Multiple sequence alignment - TraesCS6D01G278300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G278300 chr6D 100.000 5135 0 0 1 5135 386481356 386476222 0.000000e+00 9483.0
1 TraesCS6D01G278300 chr6D 100.000 2868 0 0 5389 8256 386475968 386473101 0.000000e+00 5297.0
2 TraesCS6D01G278300 chr6D 87.417 755 65 14 2028 2760 386478510 386477764 0.000000e+00 841.0
3 TraesCS6D01G278300 chr6D 87.417 755 65 14 2847 3593 386479329 386478597 0.000000e+00 841.0
4 TraesCS6D01G278300 chr6D 88.462 624 63 4 7630 8247 445410492 445409872 0.000000e+00 745.0
5 TraesCS6D01G278300 chr6D 91.693 313 22 4 3818 4128 327923070 327922760 1.650000e-116 431.0
6 TraesCS6D01G278300 chr6D 79.091 220 32 12 4790 4996 82644088 82644306 1.120000e-28 139.0
7 TraesCS6D01G278300 chr6D 90.164 61 6 0 5069 5129 427708749 427708809 6.870000e-11 80.5
8 TraesCS6D01G278300 chr6A 93.896 3162 116 26 686 3817 531707352 531704238 0.000000e+00 4698.0
9 TraesCS6D01G278300 chr6A 93.220 1357 59 15 6239 7564 531702039 531700685 0.000000e+00 1965.0
10 TraesCS6D01G278300 chr6A 92.449 1033 46 8 4125 5135 531704235 531703213 0.000000e+00 1447.0
11 TraesCS6D01G278300 chr6A 95.278 826 34 2 5424 6245 531703131 531702307 0.000000e+00 1304.0
12 TraesCS6D01G278300 chr6A 88.064 754 66 13 2847 3593 531706013 531705277 0.000000e+00 872.0
13 TraesCS6D01G278300 chr6A 86.479 747 57 19 2028 2760 531705190 531704474 0.000000e+00 780.0
14 TraesCS6D01G278300 chr6A 88.661 635 62 10 1 629 531709438 531708808 0.000000e+00 765.0
15 TraesCS6D01G278300 chr6B 94.878 1933 74 13 1898 3817 577422989 577421069 0.000000e+00 2998.0
16 TraesCS6D01G278300 chr6B 96.091 1663 56 6 5450 7110 577419705 577418050 0.000000e+00 2702.0
17 TraesCS6D01G278300 chr6B 93.729 1467 59 19 927 2386 577424429 577422989 0.000000e+00 2169.0
18 TraesCS6D01G278300 chr6B 93.462 1040 34 11 4125 5135 577421066 577420032 0.000000e+00 1513.0
19 TraesCS6D01G278300 chr6B 87.350 751 66 14 2028 2760 577422033 577421294 0.000000e+00 833.0
20 TraesCS6D01G278300 chr6B 90.521 633 56 4 1 629 577425382 577424750 0.000000e+00 833.0
21 TraesCS6D01G278300 chr6B 86.126 764 65 19 2847 3593 577422860 577422121 0.000000e+00 785.0
22 TraesCS6D01G278300 chr6B 90.610 607 28 6 7050 7632 577418050 577417449 0.000000e+00 778.0
23 TraesCS6D01G278300 chr6B 85.215 372 33 8 2847 3210 577423346 577422989 6.090000e-96 363.0
24 TraesCS6D01G278300 chr6B 87.500 232 28 1 630 861 577424680 577424450 4.910000e-67 267.0
25 TraesCS6D01G278300 chr2D 96.262 535 14 2 7630 8158 621834530 621833996 0.000000e+00 872.0
26 TraesCS6D01G278300 chr2D 83.728 338 46 9 1 329 55709039 55708702 2.240000e-80 311.0
27 TraesCS6D01G278300 chr2D 99.010 101 1 0 8156 8256 621832756 621832656 1.830000e-41 182.0
28 TraesCS6D01G278300 chr2D 87.500 104 11 2 8140 8242 95195644 95195746 1.460000e-22 119.0
29 TraesCS6D01G278300 chr2D 86.735 98 13 0 532 629 201395308 201395211 8.760000e-20 110.0
30 TraesCS6D01G278300 chr2D 89.552 67 7 0 5069 5135 575764837 575764771 1.480000e-12 86.1
31 TraesCS6D01G278300 chr2D 87.692 65 7 1 653 717 332494459 332494396 3.200000e-09 75.0
32 TraesCS6D01G278300 chr4B 91.921 557 37 5 7616 8165 301752918 301753473 0.000000e+00 773.0
33 TraesCS6D01G278300 chr4B 91.921 557 37 5 7616 8165 301809459 301810014 0.000000e+00 773.0
34 TraesCS6D01G278300 chr4B 91.906 556 38 4 7616 8165 301835791 301836345 0.000000e+00 771.0
35 TraesCS6D01G278300 chr4B 91.741 557 38 5 7616 8165 301779975 301780530 0.000000e+00 767.0
36 TraesCS6D01G278300 chr4B 79.310 464 80 14 1 453 423813800 423814258 2.240000e-80 311.0
37 TraesCS6D01G278300 chr4B 90.909 44 3 1 530 573 572560535 572560493 3.220000e-04 58.4
38 TraesCS6D01G278300 chr1D 88.907 622 60 4 7632 8247 311760317 311760935 0.000000e+00 758.0
39 TraesCS6D01G278300 chr1D 96.452 310 10 1 3818 4126 143475235 143475544 2.060000e-140 510.0
40 TraesCS6D01G278300 chr1D 96.117 309 12 0 3818 4126 63735206 63735514 9.560000e-139 505.0
41 TraesCS6D01G278300 chr1D 96.405 306 11 0 3818 4123 245081987 245082292 9.560000e-139 505.0
42 TraesCS6D01G278300 chr1D 80.769 130 14 9 4790 4915 425050501 425050379 3.170000e-14 91.6
43 TraesCS6D01G278300 chr1D 93.443 61 4 0 5069 5129 475113983 475113923 3.170000e-14 91.6
44 TraesCS6D01G278300 chr5D 88.474 616 65 3 7632 8241 61647716 61648331 0.000000e+00 739.0
45 TraesCS6D01G278300 chr5D 96.440 309 11 0 3818 4126 78075965 78075657 2.060000e-140 510.0
46 TraesCS6D01G278300 chr5D 84.894 331 37 11 11 333 238376686 238376361 1.030000e-83 322.0
47 TraesCS6D01G278300 chr5D 97.333 75 2 0 8182 8256 310170582 310170656 2.420000e-25 128.0
48 TraesCS6D01G278300 chr5D 90.164 61 4 2 5075 5135 420698744 420698802 2.470000e-10 78.7
49 TraesCS6D01G278300 chr5D 79.464 112 14 7 651 759 443470135 443470030 4.130000e-08 71.3
50 TraesCS6D01G278300 chr5D 86.792 53 7 0 640 692 236256544 236256492 8.950000e-05 60.2
51 TraesCS6D01G278300 chr7D 88.264 622 64 5 7632 8247 571379847 571380465 0.000000e+00 736.0
52 TraesCS6D01G278300 chr7D 96.440 309 11 0 3818 4126 637431675 637431367 2.060000e-140 510.0
53 TraesCS6D01G278300 chr7D 96.440 309 11 0 3818 4126 637500376 637500068 2.060000e-140 510.0
54 TraesCS6D01G278300 chr7D 78.509 228 32 12 4785 4996 161651196 161651422 5.200000e-27 134.0
55 TraesCS6D01G278300 chr7D 91.803 61 5 0 5069 5129 94796485 94796545 1.480000e-12 86.1
56 TraesCS6D01G278300 chr7D 88.060 67 8 0 5069 5135 115137336 115137270 6.870000e-11 80.5
57 TraesCS6D01G278300 chr4D 96.452 310 10 1 3818 4126 273030174 273029865 2.060000e-140 510.0
58 TraesCS6D01G278300 chr4D 96.405 306 11 0 3821 4126 93721135 93720830 9.560000e-139 505.0
59 TraesCS6D01G278300 chr4D 90.823 316 26 3 3818 4131 404685737 404685423 3.560000e-113 420.0
60 TraesCS6D01G278300 chr4D 83.235 340 47 9 1 332 354026090 354026427 3.740000e-78 303.0
61 TraesCS6D01G278300 chr3D 96.452 310 10 1 3818 4126 71448916 71448607 2.060000e-140 510.0
62 TraesCS6D01G278300 chr3D 82.320 181 30 2 630 810 413654665 413654487 1.110000e-33 156.0
63 TraesCS6D01G278300 chr3D 91.667 60 5 0 5069 5128 508554203 508554262 5.310000e-12 84.2
64 TraesCS6D01G278300 chr3D 100.000 28 0 0 530 557 178527815 178527842 1.500000e-02 52.8
65 TraesCS6D01G278300 chr3A 83.810 525 61 20 1 507 638717241 638717759 2.080000e-130 477.0
66 TraesCS6D01G278300 chr3A 89.490 314 33 0 3818 4131 597252888 597252575 1.670000e-106 398.0
67 TraesCS6D01G278300 chr3A 78.365 208 38 6 4787 4990 41162485 41162689 2.420000e-25 128.0
68 TraesCS6D01G278300 chr3A 80.870 115 19 3 651 763 553547685 553547798 4.100000e-13 87.9
69 TraesCS6D01G278300 chr2A 91.374 313 27 0 3819 4131 396441403 396441715 5.920000e-116 429.0
70 TraesCS6D01G278300 chr2A 90.698 43 0 3 783 821 564222920 564222878 4.000000e-03 54.7
71 TraesCS6D01G278300 chr7B 90.096 313 31 0 3819 4131 17575254 17575566 2.770000e-109 407.0
72 TraesCS6D01G278300 chr7B 79.915 473 85 9 1 465 506244670 506245140 1.030000e-88 339.0
73 TraesCS6D01G278300 chr7B 80.444 225 28 10 4787 4996 143256083 143255860 3.080000e-34 158.0
74 TraesCS6D01G278300 chr7B 83.582 134 16 5 4869 4996 163330342 163330209 4.050000e-23 121.0
75 TraesCS6D01G278300 chr7B 86.598 97 9 4 4769 4864 160927534 160927441 4.080000e-18 104.0
76 TraesCS6D01G278300 chr2B 82.328 464 70 11 10 464 201477821 201477361 7.770000e-105 392.0
77 TraesCS6D01G278300 chr2B 76.380 453 88 18 1 442 303026529 303026973 8.340000e-55 226.0
78 TraesCS6D01G278300 chr5A 89.068 311 34 0 3818 4128 432961918 432962228 3.610000e-103 387.0
79 TraesCS6D01G278300 chr7A 87.302 315 38 2 3818 4131 86968642 86968329 7.880000e-95 359.0
80 TraesCS6D01G278300 chr7A 88.727 275 30 1 3857 4131 424921816 424921543 1.330000e-87 335.0
81 TraesCS6D01G278300 chr7A 82.292 96 17 0 530 625 620846595 620846690 5.310000e-12 84.2
82 TraesCS6D01G278300 chr7A 83.333 84 12 2 8166 8248 238591344 238591262 8.890000e-10 76.8
83 TraesCS6D01G278300 chr4A 89.455 275 29 0 3857 4131 172009393 172009119 1.710000e-91 348.0
84 TraesCS6D01G278300 chr4A 77.754 472 91 13 1 463 533207185 533206719 2.270000e-70 278.0
85 TraesCS6D01G278300 chr1B 81.771 384 55 14 1 373 623221815 623221436 2.890000e-79 307.0
86 TraesCS6D01G278300 chr3B 76.334 431 74 17 1 409 683312940 683313364 1.090000e-48 206.0
87 TraesCS6D01G278300 chr3B 82.743 226 23 13 4785 4995 650362814 650362590 3.930000e-43 187.0
88 TraesCS6D01G278300 chr1A 78.696 230 30 13 4785 4996 465770180 465769952 1.450000e-27 135.0
89 TraesCS6D01G278300 chr1A 87.097 62 6 2 633 693 295633963 295634023 1.490000e-07 69.4
90 TraesCS6D01G278300 chr5B 83.529 85 14 0 8166 8250 119422180 119422096 6.870000e-11 80.5
91 TraesCS6D01G278300 chr5B 83.871 62 8 2 633 693 245353853 245353913 3.220000e-04 58.4
92 TraesCS6D01G278300 chr5B 76.923 117 18 6 651 763 580755584 580755473 3.220000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G278300 chr6D 386473101 386481356 8255 True 4115.500000 9483 93.708500 1 8256 4 chr6D.!!$R3 8255
1 TraesCS6D01G278300 chr6D 445409872 445410492 620 True 745.000000 745 88.462000 7630 8247 1 chr6D.!!$R2 617
2 TraesCS6D01G278300 chr6A 531700685 531709438 8753 True 1690.142857 4698 91.149571 1 7564 7 chr6A.!!$R1 7563
3 TraesCS6D01G278300 chr6B 577417449 577425382 7933 True 1324.100000 2998 90.548200 1 7632 10 chr6B.!!$R1 7631
4 TraesCS6D01G278300 chr2D 621832656 621834530 1874 True 527.000000 872 97.636000 7630 8256 2 chr2D.!!$R5 626
5 TraesCS6D01G278300 chr4B 301752918 301753473 555 False 773.000000 773 91.921000 7616 8165 1 chr4B.!!$F1 549
6 TraesCS6D01G278300 chr4B 301809459 301810014 555 False 773.000000 773 91.921000 7616 8165 1 chr4B.!!$F3 549
7 TraesCS6D01G278300 chr4B 301835791 301836345 554 False 771.000000 771 91.906000 7616 8165 1 chr4B.!!$F4 549
8 TraesCS6D01G278300 chr4B 301779975 301780530 555 False 767.000000 767 91.741000 7616 8165 1 chr4B.!!$F2 549
9 TraesCS6D01G278300 chr1D 311760317 311760935 618 False 758.000000 758 88.907000 7632 8247 1 chr1D.!!$F4 615
10 TraesCS6D01G278300 chr5D 61647716 61648331 615 False 739.000000 739 88.474000 7632 8241 1 chr5D.!!$F1 609
11 TraesCS6D01G278300 chr7D 571379847 571380465 618 False 736.000000 736 88.264000 7632 8247 1 chr7D.!!$F3 615
12 TraesCS6D01G278300 chr3A 638717241 638717759 518 False 477.000000 477 83.810000 1 507 1 chr3A.!!$F3 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
893 2310 0.695924 TGGTCAACCCATTCACCGAT 59.304 50.0 0.00 0.00 38.72 4.18 F
955 2372 1.208009 CCACCGAAAACGAACGTCGA 61.208 55.0 13.06 0.00 43.74 4.20 F
1946 3374 1.207390 CAATGTTTTGTGCGGTGGTG 58.793 50.0 0.00 0.00 0.00 4.17 F
3525 5453 0.260230 TTGTGGTTGCCTTCCCAGAA 59.740 50.0 0.00 0.00 32.14 3.02 F
3873 5813 0.034059 AGAAGGTTGAGGTGACTGCG 59.966 55.0 0.00 0.00 44.43 5.18 F
4065 6005 0.037160 TGGAAGAAAACCGGGCTACC 59.963 55.0 6.32 0.11 0.00 3.18 F
4067 6007 0.037160 GAAGAAAACCGGGCTACCCA 59.963 55.0 6.32 0.00 45.83 4.51 F
4069 6009 0.037734 AGAAAACCGGGCTACCCAAG 59.962 55.0 6.32 0.00 45.83 3.61 F
5043 6995 0.108281 GGGTTAAGGCTGACGGAGAC 60.108 60.0 0.00 0.00 0.00 3.36 F
6505 8771 0.536006 GGAAAGTGCAGCCTCTGTGT 60.536 55.0 0.00 0.00 33.43 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1939 3367 0.180171 TATGATTGCTCCCACCACCG 59.820 55.000 0.00 0.00 0.00 4.94 R
2119 3547 2.028020 GGTCCACAGAAAGTACCTCTGG 60.028 54.545 20.87 12.57 43.88 3.86 R
3854 5794 0.034059 CGCAGTCACCTCAACCTTCT 59.966 55.000 0.00 0.00 0.00 2.85 R
4919 6871 0.953471 TGTTACCATCACACAGCGCC 60.953 55.000 2.29 0.00 0.00 6.53 R
5841 7828 3.625897 CCAGGTCCACCGCACTCA 61.626 66.667 0.00 0.00 42.08 3.41 R
5989 7978 1.542030 GGTGAGAAGAAGCAGAGACGA 59.458 52.381 0.00 0.00 0.00 4.20 R
6107 8096 0.827368 GAGTTGGAGCTACCTCAGGG 59.173 60.000 0.00 0.00 39.96 4.45 R
6139 8128 4.895668 ACCGGACATCTTTTAAGTACCA 57.104 40.909 9.46 0.00 0.00 3.25 R
6602 8868 0.105039 AGTAGGAGCTATGTTGCCGC 59.895 55.000 0.00 0.00 0.00 6.53 R
7627 9985 1.130561 GCAACGGGTCATCTAGTTTGC 59.869 52.381 0.00 0.00 0.00 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.012518 GCTCAAGTGGACTATGTGCAAT 58.987 45.455 0.00 0.00 35.32 3.56
35 36 3.057315 AGTGGACTATGTGCAATGCAAAC 60.057 43.478 10.44 0.00 41.47 2.93
49 52 6.152492 TGCAATGCAAACATAACCTTGATAGA 59.848 34.615 5.01 0.00 34.76 1.98
78 82 0.908910 TTACCGGCTCATGGTGTCAT 59.091 50.000 0.00 0.00 40.73 3.06
109 113 3.446161 CCGGGTTATAGAATCGATAGCCA 59.554 47.826 15.52 0.00 33.12 4.75
170 175 8.074972 GGTCATATCGTTCGTAGAGAGTTAAAT 58.925 37.037 0.00 0.00 38.43 1.40
238 244 6.102663 TCTCTATGTGAGTTTTAGAGCTTGC 58.897 40.000 0.00 0.00 43.13 4.01
248 254 5.122396 AGTTTTAGAGCTTGCGGTTATCTTG 59.878 40.000 0.00 0.00 0.00 3.02
298 305 8.489990 AAGATTTCATATGCATCCTCTATTCG 57.510 34.615 0.19 0.00 0.00 3.34
303 311 8.450578 TTCATATGCATCCTCTATTCGTTTTT 57.549 30.769 0.19 0.00 0.00 1.94
334 342 2.734276 TTTTGCCGGTCCTTATTTGC 57.266 45.000 1.90 0.00 0.00 3.68
335 343 1.917872 TTTGCCGGTCCTTATTTGCT 58.082 45.000 1.90 0.00 0.00 3.91
410 418 9.679661 TTAATATATCCAACAAGCTTGAGTTCA 57.320 29.630 32.50 12.76 0.00 3.18
457 465 7.119262 CGGAAGTTATGACAGTTTTGGTCTTAT 59.881 37.037 0.00 0.00 36.26 1.73
480 496 6.463995 TTTGTTTTTCTGCTCCTGTTGTAT 57.536 33.333 0.00 0.00 0.00 2.29
493 509 1.138036 TTGTATCGCGCGTGCTAGT 59.862 52.632 30.98 12.11 39.65 2.57
553 569 5.589452 TGCTTGTGTGATCATGCATAACATA 59.411 36.000 0.00 0.00 41.30 2.29
575 591 3.012934 TCGTGGAGGATGAGTGTGATA 57.987 47.619 0.00 0.00 0.00 2.15
591 607 4.264614 GTGTGATAACAACATCTACGACCG 59.735 45.833 0.00 0.00 0.00 4.79
593 609 5.163591 TGTGATAACAACATCTACGACCGAT 60.164 40.000 0.00 0.00 0.00 4.18
595 611 3.861276 AACAACATCTACGACCGATGA 57.139 42.857 16.10 0.00 40.47 2.92
597 613 3.966154 ACAACATCTACGACCGATGATC 58.034 45.455 16.10 0.00 40.47 2.92
639 725 1.015868 GAGCTTGAGATGCAGCTTCC 58.984 55.000 5.67 0.00 37.79 3.46
644 730 3.743584 GCTTGAGATGCAGCTTCCAGATA 60.744 47.826 5.67 0.00 0.00 1.98
648 734 4.057432 GAGATGCAGCTTCCAGATAACTC 58.943 47.826 5.67 0.00 0.00 3.01
649 735 3.453717 AGATGCAGCTTCCAGATAACTCA 59.546 43.478 0.00 0.00 0.00 3.41
683 769 3.433615 GTGGACTCACATTGACAACTAGC 59.566 47.826 0.00 0.00 43.13 3.42
850 2267 2.481471 GGCCTTCAACCGGCTATGC 61.481 63.158 0.00 0.00 46.73 3.14
882 2299 1.067635 GTGTTGGATGCATGGTCAACC 60.068 52.381 23.08 11.94 38.81 3.77
893 2310 0.695924 TGGTCAACCCATTCACCGAT 59.304 50.000 0.00 0.00 38.72 4.18
899 2316 4.214119 GTCAACCCATTCACCGATATGATG 59.786 45.833 0.00 0.00 0.00 3.07
904 2321 3.433274 CCATTCACCGATATGATGGAACG 59.567 47.826 0.00 0.00 0.00 3.95
905 2322 2.148916 TCACCGATATGATGGAACGC 57.851 50.000 0.00 0.00 0.00 4.84
925 2342 1.978617 CCCGTTGCTCTGCCCAAAT 60.979 57.895 0.00 0.00 0.00 2.32
955 2372 1.208009 CCACCGAAAACGAACGTCGA 61.208 55.000 13.06 0.00 43.74 4.20
1623 3044 3.081061 TCGTAGTGCAAAATGCCATCTT 58.919 40.909 0.00 0.00 44.23 2.40
1704 3125 2.107204 CCCCTTGGCAGTTGCTATCTAT 59.893 50.000 3.88 0.00 41.70 1.98
1752 3179 5.841957 AATTCTTAGATGACAATGGGTGC 57.158 39.130 0.00 0.00 0.00 5.01
1939 3367 5.116377 CGTACAATGTACCAATGTTTTGTGC 59.884 40.000 16.89 0.00 29.77 4.57
1946 3374 1.207390 CAATGTTTTGTGCGGTGGTG 58.793 50.000 0.00 0.00 0.00 4.17
1951 3379 4.947147 TTGTGCGGTGGTGGGAGC 62.947 66.667 0.00 0.00 0.00 4.70
1976 3404 9.311916 GCAATCATACAGTATTATTGCCAAAAA 57.688 29.630 28.02 0.00 44.24 1.94
2017 3445 4.751600 TGTGTCATCTGATCTGTTGTGTTC 59.248 41.667 9.64 2.73 0.00 3.18
2119 3547 6.238759 GGTCAGGCCATAGATTGTTTTGTATC 60.239 42.308 5.01 0.00 37.17 2.24
2123 3551 5.827797 GGCCATAGATTGTTTTGTATCCAGA 59.172 40.000 0.00 0.00 0.00 3.86
2210 3638 3.077359 AGTCATGCACTTTCTAACTGGC 58.923 45.455 0.00 0.00 26.56 4.85
2418 4333 6.584471 AAACCCCCAAATAAGGAAAAACTT 57.416 33.333 0.00 0.00 34.52 2.66
2426 4341 7.039714 CCCAAATAAGGAAAAACTTGACTAGCT 60.040 37.037 0.00 0.00 32.02 3.32
2480 4395 1.373590 CCCGTTGCTTTATGTCCCCG 61.374 60.000 0.00 0.00 0.00 5.73
2514 4429 4.455366 CCTCGAGGTGGGTTAGGT 57.545 61.111 24.04 0.00 0.00 3.08
2537 4452 1.004927 GTGCCATTGAAGATACGACGC 60.005 52.381 0.00 0.00 0.00 5.19
2588 4503 3.537206 GAGAAGGTGCCCACTGCGT 62.537 63.158 0.00 0.00 45.60 5.24
2669 4585 0.412640 AGGGTTCGGGAGAGTTAGGT 59.587 55.000 0.00 0.00 41.75 3.08
2737 4661 1.156736 CGACCGCAAAAGGACAATCT 58.843 50.000 0.00 0.00 34.73 2.40
2755 4679 3.192954 TTTGCAAAGGTGAGCCGCG 62.193 57.895 8.05 0.00 40.50 6.46
2766 4690 0.679002 TGAGCCGCGGTCTAACTAGT 60.679 55.000 28.70 0.81 0.00 2.57
2799 4723 6.075315 TCAAGAGCTAATAGCCCAGTATGTA 58.925 40.000 8.88 0.00 43.77 2.29
2925 4850 2.441750 AGTTTGGAGGTTAAGGCTGTGA 59.558 45.455 0.00 0.00 0.00 3.58
3068 4994 4.580167 TCCAATCCTGTCTGTTCTGTTTTG 59.420 41.667 0.00 0.00 0.00 2.44
3069 4995 4.339247 CCAATCCTGTCTGTTCTGTTTTGT 59.661 41.667 0.00 0.00 0.00 2.83
3070 4996 5.163519 CCAATCCTGTCTGTTCTGTTTTGTT 60.164 40.000 0.00 0.00 0.00 2.83
3071 4997 6.332630 CAATCCTGTCTGTTCTGTTTTGTTT 58.667 36.000 0.00 0.00 0.00 2.83
3112 5038 8.701908 ATGCATTTCCATAAGATTAGACATGT 57.298 30.769 0.00 0.00 0.00 3.21
3113 5039 8.523915 TGCATTTCCATAAGATTAGACATGTT 57.476 30.769 0.00 0.00 0.00 2.71
3151 5077 1.000171 GAAGGAGCACTGCCTTTTTGG 60.000 52.381 0.00 0.00 45.43 3.28
3214 5140 2.100087 GACACGTTTTTGTGGGGAACAT 59.900 45.455 0.00 0.00 44.21 2.71
3266 5194 1.609555 CGACTAGTCTATGCCCTCACC 59.390 57.143 20.34 0.00 0.00 4.02
3439 5367 3.439540 GGCGCCGCAATTCCTTGA 61.440 61.111 12.58 0.00 34.04 3.02
3470 5398 1.683365 GCATGCCATCCCACCAGTT 60.683 57.895 6.36 0.00 0.00 3.16
3471 5399 1.952102 GCATGCCATCCCACCAGTTG 61.952 60.000 6.36 0.00 0.00 3.16
3507 5435 3.095332 GTTCGGGAGAGTTAGGGTAGTT 58.905 50.000 0.00 0.00 41.75 2.24
3518 5446 0.850784 AGGGTAGTTGTGGTTGCCTT 59.149 50.000 0.00 0.00 0.00 4.35
3525 5453 0.260230 TTGTGGTTGCCTTCCCAGAA 59.740 50.000 0.00 0.00 32.14 3.02
3542 5470 8.752005 TTCCCAGAAAAGGACTTAATATGATG 57.248 34.615 0.00 0.00 31.50 3.07
3737 5677 3.071747 GGTGGACCAGATCTATTCCTTCC 59.928 52.174 18.36 16.27 35.64 3.46
3748 5688 7.172875 CAGATCTATTCCTTCCAGTAGCAATTG 59.827 40.741 0.00 0.00 0.00 2.32
3783 5723 1.975407 ACATGCTTCAGCTGCCCAC 60.975 57.895 9.47 0.00 42.66 4.61
3817 5757 1.679139 TCATGCCAGAATAAAGCCCG 58.321 50.000 0.00 0.00 0.00 6.13
3818 5758 1.064758 TCATGCCAGAATAAAGCCCGT 60.065 47.619 0.00 0.00 0.00 5.28
3819 5759 2.171659 TCATGCCAGAATAAAGCCCGTA 59.828 45.455 0.00 0.00 0.00 4.02
3820 5760 3.149196 CATGCCAGAATAAAGCCCGTAT 58.851 45.455 0.00 0.00 0.00 3.06
3821 5761 4.041075 TCATGCCAGAATAAAGCCCGTATA 59.959 41.667 0.00 0.00 0.00 1.47
3822 5762 4.634012 TGCCAGAATAAAGCCCGTATAT 57.366 40.909 0.00 0.00 0.00 0.86
3823 5763 5.748670 TGCCAGAATAAAGCCCGTATATA 57.251 39.130 0.00 0.00 0.00 0.86
3824 5764 6.116711 TGCCAGAATAAAGCCCGTATATAA 57.883 37.500 0.00 0.00 0.00 0.98
3825 5765 6.717289 TGCCAGAATAAAGCCCGTATATAAT 58.283 36.000 0.00 0.00 0.00 1.28
3826 5766 7.172342 TGCCAGAATAAAGCCCGTATATAATT 58.828 34.615 0.00 0.00 0.00 1.40
3827 5767 7.120579 TGCCAGAATAAAGCCCGTATATAATTG 59.879 37.037 0.00 0.00 0.00 2.32
3828 5768 7.415206 GCCAGAATAAAGCCCGTATATAATTGG 60.415 40.741 0.00 0.00 0.00 3.16
3829 5769 7.415206 CCAGAATAAAGCCCGTATATAATTGGC 60.415 40.741 9.39 9.39 42.48 4.52
3830 5770 6.315393 AGAATAAAGCCCGTATATAATTGGCG 59.685 38.462 10.95 0.00 46.67 5.69
3831 5771 3.412237 AAGCCCGTATATAATTGGCGT 57.588 42.857 10.95 6.83 46.67 5.68
3832 5772 3.412237 AGCCCGTATATAATTGGCGTT 57.588 42.857 10.95 0.00 46.67 4.84
3833 5773 3.071479 AGCCCGTATATAATTGGCGTTG 58.929 45.455 10.95 0.00 46.67 4.10
3834 5774 3.068560 GCCCGTATATAATTGGCGTTGA 58.931 45.455 3.46 0.00 31.55 3.18
3835 5775 3.120442 GCCCGTATATAATTGGCGTTGAC 60.120 47.826 3.46 0.00 31.55 3.18
3836 5776 4.059511 CCCGTATATAATTGGCGTTGACA 58.940 43.478 0.00 0.00 0.00 3.58
3837 5777 4.151689 CCCGTATATAATTGGCGTTGACAG 59.848 45.833 0.00 0.00 0.00 3.51
3838 5778 4.377022 CCGTATATAATTGGCGTTGACAGC 60.377 45.833 0.00 0.00 0.00 4.40
3839 5779 3.878086 ATATAATTGGCGTTGACAGCG 57.122 42.857 7.39 7.39 35.00 5.18
3845 5785 3.777925 GCGTTGACAGCGCGATGT 61.778 61.111 32.22 32.22 45.36 3.06
3846 5786 2.094539 CGTTGACAGCGCGATGTG 59.905 61.111 36.78 16.89 32.25 3.21
3847 5787 2.371923 CGTTGACAGCGCGATGTGA 61.372 57.895 36.78 25.91 32.25 3.58
3848 5788 1.859398 GTTGACAGCGCGATGTGAA 59.141 52.632 36.78 30.50 32.25 3.18
3849 5789 0.443869 GTTGACAGCGCGATGTGAAT 59.556 50.000 36.78 10.45 32.25 2.57
3850 5790 0.721154 TTGACAGCGCGATGTGAATC 59.279 50.000 36.78 20.64 32.25 2.52
3851 5791 1.083806 TGACAGCGCGATGTGAATCC 61.084 55.000 36.78 20.23 32.25 3.01
3852 5792 1.079197 ACAGCGCGATGTGAATCCA 60.079 52.632 31.20 0.00 30.46 3.41
3853 5793 1.349627 CAGCGCGATGTGAATCCAC 59.650 57.895 17.73 0.00 43.46 4.02
3865 5805 3.077359 GTGAATCCACAGAAGGTTGAGG 58.923 50.000 0.00 0.00 42.72 3.86
3866 5806 2.711009 TGAATCCACAGAAGGTTGAGGT 59.289 45.455 0.00 0.00 31.62 3.85
3867 5807 2.867109 ATCCACAGAAGGTTGAGGTG 57.133 50.000 0.00 0.00 31.62 4.00
3868 5808 1.801242 TCCACAGAAGGTTGAGGTGA 58.199 50.000 0.00 0.00 31.62 4.02
3869 5809 1.416401 TCCACAGAAGGTTGAGGTGAC 59.584 52.381 0.00 0.00 31.62 3.67
3871 5811 2.487934 CACAGAAGGTTGAGGTGACTG 58.512 52.381 0.00 0.00 44.43 3.51
3872 5812 1.202698 ACAGAAGGTTGAGGTGACTGC 60.203 52.381 0.00 0.00 44.43 4.40
3873 5813 0.034059 AGAAGGTTGAGGTGACTGCG 59.966 55.000 0.00 0.00 44.43 5.18
3874 5814 0.951040 GAAGGTTGAGGTGACTGCGG 60.951 60.000 0.00 0.00 44.43 5.69
3875 5815 3.050275 GGTTGAGGTGACTGCGGC 61.050 66.667 0.00 0.00 44.43 6.53
3876 5816 3.414700 GTTGAGGTGACTGCGGCG 61.415 66.667 0.51 0.51 44.43 6.46
3877 5817 4.680237 TTGAGGTGACTGCGGCGG 62.680 66.667 9.78 7.39 44.43 6.13
3881 5821 4.382320 GGTGACTGCGGCGGGTTA 62.382 66.667 14.26 0.00 0.00 2.85
3882 5822 2.125269 GTGACTGCGGCGGGTTAT 60.125 61.111 14.26 0.00 0.00 1.89
3883 5823 1.142314 GTGACTGCGGCGGGTTATA 59.858 57.895 14.26 0.00 0.00 0.98
3884 5824 0.460635 GTGACTGCGGCGGGTTATAA 60.461 55.000 14.26 0.00 0.00 0.98
3885 5825 0.249676 TGACTGCGGCGGGTTATAAA 59.750 50.000 14.26 0.00 0.00 1.40
3886 5826 1.134340 TGACTGCGGCGGGTTATAAAT 60.134 47.619 14.26 0.00 0.00 1.40
3887 5827 1.263217 GACTGCGGCGGGTTATAAATG 59.737 52.381 14.26 0.00 0.00 2.32
3888 5828 1.134340 ACTGCGGCGGGTTATAAATGA 60.134 47.619 14.26 0.00 0.00 2.57
3889 5829 2.151202 CTGCGGCGGGTTATAAATGAT 58.849 47.619 9.78 0.00 0.00 2.45
3890 5830 2.147958 TGCGGCGGGTTATAAATGATC 58.852 47.619 9.78 0.00 0.00 2.92
3891 5831 1.467342 GCGGCGGGTTATAAATGATCC 59.533 52.381 9.78 0.00 0.00 3.36
3892 5832 2.081462 CGGCGGGTTATAAATGATCCC 58.919 52.381 0.00 0.00 35.22 3.85
3900 5840 5.585047 GGGTTATAAATGATCCCGTATGAGC 59.415 44.000 0.00 0.00 0.00 4.26
3901 5841 5.585047 GGTTATAAATGATCCCGTATGAGCC 59.415 44.000 0.00 0.00 0.00 4.70
3902 5842 2.169832 AAATGATCCCGTATGAGCCG 57.830 50.000 0.00 0.00 0.00 5.52
3903 5843 1.048601 AATGATCCCGTATGAGCCGT 58.951 50.000 0.00 0.00 0.00 5.68
3904 5844 0.318441 ATGATCCCGTATGAGCCGTG 59.682 55.000 0.00 0.00 0.00 4.94
3905 5845 1.040893 TGATCCCGTATGAGCCGTGT 61.041 55.000 0.00 0.00 0.00 4.49
3906 5846 0.318784 GATCCCGTATGAGCCGTGTC 60.319 60.000 0.00 0.00 0.00 3.67
3907 5847 1.040893 ATCCCGTATGAGCCGTGTCA 61.041 55.000 0.00 0.00 0.00 3.58
3908 5848 1.226974 CCCGTATGAGCCGTGTCAG 60.227 63.158 0.00 0.00 0.00 3.51
3909 5849 1.878522 CCGTATGAGCCGTGTCAGC 60.879 63.158 0.00 0.00 0.00 4.26
3910 5850 1.153842 CGTATGAGCCGTGTCAGCA 60.154 57.895 0.00 0.00 0.00 4.41
3911 5851 0.735978 CGTATGAGCCGTGTCAGCAA 60.736 55.000 0.00 0.00 0.00 3.91
3912 5852 0.721718 GTATGAGCCGTGTCAGCAAC 59.278 55.000 0.00 0.00 0.00 4.17
3913 5853 0.608130 TATGAGCCGTGTCAGCAACT 59.392 50.000 0.00 0.00 0.00 3.16
3914 5854 0.671781 ATGAGCCGTGTCAGCAACTC 60.672 55.000 0.00 0.00 0.00 3.01
3915 5855 2.356313 AGCCGTGTCAGCAACTCG 60.356 61.111 6.71 6.71 42.88 4.18
3918 5858 3.414700 CGTGTCAGCAACTCGGCC 61.415 66.667 0.00 0.00 40.31 6.13
3919 5859 2.280797 GTGTCAGCAACTCGGCCA 60.281 61.111 2.24 0.00 0.00 5.36
3920 5860 1.891919 GTGTCAGCAACTCGGCCAA 60.892 57.895 2.24 0.00 0.00 4.52
3921 5861 1.073025 TGTCAGCAACTCGGCCAAT 59.927 52.632 2.24 0.00 0.00 3.16
3922 5862 1.236616 TGTCAGCAACTCGGCCAATG 61.237 55.000 2.24 0.00 0.00 2.82
3923 5863 1.675310 TCAGCAACTCGGCCAATGG 60.675 57.895 2.24 0.00 0.00 3.16
3924 5864 1.973281 CAGCAACTCGGCCAATGGT 60.973 57.895 2.24 0.00 0.00 3.55
3925 5865 1.228552 AGCAACTCGGCCAATGGTT 60.229 52.632 2.24 0.00 0.00 3.67
3926 5866 1.212751 GCAACTCGGCCAATGGTTC 59.787 57.895 2.24 0.00 0.00 3.62
3927 5867 1.883021 CAACTCGGCCAATGGTTCC 59.117 57.895 2.24 0.00 0.00 3.62
3928 5868 0.609131 CAACTCGGCCAATGGTTCCT 60.609 55.000 2.24 0.00 0.00 3.36
3929 5869 0.112412 AACTCGGCCAATGGTTCCTT 59.888 50.000 2.24 0.00 0.00 3.36
3930 5870 0.112412 ACTCGGCCAATGGTTCCTTT 59.888 50.000 2.24 0.00 0.00 3.11
3931 5871 0.811281 CTCGGCCAATGGTTCCTTTC 59.189 55.000 2.24 0.00 0.00 2.62
3932 5872 0.111446 TCGGCCAATGGTTCCTTTCA 59.889 50.000 2.24 0.00 0.00 2.69
3933 5873 0.965439 CGGCCAATGGTTCCTTTCAA 59.035 50.000 2.24 0.00 0.00 2.69
3934 5874 1.336795 CGGCCAATGGTTCCTTTCAAC 60.337 52.381 2.24 0.00 0.00 3.18
3935 5875 1.970640 GGCCAATGGTTCCTTTCAACT 59.029 47.619 0.00 0.00 0.00 3.16
3936 5876 2.289010 GGCCAATGGTTCCTTTCAACTG 60.289 50.000 0.00 0.00 0.00 3.16
3937 5877 2.289010 GCCAATGGTTCCTTTCAACTGG 60.289 50.000 0.00 0.00 0.00 4.00
3938 5878 2.289010 CCAATGGTTCCTTTCAACTGGC 60.289 50.000 0.00 0.00 0.00 4.85
3939 5879 2.629617 CAATGGTTCCTTTCAACTGGCT 59.370 45.455 0.00 0.00 0.00 4.75
3940 5880 1.691196 TGGTTCCTTTCAACTGGCTG 58.309 50.000 0.00 0.00 0.00 4.85
3941 5881 1.064017 TGGTTCCTTTCAACTGGCTGT 60.064 47.619 0.00 0.00 0.00 4.40
3942 5882 2.031870 GGTTCCTTTCAACTGGCTGTT 58.968 47.619 3.70 3.70 39.92 3.16
3943 5883 2.430694 GGTTCCTTTCAACTGGCTGTTT 59.569 45.455 7.06 0.00 36.63 2.83
3944 5884 3.447742 GTTCCTTTCAACTGGCTGTTTG 58.552 45.455 7.06 4.08 36.63 2.93
3945 5885 3.011566 TCCTTTCAACTGGCTGTTTGA 57.988 42.857 7.06 6.23 36.63 2.69
3946 5886 3.360867 TCCTTTCAACTGGCTGTTTGAA 58.639 40.909 7.06 11.27 36.63 2.69
3947 5887 3.381272 TCCTTTCAACTGGCTGTTTGAAG 59.619 43.478 7.06 12.87 36.63 3.02
3948 5888 3.131046 CCTTTCAACTGGCTGTTTGAAGT 59.869 43.478 19.05 0.00 36.63 3.01
3949 5889 4.381932 CCTTTCAACTGGCTGTTTGAAGTT 60.382 41.667 19.05 4.23 36.63 2.66
3950 5890 5.163561 CCTTTCAACTGGCTGTTTGAAGTTA 60.164 40.000 19.05 8.78 36.63 2.24
3951 5891 5.906113 TTCAACTGGCTGTTTGAAGTTAA 57.094 34.783 7.06 0.00 36.63 2.01
3952 5892 5.243426 TCAACTGGCTGTTTGAAGTTAAC 57.757 39.130 7.06 0.00 36.63 2.01
3953 5893 4.097286 TCAACTGGCTGTTTGAAGTTAACC 59.903 41.667 7.06 0.00 36.63 2.85
3954 5894 3.626930 ACTGGCTGTTTGAAGTTAACCA 58.373 40.909 0.88 0.00 0.00 3.67
3955 5895 4.020543 ACTGGCTGTTTGAAGTTAACCAA 58.979 39.130 0.88 0.00 0.00 3.67
3956 5896 4.464597 ACTGGCTGTTTGAAGTTAACCAAA 59.535 37.500 0.88 4.06 0.00 3.28
3958 5898 4.116961 GGCTGTTTGAAGTTAACCAAACC 58.883 43.478 25.03 16.29 46.82 3.27
3959 5899 3.794564 GCTGTTTGAAGTTAACCAAACCG 59.205 43.478 25.03 21.80 46.82 4.44
3960 5900 4.675933 GCTGTTTGAAGTTAACCAAACCGT 60.676 41.667 25.03 0.00 46.82 4.83
3961 5901 5.448904 GCTGTTTGAAGTTAACCAAACCGTA 60.449 40.000 25.03 13.73 46.82 4.02
3962 5902 6.121613 TGTTTGAAGTTAACCAAACCGTAG 57.878 37.500 25.03 0.00 46.82 3.51
3963 5903 5.647225 TGTTTGAAGTTAACCAAACCGTAGT 59.353 36.000 25.03 0.00 46.82 2.73
3964 5904 5.738118 TTGAAGTTAACCAAACCGTAGTG 57.262 39.130 0.88 0.00 39.03 2.74
3965 5905 4.128643 TGAAGTTAACCAAACCGTAGTGG 58.871 43.478 0.88 0.51 46.41 4.00
3966 5906 2.497138 AGTTAACCAAACCGTAGTGGC 58.503 47.619 0.88 0.00 43.94 5.01
3967 5907 1.195222 GTTAACCAAACCGTAGTGGCG 59.805 52.381 0.00 0.00 43.94 5.69
3974 5914 2.654877 CCGTAGTGGCGGTGACTT 59.345 61.111 0.00 0.00 46.11 3.01
3975 5915 1.736645 CCGTAGTGGCGGTGACTTG 60.737 63.158 0.00 0.00 46.11 3.16
3976 5916 1.006571 CGTAGTGGCGGTGACTTGT 60.007 57.895 0.00 0.00 0.00 3.16
3977 5917 1.282248 CGTAGTGGCGGTGACTTGTG 61.282 60.000 0.00 0.00 0.00 3.33
3978 5918 1.301401 TAGTGGCGGTGACTTGTGC 60.301 57.895 0.00 0.00 0.00 4.57
3979 5919 2.034048 TAGTGGCGGTGACTTGTGCA 62.034 55.000 0.00 0.00 0.00 4.57
3980 5920 2.899838 TGGCGGTGACTTGTGCAC 60.900 61.111 10.75 10.75 35.56 4.57
3986 5926 2.928416 GTGACTTGTGCACCTACCC 58.072 57.895 15.69 0.34 0.00 3.69
3987 5927 0.107831 GTGACTTGTGCACCTACCCA 59.892 55.000 15.69 3.17 0.00 4.51
3988 5928 1.064003 TGACTTGTGCACCTACCCAT 58.936 50.000 15.69 0.00 0.00 4.00
3989 5929 1.423541 TGACTTGTGCACCTACCCATT 59.576 47.619 15.69 0.00 0.00 3.16
3990 5930 1.812571 GACTTGTGCACCTACCCATTG 59.187 52.381 15.69 0.00 0.00 2.82
3991 5931 1.423541 ACTTGTGCACCTACCCATTGA 59.576 47.619 15.69 0.00 0.00 2.57
3992 5932 2.086869 CTTGTGCACCTACCCATTGAG 58.913 52.381 15.69 0.00 0.00 3.02
3993 5933 0.322456 TGTGCACCTACCCATTGAGC 60.322 55.000 15.69 0.00 0.00 4.26
3994 5934 1.032114 GTGCACCTACCCATTGAGCC 61.032 60.000 5.22 0.00 0.00 4.70
3995 5935 1.302949 GCACCTACCCATTGAGCCA 59.697 57.895 0.00 0.00 0.00 4.75
3996 5936 1.032114 GCACCTACCCATTGAGCCAC 61.032 60.000 0.00 0.00 0.00 5.01
3997 5937 0.394352 CACCTACCCATTGAGCCACC 60.394 60.000 0.00 0.00 0.00 4.61
3998 5938 1.227383 CCTACCCATTGAGCCACCC 59.773 63.158 0.00 0.00 0.00 4.61
3999 5939 1.570857 CCTACCCATTGAGCCACCCA 61.571 60.000 0.00 0.00 0.00 4.51
4000 5940 0.331278 CTACCCATTGAGCCACCCAA 59.669 55.000 0.00 0.00 0.00 4.12
4001 5941 1.006813 TACCCATTGAGCCACCCAAT 58.993 50.000 0.00 0.00 34.83 3.16
4002 5942 0.615544 ACCCATTGAGCCACCCAATG 60.616 55.000 0.00 0.00 46.24 2.82
4003 5943 1.518774 CCATTGAGCCACCCAATGC 59.481 57.895 9.59 0.00 45.66 3.56
4004 5944 1.259142 CCATTGAGCCACCCAATGCA 61.259 55.000 9.59 0.00 45.66 3.96
4005 5945 0.174845 CATTGAGCCACCCAATGCAG 59.825 55.000 0.00 0.00 42.68 4.41
4006 5946 0.040058 ATTGAGCCACCCAATGCAGA 59.960 50.000 0.00 0.00 33.41 4.26
4007 5947 0.895100 TTGAGCCACCCAATGCAGAC 60.895 55.000 0.00 0.00 0.00 3.51
4008 5948 2.360350 AGCCACCCAATGCAGACG 60.360 61.111 0.00 0.00 0.00 4.18
4009 5949 3.443045 GCCACCCAATGCAGACGG 61.443 66.667 0.00 0.00 0.00 4.79
4010 5950 3.443045 CCACCCAATGCAGACGGC 61.443 66.667 0.00 0.00 45.13 5.68
4019 5959 4.521075 GCAGACGGCAGCTGATAA 57.479 55.556 20.43 0.00 43.97 1.75
4020 5960 2.305405 GCAGACGGCAGCTGATAAG 58.695 57.895 20.43 7.26 43.97 1.73
4021 5961 0.179100 GCAGACGGCAGCTGATAAGA 60.179 55.000 20.43 0.00 43.97 2.10
4022 5962 1.565305 CAGACGGCAGCTGATAAGAC 58.435 55.000 20.43 5.28 35.39 3.01
4023 5963 1.134995 CAGACGGCAGCTGATAAGACA 60.135 52.381 20.43 0.00 35.39 3.41
4024 5964 1.759445 AGACGGCAGCTGATAAGACAT 59.241 47.619 20.43 0.00 0.00 3.06
4025 5965 1.863454 GACGGCAGCTGATAAGACATG 59.137 52.381 20.43 0.00 0.00 3.21
4026 5966 1.482182 ACGGCAGCTGATAAGACATGA 59.518 47.619 20.43 0.00 0.00 3.07
4027 5967 2.103771 ACGGCAGCTGATAAGACATGAT 59.896 45.455 20.43 0.00 0.00 2.45
4028 5968 3.321968 ACGGCAGCTGATAAGACATGATA 59.678 43.478 20.43 0.00 0.00 2.15
4029 5969 4.202253 ACGGCAGCTGATAAGACATGATAA 60.202 41.667 20.43 0.00 0.00 1.75
4030 5970 4.151335 CGGCAGCTGATAAGACATGATAAC 59.849 45.833 20.43 0.00 0.00 1.89
4031 5971 5.303971 GGCAGCTGATAAGACATGATAACT 58.696 41.667 20.43 0.00 0.00 2.24
4032 5972 5.762218 GGCAGCTGATAAGACATGATAACTT 59.238 40.000 20.43 2.33 0.00 2.66
4033 5973 6.293298 GGCAGCTGATAAGACATGATAACTTG 60.293 42.308 20.43 0.00 0.00 3.16
4034 5974 6.656945 CAGCTGATAAGACATGATAACTTGC 58.343 40.000 8.42 0.25 0.00 4.01
4035 5975 5.762218 AGCTGATAAGACATGATAACTTGCC 59.238 40.000 0.00 0.00 0.00 4.52
4036 5976 5.762218 GCTGATAAGACATGATAACTTGCCT 59.238 40.000 0.00 0.00 0.00 4.75
4037 5977 6.073331 GCTGATAAGACATGATAACTTGCCTC 60.073 42.308 0.00 0.91 0.00 4.70
4038 5978 6.291377 TGATAAGACATGATAACTTGCCTCC 58.709 40.000 0.00 0.00 0.00 4.30
4039 5979 4.574674 AAGACATGATAACTTGCCTCCA 57.425 40.909 0.00 0.00 0.00 3.86
4040 5980 4.574674 AGACATGATAACTTGCCTCCAA 57.425 40.909 0.00 0.00 0.00 3.53
4041 5981 5.121380 AGACATGATAACTTGCCTCCAAT 57.879 39.130 0.00 0.00 0.00 3.16
4042 5982 5.513233 AGACATGATAACTTGCCTCCAATT 58.487 37.500 0.00 0.00 0.00 2.32
4043 5983 5.954150 AGACATGATAACTTGCCTCCAATTT 59.046 36.000 0.00 0.00 0.00 1.82
4044 5984 5.969423 ACATGATAACTTGCCTCCAATTTG 58.031 37.500 0.00 0.00 0.00 2.32
4045 5985 5.481473 ACATGATAACTTGCCTCCAATTTGT 59.519 36.000 0.00 0.00 0.00 2.83
4046 5986 6.014327 ACATGATAACTTGCCTCCAATTTGTT 60.014 34.615 0.00 0.00 0.00 2.83
4047 5987 5.782047 TGATAACTTGCCTCCAATTTGTTG 58.218 37.500 0.00 0.00 0.00 3.33
4048 5988 3.473923 AACTTGCCTCCAATTTGTTGG 57.526 42.857 0.76 0.76 43.40 3.77
4059 5999 3.807071 CCAATTTGTTGGAAGAAAACCGG 59.193 43.478 0.00 0.00 44.82 5.28
4060 6000 3.744238 ATTTGTTGGAAGAAAACCGGG 57.256 42.857 6.32 0.00 0.00 5.73
4061 6001 0.747852 TTGTTGGAAGAAAACCGGGC 59.252 50.000 6.32 0.00 0.00 6.13
4062 6002 0.106419 TGTTGGAAGAAAACCGGGCT 60.106 50.000 6.32 0.00 0.00 5.19
4063 6003 1.143277 TGTTGGAAGAAAACCGGGCTA 59.857 47.619 6.32 0.00 0.00 3.93
4064 6004 1.538512 GTTGGAAGAAAACCGGGCTAC 59.461 52.381 6.32 0.00 0.00 3.58
4065 6005 0.037160 TGGAAGAAAACCGGGCTACC 59.963 55.000 6.32 0.11 0.00 3.18
4066 6006 0.679002 GGAAGAAAACCGGGCTACCC 60.679 60.000 6.32 0.00 41.09 3.69
4067 6007 0.037160 GAAGAAAACCGGGCTACCCA 59.963 55.000 6.32 0.00 45.83 4.51
4068 6008 0.479378 AAGAAAACCGGGCTACCCAA 59.521 50.000 6.32 0.00 45.83 4.12
4069 6009 0.037734 AGAAAACCGGGCTACCCAAG 59.962 55.000 6.32 0.00 45.83 3.61
4080 6020 1.160137 CTACCCAAGCAGTGACTTGC 58.840 55.000 16.98 0.00 44.66 4.01
4089 6029 2.964740 GCAGTGACTTGCTCATACTCA 58.035 47.619 0.00 0.00 40.89 3.41
4090 6030 3.329386 GCAGTGACTTGCTCATACTCAA 58.671 45.455 0.00 0.00 40.89 3.02
4091 6031 3.937706 GCAGTGACTTGCTCATACTCAAT 59.062 43.478 0.00 0.00 40.89 2.57
4092 6032 5.111989 GCAGTGACTTGCTCATACTCAATA 58.888 41.667 0.00 0.00 40.89 1.90
4093 6033 5.582269 GCAGTGACTTGCTCATACTCAATAA 59.418 40.000 0.00 0.00 40.89 1.40
4094 6034 6.092670 GCAGTGACTTGCTCATACTCAATAAA 59.907 38.462 0.00 0.00 40.89 1.40
4095 6035 7.459486 CAGTGACTTGCTCATACTCAATAAAC 58.541 38.462 0.00 0.00 0.00 2.01
4096 6036 7.118245 CAGTGACTTGCTCATACTCAATAAACA 59.882 37.037 0.00 0.00 0.00 2.83
4097 6037 7.332926 AGTGACTTGCTCATACTCAATAAACAG 59.667 37.037 0.00 0.00 0.00 3.16
4098 6038 6.092670 TGACTTGCTCATACTCAATAAACAGC 59.907 38.462 0.00 0.00 0.00 4.40
4099 6039 6.176183 ACTTGCTCATACTCAATAAACAGCT 58.824 36.000 0.00 0.00 0.00 4.24
4100 6040 6.314896 ACTTGCTCATACTCAATAAACAGCTC 59.685 38.462 0.00 0.00 0.00 4.09
4101 6041 5.733676 TGCTCATACTCAATAAACAGCTCA 58.266 37.500 0.00 0.00 0.00 4.26
4102 6042 6.351711 TGCTCATACTCAATAAACAGCTCAT 58.648 36.000 0.00 0.00 0.00 2.90
4103 6043 6.259387 TGCTCATACTCAATAAACAGCTCATG 59.741 38.462 0.00 0.00 0.00 3.07
4104 6044 6.609237 TCATACTCAATAAACAGCTCATGC 57.391 37.500 0.00 0.00 40.05 4.06
4105 6045 6.114767 TCATACTCAATAAACAGCTCATGCA 58.885 36.000 0.00 0.00 42.74 3.96
4106 6046 4.959596 ACTCAATAAACAGCTCATGCAG 57.040 40.909 0.00 0.00 42.74 4.41
4107 6047 4.582869 ACTCAATAAACAGCTCATGCAGA 58.417 39.130 0.00 0.00 42.74 4.26
4108 6048 4.394300 ACTCAATAAACAGCTCATGCAGAC 59.606 41.667 0.00 0.00 42.74 3.51
4109 6049 4.325972 TCAATAAACAGCTCATGCAGACA 58.674 39.130 0.00 0.00 42.74 3.41
4110 6050 4.393990 TCAATAAACAGCTCATGCAGACAG 59.606 41.667 0.00 0.00 42.74 3.51
4111 6051 1.531423 AAACAGCTCATGCAGACAGG 58.469 50.000 0.00 0.00 42.74 4.00
4112 6052 0.399454 AACAGCTCATGCAGACAGGT 59.601 50.000 0.00 0.00 42.74 4.00
4113 6053 0.321387 ACAGCTCATGCAGACAGGTG 60.321 55.000 16.08 16.08 42.74 4.00
4114 6054 1.376942 AGCTCATGCAGACAGGTGC 60.377 57.895 0.00 0.00 44.89 5.01
4245 6185 0.667184 CAACCAAGGCCATCGCAAAC 60.667 55.000 5.01 0.00 36.38 2.93
4331 6271 3.945285 ACACAGTTTTCCAATTCACGAGT 59.055 39.130 0.00 0.00 0.00 4.18
4340 6280 0.687354 AATTCACGAGTGAGTGGCCT 59.313 50.000 3.32 0.00 42.10 5.19
4383 6323 1.665679 CGCCATGCTAGACGAAAATGT 59.334 47.619 0.00 0.00 0.00 2.71
4565 6505 5.420104 CCCCTTAGCTGATTTGAAGAAATGT 59.580 40.000 0.00 0.00 31.58 2.71
4571 6511 7.884816 AGCTGATTTGAAGAAATGTCAATTG 57.115 32.000 0.00 0.00 35.03 2.32
4814 6763 9.273016 GCTATTCATAGTGGTGAGCTAATTTAA 57.727 33.333 0.00 0.00 32.96 1.52
4925 6877 2.093764 TCATTTTTATTTGGGGGCGCTG 60.094 45.455 7.64 0.00 0.00 5.18
5008 6960 2.141312 TTTTTGGGCAAGGGGAAGC 58.859 52.632 0.00 0.00 0.00 3.86
5034 6986 3.408853 GCGGGGAGGGTTAAGGCT 61.409 66.667 0.00 0.00 0.00 4.58
5043 6995 0.108281 GGGTTAAGGCTGACGGAGAC 60.108 60.000 0.00 0.00 0.00 3.36
5576 7563 1.380785 CCATCAATGGTGGCTGCCT 60.381 57.895 21.03 0.00 43.05 4.75
5593 7580 2.298729 TGCCTCCAGTAAATGCAAAACC 59.701 45.455 0.00 0.00 0.00 3.27
5841 7828 2.759114 CCACACTGGCACCCTGAT 59.241 61.111 0.00 0.00 0.00 2.90
5920 7909 2.195567 CCAAGGCCCTGTGTGTGTG 61.196 63.158 0.00 0.00 0.00 3.82
5921 7910 2.519302 AAGGCCCTGTGTGTGTGC 60.519 61.111 0.00 0.00 0.00 4.57
6167 8156 6.500910 ACTTAAAAGATGTCCGGTTTTTGTC 58.499 36.000 0.00 0.00 0.00 3.18
6182 8171 7.275560 CCGGTTTTTGTCCTCAAATTCATATTC 59.724 37.037 0.00 0.00 42.14 1.75
6254 8517 7.229506 GCATGTAAGAGCCCTTATTTCTATGTT 59.770 37.037 0.00 0.00 37.23 2.71
6300 8563 3.678056 TCACTGTAGCTCGACCAAATT 57.322 42.857 0.00 0.00 0.00 1.82
6505 8771 0.536006 GGAAAGTGCAGCCTCTGTGT 60.536 55.000 0.00 0.00 33.43 3.72
6510 8776 1.227943 TGCAGCCTCTGTGTGGTTC 60.228 57.895 0.00 0.00 33.43 3.62
6511 8777 1.968540 GCAGCCTCTGTGTGGTTCC 60.969 63.158 0.00 0.00 33.43 3.62
6602 8868 4.389992 CCATTTGAGATATGGATCGTTCCG 59.610 45.833 7.99 0.00 45.89 4.30
6698 8964 6.206395 TCCATTGTTGTATAAACCATGCTG 57.794 37.500 0.00 0.00 0.00 4.41
6814 9080 4.735873 GCTGAGCTCATTGCCCTTTTTATC 60.736 45.833 18.63 0.00 44.23 1.75
6821 9087 6.403866 TCATTGCCCTTTTTATCGCATTAT 57.596 33.333 0.00 0.00 0.00 1.28
6822 9088 7.517614 TCATTGCCCTTTTTATCGCATTATA 57.482 32.000 0.00 0.00 0.00 0.98
6884 9150 4.553323 GTCTGTTGAAAAGCATGCTTCAT 58.447 39.130 32.01 23.45 34.84 2.57
6974 9240 4.398358 TCCTCATCTTGTCTACCTTACACG 59.602 45.833 0.00 0.00 0.00 4.49
6977 9243 3.293311 TCTTGTCTACCTTACACGCAC 57.707 47.619 0.00 0.00 0.00 5.34
7022 9288 4.330074 CAGTTGAGTGTAATCGGTGGATTC 59.670 45.833 0.00 0.00 41.88 2.52
7148 9474 9.734620 TGATTTGTTTCTCAGTCATGTAAAAAG 57.265 29.630 0.00 0.00 0.00 2.27
7182 9509 4.645136 TGTCGCTAATAATCTGAGTGGACT 59.355 41.667 0.00 0.00 0.00 3.85
7194 9521 5.526115 TCTGAGTGGACTGTTAACTTTACG 58.474 41.667 7.22 0.00 0.00 3.18
7218 9545 5.382618 ACTGCTGAGAATTTGATCAAACC 57.617 39.130 22.71 16.65 32.51 3.27
7240 9567 8.455903 AACCTGGAAGTTTTAACCTTACTAAC 57.544 34.615 0.00 0.00 0.00 2.34
7292 9619 3.791973 ACTCAAGTTATCTGAGCCTCG 57.208 47.619 0.00 0.00 33.30 4.63
7332 9667 4.970860 AGCATAGCTATGATCCAGTGTT 57.029 40.909 33.10 4.16 36.99 3.32
7435 9787 3.674997 AGCACTTGTATTGTCGAACCAT 58.325 40.909 0.00 0.00 0.00 3.55
7442 9794 7.744715 CACTTGTATTGTCGAACCATAGTTTTC 59.255 37.037 0.00 0.00 35.94 2.29
7487 9845 7.319646 TCCATTGATTTCCATTAAAGAAACCG 58.680 34.615 6.26 0.00 36.13 4.44
7503 9861 1.797025 ACCGCTAGTCTGCAAAGTTC 58.203 50.000 0.00 0.00 0.00 3.01
7564 9922 4.935205 TCCTTTGTCCATCTACAAATCACG 59.065 41.667 2.91 0.00 45.58 4.35
7577 9935 7.531716 TCTACAAATCACGTGAAACAAAAGTT 58.468 30.769 24.13 6.64 35.74 2.66
7578 9936 6.626199 ACAAATCACGTGAAACAAAAGTTC 57.374 33.333 24.13 0.00 35.74 3.01
7589 9947 7.027161 GTGAAACAAAAGTTCTTAGCACTTGA 58.973 34.615 0.00 0.00 33.57 3.02
7600 9958 5.012239 TCTTAGCACTTGAAATGATGGCTT 58.988 37.500 0.00 0.00 0.00 4.35
7601 9959 3.587797 AGCACTTGAAATGATGGCTTG 57.412 42.857 0.00 0.00 0.00 4.01
7613 9971 3.495331 TGATGGCTTGTACAACCACATT 58.505 40.909 23.48 13.46 35.99 2.71
7627 9985 3.788333 CCACATTTGGCCTCTGTTATG 57.212 47.619 3.32 1.22 35.56 1.90
7713 10071 9.709495 AGAATGTGCATTAACATATTGTTGTTT 57.291 25.926 3.22 0.00 41.30 2.83
7740 10103 7.767745 AAAGATCATGATACTATATGCAGCG 57.232 36.000 8.54 0.00 0.00 5.18
7775 10138 4.625311 GTCATACACACACGATTGTCATGA 59.375 41.667 0.00 0.00 31.66 3.07
8223 11833 7.115378 GCAAGATCAAACCAAGTATTCAAACAG 59.885 37.037 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.339055 TGCACATAGTCCACTTGAGCC 60.339 52.381 0.00 0.00 0.00 4.70
29 30 9.023962 AGAAAATCTATCAAGGTTATGTTTGCA 57.976 29.630 0.00 0.00 0.00 4.08
49 52 5.163195 ACCATGAGCCGGTAAGATAGAAAAT 60.163 40.000 1.90 0.00 34.02 1.82
78 82 3.119009 TCTATAACCCGGTCTCCCAAA 57.881 47.619 0.00 0.00 0.00 3.28
109 113 3.785364 GAGAGCCCTCCCTTGATAGTAT 58.215 50.000 0.00 0.00 33.30 2.12
170 175 3.516300 AGATGATGCCAAGGATGCAAAAA 59.484 39.130 0.00 0.00 42.92 1.94
238 244 5.188327 TGAGCTAGTCATCAAGATAACCG 57.812 43.478 0.00 0.00 0.00 4.44
248 254 6.974932 TTTGATGAACTTGAGCTAGTCATC 57.025 37.500 15.21 15.21 34.17 2.92
297 304 5.333721 GGCAAAATATCCAACACCAAAAACG 60.334 40.000 0.00 0.00 0.00 3.60
298 305 5.333721 CGGCAAAATATCCAACACCAAAAAC 60.334 40.000 0.00 0.00 0.00 2.43
303 311 1.821753 CCGGCAAAATATCCAACACCA 59.178 47.619 0.00 0.00 0.00 4.17
410 418 4.984161 CCGCAAACAAACTCAGAAATCAAT 59.016 37.500 0.00 0.00 0.00 2.57
457 465 4.799564 ACAACAGGAGCAGAAAAACAAA 57.200 36.364 0.00 0.00 0.00 2.83
480 496 4.351938 AACCACTAGCACGCGCGA 62.352 61.111 39.36 13.65 45.49 5.87
493 509 0.981183 AGGATTGAGCGGTACAACCA 59.019 50.000 0.00 0.00 38.47 3.67
553 569 2.179427 TCACACTCATCCTCCACGATT 58.821 47.619 0.00 0.00 0.00 3.34
575 591 3.861276 TCATCGGTCGTAGATGTTGTT 57.139 42.857 13.80 0.00 44.20 2.83
617 634 0.464870 AGCTGCATCTCAAGCTCGAT 59.535 50.000 1.02 0.00 31.18 3.59
619 636 0.651551 GAAGCTGCATCTCAAGCTCG 59.348 55.000 1.02 0.00 36.51 5.03
639 725 4.934001 ACATGTGCTCAACTGAGTTATCTG 59.066 41.667 0.00 3.62 43.85 2.90
644 730 2.158769 TCCACATGTGCTCAACTGAGTT 60.159 45.455 20.81 0.00 43.85 3.01
648 734 1.802960 GAGTCCACATGTGCTCAACTG 59.197 52.381 20.81 5.01 0.00 3.16
649 735 1.417517 TGAGTCCACATGTGCTCAACT 59.582 47.619 25.05 20.71 35.36 3.16
683 769 5.998454 AAGGAAATGAAGCGATACATCTG 57.002 39.130 0.00 0.00 0.00 2.90
744 2160 9.987901 CACGTGTGAATAAAAACATTCAAATAC 57.012 29.630 7.58 1.31 44.36 1.89
850 2267 3.624861 GCATCCAACACAATCTAGTCTGG 59.375 47.826 0.00 0.00 0.00 3.86
856 2273 3.947196 GACCATGCATCCAACACAATCTA 59.053 43.478 0.00 0.00 0.00 1.98
882 2299 3.433274 CGTTCCATCATATCGGTGAATGG 59.567 47.826 0.00 0.00 32.64 3.16
886 2303 1.270094 GGCGTTCCATCATATCGGTGA 60.270 52.381 0.00 0.00 0.00 4.02
893 2310 1.628238 AACGGGGGCGTTCCATCATA 61.628 55.000 0.00 0.00 37.22 2.15
955 2372 1.474077 GTTCTTTTGGCCGATGAGCAT 59.526 47.619 0.00 0.00 0.00 3.79
965 2382 1.460273 TTGGGGCGAGTTCTTTTGGC 61.460 55.000 0.00 0.00 0.00 4.52
1564 2985 9.567776 TTGTCAAATAATATACACCCAGGTATG 57.432 33.333 0.00 0.00 35.64 2.39
1567 2988 8.912988 CAATTGTCAAATAATATACACCCAGGT 58.087 33.333 0.00 0.00 0.00 4.00
1623 3044 6.499106 TTGCAATTCCTCTATGACCTATCA 57.501 37.500 0.00 0.00 39.83 2.15
1752 3179 8.622948 AACTATCAAAACTAGAGTTTCCTTGG 57.377 34.615 8.06 3.01 46.47 3.61
1939 3367 0.180171 TATGATTGCTCCCACCACCG 59.820 55.000 0.00 0.00 0.00 4.94
1976 3404 5.105106 TGACACAGGAATTATCACATACCGT 60.105 40.000 0.00 0.00 0.00 4.83
2017 3445 3.365264 GCACATGTATGCATAATCCGTGG 60.365 47.826 19.91 11.07 45.39 4.94
2119 3547 2.028020 GGTCCACAGAAAGTACCTCTGG 60.028 54.545 20.87 12.57 43.88 3.86
2123 3551 2.972348 TCAGGTCCACAGAAAGTACCT 58.028 47.619 0.00 0.00 39.31 3.08
2210 3638 5.286082 GGATTCGAAATTTGTTGTTCGGATG 59.714 40.000 0.00 0.00 43.75 3.51
2418 4333 2.752030 AGTGAGGGCATAAGCTAGTCA 58.248 47.619 0.00 0.00 41.70 3.41
2605 4521 4.538746 TTGCATGCTTTCAATGGAATCA 57.461 36.364 20.33 0.00 31.93 2.57
2737 4661 2.727544 GCGGCTCACCTTTGCAAA 59.272 55.556 12.14 12.14 0.00 3.68
2755 4679 3.128242 TGAACTGCGCTACTAGTTAGACC 59.872 47.826 9.73 0.00 37.27 3.85
2766 4690 3.526931 ATTAGCTCTTGAACTGCGCTA 57.473 42.857 9.73 0.00 32.49 4.26
2799 4723 5.132816 AGCCTAACCTCCAAACTAAGCATAT 59.867 40.000 0.00 0.00 0.00 1.78
2925 4850 5.402630 AGTCCCCCAGAATACAAAACAATT 58.597 37.500 0.00 0.00 0.00 2.32
3070 4996 9.780413 GGAAATGCATAAAGAAAACAAAACAAA 57.220 25.926 0.00 0.00 0.00 2.83
3071 4997 8.950210 TGGAAATGCATAAAGAAAACAAAACAA 58.050 25.926 0.00 0.00 0.00 2.83
3132 5058 1.043022 CCAAAAAGGCAGTGCTCCTT 58.957 50.000 16.11 7.96 45.31 3.36
3205 5131 1.327303 GTTTCAGCACATGTTCCCCA 58.673 50.000 0.00 0.00 0.00 4.96
3214 5140 2.685106 TATTTGGGGGTTTCAGCACA 57.315 45.000 0.00 0.00 0.00 4.57
3266 5194 1.602323 TTTGCCAGGTAACCGCCAG 60.602 57.895 0.00 0.00 37.17 4.85
3430 5358 5.305128 TGCTTTCAATGGAGTTCAAGGAATT 59.695 36.000 0.00 0.00 0.00 2.17
3439 5367 2.250031 TGGCATGCTTTCAATGGAGTT 58.750 42.857 18.92 0.00 0.00 3.01
3507 5435 0.260230 TTTCTGGGAAGGCAACCACA 59.740 50.000 2.72 0.00 32.33 4.17
3518 5446 6.772716 GCATCATATTAAGTCCTTTTCTGGGA 59.227 38.462 0.00 0.00 0.00 4.37
3525 5453 4.829492 GCCTGGCATCATATTAAGTCCTTT 59.171 41.667 15.17 0.00 0.00 3.11
3737 5677 4.232221 CTGCCTTTTCACAATTGCTACTG 58.768 43.478 5.05 0.00 0.00 2.74
3748 5688 0.961019 TGTGATGCCTGCCTTTTCAC 59.039 50.000 0.00 0.00 37.73 3.18
3783 5723 1.195448 GCATGATAATTGGAGCGGACG 59.805 52.381 0.00 0.00 0.00 4.79
3817 5757 4.698276 CGCTGTCAACGCCAATTATATAC 58.302 43.478 0.00 0.00 0.00 1.47
3818 5758 4.983215 CGCTGTCAACGCCAATTATATA 57.017 40.909 0.00 0.00 0.00 0.86
3819 5759 3.878086 CGCTGTCAACGCCAATTATAT 57.122 42.857 0.00 0.00 0.00 0.86
3829 5769 1.885814 TTCACATCGCGCTGTCAACG 61.886 55.000 13.46 2.06 0.00 4.10
3830 5770 0.443869 ATTCACATCGCGCTGTCAAC 59.556 50.000 13.46 0.00 0.00 3.18
3831 5771 0.721154 GATTCACATCGCGCTGTCAA 59.279 50.000 13.46 7.34 0.00 3.18
3832 5772 1.083806 GGATTCACATCGCGCTGTCA 61.084 55.000 13.46 0.00 0.00 3.58
3833 5773 1.083806 TGGATTCACATCGCGCTGTC 61.084 55.000 13.46 1.62 0.00 3.51
3834 5774 1.079197 TGGATTCACATCGCGCTGT 60.079 52.632 10.26 10.26 0.00 4.40
3835 5775 1.349627 GTGGATTCACATCGCGCTG 59.650 57.895 8.66 8.66 43.13 5.18
3836 5776 3.799753 GTGGATTCACATCGCGCT 58.200 55.556 5.56 0.00 43.13 5.92
3844 5784 3.077359 CCTCAACCTTCTGTGGATTCAC 58.923 50.000 0.00 0.00 43.87 3.18
3845 5785 2.711009 ACCTCAACCTTCTGTGGATTCA 59.289 45.455 0.00 0.00 34.65 2.57
3846 5786 3.077359 CACCTCAACCTTCTGTGGATTC 58.923 50.000 0.00 0.00 34.65 2.52
3847 5787 2.711009 TCACCTCAACCTTCTGTGGATT 59.289 45.455 0.00 0.00 34.65 3.01
3848 5788 2.039084 GTCACCTCAACCTTCTGTGGAT 59.961 50.000 0.00 0.00 34.65 3.41
3849 5789 1.416401 GTCACCTCAACCTTCTGTGGA 59.584 52.381 0.00 0.00 34.65 4.02
3850 5790 1.417890 AGTCACCTCAACCTTCTGTGG 59.582 52.381 0.00 0.00 36.29 4.17
3851 5791 2.487934 CAGTCACCTCAACCTTCTGTG 58.512 52.381 0.00 0.00 0.00 3.66
3852 5792 1.202698 GCAGTCACCTCAACCTTCTGT 60.203 52.381 0.00 0.00 0.00 3.41
3853 5793 1.517242 GCAGTCACCTCAACCTTCTG 58.483 55.000 0.00 0.00 0.00 3.02
3854 5794 0.034059 CGCAGTCACCTCAACCTTCT 59.966 55.000 0.00 0.00 0.00 2.85
3855 5795 0.951040 CCGCAGTCACCTCAACCTTC 60.951 60.000 0.00 0.00 0.00 3.46
3856 5796 1.071471 CCGCAGTCACCTCAACCTT 59.929 57.895 0.00 0.00 0.00 3.50
3857 5797 2.743718 CCGCAGTCACCTCAACCT 59.256 61.111 0.00 0.00 0.00 3.50
3858 5798 3.050275 GCCGCAGTCACCTCAACC 61.050 66.667 0.00 0.00 0.00 3.77
3859 5799 3.414700 CGCCGCAGTCACCTCAAC 61.415 66.667 0.00 0.00 0.00 3.18
3860 5800 4.680237 CCGCCGCAGTCACCTCAA 62.680 66.667 0.00 0.00 0.00 3.02
3864 5804 2.300850 TATAACCCGCCGCAGTCACC 62.301 60.000 0.00 0.00 0.00 4.02
3865 5805 0.460635 TTATAACCCGCCGCAGTCAC 60.461 55.000 0.00 0.00 0.00 3.67
3866 5806 0.249676 TTTATAACCCGCCGCAGTCA 59.750 50.000 0.00 0.00 0.00 3.41
3867 5807 1.263217 CATTTATAACCCGCCGCAGTC 59.737 52.381 0.00 0.00 0.00 3.51
3868 5808 1.134340 TCATTTATAACCCGCCGCAGT 60.134 47.619 0.00 0.00 0.00 4.40
3869 5809 1.588674 TCATTTATAACCCGCCGCAG 58.411 50.000 0.00 0.00 0.00 5.18
3870 5810 2.147958 GATCATTTATAACCCGCCGCA 58.852 47.619 0.00 0.00 0.00 5.69
3871 5811 1.467342 GGATCATTTATAACCCGCCGC 59.533 52.381 0.00 0.00 0.00 6.53
3872 5812 2.081462 GGGATCATTTATAACCCGCCG 58.919 52.381 0.00 0.00 0.00 6.46
3876 5816 5.585047 GCTCATACGGGATCATTTATAACCC 59.415 44.000 0.00 0.00 37.42 4.11
3877 5817 5.585047 GGCTCATACGGGATCATTTATAACC 59.415 44.000 0.00 0.00 0.00 2.85
3878 5818 5.291128 CGGCTCATACGGGATCATTTATAAC 59.709 44.000 0.00 0.00 0.00 1.89
3879 5819 5.046878 ACGGCTCATACGGGATCATTTATAA 60.047 40.000 0.00 0.00 35.23 0.98
3880 5820 4.464951 ACGGCTCATACGGGATCATTTATA 59.535 41.667 0.00 0.00 35.23 0.98
3881 5821 3.260884 ACGGCTCATACGGGATCATTTAT 59.739 43.478 0.00 0.00 35.23 1.40
3882 5822 2.631062 ACGGCTCATACGGGATCATTTA 59.369 45.455 0.00 0.00 35.23 1.40
3883 5823 1.416401 ACGGCTCATACGGGATCATTT 59.584 47.619 0.00 0.00 35.23 2.32
3884 5824 1.048601 ACGGCTCATACGGGATCATT 58.951 50.000 0.00 0.00 35.23 2.57
3885 5825 0.318441 CACGGCTCATACGGGATCAT 59.682 55.000 0.00 0.00 36.74 2.45
3886 5826 1.040893 ACACGGCTCATACGGGATCA 61.041 55.000 0.00 0.00 38.31 2.92
3887 5827 0.318784 GACACGGCTCATACGGGATC 60.319 60.000 0.00 0.00 38.31 3.36
3888 5828 1.040893 TGACACGGCTCATACGGGAT 61.041 55.000 0.00 0.00 38.31 3.85
3889 5829 1.663379 CTGACACGGCTCATACGGGA 61.663 60.000 0.00 0.00 38.31 5.14
3890 5830 1.226974 CTGACACGGCTCATACGGG 60.227 63.158 0.00 0.00 41.32 5.28
3891 5831 1.878522 GCTGACACGGCTCATACGG 60.879 63.158 0.00 0.00 35.23 4.02
3892 5832 0.735978 TTGCTGACACGGCTCATACG 60.736 55.000 0.00 0.00 36.58 3.06
3893 5833 0.721718 GTTGCTGACACGGCTCATAC 59.278 55.000 0.00 0.00 36.58 2.39
3894 5834 0.608130 AGTTGCTGACACGGCTCATA 59.392 50.000 0.00 0.00 36.58 2.15
3895 5835 0.671781 GAGTTGCTGACACGGCTCAT 60.672 55.000 0.00 0.00 36.58 2.90
3896 5836 1.300931 GAGTTGCTGACACGGCTCA 60.301 57.895 0.00 0.00 36.58 4.26
3897 5837 2.375766 CGAGTTGCTGACACGGCTC 61.376 63.158 0.00 0.00 38.46 4.70
3898 5838 2.356313 CGAGTTGCTGACACGGCT 60.356 61.111 0.00 0.00 38.46 5.52
3901 5841 3.414700 GGCCGAGTTGCTGACACG 61.415 66.667 0.00 4.29 41.23 4.49
3902 5842 1.237285 ATTGGCCGAGTTGCTGACAC 61.237 55.000 0.00 0.00 0.00 3.67
3903 5843 1.073025 ATTGGCCGAGTTGCTGACA 59.927 52.632 0.00 0.00 0.00 3.58
3904 5844 1.503542 CATTGGCCGAGTTGCTGAC 59.496 57.895 0.00 0.00 0.00 3.51
3905 5845 1.675310 CCATTGGCCGAGTTGCTGA 60.675 57.895 0.00 0.00 0.00 4.26
3906 5846 1.526575 AACCATTGGCCGAGTTGCTG 61.527 55.000 1.54 0.00 0.00 4.41
3907 5847 1.228552 AACCATTGGCCGAGTTGCT 60.229 52.632 1.54 0.00 0.00 3.91
3908 5848 1.212751 GAACCATTGGCCGAGTTGC 59.787 57.895 1.54 0.00 0.00 4.17
3909 5849 0.609131 AGGAACCATTGGCCGAGTTG 60.609 55.000 1.54 0.00 0.00 3.16
3910 5850 0.112412 AAGGAACCATTGGCCGAGTT 59.888 50.000 1.54 0.00 0.00 3.01
3911 5851 0.112412 AAAGGAACCATTGGCCGAGT 59.888 50.000 1.54 0.00 0.00 4.18
3912 5852 0.811281 GAAAGGAACCATTGGCCGAG 59.189 55.000 1.54 0.00 0.00 4.63
3913 5853 0.111446 TGAAAGGAACCATTGGCCGA 59.889 50.000 1.54 0.00 0.00 5.54
3914 5854 0.965439 TTGAAAGGAACCATTGGCCG 59.035 50.000 1.54 0.00 0.00 6.13
3915 5855 1.970640 AGTTGAAAGGAACCATTGGCC 59.029 47.619 1.54 0.00 0.00 5.36
3916 5856 2.289010 CCAGTTGAAAGGAACCATTGGC 60.289 50.000 1.54 0.00 0.00 4.52
3917 5857 2.289010 GCCAGTTGAAAGGAACCATTGG 60.289 50.000 0.00 0.00 0.00 3.16
3918 5858 2.629617 AGCCAGTTGAAAGGAACCATTG 59.370 45.455 0.00 0.00 0.00 2.82
3919 5859 2.629617 CAGCCAGTTGAAAGGAACCATT 59.370 45.455 0.00 0.00 0.00 3.16
3920 5860 2.242043 CAGCCAGTTGAAAGGAACCAT 58.758 47.619 0.00 0.00 0.00 3.55
3921 5861 1.064017 ACAGCCAGTTGAAAGGAACCA 60.064 47.619 0.00 0.00 0.00 3.67
3922 5862 1.692411 ACAGCCAGTTGAAAGGAACC 58.308 50.000 0.00 0.00 0.00 3.62
3923 5863 3.130340 TCAAACAGCCAGTTGAAAGGAAC 59.870 43.478 0.00 0.00 41.19 3.62
3924 5864 3.360867 TCAAACAGCCAGTTGAAAGGAA 58.639 40.909 0.00 0.00 41.19 3.36
3925 5865 3.011566 TCAAACAGCCAGTTGAAAGGA 57.988 42.857 0.00 0.00 41.19 3.36
3926 5866 3.131046 ACTTCAAACAGCCAGTTGAAAGG 59.869 43.478 13.83 5.76 41.19 3.11
3927 5867 4.376340 ACTTCAAACAGCCAGTTGAAAG 57.624 40.909 7.46 9.03 41.19 2.62
3928 5868 4.799564 AACTTCAAACAGCCAGTTGAAA 57.200 36.364 7.46 0.00 41.19 2.69
3929 5869 5.393678 GGTTAACTTCAAACAGCCAGTTGAA 60.394 40.000 5.42 6.24 41.19 2.69
3930 5870 4.097286 GGTTAACTTCAAACAGCCAGTTGA 59.903 41.667 5.42 0.00 41.19 3.18
3931 5871 4.142271 TGGTTAACTTCAAACAGCCAGTTG 60.142 41.667 5.42 0.00 41.19 3.16
3932 5872 4.020543 TGGTTAACTTCAAACAGCCAGTT 58.979 39.130 5.42 0.00 43.89 3.16
3933 5873 3.626930 TGGTTAACTTCAAACAGCCAGT 58.373 40.909 5.42 0.00 0.00 4.00
3934 5874 4.647424 TTGGTTAACTTCAAACAGCCAG 57.353 40.909 5.42 0.00 0.00 4.85
3935 5875 4.749976 GTTTGGTTAACTTCAAACAGCCA 58.250 39.130 24.02 3.58 46.88 4.75
3940 5880 5.967088 CACTACGGTTTGGTTAACTTCAAAC 59.033 40.000 22.26 22.26 46.92 2.93
3941 5881 5.066246 CCACTACGGTTTGGTTAACTTCAAA 59.934 40.000 5.42 5.81 36.93 2.69
3942 5882 4.575645 CCACTACGGTTTGGTTAACTTCAA 59.424 41.667 5.42 0.00 36.93 2.69
3943 5883 4.128643 CCACTACGGTTTGGTTAACTTCA 58.871 43.478 5.42 0.00 36.93 3.02
3944 5884 3.058708 GCCACTACGGTTTGGTTAACTTC 60.059 47.826 5.42 0.00 36.93 3.01
3945 5885 2.880268 GCCACTACGGTTTGGTTAACTT 59.120 45.455 5.42 0.00 36.93 2.66
3946 5886 2.497138 GCCACTACGGTTTGGTTAACT 58.503 47.619 5.42 0.00 36.93 2.24
3947 5887 1.195222 CGCCACTACGGTTTGGTTAAC 59.805 52.381 9.48 0.00 36.97 2.01
3948 5888 1.510776 CGCCACTACGGTTTGGTTAA 58.489 50.000 9.48 0.00 36.97 2.01
3949 5889 3.214045 CGCCACTACGGTTTGGTTA 57.786 52.632 9.48 0.00 36.97 2.85
3950 5890 4.052519 CGCCACTACGGTTTGGTT 57.947 55.556 9.48 0.00 36.97 3.67
3958 5898 1.006571 ACAAGTCACCGCCACTACG 60.007 57.895 0.00 0.00 0.00 3.51
3959 5899 1.566018 GCACAAGTCACCGCCACTAC 61.566 60.000 0.00 0.00 0.00 2.73
3960 5900 1.301401 GCACAAGTCACCGCCACTA 60.301 57.895 0.00 0.00 0.00 2.74
3961 5901 2.591715 GCACAAGTCACCGCCACT 60.592 61.111 0.00 0.00 0.00 4.00
3962 5902 2.899838 TGCACAAGTCACCGCCAC 60.900 61.111 0.00 0.00 0.00 5.01
3963 5903 2.899838 GTGCACAAGTCACCGCCA 60.900 61.111 13.17 0.00 0.00 5.69
3964 5904 3.660111 GGTGCACAAGTCACCGCC 61.660 66.667 20.43 0.00 43.75 6.13
3968 5908 0.107831 TGGGTAGGTGCACAAGTCAC 59.892 55.000 20.43 7.47 0.00 3.67
3969 5909 1.064003 ATGGGTAGGTGCACAAGTCA 58.936 50.000 20.43 10.11 0.00 3.41
3970 5910 1.812571 CAATGGGTAGGTGCACAAGTC 59.187 52.381 20.43 5.08 0.00 3.01
3971 5911 1.423541 TCAATGGGTAGGTGCACAAGT 59.576 47.619 20.43 4.93 0.00 3.16
3972 5912 2.086869 CTCAATGGGTAGGTGCACAAG 58.913 52.381 20.43 0.00 0.00 3.16
3973 5913 1.886222 GCTCAATGGGTAGGTGCACAA 60.886 52.381 20.43 2.63 0.00 3.33
3974 5914 0.322456 GCTCAATGGGTAGGTGCACA 60.322 55.000 20.43 0.00 0.00 4.57
3975 5915 1.032114 GGCTCAATGGGTAGGTGCAC 61.032 60.000 8.80 8.80 0.00 4.57
3976 5916 1.302949 GGCTCAATGGGTAGGTGCA 59.697 57.895 0.00 0.00 0.00 4.57
3977 5917 1.032114 GTGGCTCAATGGGTAGGTGC 61.032 60.000 0.00 0.00 0.00 5.01
3978 5918 0.394352 GGTGGCTCAATGGGTAGGTG 60.394 60.000 0.00 0.00 0.00 4.00
3979 5919 1.571773 GGGTGGCTCAATGGGTAGGT 61.572 60.000 0.00 0.00 0.00 3.08
3980 5920 1.227383 GGGTGGCTCAATGGGTAGG 59.773 63.158 0.00 0.00 0.00 3.18
3981 5921 0.331278 TTGGGTGGCTCAATGGGTAG 59.669 55.000 0.00 0.00 0.00 3.18
3982 5922 1.006813 ATTGGGTGGCTCAATGGGTA 58.993 50.000 0.00 0.00 34.01 3.69
3983 5923 0.615544 CATTGGGTGGCTCAATGGGT 60.616 55.000 12.50 0.00 44.44 4.51
3984 5924 1.963464 GCATTGGGTGGCTCAATGGG 61.963 60.000 19.44 0.55 46.75 4.00
3985 5925 1.259142 TGCATTGGGTGGCTCAATGG 61.259 55.000 19.44 5.66 46.75 3.16
3987 5927 0.040058 TCTGCATTGGGTGGCTCAAT 59.960 50.000 0.00 0.00 35.45 2.57
3988 5928 0.895100 GTCTGCATTGGGTGGCTCAA 60.895 55.000 0.00 0.00 0.00 3.02
3989 5929 1.303561 GTCTGCATTGGGTGGCTCA 60.304 57.895 0.00 0.00 0.00 4.26
3990 5930 2.401766 CGTCTGCATTGGGTGGCTC 61.402 63.158 0.00 0.00 0.00 4.70
3991 5931 2.360350 CGTCTGCATTGGGTGGCT 60.360 61.111 0.00 0.00 0.00 4.75
3992 5932 3.443045 CCGTCTGCATTGGGTGGC 61.443 66.667 0.00 0.00 0.00 5.01
3993 5933 3.443045 GCCGTCTGCATTGGGTGG 61.443 66.667 0.00 0.00 40.77 4.61
4002 5942 0.179100 TCTTATCAGCTGCCGTCTGC 60.179 55.000 9.47 0.00 41.77 4.26
4003 5943 1.134995 TGTCTTATCAGCTGCCGTCTG 60.135 52.381 9.47 0.00 0.00 3.51
4004 5944 1.186200 TGTCTTATCAGCTGCCGTCT 58.814 50.000 9.47 0.00 0.00 4.18
4005 5945 1.863454 CATGTCTTATCAGCTGCCGTC 59.137 52.381 9.47 0.00 0.00 4.79
4006 5946 1.482182 TCATGTCTTATCAGCTGCCGT 59.518 47.619 9.47 0.00 0.00 5.68
4007 5947 2.229675 TCATGTCTTATCAGCTGCCG 57.770 50.000 9.47 0.00 0.00 5.69
4008 5948 5.303971 AGTTATCATGTCTTATCAGCTGCC 58.696 41.667 9.47 0.00 0.00 4.85
4009 5949 6.656945 CAAGTTATCATGTCTTATCAGCTGC 58.343 40.000 9.47 0.00 0.00 5.25
4010 5950 6.293298 GGCAAGTTATCATGTCTTATCAGCTG 60.293 42.308 7.63 7.63 0.00 4.24
4011 5951 5.762218 GGCAAGTTATCATGTCTTATCAGCT 59.238 40.000 0.00 0.00 0.00 4.24
4012 5952 5.762218 AGGCAAGTTATCATGTCTTATCAGC 59.238 40.000 0.00 0.00 0.00 4.26
4013 5953 6.426328 GGAGGCAAGTTATCATGTCTTATCAG 59.574 42.308 0.00 0.00 30.18 2.90
4014 5954 6.126796 TGGAGGCAAGTTATCATGTCTTATCA 60.127 38.462 0.00 0.00 30.18 2.15
4015 5955 6.291377 TGGAGGCAAGTTATCATGTCTTATC 58.709 40.000 0.00 0.00 30.18 1.75
4016 5956 6.252599 TGGAGGCAAGTTATCATGTCTTAT 57.747 37.500 0.00 0.00 30.18 1.73
4017 5957 5.692115 TGGAGGCAAGTTATCATGTCTTA 57.308 39.130 0.00 0.00 30.18 2.10
4018 5958 4.574674 TGGAGGCAAGTTATCATGTCTT 57.425 40.909 0.00 0.00 30.18 3.01
4019 5959 4.574674 TTGGAGGCAAGTTATCATGTCT 57.425 40.909 0.00 0.00 33.37 3.41
4020 5960 5.841957 AATTGGAGGCAAGTTATCATGTC 57.158 39.130 0.00 0.00 0.00 3.06
4021 5961 5.481473 ACAAATTGGAGGCAAGTTATCATGT 59.519 36.000 0.00 0.00 0.00 3.21
4022 5962 5.969423 ACAAATTGGAGGCAAGTTATCATG 58.031 37.500 0.00 0.00 0.00 3.07
4023 5963 6.400568 CAACAAATTGGAGGCAAGTTATCAT 58.599 36.000 0.00 0.00 31.63 2.45
4024 5964 5.782047 CAACAAATTGGAGGCAAGTTATCA 58.218 37.500 0.00 0.00 31.63 2.15
4038 5978 3.807071 CCCGGTTTTCTTCCAACAAATTG 59.193 43.478 0.00 0.00 35.40 2.32
4039 5979 3.742954 GCCCGGTTTTCTTCCAACAAATT 60.743 43.478 0.00 0.00 0.00 1.82
4040 5980 2.224185 GCCCGGTTTTCTTCCAACAAAT 60.224 45.455 0.00 0.00 0.00 2.32
4041 5981 1.137282 GCCCGGTTTTCTTCCAACAAA 59.863 47.619 0.00 0.00 0.00 2.83
4042 5982 0.747852 GCCCGGTTTTCTTCCAACAA 59.252 50.000 0.00 0.00 0.00 2.83
4043 5983 0.106419 AGCCCGGTTTTCTTCCAACA 60.106 50.000 0.00 0.00 0.00 3.33
4044 5984 1.538512 GTAGCCCGGTTTTCTTCCAAC 59.461 52.381 0.00 0.00 0.00 3.77
4045 5985 1.546099 GGTAGCCCGGTTTTCTTCCAA 60.546 52.381 0.00 0.00 0.00 3.53
4046 5986 0.037160 GGTAGCCCGGTTTTCTTCCA 59.963 55.000 0.00 0.00 0.00 3.53
4047 5987 0.679002 GGGTAGCCCGGTTTTCTTCC 60.679 60.000 0.00 0.00 32.13 3.46
4048 5988 2.864114 GGGTAGCCCGGTTTTCTTC 58.136 57.895 0.00 0.00 32.13 2.87
4061 6001 1.160137 GCAAGTCACTGCTTGGGTAG 58.840 55.000 12.33 0.00 44.29 3.18
4062 6002 3.322514 GCAAGTCACTGCTTGGGTA 57.677 52.632 12.33 0.00 44.29 3.69
4063 6003 4.164258 GCAAGTCACTGCTTGGGT 57.836 55.556 12.33 0.00 44.29 4.51
4069 6009 2.964740 TGAGTATGAGCAAGTCACTGC 58.035 47.619 0.00 0.00 38.28 4.40
4070 6010 7.118245 TGTTTATTGAGTATGAGCAAGTCACTG 59.882 37.037 0.00 0.00 38.28 3.66
4071 6011 7.161404 TGTTTATTGAGTATGAGCAAGTCACT 58.839 34.615 0.00 0.00 38.28 3.41
4072 6012 7.364522 TGTTTATTGAGTATGAGCAAGTCAC 57.635 36.000 0.00 0.00 38.28 3.67
4073 6013 6.092670 GCTGTTTATTGAGTATGAGCAAGTCA 59.907 38.462 0.00 0.00 40.38 3.41
4074 6014 6.314896 AGCTGTTTATTGAGTATGAGCAAGTC 59.685 38.462 0.00 0.00 0.00 3.01
4075 6015 6.176183 AGCTGTTTATTGAGTATGAGCAAGT 58.824 36.000 0.00 0.00 0.00 3.16
4076 6016 6.314648 TGAGCTGTTTATTGAGTATGAGCAAG 59.685 38.462 0.00 0.00 0.00 4.01
4077 6017 6.172630 TGAGCTGTTTATTGAGTATGAGCAA 58.827 36.000 0.00 0.00 0.00 3.91
4078 6018 5.733676 TGAGCTGTTTATTGAGTATGAGCA 58.266 37.500 0.00 0.00 0.00 4.26
4079 6019 6.656945 CATGAGCTGTTTATTGAGTATGAGC 58.343 40.000 0.00 0.00 0.00 4.26
4080 6020 6.259387 TGCATGAGCTGTTTATTGAGTATGAG 59.741 38.462 0.00 0.00 42.74 2.90
4081 6021 6.114767 TGCATGAGCTGTTTATTGAGTATGA 58.885 36.000 0.00 0.00 42.74 2.15
4082 6022 6.259387 TCTGCATGAGCTGTTTATTGAGTATG 59.741 38.462 0.00 0.00 42.74 2.39
4083 6023 6.259608 GTCTGCATGAGCTGTTTATTGAGTAT 59.740 38.462 0.00 0.00 42.74 2.12
4084 6024 5.582269 GTCTGCATGAGCTGTTTATTGAGTA 59.418 40.000 0.00 0.00 42.74 2.59
4085 6025 4.394300 GTCTGCATGAGCTGTTTATTGAGT 59.606 41.667 0.00 0.00 42.74 3.41
4086 6026 4.393990 TGTCTGCATGAGCTGTTTATTGAG 59.606 41.667 0.00 0.00 42.74 3.02
4087 6027 4.325972 TGTCTGCATGAGCTGTTTATTGA 58.674 39.130 0.00 0.00 42.74 2.57
4088 6028 4.438336 CCTGTCTGCATGAGCTGTTTATTG 60.438 45.833 0.00 0.00 42.74 1.90
4089 6029 3.693085 CCTGTCTGCATGAGCTGTTTATT 59.307 43.478 0.00 0.00 42.74 1.40
4090 6030 3.276857 CCTGTCTGCATGAGCTGTTTAT 58.723 45.455 0.00 0.00 42.74 1.40
4091 6031 2.038952 ACCTGTCTGCATGAGCTGTTTA 59.961 45.455 0.00 0.00 42.74 2.01
4092 6032 1.202855 ACCTGTCTGCATGAGCTGTTT 60.203 47.619 0.00 0.00 42.74 2.83
4093 6033 0.399454 ACCTGTCTGCATGAGCTGTT 59.601 50.000 0.00 0.00 42.74 3.16
4094 6034 0.321387 CACCTGTCTGCATGAGCTGT 60.321 55.000 0.00 0.00 42.74 4.40
4095 6035 1.645704 GCACCTGTCTGCATGAGCTG 61.646 60.000 0.00 0.00 42.74 4.24
4096 6036 1.376942 GCACCTGTCTGCATGAGCT 60.377 57.895 0.00 0.00 42.74 4.09
4097 6037 2.747822 CGCACCTGTCTGCATGAGC 61.748 63.158 0.00 0.00 36.94 4.26
4098 6038 2.104859 CCGCACCTGTCTGCATGAG 61.105 63.158 0.00 0.00 36.94 2.90
4099 6039 2.046988 CCGCACCTGTCTGCATGA 60.047 61.111 0.00 0.00 36.94 3.07
4100 6040 3.807538 GCCGCACCTGTCTGCATG 61.808 66.667 0.00 0.00 36.94 4.06
4116 6056 3.758931 GAAATGGGCACACCGGGC 61.759 66.667 6.32 0.00 44.64 6.13
4117 6057 3.068064 GGAAATGGGCACACCGGG 61.068 66.667 6.32 0.00 44.64 5.73
4118 6058 1.467678 TTTGGAAATGGGCACACCGG 61.468 55.000 0.00 0.00 44.64 5.28
4119 6059 0.038343 CTTTGGAAATGGGCACACCG 60.038 55.000 0.00 0.00 44.64 4.94
4120 6060 0.321346 CCTTTGGAAATGGGCACACC 59.679 55.000 0.00 0.00 37.48 4.16
4121 6061 1.047801 ACCTTTGGAAATGGGCACAC 58.952 50.000 0.00 0.00 44.85 3.82
4122 6062 1.047002 CACCTTTGGAAATGGGCACA 58.953 50.000 0.00 0.00 44.85 4.57
4123 6063 1.047801 ACACCTTTGGAAATGGGCAC 58.952 50.000 0.00 0.00 44.85 5.01
4331 6271 1.001764 CATTCAGGCAGGCCACTCA 60.002 57.895 13.63 0.00 38.92 3.41
4340 6280 1.456296 GCAGTGATGACATTCAGGCA 58.544 50.000 0.00 0.00 41.62 4.75
4383 6323 4.513318 TCACTATTTGTCAATCAACACGCA 59.487 37.500 0.00 0.00 35.61 5.24
4565 6505 7.825331 TTGACATTACCTTACCAACAATTGA 57.175 32.000 13.59 0.00 0.00 2.57
4571 6511 8.556213 TGAAGTATTGACATTACCTTACCAAC 57.444 34.615 4.30 0.00 0.00 3.77
4911 6863 1.677300 CACACAGCGCCCCCAAATA 60.677 57.895 2.29 0.00 0.00 1.40
4912 6864 2.786512 ATCACACAGCGCCCCCAAAT 62.787 55.000 2.29 0.00 0.00 2.32
4914 6866 3.965258 ATCACACAGCGCCCCCAA 61.965 61.111 2.29 0.00 0.00 4.12
4915 6867 4.720902 CATCACACAGCGCCCCCA 62.721 66.667 2.29 0.00 0.00 4.96
4918 6870 1.376683 TTACCATCACACAGCGCCC 60.377 57.895 2.29 0.00 0.00 6.13
4919 6871 0.953471 TGTTACCATCACACAGCGCC 60.953 55.000 2.29 0.00 0.00 6.53
5574 7561 4.806640 ATGGTTTTGCATTTACTGGAGG 57.193 40.909 0.00 0.00 0.00 4.30
5576 7563 7.102346 CCAATTATGGTTTTGCATTTACTGGA 58.898 34.615 0.00 0.00 42.18 3.86
5593 7580 5.627499 ACTACACTTGTGCACCAATTATG 57.373 39.130 15.69 6.72 31.20 1.90
5608 7595 6.380079 AGGAGAAATTCATCCAACTACACT 57.620 37.500 10.60 0.00 38.12 3.55
5841 7828 3.625897 CCAGGTCCACCGCACTCA 61.626 66.667 0.00 0.00 42.08 3.41
5920 7909 4.323553 AAGTGTTAGATACATCCTCCGC 57.676 45.455 0.00 0.00 39.39 5.54
5921 7910 6.214399 GGTTAAGTGTTAGATACATCCTCCG 58.786 44.000 0.00 0.00 39.39 4.63
5989 7978 1.542030 GGTGAGAAGAAGCAGAGACGA 59.458 52.381 0.00 0.00 0.00 4.20
6107 8096 0.827368 GAGTTGGAGCTACCTCAGGG 59.173 60.000 0.00 0.00 39.96 4.45
6139 8128 4.895668 ACCGGACATCTTTTAAGTACCA 57.104 40.909 9.46 0.00 0.00 3.25
6167 8156 8.915057 ATAGACAGTGGAATATGAATTTGAGG 57.085 34.615 0.00 0.00 0.00 3.86
6182 8171 3.058016 CAGCACCAACAAATAGACAGTGG 60.058 47.826 0.00 0.00 0.00 4.00
6281 8544 3.067106 ACAATTTGGTCGAGCTACAGTG 58.933 45.455 16.64 10.96 0.00 3.66
6300 8563 6.434028 AGCACATTAAGAGGAATTTAGCAACA 59.566 34.615 0.00 0.00 0.00 3.33
6505 8771 2.759355 AGATATCCTTGGACGGAACCA 58.241 47.619 0.00 0.00 36.49 3.67
6602 8868 0.105039 AGTAGGAGCTATGTTGCCGC 59.895 55.000 0.00 0.00 0.00 6.53
6698 8964 5.041951 TGCAGACGAATGTGATTTAAACC 57.958 39.130 0.00 0.00 0.00 3.27
6702 8968 6.403527 CCATTTCTGCAGACGAATGTGATTTA 60.404 38.462 27.52 6.18 0.00 1.40
6795 9061 2.099756 GCGATAAAAAGGGCAATGAGCT 59.900 45.455 0.00 0.00 44.79 4.09
6814 9080 6.914215 ACAACAGAGCAATCATTTATAATGCG 59.086 34.615 3.08 0.00 41.72 4.73
6821 9087 5.069318 TGTGGACAACAGAGCAATCATTTA 58.931 37.500 0.00 0.00 33.78 1.40
6822 9088 3.890756 TGTGGACAACAGAGCAATCATTT 59.109 39.130 0.00 0.00 33.78 2.32
6908 9174 5.014123 GTGGATCATATAGTTGAATGGGGGA 59.986 44.000 0.00 0.00 0.00 4.81
7022 9288 2.202932 CACCCGCTTCCCATCTCG 60.203 66.667 0.00 0.00 0.00 4.04
7148 9474 8.276325 CAGATTATTAGCGACATACAAACTTCC 58.724 37.037 0.00 0.00 0.00 3.46
7182 9509 6.075762 TCTCAGCAGTACGTAAAGTTAACA 57.924 37.500 8.61 0.00 0.00 2.41
7194 9521 6.150140 AGGTTTGATCAAATTCTCAGCAGTAC 59.850 38.462 23.05 6.81 32.36 2.73
7218 9545 7.719778 ACGTTAGTAAGGTTAAAACTTCCAG 57.280 36.000 2.38 0.00 0.00 3.86
7240 9567 4.189231 CCCTTCCAGGTAACAGAATAACG 58.811 47.826 0.00 0.00 41.41 3.18
7325 9660 2.751259 CCATCAGGTCAATGAACACTGG 59.249 50.000 0.00 0.15 31.76 4.00
7487 9845 4.387256 CAGTACTGAACTTTGCAGACTAGC 59.613 45.833 18.45 0.00 35.76 3.42
7503 9861 7.819415 TGTTTCATAACCTCTGATTCAGTACTG 59.181 37.037 17.17 17.17 33.15 2.74
7564 9922 7.027161 TCAAGTGCTAAGAACTTTTGTTTCAC 58.973 34.615 0.00 0.00 43.66 3.18
7577 9935 4.592942 AGCCATCATTTCAAGTGCTAAGA 58.407 39.130 0.00 0.00 0.00 2.10
7578 9936 4.978083 AGCCATCATTTCAAGTGCTAAG 57.022 40.909 0.00 0.00 0.00 2.18
7589 9947 3.894427 TGTGGTTGTACAAGCCATCATTT 59.106 39.130 29.46 0.00 37.97 2.32
7613 9971 2.875296 AGTTTGCATAACAGAGGCCAA 58.125 42.857 5.01 0.00 32.41 4.52
7622 9980 4.189231 ACGGGTCATCTAGTTTGCATAAC 58.811 43.478 0.00 0.00 0.00 1.89
7626 9984 2.422597 CAACGGGTCATCTAGTTTGCA 58.577 47.619 0.00 0.00 0.00 4.08
7627 9985 1.130561 GCAACGGGTCATCTAGTTTGC 59.869 52.381 0.00 0.00 0.00 3.68
7690 10048 9.486497 TTCAAACAACAATATGTTAATGCACAT 57.514 25.926 0.00 0.00 42.49 3.21
7713 10071 9.159364 GCTGCATATAGTATCATGATCTTTTCA 57.841 33.333 12.53 1.21 39.12 2.69
7740 10103 3.487574 GTGTGTATGACTATCGCTTGCTC 59.512 47.826 0.00 0.00 0.00 4.26
7915 10282 5.358442 TGTGTGGTATGCTTTTGTAACAACT 59.642 36.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.