 3.742433 AAGCATCCGAGGTGATCTAAG 57.258 47.619 0.00 0.00 0.00 2.18
1476 2295 3.005897 GCTAAGCATCCGAGGTGATCTAA 59.994 47.826 0.00 0.00 0.00 2.10
1478 2297 1.342819 GCTAAGCATCCGAGGTGATCT 59.657 52.381 0.00 0.00 0.00 2.75
1530 2350 1.754745 CCACTCCATATCCCACCCG 59.245 63.158 0.00 0.00 0.00 5.28
1571 2391 6.571537 GCTTATGAGGTTAGGATCTACTGCTC 60.572 46.154 0.00 0.00 0.00 4.26
1636 2456 0.698238 TCCCCAACCCAGTGAATCTG 59.302 55.000 0.00 0.00 43.27 2.90
1699 2521 6.688578 ACCAGCCATATTACTGTCTTATACG 58.311 40.000 2.02 0.00 31.76 3.06
1727 2549 3.997021 TGGTCGCAACAAACAAACATTTT 59.003 34.783 0.00 0.00 0.00 1.82
1796 2619 3.201266 ACAGGTGGTTTGTCAGGTAAGAA 59.799 43.478 0.00 0.00 0.00 2.52
1801 2624 2.158667 CCTTACAGGTGGTTTGTCAGGT 60.159 50.000 0.00 0.00 35.93 4.00
1802 2625 2.504367 CCTTACAGGTGGTTTGTCAGG 58.496 52.381 0.00 0.00 34.61 3.86
1839 2662 2.413112 AGTGCGACTGAAATGTTCATCG 59.587 45.455 13.58 13.58 40.40 3.84
1856 2679 4.267349 TCCTTCTGGTGTTTAGTAGTGC 57.733 45.455 0.00 0.00 34.23 4.40
1869 2692 3.665190 ACGAGTTAAAGCTTCCTTCTGG 58.335 45.455 0.00 0.78 0.00 3.86
1870 2693 5.120363 GGTAACGAGTTAAAGCTTCCTTCTG 59.880 44.000 0.00 0.00 0.00 3.02
1920 2743 4.862574 CAGCAATGTGAAAGTGATGATTGG 59.137 41.667 0.00 0.00 42.70 3.16
1975 2798 8.639761 TCTCTGCCTTCTATAAAGTTATGGTAC 58.360 37.037 0.00 0.00 0.00 3.34
2010 2995 3.871594 GTGGTAGTATCAGCAATGTGTCC 59.128 47.826 0.00 0.00 0.00 4.02
2091 3076 6.751888 GCCATAATGTTACATGACAAAAGACC 59.248 38.462 0.00 0.00 32.47 3.85
2241 3231 0.460311 ATCGGAATCGTCAGGGTGAC 59.540 55.000 0.00 0.00 43.65 3.67
2248 3238 2.080693 CAACCCAAATCGGAATCGTCA 58.919 47.619 0.00 0.00 36.56 4.35
2424 3846 6.375455 CCTTACTCCAAAAGCAGATGTACATT 59.625 38.462 10.30 0.00 0.00 2.71
2499 3922 7.054751 ACCAGTGACTAGTTAAAGCTTCTTTT 58.945 34.615 0.00 0.00 0.00 2.27
2544 3967 4.090930 GCAATGTGAAAGTGATGATTGTGC 59.909 41.667 0.00 0.00 0.00 4.57
2615 4038 5.523188 GTGAAAAACAGAAACCATTGCATGA 59.477 36.000 0.00 0.00 0.00 3.07
2627 4050 6.858993 GCCATAATGTTACGTGAAAAACAGAA 59.141 34.615 7.60 0.00 38.87 3.02
2679 4103 0.679002 CCAGCATCCAAGGACACCTG 60.679 60.000 0.00 0.00 32.13 4.00
2768 4192 4.712829 TCAATGTTCTGCCATCCAATGATT 59.287 37.500 0.00 0.00 0.00 2.57
3032 4457 7.655328 AGAAATTTATCTCAAGAGCGTCCTATG 59.345 37.037 0.00 0.00 0.00 2.23
3135 4560 2.618709 GGCCTTCTCATTTATCCAACCG 59.381 50.000 0.00 0.00 0.00 4.44
3205 4630 8.251721 AGATGTATTATATGCGGAAGTAACCTC 58.748 37.037 0.00 0.00 0.00 3.85
3234 4659 7.491372 CGGAAGATATTTGTTGCTAAGTACTCA 59.509 37.037 0.00 0.00 0.00 3.41
3247 4672 6.713450 ACAAGTTAACCACGGAAGATATTTGT 59.287 34.615 0.88 0.00 0.00 2.83
3248 4673 7.141100 ACAAGTTAACCACGGAAGATATTTG 57.859 36.000 0.88 0.00 0.00 2.32
3249 4674 7.754851 AACAAGTTAACCACGGAAGATATTT 57.245 32.000 0.88 0.00 0.00 1.40
3251 4676 7.497909 CCATAACAAGTTAACCACGGAAGATAT 59.502 37.037 0.88 0.00 0.00 1.63
3252 4677 6.819649 CCATAACAAGTTAACCACGGAAGATA 59.180 38.462 0.88 0.00 0.00 1.98
3254 4679 4.998672 CCATAACAAGTTAACCACGGAAGA 59.001 41.667 0.88 0.00 0.00 2.87
3255 4680 4.758165 ACCATAACAAGTTAACCACGGAAG 59.242 41.667 0.88 0.00 0.00 3.46
3256 4681 4.716794 ACCATAACAAGTTAACCACGGAA 58.283 39.130 0.88 0.00 0.00 4.30
3258 4683 4.515944 TGAACCATAACAAGTTAACCACGG 59.484 41.667 0.88 0.00 0.00 4.94
3260 4685 6.797454 TGTTGAACCATAACAAGTTAACCAC 58.203 36.000 0.88 0.00 35.29 4.16
3261 4686 7.406031 TTGTTGAACCATAACAAGTTAACCA 57.594 32.000 0.88 0.00 41.57 3.67
3262 4687 8.760569 CATTTGTTGAACCATAACAAGTTAACC 58.239 33.333 0.88 0.00 45.49 2.85
3266 4691 8.420222 TCATCATTTGTTGAACCATAACAAGTT 58.580 29.630 0.00 0.00 45.49 2.66
3303 4728 5.483937 TGAGAAGTAGGCAAGGATAGAAACA 59.516 40.000 0.00 0.00 0.00 2.83
3308 4733 5.543507 ATGTGAGAAGTAGGCAAGGATAG 57.456 43.478 0.00 0.00 0.00 2.08
3317 4742 7.687941 ACAAACCAAATATGTGAGAAGTAGG 57.312 36.000 0.00 0.00 0.00 3.18
3367 4794 7.416964 AACTACTAAGATCAATGCAGAGAGT 57.583 36.000 0.00 0.00 0.00 3.24
3449 4877 5.190677 ACAAATATTTAGGAACGGTGGGAG 58.809 41.667 0.00 0.00 0.00 4.30
3450 4878 5.045432 AGACAAATATTTAGGAACGGTGGGA 60.045 40.000 0.00 0.00 0.00 4.37
3451 4879 5.190677 AGACAAATATTTAGGAACGGTGGG 58.809 41.667 0.00 0.00 0.00 4.61
3452 4880 6.753107 AAGACAAATATTTAGGAACGGTGG 57.247 37.500 0.00 0.00 0.00 4.61
3469 4897 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
3470 4898 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
3474 4902 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
3475 4903 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
3476 4904 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
3477 4905 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
3478 4906 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
3479 4907 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
3480 4908 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
3481 4909 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
3482 4910 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
3483 4911 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
3484 4912 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
3485 4913 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
3486 4914 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
3487 4915 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
3488 4916 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
3489 4917 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
3490 4918 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
3491 4919 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
3492 4920 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
3493 4921 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
3494 4922 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
3495 4923 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
3497 4925 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
3530 4958 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3531 4959 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3532 4960 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3533 4961 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3534 4962 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3535 4963 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3536 4964 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3537 4965 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3538 4966 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3539 4967 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3540 4968 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3541 4969 5.109210 TGACTACATACGGAGCAAAATGAG 58.891 41.667 0.00 0.00 0.00 2.90
3542 4970 5.079689 TGACTACATACGGAGCAAAATGA 57.920 39.130 0.00 0.00 0.00 2.57
3543 4971 5.991328 ATGACTACATACGGAGCAAAATG 57.009 39.130 0.00 0.00 34.71 2.32
3544 4972 6.374333 ACAAATGACTACATACGGAGCAAAAT 59.626 34.615 0.00 0.00 35.50 1.82
3545 4973 5.703592 ACAAATGACTACATACGGAGCAAAA 59.296 36.000 0.00 0.00 35.50 2.44
3546 4974 5.242434 ACAAATGACTACATACGGAGCAAA 58.758 37.500 0.00 0.00 35.50 3.68
3547 4975 4.827692 ACAAATGACTACATACGGAGCAA 58.172 39.130 0.00 0.00 35.50 3.91
3548 4976 4.465632 ACAAATGACTACATACGGAGCA 57.534 40.909 0.00 0.00 35.50 4.26
3549 4977 4.868171 TCAACAAATGACTACATACGGAGC 59.132 41.667 0.00 0.00 35.50 4.70
3550 4978 6.961359 TTCAACAAATGACTACATACGGAG 57.039 37.500 0.00 0.00 37.92 4.63
3551 4979 7.822334 AGATTTCAACAAATGACTACATACGGA 59.178 33.333 0.00 0.00 37.92 4.69
3552 4980 7.974675 AGATTTCAACAAATGACTACATACGG 58.025 34.615 0.00 0.00 37.92 4.02
3553 4981 8.873830 AGAGATTTCAACAAATGACTACATACG 58.126 33.333 0.00 0.00 37.92 3.06
3581 5009 9.025041 CCCTCTGTTCCTAAATATTTGTCTTTT 57.975 33.333 11.05 0.00 0.00 2.27
3582 5010 8.390921 TCCCTCTGTTCCTAAATATTTGTCTTT 58.609 33.333 11.05 0.00 0.00 2.52
3583 5011 7.928873 TCCCTCTGTTCCTAAATATTTGTCTT 58.071 34.615 11.05 0.00 0.00 3.01
3584 5012 7.182930 ACTCCCTCTGTTCCTAAATATTTGTCT 59.817 37.037 11.05 0.00 0.00 3.41
3585 5013 7.339482 ACTCCCTCTGTTCCTAAATATTTGTC 58.661 38.462 11.05 0.00 0.00 3.18
3586 5014 7.272144 ACTCCCTCTGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 0.00 2.83
3587 5015 8.487028 ACTACTCCCTCTGTTCCTAAATATTTG 58.513 37.037 11.05 1.40 0.00 2.32
3588 5016 8.625467 ACTACTCCCTCTGTTCCTAAATATTT 57.375 34.615 5.89 5.89 0.00 1.40
3589 5017 9.725206 TTACTACTCCCTCTGTTCCTAAATATT 57.275 33.333 0.00 0.00 0.00 1.28
3590 5018 9.900112 ATTACTACTCCCTCTGTTCCTAAATAT 57.100 33.333 0.00 0.00 0.00 1.28
3591 5019 9.144298 CATTACTACTCCCTCTGTTCCTAAATA 57.856 37.037 0.00 0.00 0.00 1.40
3592 5020 7.844779 TCATTACTACTCCCTCTGTTCCTAAAT 59.155 37.037 0.00 0.00 0.00 1.40
3593 5021 7.186972 TCATTACTACTCCCTCTGTTCCTAAA 58.813 38.462 0.00 0.00 0.00 1.85
3594 5022 6.738635 TCATTACTACTCCCTCTGTTCCTAA 58.261 40.000 0.00 0.00 0.00 2.69
3595 5023 6.337185 TCATTACTACTCCCTCTGTTCCTA 57.663 41.667 0.00 0.00 0.00 2.94
3596 5024 5.208294 TCATTACTACTCCCTCTGTTCCT 57.792 43.478 0.00 0.00 0.00 3.36
3597 5025 5.934402 TTCATTACTACTCCCTCTGTTCC 57.066 43.478 0.00 0.00 0.00 3.62
3598 5026 6.937392 AGTTTCATTACTACTCCCTCTGTTC 58.063 40.000 0.00 0.00 0.00 3.18
3599 5027 6.936968 AGTTTCATTACTACTCCCTCTGTT 57.063 37.500 0.00 0.00 0.00 3.16
3600 5028 8.611051 AATAGTTTCATTACTACTCCCTCTGT 57.389 34.615 0.00 0.00 33.69 3.41
3601 5029 7.863375 CGAATAGTTTCATTACTACTCCCTCTG 59.137 40.741 0.00 0.00 33.69 3.35
3602 5030 7.560626 ACGAATAGTTTCATTACTACTCCCTCT 59.439 37.037 0.00 0.00 33.69 3.69
3603 5031 7.648510 CACGAATAGTTTCATTACTACTCCCTC 59.351 40.741 0.00 0.00 33.69 4.30
3604 5032 7.123847 ACACGAATAGTTTCATTACTACTCCCT 59.876 37.037 0.00 0.00 33.69 4.20
3605 5033 7.263496 ACACGAATAGTTTCATTACTACTCCC 58.737 38.462 0.00 0.00 33.69 4.30
3606 5034 9.793252 TTACACGAATAGTTTCATTACTACTCC 57.207 33.333 0.00 0.00 33.69 3.85
3666 5094 2.626266 CCTTCCCCAGTTGTTACCAAAC 59.374 50.000 0.00 0.00 36.07 2.93
3683 5111 0.961753 CAGCAAAACTCCCACCCTTC 59.038 55.000 0.00 0.00 0.00 3.46
3755 5184 3.327757 TGACCCATTCTACAGTTTCTGCT 59.672 43.478 0.00 0.00 34.37 4.24
3756 5185 3.674997 TGACCCATTCTACAGTTTCTGC 58.325 45.455 0.00 0.00 34.37 4.26
3767 5196 4.543689 AGCATTTCATGATGACCCATTCT 58.456 39.130 0.00 0.00 0.00 2.40
3768 5197 4.931661 AGCATTTCATGATGACCCATTC 57.068 40.909 0.00 0.00 0.00 2.67
3816 5277 3.037560 AGTTTGAGGGTCGAACTCCCG 62.038 57.143 13.88 0.00 45.45 5.14
3827 5288 5.372373 GAATGAGGATTAGGAGTTTGAGGG 58.628 45.833 0.00 0.00 0.00 4.30
4373 5834 2.816087 CCTCTCAACAGTGATTGGTTGG 59.184 50.000 0.00 0.00 43.44 3.77
4374 5835 2.816087 CCCTCTCAACAGTGATTGGTTG 59.184 50.000 0.00 0.00 44.35 3.77
4375 5836 2.711009 TCCCTCTCAACAGTGATTGGTT 59.289 45.455 0.00 0.00 31.85 3.67
4376 5837 2.338809 TCCCTCTCAACAGTGATTGGT 58.661 47.619 0.00 0.00 31.85 3.67
4377 5838 3.077359 GTTCCCTCTCAACAGTGATTGG 58.923 50.000 0.00 0.00 31.85 3.16
4378 5839 4.013267 AGTTCCCTCTCAACAGTGATTG 57.987 45.455 0.00 0.00 31.85 2.67
4379 5840 4.593206 TGTAGTTCCCTCTCAACAGTGATT 59.407 41.667 0.00 0.00 31.85 2.57
4380 5841 4.021016 GTGTAGTTCCCTCTCAACAGTGAT 60.021 45.833 0.00 0.00 31.85 3.06
4381 5842 3.321111 GTGTAGTTCCCTCTCAACAGTGA 59.679 47.826 0.00 0.00 0.00 3.41
4382 5843 3.322254 AGTGTAGTTCCCTCTCAACAGTG 59.678 47.826 0.00 0.00 0.00 3.66
4383 5844 3.577919 AGTGTAGTTCCCTCTCAACAGT 58.422 45.455 0.00 0.00 0.00 3.55
4384 5845 5.471257 GTTAGTGTAGTTCCCTCTCAACAG 58.529 45.833 0.00 0.00 0.00 3.16
4385 5846 4.282703 GGTTAGTGTAGTTCCCTCTCAACA 59.717 45.833 0.00 0.00 0.00 3.33
4386 5847 4.282703 TGGTTAGTGTAGTTCCCTCTCAAC 59.717 45.833 0.00 0.00 0.00 3.18
4387 5848 4.282703 GTGGTTAGTGTAGTTCCCTCTCAA 59.717 45.833 0.00 0.00 0.00 3.02
4388 5849 3.830755 GTGGTTAGTGTAGTTCCCTCTCA 59.169 47.826 0.00 0.00 0.00 3.27
4389 5850 3.195182 GGTGGTTAGTGTAGTTCCCTCTC 59.805 52.174 0.00 0.00 0.00 3.20
4390 5851 3.171528 GGTGGTTAGTGTAGTTCCCTCT 58.828 50.000 0.00 0.00 0.00 3.69
4391 5852 2.901839 TGGTGGTTAGTGTAGTTCCCTC 59.098 50.000 0.00 0.00 0.00 4.30
4392 5853 2.636403 GTGGTGGTTAGTGTAGTTCCCT 59.364 50.000 0.00 0.00 0.00 4.20
4393 5854 2.611224 CGTGGTGGTTAGTGTAGTTCCC 60.611 54.545 0.00 0.00 0.00 3.97
4394 5855 2.680577 CGTGGTGGTTAGTGTAGTTCC 58.319 52.381 0.00 0.00 0.00 3.62
4395 5856 2.064014 GCGTGGTGGTTAGTGTAGTTC 58.936 52.381 0.00 0.00 0.00 3.01
4396 5857 1.270465 GGCGTGGTGGTTAGTGTAGTT 60.270 52.381 0.00 0.00 0.00 2.24
4397 5858 0.319405 GGCGTGGTGGTTAGTGTAGT 59.681 55.000 0.00 0.00 0.00 2.73
4398 5859 0.319083 TGGCGTGGTGGTTAGTGTAG 59.681 55.000 0.00 0.00 0.00 2.74
4399 5860 0.757512 TTGGCGTGGTGGTTAGTGTA 59.242 50.000 0.00 0.00 0.00 2.90
4400 5861 0.816421 GTTGGCGTGGTGGTTAGTGT 60.816 55.000 0.00 0.00 0.00 3.55
4401 5862 1.512156 GGTTGGCGTGGTGGTTAGTG 61.512 60.000 0.00 0.00 0.00 2.74
4402 5863 1.228033 GGTTGGCGTGGTGGTTAGT 60.228 57.895 0.00 0.00 0.00 2.24
4403 5864 1.072505 AGGTTGGCGTGGTGGTTAG 59.927 57.895 0.00 0.00 0.00 2.34
4404 5865 1.228003 CAGGTTGGCGTGGTGGTTA 60.228 57.895 0.00 0.00 0.00 2.85
4405 5866 2.518349 CAGGTTGGCGTGGTGGTT 60.518 61.111 0.00 0.00 0.00 3.67
4406 5867 3.767630 GACAGGTTGGCGTGGTGGT 62.768 63.158 0.00 0.00 35.03 4.16
4407 5868 2.978010 GACAGGTTGGCGTGGTGG 60.978 66.667 0.00 0.00 35.03 4.61
4408 5869 3.345808 CGACAGGTTGGCGTGGTG 61.346 66.667 0.00 0.00 45.41 4.17
4415 5876 4.410400 GGAGGGGCGACAGGTTGG 62.410 72.222 0.00 0.00 0.00 3.77
4416 5877 3.612247 CTGGAGGGGCGACAGGTTG 62.612 68.421 0.00 0.00 0.00 3.77
4417 5878 3.322466 CTGGAGGGGCGACAGGTT 61.322 66.667 0.00 0.00 0.00 3.50
4422 5883 4.344865 TTTGGCTGGAGGGGCGAC 62.345 66.667 0.00 0.00 34.31 5.19
4423 5884 4.344865 GTTTGGCTGGAGGGGCGA 62.345 66.667 0.00 0.00 34.31 5.54
4424 5885 4.659172 TGTTTGGCTGGAGGGGCG 62.659 66.667 0.00 0.00 34.31 6.13
4425 5886 2.991540 GTGTTTGGCTGGAGGGGC 60.992 66.667 0.00 0.00 0.00 5.80
4426 5887 1.903404 GTGTGTTTGGCTGGAGGGG 60.903 63.158 0.00 0.00 0.00 4.79
4427 5888 1.903404 GGTGTGTTTGGCTGGAGGG 60.903 63.158 0.00 0.00 0.00 4.30
4428 5889 1.903404 GGGTGTGTTTGGCTGGAGG 60.903 63.158 0.00 0.00 0.00 4.30
4429 5890 0.540365 ATGGGTGTGTTTGGCTGGAG 60.540 55.000 0.00 0.00 0.00 3.86
4430 5891 0.827089 CATGGGTGTGTTTGGCTGGA 60.827 55.000 0.00 0.00 0.00 3.86
4431 5892 1.667151 CATGGGTGTGTTTGGCTGG 59.333 57.895 0.00 0.00 0.00 4.85
4432 5893 1.667151 CCATGGGTGTGTTTGGCTG 59.333 57.895 2.85 0.00 0.00 4.85
4433 5894 1.533753 CCCATGGGTGTGTTTGGCT 60.534 57.895 23.93 0.00 0.00 4.75
4434 5895 3.059099 CCCATGGGTGTGTTTGGC 58.941 61.111 23.93 0.00 0.00 4.52
4444 5905 5.434182 ACATAAAATTGGAAACCCATGGG 57.566 39.130 30.23 30.23 42.03 4.00
4445 5906 6.710278 AGAACATAAAATTGGAAACCCATGG 58.290 36.000 4.14 4.14 32.92 3.66
4446 5907 8.096414 AGAAGAACATAAAATTGGAAACCCATG 58.904 33.333 0.00 0.00 32.92 3.66
4447 5908 8.206126 AGAAGAACATAAAATTGGAAACCCAT 57.794 30.769 0.00 0.00 32.92 4.00
4448 5909 7.610580 AGAAGAACATAAAATTGGAAACCCA 57.389 32.000 0.00 0.00 0.00 4.51
4449 5910 8.147704 TGAAGAAGAACATAAAATTGGAAACCC 58.852 33.333 0.00 0.00 0.00 4.11
4450 5911 9.710900 ATGAAGAAGAACATAAAATTGGAAACC 57.289 29.630 0.00 0.00 0.00 3.27
4455 5916 9.815936 GCAAAATGAAGAAGAACATAAAATTGG 57.184 29.630 0.00 0.00 0.00 3.16
4460 5921 9.545105 ACAATGCAAAATGAAGAAGAACATAAA 57.455 25.926 0.00 0.00 0.00 1.40
4461 5922 9.195411 GACAATGCAAAATGAAGAAGAACATAA 57.805 29.630 0.00 0.00 0.00 1.90
4462 5923 7.538334 CGACAATGCAAAATGAAGAAGAACATA 59.462 33.333 0.00 0.00 0.00 2.29
4463 5924 6.364165 CGACAATGCAAAATGAAGAAGAACAT 59.636 34.615 0.00 0.00 0.00 2.71
4464 5925 5.686841 CGACAATGCAAAATGAAGAAGAACA 59.313 36.000 0.00 0.00 0.00 3.18
4465 5926 5.914635 TCGACAATGCAAAATGAAGAAGAAC 59.085 36.000 0.00 0.00 0.00 3.01
4466 5927 6.017192 TCTCGACAATGCAAAATGAAGAAGAA 60.017 34.615 0.00 0.00 0.00 2.52
4467 5928 5.469760 TCTCGACAATGCAAAATGAAGAAGA 59.530 36.000 0.00 0.00 0.00 2.87
4468 5929 5.692814 TCTCGACAATGCAAAATGAAGAAG 58.307 37.500 0.00 0.00 0.00 2.85
4469 5930 5.687770 TCTCGACAATGCAAAATGAAGAA 57.312 34.783 0.00 0.00 0.00 2.52
4470 5931 5.412286 TGATCTCGACAATGCAAAATGAAGA 59.588 36.000 0.00 0.00 0.00 2.87
4471 5932 5.633927 TGATCTCGACAATGCAAAATGAAG 58.366 37.500 0.00 0.00 0.00 3.02
4472 5933 5.412286 TCTGATCTCGACAATGCAAAATGAA 59.588 36.000 0.00 0.00 0.00 2.57
4473 5934 4.937015 TCTGATCTCGACAATGCAAAATGA 59.063 37.500 0.00 0.00 0.00 2.57
4474 5935 5.225899 TCTGATCTCGACAATGCAAAATG 57.774 39.130 0.00 0.00 0.00 2.32
4475 5936 7.741027 ATATCTGATCTCGACAATGCAAAAT 57.259 32.000 0.00 0.00 0.00 1.82
4476 5937 8.837788 ATATATCTGATCTCGACAATGCAAAA 57.162 30.769 0.00 0.00 0.00 2.44
4477 5938 9.578439 CTATATATCTGATCTCGACAATGCAAA 57.422 33.333 0.00 0.00 0.00 3.68
4478 5939 8.743714 ACTATATATCTGATCTCGACAATGCAA 58.256 33.333 0.00 0.00 0.00 4.08
4479 5940 8.186821 CACTATATATCTGATCTCGACAATGCA 58.813 37.037 0.00 0.00 0.00 3.96
4480 5941 7.167302 GCACTATATATCTGATCTCGACAATGC 59.833 40.741 0.00 0.00 0.00 3.56
4481 5942 8.186821 TGCACTATATATCTGATCTCGACAATG 58.813 37.037 0.00 0.00 0.00 2.82
4482 5943 8.286191 TGCACTATATATCTGATCTCGACAAT 57.714 34.615 0.00 0.00 0.00 2.71
4483 5944 7.687941 TGCACTATATATCTGATCTCGACAA 57.312 36.000 0.00 0.00 0.00 3.18
4484 5945 7.872113 ATGCACTATATATCTGATCTCGACA 57.128 36.000 0.00 0.00 0.00 4.35
4503 5964 9.955208 TGTGAAAGATTATCATCAATTATGCAC 57.045 29.630 0.00 0.00 35.38 4.57
4508 5969 9.904198 TGGACTGTGAAAGATTATCATCAATTA 57.096 29.630 2.99 0.00 0.00 1.40
4509 5970 8.812513 TGGACTGTGAAAGATTATCATCAATT 57.187 30.769 2.99 0.00 0.00 2.32
4510 5971 8.680903 GTTGGACTGTGAAAGATTATCATCAAT 58.319 33.333 2.99 0.00 0.00 2.57
4511 5972 7.665145 TGTTGGACTGTGAAAGATTATCATCAA 59.335 33.333 2.99 0.00 0.00 2.57
4512 5973 7.167535 TGTTGGACTGTGAAAGATTATCATCA 58.832 34.615 0.00 0.00 0.00 3.07
4513 5974 7.615582 TGTTGGACTGTGAAAGATTATCATC 57.384 36.000 0.00 0.00 0.00 2.92
4547 6008 1.472728 CCTGGTACCATGGAGTAACGC 60.473 57.143 21.47 5.93 32.27 4.84
4558 6019 4.927267 AGAAATGATCAACCTGGTACCA 57.073 40.909 15.39 15.39 0.00 3.25
4560 6021 4.399303 CCCAAGAAATGATCAACCTGGTAC 59.601 45.833 0.00 0.00 0.00 3.34
4589 6050 4.212143 AGTCATGATGCTAGACTTTGCA 57.788 40.909 0.00 5.50 39.45 4.08
4607 6068 6.646653 TGATGTTTCAGTGATCAGTACAAGTC 59.353 38.462 1.86 1.41 0.00 3.01
4622 6088 6.257423 TGCTAACGCATAATTGATGTTTCAG 58.743 36.000 0.00 0.00 42.25 3.02
4638 6104 7.602517 ATTAAATGGATAGAGATGCTAACGC 57.397 36.000 0.00 0.00 31.66 4.84
4643 6109 6.774170 TGCACAATTAAATGGATAGAGATGCT 59.226 34.615 0.00 0.00 0.00 3.79
4654 6120 5.341872 TTCCAGGATGCACAATTAAATGG 57.658 39.130 0.00 0.00 31.97 3.16
4655 6121 7.944061 TCTATTCCAGGATGCACAATTAAATG 58.056 34.615 0.00 0.00 31.97 2.32
4656 6122 8.416329 GTTCTATTCCAGGATGCACAATTAAAT 58.584 33.333 0.00 0.00 31.97 1.40
4680 6146 9.784531 CAATAATGTCATCTACCCTTATCAGTT 57.215 33.333 0.00 0.00 0.00 3.16
5072 6541 0.040157 GCATGACTTTCGCAAGTGCA 60.040 50.000 4.84 4.04 43.79 4.57
5150 6622 0.387202 CATTGCCGGTTTCAACACCA 59.613 50.000 1.90 0.00 36.49 4.17
5219 6691 7.903431 GGAAAATATGTTGCGTACTAAGTTCAG 59.097 37.037 0.00 0.00 0.00 3.02
5282 6765 3.775661 ATAAAAATGTGTACCGGCAGC 57.224 42.857 0.00 0.00 0.00 5.25
5324 6822 4.169508 ACTCGACTGAAAATGATGTCTCG 58.830 43.478 0.00 0.00 0.00 4.04
5466 6964 4.010349 ACCCTCGGAAATCTTCAATTGAC 58.990 43.478 7.89 0.00 0.00 3.18
5551 7049 5.105473 CCTGGTATGTACTCGAAAGAAAGGA 60.105 44.000 0.00 0.00 41.32 3.36
5562 7060 6.921914 GTACATGGTATCCTGGTATGTACTC 58.078 44.000 20.18 7.46 45.14 2.59
5571 7069 6.042093 ACATAGTCAAGTACATGGTATCCTGG 59.958 42.308 0.00 0.00 0.00 4.45
5594 7095 3.805422 CGTTTAGAGGTAGCACAACAACA 59.195 43.478 0.00 0.00 0.00 3.33
5595 7096 3.805971 ACGTTTAGAGGTAGCACAACAAC 59.194 43.478 0.00 0.00 0.00 3.32
5596 7097 4.062677 ACGTTTAGAGGTAGCACAACAA 57.937 40.909 0.00 0.00 0.00 2.83
5622 7123 1.519408 TGGAGGCTTAACGCAAAGAC 58.481 50.000 1.73 0.00 41.67 3.01
5660 7161 7.542025 ACATCCAAAGCTCATTTGTTAGATTC 58.458 34.615 0.00 0.00 45.78 2.52
5669 7170 7.568349 TGATCTACTACATCCAAAGCTCATTT 58.432 34.615 0.00 0.00 0.00 2.32
5693 7194 5.295152 TCCTGATTTCTCATGTCGATGATG 58.705 41.667 0.00 0.00 37.97 3.07
5777 7279 2.058057 GTTTTAACAACGGGCATGCTG 58.942 47.619 18.92 13.11 0.00 4.41
5787 7289 9.772973 AGGGAATTATTTTCCAGTTTTAACAAC 57.227 29.630 6.70 0.00 40.32 3.32
5805 7307 4.101645 TCCGGTTTTCACAAGGGAATTA 57.898 40.909 0.00 0.00 0.00 1.40
5817 7344 5.290158 GGAAAGTTGTTCTTTTCCGGTTTTC 59.710 40.000 0.00 0.00 45.15 2.29
5845 7372 0.105964 GCAAAACCTTTCCACCCACC 59.894 55.000 0.00 0.00 0.00 4.61
5846 7373 0.249280 CGCAAAACCTTTCCACCCAC 60.249 55.000 0.00 0.00 0.00 4.61
5847 7374 0.684805 ACGCAAAACCTTTCCACCCA 60.685 50.000 0.00 0.00 0.00 4.51
5848 7375 1.320507 TACGCAAAACCTTTCCACCC 58.679 50.000 0.00 0.00 0.00 4.61
5849 7376 3.439895 TTTACGCAAAACCTTTCCACC 57.560 42.857 0.00 0.00 0.00 4.61
5850 7377 3.738791 CCATTTACGCAAAACCTTTCCAC 59.261 43.478 0.00 0.00 0.00 4.02
5851 7378 3.243907 CCCATTTACGCAAAACCTTTCCA 60.244 43.478 0.00 0.00 0.00 3.53
5853 7380 3.738791 CACCCATTTACGCAAAACCTTTC 59.261 43.478 0.00 0.00 0.00 2.62
5916 7449 7.391554 TGAAGGCAATAGCTAACCATGATTATC 59.608 37.037 11.98 0.00 41.70 1.75
5993 7526 4.570930 TCAACTTGTGCCGTTCATACATA 58.429 39.130 0.00 0.00 0.00 2.29
6121 7654 1.269831 GCATTCTCTACTAGTGGGGCG 60.270 57.143 5.39 0.00 0.00 6.13
6186 7719 1.534235 ACGTCTGCTGGAAGAGGGT 60.534 57.895 3.73 0.00 36.58 4.34
6196 7729 6.560253 AAAAATAGATCAAACACGTCTGCT 57.440 33.333 0.00 0.00 0.00 4.24
6299 7832 3.602513 CTCCTTCTGCCGCTGCACT 62.603 63.158 0.00 0.00 44.23 4.40
6350 7883 2.029844 GTCCTTGTCCGACTGCAGC 61.030 63.158 15.27 5.81 0.00 5.25
6433 7966 1.133761 AGACCGAGAGATCCGATCCAA 60.134 52.381 4.67 0.00 0.00 3.53
6434 7967 0.474614 AGACCGAGAGATCCGATCCA 59.525 55.000 4.67 0.00 0.00 3.41
6435 7968 1.161843 GAGACCGAGAGATCCGATCC 58.838 60.000 4.67 0.00 0.00 3.36
6436 7969 1.161843 GGAGACCGAGAGATCCGATC 58.838 60.000 0.00 0.00 0.00 3.69
6437 7970 0.474614 TGGAGACCGAGAGATCCGAT 59.525 55.000 0.00 0.00 34.39 4.18
6438 7971 0.255033 TTGGAGACCGAGAGATCCGA 59.745 55.000 0.00 0.00 34.39 4.55
6439 7972 0.382515 GTTGGAGACCGAGAGATCCG 59.617 60.000 0.00 0.00 34.39 4.18
6440 7973 1.407258 CAGTTGGAGACCGAGAGATCC 59.593 57.143 0.00 0.00 0.00 3.36
6469 8002 2.913060 GAGGGGATCGGACGGAGG 60.913 72.222 0.00 0.00 0.00 4.30
6473 8006 2.827190 TCGTGAGGGGATCGGACG 60.827 66.667 0.00 0.00 0.00 4.79
6555 8093 6.398095 CAAAAGTTCCCACTGTTCTTTCTTT 58.602 36.000 0.00 0.00 26.35 2.52
6556 8094 5.624509 GCAAAAGTTCCCACTGTTCTTTCTT 60.625 40.000 0.00 0.00 26.35 2.52
6557 8095 4.142160 GCAAAAGTTCCCACTGTTCTTTCT 60.142 41.667 0.00 0.00 26.35 2.52
6558 8096 4.112634 GCAAAAGTTCCCACTGTTCTTTC 58.887 43.478 0.00 0.00 26.35 2.62
6603 8144 3.782656 AAGGAATTTCGTACCACCACT 57.217 42.857 0.00 0.00 0.00 4.00
6723 8270 1.399744 AACTGCCGAGTGAGTGGACA 61.400 55.000 0.00 0.00 30.61 4.02
6726 8273 1.669115 CCAACTGCCGAGTGAGTGG 60.669 63.158 0.00 0.00 30.61 4.00
6818 8373 1.486211 CAGGTCAAGTCCGGGATACT 58.514 55.000 0.00 0.00 0.00 2.12
6842 8398 2.906389 ACTTCAAGTCACCAGCCTATCA 59.094 45.455 0.00 0.00 0.00 2.15
6846 8402 0.034059 CGACTTCAAGTCACCAGCCT 59.966 55.000 17.81 0.00 45.30 4.58
6973 8551 1.013596 CGACAAAGCCGGCAATATGA 58.986 50.000 31.54 0.00 0.00 2.15
7166 8909 2.315386 GGAACACGACGGCACTTCC 61.315 63.158 0.00 0.00 0.00 3.46
7187 8930 4.400567 GCTCATATTTTCAACCAGAAGCCT 59.599 41.667 0.00 0.00 37.57 4.58
7257 9000 8.293157 TGACTCGTTTCATCTCTGCTATAATAG 58.707 37.037 0.00 0.00 0.00 1.73
7265 9008 3.257393 ACATGACTCGTTTCATCTCTGC 58.743 45.455 0.00 0.00 33.74 4.26
7266 9009 6.977502 AGATTACATGACTCGTTTCATCTCTG 59.022 38.462 0.00 0.00 33.74 3.35
7267 9010 7.106439 AGATTACATGACTCGTTTCATCTCT 57.894 36.000 0.00 0.00 33.74 3.10
7268 9011 8.747666 GTTAGATTACATGACTCGTTTCATCTC 58.252 37.037 0.00 0.00 33.74 2.75
7269 9012 8.251026 TGTTAGATTACATGACTCGTTTCATCT 58.749 33.333 0.00 0.00 33.74 2.90
7270 9013 8.407457 TGTTAGATTACATGACTCGTTTCATC 57.593 34.615 0.00 0.00 33.74 2.92
7271 9014 8.251026 TCTGTTAGATTACATGACTCGTTTCAT 58.749 33.333 0.00 0.00 36.62 2.57
7273 9016 7.968956 TCTCTGTTAGATTACATGACTCGTTTC 59.031 37.037 0.00 0.00 0.00 2.78
7275 9018 7.337184 TCTCTCTGTTAGATTACATGACTCGTT 59.663 37.037 0.00 0.00 32.41 3.85
7276 9019 6.824196 TCTCTCTGTTAGATTACATGACTCGT 59.176 38.462 0.00 0.00 32.41 4.18
7279 9022 8.682710 GTCTTCTCTCTGTTAGATTACATGACT 58.317 37.037 0.00 0.00 32.41 3.41
7280 9023 8.462811 TGTCTTCTCTCTGTTAGATTACATGAC 58.537 37.037 0.00 0.00 32.41 3.06
7281 9024 8.581253 TGTCTTCTCTCTGTTAGATTACATGA 57.419 34.615 0.00 0.00 32.41 3.07
7282 9025 9.645059 TTTGTCTTCTCTCTGTTAGATTACATG 57.355 33.333 0.00 0.00 32.41 3.21
7296 9039 5.006552 GTGCAGATGCTATTTGTCTTCTCTC 59.993 44.000 6.35 0.00 42.66 3.20
7303 9046 4.095334 TCACATGTGCAGATGCTATTTGTC 59.905 41.667 22.79 0.00 42.66 3.18
7304 9047 4.011698 TCACATGTGCAGATGCTATTTGT 58.988 39.130 22.79 0.73 42.66 2.83
7419 9162 1.445410 CGCCAACGCTACTGCTACA 60.445 57.895 0.00 0.00 36.97 2.74
7430 9173 1.367195 GACAACGTCAACGCCAACG 60.367 57.895 1.81 2.94 44.43 4.10
7431 9174 0.587985 GTGACAACGTCAACGCCAAC 60.588 55.000 1.81 0.00 44.49 3.77
7432 9175 1.707239 GGTGACAACGTCAACGCCAA 61.707 55.000 1.81 0.00 44.49 4.52
7433 9176 2.174969 GGTGACAACGTCAACGCCA 61.175 57.895 1.81 0.00 44.49 5.69
7434 9177 2.629763 GGTGACAACGTCAACGCC 59.370 61.111 1.81 0.00 44.49 5.68
7487 9230 1.203994 ACTACTTCCCCAACGATGACG 59.796 52.381 0.00 0.00 45.75 4.35
7499 9242 0.169894 GGACACCGACGACTACTTCC 59.830 60.000 0.00 0.00 0.00 3.46
7551 9294 2.268076 TTTTTGGGGAGCGCTCTGC 61.268 57.895 34.46 20.12 46.98 4.26
7552 9295 1.581447 GTTTTTGGGGAGCGCTCTG 59.419 57.895 34.46 0.00 0.00 3.35
7553 9296 1.603739 GGTTTTTGGGGAGCGCTCT 60.604 57.895 34.46 2.23 0.00 4.09
7554 9297 1.179174 AAGGTTTTTGGGGAGCGCTC 61.179 55.000 29.38 29.38 0.00 5.03
7555 9298 0.111639 TAAGGTTTTTGGGGAGCGCT 59.888 50.000 11.27 11.27 0.00 5.92
7556 9299 1.134367 GATAAGGTTTTTGGGGAGCGC 59.866 52.381 0.00 0.00 0.00 5.92
7557 9300 2.163613 GTGATAAGGTTTTTGGGGAGCG 59.836 50.000 0.00 0.00 0.00 5.03
7558 9301 2.496070 GGTGATAAGGTTTTTGGGGAGC 59.504 50.000 0.00 0.00 0.00 4.70
7559 9302 3.096852 GGGTGATAAGGTTTTTGGGGAG 58.903 50.000 0.00 0.00 0.00 4.30
7560 9303 2.725227 AGGGTGATAAGGTTTTTGGGGA 59.275 45.455 0.00 0.00 0.00 4.81
7561 9304 3.184382 AGGGTGATAAGGTTTTTGGGG 57.816 47.619 0.00 0.00 0.00 4.96
7562 9305 4.801330 GAAGGGTGATAAGGTTTTTGGG 57.199 45.455 0.00 0.00 0.00 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.