Multiple sequence alignment - TraesCS6D01G278100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G278100 chr6D 100.000 4215 0 0 1 4215 386444962 386440748 0.000000e+00 7784
1 TraesCS6D01G278100 chr6D 89.899 99 8 1 396 494 12058491 12058587 4.420000e-25 126
2 TraesCS6D01G278100 chr6B 94.781 2012 86 11 848 2858 577367841 577365848 0.000000e+00 3116
3 TraesCS6D01G278100 chr6B 94.961 635 31 1 2856 3489 577365813 577365179 0.000000e+00 994
4 TraesCS6D01G278100 chr6B 82.941 510 27 14 3531 3993 577365167 577364671 5.070000e-109 405
5 TraesCS6D01G278100 chr6B 90.367 218 9 4 3991 4208 577364618 577364413 4.150000e-70 276
6 TraesCS6D01G278100 chr6B 92.045 176 10 3 661 835 577367985 577367813 1.170000e-60 244
7 TraesCS6D01G278100 chr6B 92.632 95 6 1 139 233 577369866 577369773 7.350000e-28 135
8 TraesCS6D01G278100 chr6B 96.825 63 2 0 3316 3378 577365321 577365259 5.760000e-19 106
9 TraesCS6D01G278100 chr6B 94.118 68 4 0 1 68 288635658 288635725 2.070000e-18 104
10 TraesCS6D01G278100 chr6A 92.057 1473 90 12 2032 3489 531524729 531523269 0.000000e+00 2047
11 TraesCS6D01G278100 chr6A 94.965 854 29 3 1063 1915 531525785 531524945 0.000000e+00 1327
12 TraesCS6D01G278100 chr6A 91.557 687 42 10 3531 4212 531523257 531522582 0.000000e+00 933
13 TraesCS6D01G278100 chr6A 92.883 281 14 6 734 1012 531526336 531526060 1.830000e-108 403
14 TraesCS6D01G278100 chr6A 90.654 107 6 4 393 499 16440207 16440105 5.680000e-29 139
15 TraesCS6D01G278100 chr6A 96.774 62 2 0 1 62 301533743 301533804 2.070000e-18 104
16 TraesCS6D01G278100 chr6A 92.857 70 5 0 1 70 304729347 304729416 7.460000e-18 102
17 TraesCS6D01G278100 chr6A 94.030 67 4 0 3316 3382 531523410 531523344 7.460000e-18 102
18 TraesCS6D01G278100 chr2D 91.971 137 9 2 522 657 130782651 130782786 1.550000e-44 191
19 TraesCS6D01G278100 chr5A 89.933 149 12 3 513 659 444905380 444905233 5.560000e-44 189
20 TraesCS6D01G278100 chr5A 96.774 62 2 0 1 62 224891928 224891867 2.070000e-18 104
21 TraesCS6D01G278100 chr1A 92.248 129 10 0 522 650 176444294 176444422 2.590000e-42 183
22 TraesCS6D01G278100 chr1A 91.667 132 9 2 522 652 127830332 127830202 9.310000e-42 182
23 TraesCS6D01G278100 chr1A 94.286 70 4 0 1 70 231629656 231629725 1.600000e-19 108
24 TraesCS6D01G278100 chr4D 90.141 142 10 4 522 662 500676963 500676825 9.310000e-42 182
25 TraesCS6D01G278100 chr4D 89.899 99 8 1 396 494 226384948 226385044 4.420000e-25 126
26 TraesCS6D01G278100 chr4B 90.511 137 11 2 522 657 582223508 582223643 3.350000e-41 180
27 TraesCS6D01G278100 chr4A 90.511 137 11 2 524 659 738610099 738610234 3.350000e-41 180
28 TraesCS6D01G278100 chr3D 89.855 138 14 0 522 659 488121063 488121200 1.200000e-40 178
29 TraesCS6D01G278100 chr3D 87.919 149 17 1 513 660 32009696 32009844 1.560000e-39 174
30 TraesCS6D01G278100 chr3B 77.544 285 38 10 395 657 528506054 528506334 9.440000e-32 148
31 TraesCS6D01G278100 chr2B 88.679 106 10 2 393 498 775366323 775366220 1.230000e-25 128
32 TraesCS6D01G278100 chr1B 89.899 99 8 1 396 494 682021360 682021456 4.420000e-25 126
33 TraesCS6D01G278100 chr7B 89.796 98 7 2 397 494 717027590 717027684 5.720000e-24 122
34 TraesCS6D01G278100 chr7B 95.385 65 3 0 1 65 537059179 537059115 2.070000e-18 104
35 TraesCS6D01G278100 chr7D 89.000 100 8 2 396 494 84177836 84177739 2.060000e-23 121
36 TraesCS6D01G278100 chr3A 88.119 101 11 1 398 498 346186157 346186058 7.400000e-23 119
37 TraesCS6D01G278100 chr3A 98.305 59 1 0 1 59 256232990 256233048 2.070000e-18 104
38 TraesCS6D01G278100 chr5B 95.385 65 3 0 1 65 112554196 112554132 2.070000e-18 104
39 TraesCS6D01G278100 chr2A 96.774 62 2 0 1 62 227299044 227299105 2.070000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G278100 chr6D 386440748 386444962 4214 True 7784.000000 7784 100.000000 1 4215 1 chr6D.!!$R1 4214
1 TraesCS6D01G278100 chr6B 577364413 577369866 5453 True 753.714286 3116 92.078857 139 4208 7 chr6B.!!$R1 4069
2 TraesCS6D01G278100 chr6A 531522582 531526336 3754 True 962.400000 2047 93.098400 734 4212 5 chr6A.!!$R2 3478

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
545 2180 0.035915 GTCTCCTCCCACTGAAAGCC 60.036 60.0 0.00 0.0 37.60 4.35 F
551 2186 0.038166 TCCCACTGAAAGCCCATCAC 59.962 55.0 0.00 0.0 37.60 3.06 F
602 2237 0.108585 TGAGCACCAGGACTTGAACC 59.891 55.0 0.00 0.0 0.00 3.62 F
612 2247 0.178990 GACTTGAACCTGGTTGGGCT 60.179 55.0 18.42 0.0 41.11 5.19 F
1581 3442 0.179040 TTTCCTCCGGTTTCGCTGTT 60.179 50.0 0.00 0.0 34.56 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1539 3400 0.468400 TTGGGGGTTCTCCGTTTTGG 60.468 55.000 0.0 0.0 40.09 3.28 R
1581 3442 0.836606 TCAGCTTCCACCACTGAACA 59.163 50.000 0.0 0.0 37.49 3.18 R
1803 3664 0.880278 GAGCACCTTGTTCGAGCACA 60.880 55.000 0.0 0.0 0.00 4.57 R
1840 3701 1.002315 GGGTGTAGGTTTAAGGCGACA 59.998 52.381 0.0 0.0 0.00 4.35 R
3489 5566 1.273327 CCTCACAAAACTCCCCATTGC 59.727 52.381 0.0 0.0 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 7.744087 ACATATATGCAATATTTGTGGTCGT 57.256 32.000 12.79 0.00 45.54 4.34
39 40 8.840833 ACATATATGCAATATTTGTGGTCGTA 57.159 30.769 12.79 0.00 45.54 3.43
40 41 9.448438 ACATATATGCAATATTTGTGGTCGTAT 57.552 29.630 12.79 0.00 45.54 3.06
41 42 9.920826 CATATATGCAATATTTGTGGTCGTATC 57.079 33.333 0.00 0.00 40.66 2.24
42 43 5.689383 ATGCAATATTTGTGGTCGTATCC 57.311 39.130 0.00 0.00 0.00 2.59
43 44 4.518249 TGCAATATTTGTGGTCGTATCCA 58.482 39.130 0.00 0.00 34.85 3.41
44 45 4.944317 TGCAATATTTGTGGTCGTATCCAA 59.056 37.500 0.00 0.00 39.34 3.53
45 46 5.065859 TGCAATATTTGTGGTCGTATCCAAG 59.934 40.000 0.00 0.00 39.34 3.61
46 47 5.505654 GCAATATTTGTGGTCGTATCCAAGG 60.506 44.000 0.00 0.00 39.34 3.61
47 48 3.713826 ATTTGTGGTCGTATCCAAGGT 57.286 42.857 0.00 0.00 39.34 3.50
48 49 4.829872 ATTTGTGGTCGTATCCAAGGTA 57.170 40.909 0.00 0.00 39.34 3.08
49 50 3.880047 TTGTGGTCGTATCCAAGGTAG 57.120 47.619 0.00 0.00 39.34 3.18
50 51 2.811410 TGTGGTCGTATCCAAGGTAGT 58.189 47.619 0.00 0.00 39.34 2.73
51 52 2.756760 TGTGGTCGTATCCAAGGTAGTC 59.243 50.000 0.00 0.00 39.34 2.59
52 53 2.756760 GTGGTCGTATCCAAGGTAGTCA 59.243 50.000 0.00 0.00 39.34 3.41
53 54 3.383825 GTGGTCGTATCCAAGGTAGTCAT 59.616 47.826 0.00 0.00 39.34 3.06
54 55 3.383505 TGGTCGTATCCAAGGTAGTCATG 59.616 47.826 0.00 0.00 34.24 3.07
55 56 3.383825 GGTCGTATCCAAGGTAGTCATGT 59.616 47.826 0.00 0.00 0.00 3.21
56 57 4.499357 GGTCGTATCCAAGGTAGTCATGTC 60.499 50.000 0.00 0.00 0.00 3.06
57 58 3.635373 TCGTATCCAAGGTAGTCATGTCC 59.365 47.826 0.00 0.00 0.00 4.02
58 59 3.637229 CGTATCCAAGGTAGTCATGTCCT 59.363 47.826 0.00 0.00 0.00 3.85
59 60 4.099573 CGTATCCAAGGTAGTCATGTCCTT 59.900 45.833 0.00 0.87 41.53 3.36
60 61 5.301045 CGTATCCAAGGTAGTCATGTCCTTA 59.699 44.000 11.47 2.39 39.22 2.69
61 62 6.015350 CGTATCCAAGGTAGTCATGTCCTTAT 60.015 42.308 11.47 7.51 39.22 1.73
62 63 6.831664 ATCCAAGGTAGTCATGTCCTTATT 57.168 37.500 11.47 1.95 39.22 1.40
63 64 7.931015 ATCCAAGGTAGTCATGTCCTTATTA 57.069 36.000 11.47 4.46 39.22 0.98
64 65 7.361457 TCCAAGGTAGTCATGTCCTTATTAG 57.639 40.000 11.47 3.61 39.22 1.73
65 66 7.130099 TCCAAGGTAGTCATGTCCTTATTAGA 58.870 38.462 11.47 6.48 39.22 2.10
66 67 7.622081 TCCAAGGTAGTCATGTCCTTATTAGAA 59.378 37.037 11.47 0.00 39.22 2.10
67 68 8.265055 CCAAGGTAGTCATGTCCTTATTAGAAA 58.735 37.037 11.47 0.00 39.22 2.52
68 69 9.838339 CAAGGTAGTCATGTCCTTATTAGAAAT 57.162 33.333 11.47 0.00 39.22 2.17
69 70 9.838339 AAGGTAGTCATGTCCTTATTAGAAATG 57.162 33.333 10.61 0.00 39.43 2.32
70 71 8.432805 AGGTAGTCATGTCCTTATTAGAAATGG 58.567 37.037 0.00 0.00 0.00 3.16
71 72 7.173390 GGTAGTCATGTCCTTATTAGAAATGGC 59.827 40.741 0.00 0.00 0.00 4.40
72 73 6.064717 AGTCATGTCCTTATTAGAAATGGCC 58.935 40.000 0.00 0.00 0.00 5.36
73 74 6.064717 GTCATGTCCTTATTAGAAATGGCCT 58.935 40.000 3.32 0.00 0.00 5.19
74 75 6.016777 GTCATGTCCTTATTAGAAATGGCCTG 60.017 42.308 3.32 0.00 0.00 4.85
75 76 5.708736 TGTCCTTATTAGAAATGGCCTGA 57.291 39.130 3.32 0.00 0.00 3.86
76 77 6.266131 TGTCCTTATTAGAAATGGCCTGAT 57.734 37.500 3.32 0.00 0.00 2.90
77 78 6.672593 TGTCCTTATTAGAAATGGCCTGATT 58.327 36.000 3.32 0.00 0.00 2.57
78 79 7.125391 TGTCCTTATTAGAAATGGCCTGATTT 58.875 34.615 3.32 1.83 0.00 2.17
79 80 7.619302 TGTCCTTATTAGAAATGGCCTGATTTT 59.381 33.333 3.32 0.00 0.00 1.82
80 81 9.131791 GTCCTTATTAGAAATGGCCTGATTTTA 57.868 33.333 3.32 0.00 0.00 1.52
81 82 9.354673 TCCTTATTAGAAATGGCCTGATTTTAG 57.645 33.333 3.32 0.00 0.00 1.85
82 83 8.084684 CCTTATTAGAAATGGCCTGATTTTAGC 58.915 37.037 3.32 0.00 0.00 3.09
83 84 8.532186 TTATTAGAAATGGCCTGATTTTAGCA 57.468 30.769 3.32 0.00 0.00 3.49
84 85 4.996788 AGAAATGGCCTGATTTTAGCAG 57.003 40.909 3.32 0.00 0.00 4.24
85 86 3.131755 AGAAATGGCCTGATTTTAGCAGC 59.868 43.478 3.32 0.00 32.06 5.25
86 87 2.148446 ATGGCCTGATTTTAGCAGCA 57.852 45.000 3.32 0.00 32.06 4.41
87 88 1.921982 TGGCCTGATTTTAGCAGCAA 58.078 45.000 3.32 0.00 32.06 3.91
88 89 2.246469 TGGCCTGATTTTAGCAGCAAA 58.754 42.857 3.32 0.00 32.06 3.68
89 90 2.833338 TGGCCTGATTTTAGCAGCAAAT 59.167 40.909 3.32 0.00 32.06 2.32
90 91 3.192466 GGCCTGATTTTAGCAGCAAATG 58.808 45.455 0.00 0.00 32.06 2.32
91 92 3.368739 GGCCTGATTTTAGCAGCAAATGT 60.369 43.478 0.00 0.00 32.06 2.71
92 93 4.248058 GCCTGATTTTAGCAGCAAATGTT 58.752 39.130 0.00 0.00 32.06 2.71
93 94 4.092383 GCCTGATTTTAGCAGCAAATGTTG 59.908 41.667 0.00 0.00 32.06 3.33
94 95 4.628333 CCTGATTTTAGCAGCAAATGTTGG 59.372 41.667 0.00 0.00 32.06 3.77
95 96 5.212532 TGATTTTAGCAGCAAATGTTGGT 57.787 34.783 7.13 7.13 43.12 3.67
96 97 5.609423 TGATTTTAGCAGCAAATGTTGGTT 58.391 33.333 7.25 0.00 39.79 3.67
97 98 5.466058 TGATTTTAGCAGCAAATGTTGGTTG 59.534 36.000 7.25 0.00 39.79 3.77
98 99 4.399004 TTTAGCAGCAAATGTTGGTTGT 57.601 36.364 7.25 0.00 39.79 3.32
99 100 2.985957 AGCAGCAAATGTTGGTTGTT 57.014 40.000 0.00 0.00 39.79 2.83
100 101 2.553086 AGCAGCAAATGTTGGTTGTTG 58.447 42.857 0.00 0.00 39.79 3.33
101 102 2.168106 AGCAGCAAATGTTGGTTGTTGA 59.832 40.909 5.35 0.00 38.92 3.18
102 103 2.540931 GCAGCAAATGTTGGTTGTTGAG 59.459 45.455 5.35 0.00 38.92 3.02
103 104 3.784338 CAGCAAATGTTGGTTGTTGAGT 58.216 40.909 0.00 0.00 38.92 3.41
104 105 3.798337 CAGCAAATGTTGGTTGTTGAGTC 59.202 43.478 0.00 0.00 38.92 3.36
105 106 3.701040 AGCAAATGTTGGTTGTTGAGTCT 59.299 39.130 0.00 0.00 38.40 3.24
106 107 3.798337 GCAAATGTTGGTTGTTGAGTCTG 59.202 43.478 0.00 0.00 0.00 3.51
107 108 4.439974 GCAAATGTTGGTTGTTGAGTCTGA 60.440 41.667 0.00 0.00 0.00 3.27
108 109 5.737063 GCAAATGTTGGTTGTTGAGTCTGAT 60.737 40.000 0.00 0.00 0.00 2.90
109 110 6.514870 GCAAATGTTGGTTGTTGAGTCTGATA 60.515 38.462 0.00 0.00 0.00 2.15
110 111 6.808008 AATGTTGGTTGTTGAGTCTGATAG 57.192 37.500 0.00 0.00 0.00 2.08
111 112 5.290493 TGTTGGTTGTTGAGTCTGATAGT 57.710 39.130 0.00 0.00 0.00 2.12
112 113 5.680619 TGTTGGTTGTTGAGTCTGATAGTT 58.319 37.500 0.00 0.00 0.00 2.24
113 114 5.758296 TGTTGGTTGTTGAGTCTGATAGTTC 59.242 40.000 0.00 0.00 0.00 3.01
114 115 5.808366 TGGTTGTTGAGTCTGATAGTTCT 57.192 39.130 0.00 0.00 0.00 3.01
115 116 6.174720 TGGTTGTTGAGTCTGATAGTTCTT 57.825 37.500 0.00 0.00 0.00 2.52
116 117 6.591935 TGGTTGTTGAGTCTGATAGTTCTTT 58.408 36.000 0.00 0.00 0.00 2.52
117 118 7.054124 TGGTTGTTGAGTCTGATAGTTCTTTT 58.946 34.615 0.00 0.00 0.00 2.27
118 119 7.012327 TGGTTGTTGAGTCTGATAGTTCTTTTG 59.988 37.037 0.00 0.00 0.00 2.44
119 120 6.545504 TGTTGAGTCTGATAGTTCTTTTGC 57.454 37.500 0.00 0.00 0.00 3.68
120 121 5.177511 TGTTGAGTCTGATAGTTCTTTTGCG 59.822 40.000 0.00 0.00 0.00 4.85
121 122 4.245660 TGAGTCTGATAGTTCTTTTGCGG 58.754 43.478 0.00 0.00 0.00 5.69
122 123 3.600388 AGTCTGATAGTTCTTTTGCGGG 58.400 45.455 0.00 0.00 0.00 6.13
123 124 2.678336 GTCTGATAGTTCTTTTGCGGGG 59.322 50.000 0.00 0.00 0.00 5.73
124 125 2.017049 CTGATAGTTCTTTTGCGGGGG 58.983 52.381 0.00 0.00 0.00 5.40
125 126 1.631388 TGATAGTTCTTTTGCGGGGGA 59.369 47.619 0.00 0.00 0.00 4.81
126 127 2.241176 TGATAGTTCTTTTGCGGGGGAT 59.759 45.455 0.00 0.00 0.00 3.85
127 128 3.456644 TGATAGTTCTTTTGCGGGGGATA 59.543 43.478 0.00 0.00 0.00 2.59
128 129 2.124277 AGTTCTTTTGCGGGGGATAC 57.876 50.000 0.00 0.00 0.00 2.24
129 130 1.353022 AGTTCTTTTGCGGGGGATACA 59.647 47.619 0.00 0.00 39.74 2.29
130 131 1.471287 GTTCTTTTGCGGGGGATACAC 59.529 52.381 0.00 0.00 42.03 2.90
174 175 9.713740 CAAACAACTTGCATAAATTTTTGCTAA 57.286 25.926 26.74 19.41 39.60 3.09
220 221 6.088883 GCAGAGAAGCTAATAAATACTCGCTC 59.911 42.308 0.00 0.00 0.00 5.03
222 223 7.865385 CAGAGAAGCTAATAAATACTCGCTCTT 59.135 37.037 0.00 0.00 0.00 2.85
243 244 9.785982 GCTCTTATATTTTCTTATGGAAGGAGT 57.214 33.333 0.00 0.00 35.16 3.85
258 1892 6.544650 TGGAAGGAGTAGCTAATAGTCTAGG 58.455 44.000 0.00 0.00 34.66 3.02
260 1894 7.294245 TGGAAGGAGTAGCTAATAGTCTAGGTA 59.706 40.741 0.00 0.00 34.66 3.08
302 1936 6.331369 GAACCTCAATGTTCTGGAATTTCA 57.669 37.500 0.00 0.00 41.12 2.69
320 1955 8.797438 GGAATTTCACTTCCTGACTTTATTCTT 58.203 33.333 0.00 0.00 41.32 2.52
336 1971 9.893305 ACTTTATTCTTCTCAAATTGTAAACGG 57.107 29.630 0.00 0.00 0.00 4.44
342 1977 6.938030 TCTTCTCAAATTGTAAACGGTATGGT 59.062 34.615 0.00 0.00 0.00 3.55
343 1978 7.446013 TCTTCTCAAATTGTAAACGGTATGGTT 59.554 33.333 0.00 0.00 0.00 3.67
344 1979 6.904498 TCTCAAATTGTAAACGGTATGGTTG 58.096 36.000 0.00 0.00 0.00 3.77
350 1985 8.973835 AATTGTAAACGGTATGGTTGTTATTG 57.026 30.769 0.00 0.00 0.00 1.90
351 1986 7.741027 TTGTAAACGGTATGGTTGTTATTGA 57.259 32.000 0.00 0.00 0.00 2.57
355 1990 4.266714 ACGGTATGGTTGTTATTGAAGGG 58.733 43.478 0.00 0.00 0.00 3.95
374 2009 8.173542 TGAAGGGATAAAGTTTTAAGGTTGTC 57.826 34.615 0.00 0.00 0.00 3.18
378 2013 8.983789 AGGGATAAAGTTTTAAGGTTGTCAAAA 58.016 29.630 0.00 0.00 0.00 2.44
386 2021 9.457436 AGTTTTAAGGTTGTCAAAAAGTCTAGA 57.543 29.630 0.00 0.00 0.00 2.43
419 2054 3.666883 TTTTGAACAGCAGTACACACG 57.333 42.857 0.00 0.00 0.00 4.49
420 2055 0.934496 TTGAACAGCAGTACACACGC 59.066 50.000 0.00 0.00 0.00 5.34
421 2056 0.179097 TGAACAGCAGTACACACGCA 60.179 50.000 0.00 0.00 0.00 5.24
422 2057 0.934496 GAACAGCAGTACACACGCAA 59.066 50.000 0.00 0.00 0.00 4.85
424 2059 1.205064 CAGCAGTACACACGCAAGC 59.795 57.895 0.00 0.00 45.62 4.01
425 2060 2.170985 GCAGTACACACGCAAGCG 59.829 61.111 13.50 13.50 46.03 4.68
426 2061 2.170985 CAGTACACACGCAAGCGC 59.829 61.111 15.09 0.00 44.19 5.92
427 2062 2.029073 AGTACACACGCAAGCGCT 59.971 55.556 15.09 2.64 44.19 5.92
428 2063 2.022129 AGTACACACGCAAGCGCTC 61.022 57.895 12.06 0.00 44.19 5.03
429 2064 2.028337 TACACACGCAAGCGCTCA 59.972 55.556 12.06 0.00 44.19 4.26
430 2065 1.374125 TACACACGCAAGCGCTCAT 60.374 52.632 12.06 0.00 44.19 2.90
431 2066 0.109039 TACACACGCAAGCGCTCATA 60.109 50.000 12.06 0.00 44.19 2.15
432 2067 1.059369 CACACGCAAGCGCTCATAC 59.941 57.895 12.06 0.00 44.19 2.39
433 2068 1.374125 ACACGCAAGCGCTCATACA 60.374 52.632 12.06 0.00 44.19 2.29
434 2069 0.740868 ACACGCAAGCGCTCATACAT 60.741 50.000 12.06 0.00 44.19 2.29
435 2070 1.208259 CACGCAAGCGCTCATACATA 58.792 50.000 12.06 0.00 44.19 2.29
436 2071 1.071239 CACGCAAGCGCTCATACATAC 60.071 52.381 12.06 0.00 44.19 2.39
437 2072 1.208259 CGCAAGCGCTCATACATACA 58.792 50.000 12.06 0.00 35.30 2.29
438 2073 1.071239 CGCAAGCGCTCATACATACAC 60.071 52.381 12.06 0.00 35.30 2.90
439 2074 1.071239 GCAAGCGCTCATACATACACG 60.071 52.381 12.06 0.00 34.30 4.49
440 2075 1.071239 CAAGCGCTCATACATACACGC 60.071 52.381 12.06 0.00 46.20 5.34
441 2076 2.588731 GCGCTCATACATACACGCA 58.411 52.632 0.00 0.00 45.25 5.24
442 2077 1.139989 GCGCTCATACATACACGCAT 58.860 50.000 0.00 0.00 45.25 4.73
443 2078 2.324860 GCGCTCATACATACACGCATA 58.675 47.619 0.00 0.00 45.25 3.14
444 2079 2.090658 GCGCTCATACATACACGCATAC 59.909 50.000 0.00 0.00 45.25 2.39
445 2080 3.305110 CGCTCATACATACACGCATACA 58.695 45.455 0.00 0.00 0.00 2.29
446 2081 3.119628 CGCTCATACATACACGCATACAC 59.880 47.826 0.00 0.00 0.00 2.90
447 2082 4.299155 GCTCATACATACACGCATACACT 58.701 43.478 0.00 0.00 0.00 3.55
448 2083 4.383052 GCTCATACATACACGCATACACTC 59.617 45.833 0.00 0.00 0.00 3.51
449 2084 5.508200 TCATACATACACGCATACACTCA 57.492 39.130 0.00 0.00 0.00 3.41
450 2085 6.084326 TCATACATACACGCATACACTCAT 57.916 37.500 0.00 0.00 0.00 2.90
451 2086 6.149633 TCATACATACACGCATACACTCATC 58.850 40.000 0.00 0.00 0.00 2.92
452 2087 3.717707 ACATACACGCATACACTCATCC 58.282 45.455 0.00 0.00 0.00 3.51
453 2088 2.882927 TACACGCATACACTCATCCC 57.117 50.000 0.00 0.00 0.00 3.85
454 2089 1.195115 ACACGCATACACTCATCCCT 58.805 50.000 0.00 0.00 0.00 4.20
455 2090 2.384828 ACACGCATACACTCATCCCTA 58.615 47.619 0.00 0.00 0.00 3.53
456 2091 2.965831 ACACGCATACACTCATCCCTAT 59.034 45.455 0.00 0.00 0.00 2.57
457 2092 3.243873 ACACGCATACACTCATCCCTATG 60.244 47.826 0.00 0.00 0.00 2.23
458 2093 3.005791 CACGCATACACTCATCCCTATGA 59.994 47.826 0.00 0.00 39.87 2.15
459 2094 3.641436 ACGCATACACTCATCCCTATGAA 59.359 43.478 0.00 0.00 41.57 2.57
460 2095 4.284490 ACGCATACACTCATCCCTATGAAT 59.716 41.667 0.00 0.00 41.57 2.57
461 2096 4.628766 CGCATACACTCATCCCTATGAATG 59.371 45.833 0.00 0.00 43.41 2.67
462 2097 4.394300 GCATACACTCATCCCTATGAATGC 59.606 45.833 6.88 6.88 41.91 3.56
463 2098 3.117491 ACACTCATCCCTATGAATGCG 57.883 47.619 0.00 0.00 41.91 4.73
464 2099 1.802960 CACTCATCCCTATGAATGCGC 59.197 52.381 0.00 0.00 41.57 6.09
465 2100 1.073964 CTCATCCCTATGAATGCGCG 58.926 55.000 0.00 0.00 41.57 6.86
466 2101 0.950555 TCATCCCTATGAATGCGCGC 60.951 55.000 27.26 27.26 39.20 6.86
467 2102 2.029288 ATCCCTATGAATGCGCGCG 61.029 57.895 28.44 28.44 0.00 6.86
468 2103 4.374702 CCCTATGAATGCGCGCGC 62.375 66.667 45.02 45.02 42.35 6.86
481 2116 2.434185 CGCGCACACACACCCTAT 60.434 61.111 8.75 0.00 0.00 2.57
482 2117 2.032634 CGCGCACACACACCCTATT 61.033 57.895 8.75 0.00 0.00 1.73
483 2118 1.794222 GCGCACACACACCCTATTC 59.206 57.895 0.30 0.00 0.00 1.75
484 2119 1.644786 GCGCACACACACCCTATTCC 61.645 60.000 0.30 0.00 0.00 3.01
485 2120 0.036388 CGCACACACACCCTATTCCT 60.036 55.000 0.00 0.00 0.00 3.36
486 2121 1.206132 CGCACACACACCCTATTCCTA 59.794 52.381 0.00 0.00 0.00 2.94
487 2122 2.158957 CGCACACACACCCTATTCCTAT 60.159 50.000 0.00 0.00 0.00 2.57
488 2123 3.206150 GCACACACACCCTATTCCTATG 58.794 50.000 0.00 0.00 0.00 2.23
489 2124 3.118408 GCACACACACCCTATTCCTATGA 60.118 47.826 0.00 0.00 0.00 2.15
490 2125 4.697514 CACACACACCCTATTCCTATGAG 58.302 47.826 0.00 0.00 0.00 2.90
491 2126 3.134804 ACACACACCCTATTCCTATGAGC 59.865 47.826 0.00 0.00 0.00 4.26
492 2127 3.134623 CACACACCCTATTCCTATGAGCA 59.865 47.826 0.00 0.00 0.00 4.26
493 2128 3.134804 ACACACCCTATTCCTATGAGCAC 59.865 47.826 0.00 0.00 0.00 4.40
494 2129 3.389329 CACACCCTATTCCTATGAGCACT 59.611 47.826 0.00 0.00 0.00 4.40
495 2130 4.040755 ACACCCTATTCCTATGAGCACTT 58.959 43.478 0.00 0.00 0.00 3.16
496 2131 4.475016 ACACCCTATTCCTATGAGCACTTT 59.525 41.667 0.00 0.00 0.00 2.66
497 2132 5.059833 CACCCTATTCCTATGAGCACTTTC 58.940 45.833 0.00 0.00 0.00 2.62
498 2133 4.971924 ACCCTATTCCTATGAGCACTTTCT 59.028 41.667 0.00 0.00 0.00 2.52
499 2134 5.430089 ACCCTATTCCTATGAGCACTTTCTT 59.570 40.000 0.00 0.00 0.00 2.52
500 2135 6.615726 ACCCTATTCCTATGAGCACTTTCTTA 59.384 38.462 0.00 0.00 0.00 2.10
501 2136 7.127339 ACCCTATTCCTATGAGCACTTTCTTAA 59.873 37.037 0.00 0.00 0.00 1.85
502 2137 7.993183 CCCTATTCCTATGAGCACTTTCTTAAA 59.007 37.037 0.00 0.00 0.00 1.52
503 2138 9.396022 CCTATTCCTATGAGCACTTTCTTAAAA 57.604 33.333 0.00 0.00 0.00 1.52
509 2144 9.490663 CCTATGAGCACTTTCTTAAAATTTACG 57.509 33.333 0.00 0.00 0.00 3.18
512 2147 9.612620 ATGAGCACTTTCTTAAAATTTACGAAG 57.387 29.630 5.13 0.00 0.00 3.79
514 2149 9.104126 GAGCACTTTCTTAAAATTTACGAAGTC 57.896 33.333 5.13 2.80 43.93 3.01
515 2150 7.797123 AGCACTTTCTTAAAATTTACGAAGTCG 59.203 33.333 5.13 0.00 43.93 4.18
516 2151 7.407976 GCACTTTCTTAAAATTTACGAAGTCGC 60.408 37.037 0.00 5.70 43.93 5.19
517 2152 7.059147 CACTTTCTTAAAATTTACGAAGTCGCC 59.941 37.037 0.00 0.00 43.93 5.54
518 2153 5.194199 TCTTAAAATTTACGAAGTCGCCG 57.806 39.130 0.00 0.00 43.93 6.46
519 2154 4.685628 TCTTAAAATTTACGAAGTCGCCGT 59.314 37.500 0.00 0.00 43.93 5.68
520 2155 5.861251 TCTTAAAATTTACGAAGTCGCCGTA 59.139 36.000 0.00 0.00 43.93 4.02
521 2156 4.572950 AAAATTTACGAAGTCGCCGTAG 57.427 40.909 0.00 0.00 43.93 3.51
538 2173 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
539 2174 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
540 2175 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
541 2176 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
542 2177 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
543 2178 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
544 2179 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
545 2180 0.035915 GTCTCCTCCCACTGAAAGCC 60.036 60.000 0.00 0.00 37.60 4.35
546 2181 1.201429 TCTCCTCCCACTGAAAGCCC 61.201 60.000 0.00 0.00 37.60 5.19
547 2182 1.463214 TCCTCCCACTGAAAGCCCA 60.463 57.895 0.00 0.00 37.60 5.36
548 2183 0.846427 TCCTCCCACTGAAAGCCCAT 60.846 55.000 0.00 0.00 37.60 4.00
549 2184 0.394899 CCTCCCACTGAAAGCCCATC 60.395 60.000 0.00 0.00 37.60 3.51
550 2185 0.329261 CTCCCACTGAAAGCCCATCA 59.671 55.000 0.00 0.00 37.60 3.07
551 2186 0.038166 TCCCACTGAAAGCCCATCAC 59.962 55.000 0.00 0.00 37.60 3.06
552 2187 0.967380 CCCACTGAAAGCCCATCACC 60.967 60.000 0.00 0.00 37.60 4.02
553 2188 0.251297 CCACTGAAAGCCCATCACCA 60.251 55.000 0.00 0.00 37.60 4.17
554 2189 1.619654 CACTGAAAGCCCATCACCAA 58.380 50.000 0.00 0.00 37.60 3.67
555 2190 1.962807 CACTGAAAGCCCATCACCAAA 59.037 47.619 0.00 0.00 37.60 3.28
556 2191 2.364970 CACTGAAAGCCCATCACCAAAA 59.635 45.455 0.00 0.00 37.60 2.44
557 2192 3.037549 ACTGAAAGCCCATCACCAAAAA 58.962 40.909 0.00 0.00 37.60 1.94
558 2193 3.647590 ACTGAAAGCCCATCACCAAAAAT 59.352 39.130 0.00 0.00 37.60 1.82
559 2194 4.102996 ACTGAAAGCCCATCACCAAAAATT 59.897 37.500 0.00 0.00 37.60 1.82
560 2195 4.640364 TGAAAGCCCATCACCAAAAATTC 58.360 39.130 0.00 0.00 0.00 2.17
561 2196 4.347583 TGAAAGCCCATCACCAAAAATTCT 59.652 37.500 0.00 0.00 0.00 2.40
562 2197 3.967332 AGCCCATCACCAAAAATTCTG 57.033 42.857 0.00 0.00 0.00 3.02
563 2198 3.509442 AGCCCATCACCAAAAATTCTGA 58.491 40.909 0.00 0.00 0.00 3.27
564 2199 3.903090 AGCCCATCACCAAAAATTCTGAA 59.097 39.130 0.00 0.00 0.00 3.02
565 2200 4.347583 AGCCCATCACCAAAAATTCTGAAA 59.652 37.500 0.00 0.00 0.00 2.69
566 2201 5.013391 AGCCCATCACCAAAAATTCTGAAAT 59.987 36.000 0.00 0.00 0.00 2.17
567 2202 6.213195 AGCCCATCACCAAAAATTCTGAAATA 59.787 34.615 0.00 0.00 0.00 1.40
568 2203 6.878389 GCCCATCACCAAAAATTCTGAAATAA 59.122 34.615 0.00 0.00 0.00 1.40
569 2204 7.390162 GCCCATCACCAAAAATTCTGAAATAAA 59.610 33.333 0.00 0.00 0.00 1.40
570 2205 9.452287 CCCATCACCAAAAATTCTGAAATAAAT 57.548 29.630 0.00 0.00 0.00 1.40
574 2209 9.709495 TCACCAAAAATTCTGAAATAAATCCAG 57.291 29.630 0.00 0.00 0.00 3.86
575 2210 9.709495 CACCAAAAATTCTGAAATAAATCCAGA 57.291 29.630 0.00 0.00 35.38 3.86
589 2224 9.807649 AAATAAATCCAGAAATAATGTGAGCAC 57.192 29.630 0.00 0.00 0.00 4.40
590 2225 5.841957 AATCCAGAAATAATGTGAGCACC 57.158 39.130 0.00 0.00 0.00 5.01
591 2226 4.299586 TCCAGAAATAATGTGAGCACCA 57.700 40.909 0.00 0.00 0.00 4.17
592 2227 4.264253 TCCAGAAATAATGTGAGCACCAG 58.736 43.478 0.00 0.00 0.00 4.00
593 2228 3.379372 CCAGAAATAATGTGAGCACCAGG 59.621 47.826 0.00 0.00 0.00 4.45
594 2229 4.264253 CAGAAATAATGTGAGCACCAGGA 58.736 43.478 0.00 0.00 0.00 3.86
595 2230 4.095483 CAGAAATAATGTGAGCACCAGGAC 59.905 45.833 0.00 0.00 0.00 3.85
596 2231 4.018960 AGAAATAATGTGAGCACCAGGACT 60.019 41.667 0.00 0.00 0.00 3.85
597 2232 4.307032 AATAATGTGAGCACCAGGACTT 57.693 40.909 0.00 0.00 0.00 3.01
598 2233 1.901591 AATGTGAGCACCAGGACTTG 58.098 50.000 0.00 0.00 0.00 3.16
599 2234 1.059098 ATGTGAGCACCAGGACTTGA 58.941 50.000 0.00 0.00 0.00 3.02
600 2235 0.836606 TGTGAGCACCAGGACTTGAA 59.163 50.000 0.00 0.00 0.00 2.69
601 2236 1.230324 GTGAGCACCAGGACTTGAAC 58.770 55.000 0.00 0.00 0.00 3.18
602 2237 0.108585 TGAGCACCAGGACTTGAACC 59.891 55.000 0.00 0.00 0.00 3.62
603 2238 0.398318 GAGCACCAGGACTTGAACCT 59.602 55.000 0.00 0.00 38.40 3.50
610 2245 0.478507 AGGACTTGAACCTGGTTGGG 59.521 55.000 18.42 8.92 41.11 4.12
611 2246 1.179174 GGACTTGAACCTGGTTGGGC 61.179 60.000 18.42 8.81 41.11 5.36
612 2247 0.178990 GACTTGAACCTGGTTGGGCT 60.179 55.000 18.42 0.00 41.11 5.19
613 2248 0.468029 ACTTGAACCTGGTTGGGCTG 60.468 55.000 18.42 5.11 41.11 4.85
614 2249 1.152567 TTGAACCTGGTTGGGCTGG 60.153 57.895 18.42 0.00 41.11 4.85
615 2250 2.283173 GAACCTGGTTGGGCTGGG 60.283 66.667 18.42 0.00 41.11 4.45
616 2251 3.886550 GAACCTGGTTGGGCTGGGG 62.887 68.421 18.42 0.00 41.11 4.96
617 2252 4.938756 ACCTGGTTGGGCTGGGGA 62.939 66.667 0.00 0.00 41.11 4.81
618 2253 3.350163 CCTGGTTGGGCTGGGGAT 61.350 66.667 0.00 0.00 0.00 3.85
619 2254 2.006415 CCTGGTTGGGCTGGGGATA 61.006 63.158 0.00 0.00 0.00 2.59
620 2255 1.227383 CTGGTTGGGCTGGGGATAC 59.773 63.158 0.00 0.00 0.00 2.24
636 2271 4.353383 GGATACCATTGTCCCTCTAACC 57.647 50.000 0.00 0.00 0.00 2.85
637 2272 3.714798 GGATACCATTGTCCCTCTAACCA 59.285 47.826 0.00 0.00 0.00 3.67
638 2273 4.351111 GGATACCATTGTCCCTCTAACCAT 59.649 45.833 0.00 0.00 0.00 3.55
639 2274 3.933861 ACCATTGTCCCTCTAACCATC 57.066 47.619 0.00 0.00 0.00 3.51
640 2275 2.509964 ACCATTGTCCCTCTAACCATCC 59.490 50.000 0.00 0.00 0.00 3.51
641 2276 2.509548 CCATTGTCCCTCTAACCATCCA 59.490 50.000 0.00 0.00 0.00 3.41
642 2277 3.053693 CCATTGTCCCTCTAACCATCCAA 60.054 47.826 0.00 0.00 0.00 3.53
643 2278 3.713826 TTGTCCCTCTAACCATCCAAC 57.286 47.619 0.00 0.00 0.00 3.77
644 2279 1.913419 TGTCCCTCTAACCATCCAACC 59.087 52.381 0.00 0.00 0.00 3.77
645 2280 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
646 2281 2.307686 GTCCCTCTAACCATCCAACCAA 59.692 50.000 0.00 0.00 0.00 3.67
647 2282 2.990284 TCCCTCTAACCATCCAACCAAA 59.010 45.455 0.00 0.00 0.00 3.28
648 2283 3.010138 TCCCTCTAACCATCCAACCAAAG 59.990 47.826 0.00 0.00 0.00 2.77
649 2284 3.356290 CCTCTAACCATCCAACCAAAGG 58.644 50.000 0.00 0.00 0.00 3.11
650 2285 3.245264 CCTCTAACCATCCAACCAAAGGT 60.245 47.826 0.00 0.00 37.65 3.50
652 2287 5.515886 CCTCTAACCATCCAACCAAAGGTTA 60.516 44.000 0.40 0.00 45.01 2.85
654 2289 3.895704 ACCATCCAACCAAAGGTTAGT 57.104 42.857 0.40 0.00 45.01 2.24
655 2290 4.193240 ACCATCCAACCAAAGGTTAGTT 57.807 40.909 0.40 0.00 45.01 2.24
656 2291 4.149598 ACCATCCAACCAAAGGTTAGTTC 58.850 43.478 0.40 0.00 45.01 3.01
657 2292 3.190535 CCATCCAACCAAAGGTTAGTTCG 59.809 47.826 0.40 0.00 45.01 3.95
658 2293 2.223745 TCCAACCAAAGGTTAGTTCGC 58.776 47.619 0.40 0.00 45.01 4.70
659 2294 2.158726 TCCAACCAAAGGTTAGTTCGCT 60.159 45.455 0.40 0.00 45.01 4.93
695 2330 5.178252 ACTTGAGTGAACAGATTTCATCACG 59.822 40.000 0.00 0.00 45.21 4.35
701 2336 6.596888 AGTGAACAGATTTCATCACGATGATT 59.403 34.615 10.41 1.35 46.12 2.57
702 2337 7.120285 AGTGAACAGATTTCATCACGATGATTT 59.880 33.333 10.41 1.85 46.12 2.17
710 2345 9.132521 GATTTCATCACGATGATTTCTGTTTTT 57.867 29.630 10.41 0.00 46.12 1.94
811 2446 2.132762 GAAGAAAACGCGTGGAAGAGA 58.867 47.619 14.98 0.00 0.00 3.10
825 2460 4.574013 GTGGAAGAGATGATGTGTGATTCC 59.426 45.833 0.00 0.00 36.37 3.01
849 2484 8.367156 TCCAGACAATCCAAAAGGAAATAAAAG 58.633 33.333 0.00 0.00 0.00 2.27
957 2592 0.944311 CAACAGTCGTTCGTCAGGGG 60.944 60.000 0.00 0.00 31.13 4.79
997 2633 2.305607 CCCAACTCCCGATTCCCCA 61.306 63.158 0.00 0.00 0.00 4.96
1539 3400 2.360844 GAAGAGAGGGCAAGGTAAAGC 58.639 52.381 0.00 0.00 0.00 3.51
1560 3421 1.757699 CAAAACGGAGAACCCCCAAAA 59.242 47.619 0.00 0.00 0.00 2.44
1581 3442 0.179040 TTTCCTCCGGTTTCGCTGTT 60.179 50.000 0.00 0.00 34.56 3.16
1585 3446 0.234884 CTCCGGTTTCGCTGTTGTTC 59.765 55.000 0.00 0.00 34.56 3.18
1622 3483 2.374170 ACTAGGGTTAGTGGGTTTGTGG 59.626 50.000 0.00 0.00 38.69 4.17
1703 3564 4.741342 CTGACTGCCTTTTGATGATTTCC 58.259 43.478 0.00 0.00 0.00 3.13
1722 3583 2.897326 TCCTTACTTGTGCAGCTCTACA 59.103 45.455 0.00 0.00 0.00 2.74
1840 3701 2.092914 GCTCCAAGGCTGTATTGGTACT 60.093 50.000 11.20 0.00 46.11 2.73
1871 3732 0.036388 CCTACACCCATCACGCACTT 60.036 55.000 0.00 0.00 0.00 3.16
1915 3777 7.375053 TGAATGCTTAATTTCTTGTGGTAACC 58.625 34.615 0.00 0.00 0.00 2.85
1917 3779 6.325919 TGCTTAATTTCTTGTGGTAACCAG 57.674 37.500 0.00 0.00 32.34 4.00
1918 3780 6.065374 TGCTTAATTTCTTGTGGTAACCAGA 58.935 36.000 0.00 0.00 32.34 3.86
1960 3985 2.460918 CGAAACCACTAGCGACATAGG 58.539 52.381 0.00 0.00 0.00 2.57
1974 3999 5.538813 AGCGACATAGGTTTATCATACTCCA 59.461 40.000 0.00 0.00 0.00 3.86
1996 4021 7.338710 TCCAGATATAACAAGGAGTCAAAAGG 58.661 38.462 0.00 0.00 0.00 3.11
2100 4125 5.147162 CGGCAGAACAATAACTCTTTTGTC 58.853 41.667 0.00 0.00 35.09 3.18
2306 4334 7.443575 GCTGTATCATTCAATCTTCACTACCAT 59.556 37.037 0.00 0.00 0.00 3.55
2331 4359 6.614694 TGGTGAGTGCTAACTTCCTATTAA 57.385 37.500 0.00 0.00 36.52 1.40
2472 4500 2.281414 TGCTGCTTGCCTTGCGTA 60.281 55.556 0.00 0.00 42.00 4.42
2490 4518 3.303132 GCGTAGTTGCAATACTGTATGCC 60.303 47.826 0.59 5.74 41.87 4.40
2513 4541 2.830923 TGGTTGGCCAGGTAATCAATTG 59.169 45.455 5.11 0.00 40.46 2.32
2535 4563 2.325583 TCTGCGTTTGAGGAAGTGTT 57.674 45.000 0.00 0.00 0.00 3.32
2581 4609 9.342308 CTATTATTACTTTGCTCATTCCCTTCA 57.658 33.333 0.00 0.00 0.00 3.02
2772 4800 6.841601 AGGATGCTGTAAGGATTATGCTTTA 58.158 36.000 3.97 0.00 45.52 1.85
2813 4852 6.598525 AGTAAAAGTTGCTTTGTTTGTTTGC 58.401 32.000 0.00 0.00 33.64 3.68
2892 4969 7.268586 ACAGAAGTGAGCATATAGTTTAGTGG 58.731 38.462 0.00 0.00 0.00 4.00
2909 4986 3.759581 AGTGGTCCGTTACACTAGAGAA 58.240 45.455 0.00 0.00 45.45 2.87
2913 4990 4.341806 TGGTCCGTTACACTAGAGAAAACA 59.658 41.667 0.00 0.00 0.00 2.83
2995 5072 6.092259 GCTGTGAACTACCTATACAAACAAGG 59.908 42.308 0.00 0.00 36.42 3.61
3076 5153 2.735663 GGAATGCTGCATATGTCTCTCG 59.264 50.000 16.58 0.00 0.00 4.04
3172 5249 2.778551 TACGCATGCACGCAAACTGC 62.779 55.000 19.57 0.09 40.69 4.40
3175 5252 4.041917 ATGCACGCAAACTGCCCG 62.042 61.111 0.00 0.00 41.12 6.13
3215 5292 3.879295 TCTCAAAGGCAGTGAAAACTGAG 59.121 43.478 9.97 0.00 39.99 3.35
3223 5300 3.873952 GCAGTGAAAACTGAGAACTCACT 59.126 43.478 9.97 8.51 45.81 3.41
3313 5390 2.641815 AGTGAGAAGCCTTGTGATTCCT 59.358 45.455 0.00 0.00 0.00 3.36
3338 5415 8.185003 TGTCTGTTTGTAAACTGATGATATCG 57.815 34.615 16.50 0.00 44.75 2.92
3345 5422 9.468532 TTTGTAAACTGATGATATCGATGAGAG 57.531 33.333 8.54 0.00 0.00 3.20
3361 5438 5.119279 CGATGAGAGTCTGTTTGTAAACTGG 59.881 44.000 0.00 5.17 39.59 4.00
3395 5472 4.451900 AGAGTCTGTTTGTAAACTGGTGG 58.548 43.478 12.43 0.00 39.59 4.61
3401 5478 6.261381 GTCTGTTTGTAAACTGGTGGTATCAA 59.739 38.462 12.43 0.00 39.59 2.57
3458 5535 0.721718 GGATGTGAGCGTGTACAAGC 59.278 55.000 23.97 23.97 36.04 4.01
3489 5566 9.859427 ATGAATGAACATTAACATAAAGTGTGG 57.141 29.630 0.00 0.00 41.14 4.17
3490 5567 7.812191 TGAATGAACATTAACATAAAGTGTGGC 59.188 33.333 0.00 0.00 41.14 5.01
3491 5568 6.641169 TGAACATTAACATAAAGTGTGGCA 57.359 33.333 0.00 0.00 41.14 4.92
3492 5569 7.043961 TGAACATTAACATAAAGTGTGGCAA 57.956 32.000 0.00 0.00 41.14 4.52
3493 5570 7.665690 TGAACATTAACATAAAGTGTGGCAAT 58.334 30.769 0.00 0.00 41.14 3.56
3494 5571 7.598118 TGAACATTAACATAAAGTGTGGCAATG 59.402 33.333 0.00 0.00 41.14 2.82
3495 5572 6.397272 ACATTAACATAAAGTGTGGCAATGG 58.603 36.000 0.00 0.00 41.14 3.16
3496 5573 3.959535 AACATAAAGTGTGGCAATGGG 57.040 42.857 0.00 0.00 41.14 4.00
3497 5574 2.178580 ACATAAAGTGTGGCAATGGGG 58.821 47.619 0.00 0.00 40.28 4.96
3500 5577 0.188342 AAAGTGTGGCAATGGGGAGT 59.812 50.000 0.00 0.00 0.00 3.85
3501 5578 0.188342 AAGTGTGGCAATGGGGAGTT 59.812 50.000 0.00 0.00 0.00 3.01
3502 5579 0.188342 AGTGTGGCAATGGGGAGTTT 59.812 50.000 0.00 0.00 0.00 2.66
3503 5580 1.047801 GTGTGGCAATGGGGAGTTTT 58.952 50.000 0.00 0.00 0.00 2.43
3504 5581 1.047002 TGTGGCAATGGGGAGTTTTG 58.953 50.000 0.00 0.00 0.00 2.44
3505 5582 1.047801 GTGGCAATGGGGAGTTTTGT 58.952 50.000 0.00 0.00 0.00 2.83
3506 5583 1.047002 TGGCAATGGGGAGTTTTGTG 58.953 50.000 0.00 0.00 0.00 3.33
3507 5584 1.337118 GGCAATGGGGAGTTTTGTGA 58.663 50.000 0.00 0.00 0.00 3.58
3508 5585 1.273327 GGCAATGGGGAGTTTTGTGAG 59.727 52.381 0.00 0.00 0.00 3.51
3509 5586 1.273327 GCAATGGGGAGTTTTGTGAGG 59.727 52.381 0.00 0.00 0.00 3.86
3510 5587 2.875296 CAATGGGGAGTTTTGTGAGGA 58.125 47.619 0.00 0.00 0.00 3.71
3511 5588 3.434309 CAATGGGGAGTTTTGTGAGGAT 58.566 45.455 0.00 0.00 0.00 3.24
3512 5589 3.833559 ATGGGGAGTTTTGTGAGGATT 57.166 42.857 0.00 0.00 0.00 3.01
3513 5590 2.875296 TGGGGAGTTTTGTGAGGATTG 58.125 47.619 0.00 0.00 0.00 2.67
3514 5591 2.171003 GGGGAGTTTTGTGAGGATTGG 58.829 52.381 0.00 0.00 0.00 3.16
3515 5592 2.490902 GGGGAGTTTTGTGAGGATTGGT 60.491 50.000 0.00 0.00 0.00 3.67
3516 5593 3.230976 GGGAGTTTTGTGAGGATTGGTT 58.769 45.455 0.00 0.00 0.00 3.67
3517 5594 3.005791 GGGAGTTTTGTGAGGATTGGTTG 59.994 47.826 0.00 0.00 0.00 3.77
3518 5595 3.636764 GGAGTTTTGTGAGGATTGGTTGT 59.363 43.478 0.00 0.00 0.00 3.32
3519 5596 4.499696 GGAGTTTTGTGAGGATTGGTTGTG 60.500 45.833 0.00 0.00 0.00 3.33
3520 5597 3.123050 GTTTTGTGAGGATTGGTTGTGC 58.877 45.455 0.00 0.00 0.00 4.57
3521 5598 2.363306 TTGTGAGGATTGGTTGTGCT 57.637 45.000 0.00 0.00 0.00 4.40
3522 5599 2.363306 TGTGAGGATTGGTTGTGCTT 57.637 45.000 0.00 0.00 0.00 3.91
3523 5600 2.665165 TGTGAGGATTGGTTGTGCTTT 58.335 42.857 0.00 0.00 0.00 3.51
3524 5601 2.622942 TGTGAGGATTGGTTGTGCTTTC 59.377 45.455 0.00 0.00 0.00 2.62
3525 5602 2.887152 GTGAGGATTGGTTGTGCTTTCT 59.113 45.455 0.00 0.00 0.00 2.52
3526 5603 2.886523 TGAGGATTGGTTGTGCTTTCTG 59.113 45.455 0.00 0.00 0.00 3.02
3527 5604 2.887152 GAGGATTGGTTGTGCTTTCTGT 59.113 45.455 0.00 0.00 0.00 3.41
3528 5605 4.072131 GAGGATTGGTTGTGCTTTCTGTA 58.928 43.478 0.00 0.00 0.00 2.74
3529 5606 4.666512 AGGATTGGTTGTGCTTTCTGTAT 58.333 39.130 0.00 0.00 0.00 2.29
3583 5660 5.782047 TGGACTCACTTTATGCAAAATTGG 58.218 37.500 0.00 0.00 0.00 3.16
3670 5749 1.827344 CAGCTGGGTGAGTATCTGACA 59.173 52.381 5.57 0.00 34.92 3.58
3672 5751 1.550524 GCTGGGTGAGTATCTGACACA 59.449 52.381 0.00 0.00 36.42 3.72
3683 5764 8.383619 GTGAGTATCTGACACATTTTATGACAC 58.616 37.037 0.00 0.00 34.92 3.67
3685 5766 5.801350 ATCTGACACATTTTATGACACGG 57.199 39.130 0.00 0.00 0.00 4.94
3698 5779 0.895530 GACACGGGTCTGGAGATGAA 59.104 55.000 11.49 0.00 40.99 2.57
3700 5781 1.208052 ACACGGGTCTGGAGATGAATG 59.792 52.381 0.00 0.00 0.00 2.67
3708 5789 5.245531 GGTCTGGAGATGAATGTGTTTACA 58.754 41.667 0.00 0.00 41.89 2.41
3812 5910 8.352942 GTGAACCAAGATCAAATTACTTGTTCT 58.647 33.333 4.57 0.00 43.13 3.01
3829 5927 5.196341 TGTTCTAAGACACACGACAGATT 57.804 39.130 0.00 0.00 0.00 2.40
3830 5928 4.982295 TGTTCTAAGACACACGACAGATTG 59.018 41.667 0.00 0.00 0.00 2.67
3889 5987 5.297776 ACTTATGCACACAAGATTGCTATCC 59.702 40.000 10.59 0.00 39.62 2.59
3897 6022 5.200454 CACAAGATTGCTATCCGAAATTCG 58.800 41.667 8.62 8.62 40.07 3.34
3938 6063 8.877808 AAAAAGAGTCAAACAATTCTTCATCC 57.122 30.769 0.00 0.00 0.00 3.51
3964 6089 3.198200 AGAGAATTGTGAGCTGAGCATCT 59.802 43.478 7.39 0.00 34.92 2.90
3973 6098 0.822811 GCTGAGCATCTCTCACTCCA 59.177 55.000 0.00 0.00 46.34 3.86
4004 6184 6.183360 CCCCTGACTATTACAAGACAGTAGTC 60.183 46.154 0.00 0.00 45.31 2.59
4026 6206 0.987294 AGGTACAATGAGGCTGCACT 59.013 50.000 0.50 0.00 0.00 4.40
4027 6207 2.187958 AGGTACAATGAGGCTGCACTA 58.812 47.619 0.50 0.00 0.00 2.74
4031 6211 4.201950 GGTACAATGAGGCTGCACTAAATG 60.202 45.833 0.50 0.00 0.00 2.32
4032 6212 3.689347 ACAATGAGGCTGCACTAAATGA 58.311 40.909 0.50 0.00 0.00 2.57
4033 6213 3.441572 ACAATGAGGCTGCACTAAATGAC 59.558 43.478 0.50 0.00 0.00 3.06
4034 6214 2.113860 TGAGGCTGCACTAAATGACC 57.886 50.000 0.50 0.00 0.00 4.02
4035 6215 1.350684 TGAGGCTGCACTAAATGACCA 59.649 47.619 0.50 0.00 0.00 4.02
4036 6216 2.012673 GAGGCTGCACTAAATGACCAG 58.987 52.381 0.50 0.00 0.00 4.00
4037 6217 1.352352 AGGCTGCACTAAATGACCAGT 59.648 47.619 0.50 0.00 0.00 4.00
4038 6218 1.470098 GGCTGCACTAAATGACCAGTG 59.530 52.381 0.50 0.00 44.07 3.66
4039 6219 2.426522 GCTGCACTAAATGACCAGTGA 58.573 47.619 5.93 0.00 43.99 3.41
4040 6220 2.417933 GCTGCACTAAATGACCAGTGAG 59.582 50.000 5.93 2.45 43.99 3.51
4041 6221 3.866066 GCTGCACTAAATGACCAGTGAGA 60.866 47.826 5.93 0.00 43.99 3.27
4065 6256 2.617276 CCCTGTGTGAGCTGACATGATT 60.617 50.000 9.85 0.00 0.00 2.57
4100 6291 6.423001 GGTAGACAACACTACAAAACTACCAG 59.577 42.308 0.00 0.00 44.29 4.00
4104 6295 2.224695 ACACTACAAAACTACCAGGCCC 60.225 50.000 0.00 0.00 0.00 5.80
4112 6303 0.251341 ACTACCAGGCCCTTTGCTTG 60.251 55.000 0.00 0.00 46.08 4.01
4214 6405 3.244616 CCATAGGGTCAGCTGGGG 58.755 66.667 15.13 0.83 0.00 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.448438 ACGACCACAAATATTGCATATATGTAT 57.552 29.630 14.14 10.25 0.00 2.29
13 14 8.840833 ACGACCACAAATATTGCATATATGTA 57.159 30.769 14.14 7.00 0.00 2.29
14 15 7.744087 ACGACCACAAATATTGCATATATGT 57.256 32.000 14.14 0.00 0.00 2.29
15 16 9.920826 GATACGACCACAAATATTGCATATATG 57.079 33.333 8.45 8.45 0.00 1.78
16 17 9.109393 GGATACGACCACAAATATTGCATATAT 57.891 33.333 0.00 0.00 0.00 0.86
17 18 8.097662 TGGATACGACCACAAATATTGCATATA 58.902 33.333 0.00 0.00 42.51 0.86
18 19 6.939730 TGGATACGACCACAAATATTGCATAT 59.060 34.615 0.00 0.00 42.51 1.78
19 20 6.292150 TGGATACGACCACAAATATTGCATA 58.708 36.000 0.00 0.00 42.51 3.14
20 21 5.129634 TGGATACGACCACAAATATTGCAT 58.870 37.500 0.00 0.00 42.51 3.96
21 22 4.518249 TGGATACGACCACAAATATTGCA 58.482 39.130 0.00 0.00 42.51 4.08
22 23 5.493133 TTGGATACGACCACAAATATTGC 57.507 39.130 0.00 0.00 39.85 3.56
23 24 5.588648 ACCTTGGATACGACCACAAATATTG 59.411 40.000 0.00 0.00 39.85 1.90
24 25 5.751586 ACCTTGGATACGACCACAAATATT 58.248 37.500 0.00 0.00 39.85 1.28
25 26 5.367945 ACCTTGGATACGACCACAAATAT 57.632 39.130 0.00 0.00 39.85 1.28
26 27 4.829872 ACCTTGGATACGACCACAAATA 57.170 40.909 0.00 0.00 39.85 1.40
27 28 3.713826 ACCTTGGATACGACCACAAAT 57.286 42.857 0.00 0.00 39.85 2.32
28 29 3.579586 ACTACCTTGGATACGACCACAAA 59.420 43.478 0.00 0.00 39.85 2.83
29 30 3.167485 ACTACCTTGGATACGACCACAA 58.833 45.455 0.00 0.00 39.85 3.33
30 31 2.756760 GACTACCTTGGATACGACCACA 59.243 50.000 0.00 0.00 39.85 4.17
31 32 2.756760 TGACTACCTTGGATACGACCAC 59.243 50.000 0.00 0.00 39.85 4.16
32 33 3.090210 TGACTACCTTGGATACGACCA 57.910 47.619 0.00 0.00 42.51 4.02
33 34 3.383825 ACATGACTACCTTGGATACGACC 59.616 47.826 0.00 0.00 42.51 4.79
34 35 4.499357 GGACATGACTACCTTGGATACGAC 60.499 50.000 0.00 0.00 42.51 4.34
35 36 3.635373 GGACATGACTACCTTGGATACGA 59.365 47.826 0.00 0.00 42.51 3.43
36 37 3.637229 AGGACATGACTACCTTGGATACG 59.363 47.826 0.00 0.00 42.51 3.06
37 38 5.615925 AAGGACATGACTACCTTGGATAC 57.384 43.478 0.00 0.00 41.64 2.24
38 39 7.931015 AATAAGGACATGACTACCTTGGATA 57.069 36.000 19.66 7.76 42.85 2.59
39 40 6.831664 AATAAGGACATGACTACCTTGGAT 57.168 37.500 19.66 9.78 42.85 3.41
40 41 7.130099 TCTAATAAGGACATGACTACCTTGGA 58.870 38.462 19.66 12.96 42.85 3.53
41 42 7.361457 TCTAATAAGGACATGACTACCTTGG 57.639 40.000 19.66 11.70 42.85 3.61
42 43 9.838339 ATTTCTAATAAGGACATGACTACCTTG 57.162 33.333 19.66 9.53 42.85 3.61
43 44 9.838339 CATTTCTAATAAGGACATGACTACCTT 57.162 33.333 16.85 16.85 44.67 3.50
44 45 8.432805 CCATTTCTAATAAGGACATGACTACCT 58.567 37.037 0.00 0.00 35.36 3.08
45 46 7.173390 GCCATTTCTAATAAGGACATGACTACC 59.827 40.741 0.00 0.00 0.00 3.18
46 47 7.173390 GGCCATTTCTAATAAGGACATGACTAC 59.827 40.741 0.00 0.00 0.00 2.73
47 48 7.072454 AGGCCATTTCTAATAAGGACATGACTA 59.928 37.037 5.01 0.00 0.00 2.59
48 49 6.064717 GGCCATTTCTAATAAGGACATGACT 58.935 40.000 0.00 0.00 0.00 3.41
49 50 6.016777 CAGGCCATTTCTAATAAGGACATGAC 60.017 42.308 5.01 0.00 0.00 3.06
50 51 6.064060 CAGGCCATTTCTAATAAGGACATGA 58.936 40.000 5.01 0.00 0.00 3.07
51 52 6.064060 TCAGGCCATTTCTAATAAGGACATG 58.936 40.000 5.01 0.00 0.00 3.21
52 53 6.266131 TCAGGCCATTTCTAATAAGGACAT 57.734 37.500 5.01 0.00 0.00 3.06
53 54 5.708736 TCAGGCCATTTCTAATAAGGACA 57.291 39.130 5.01 0.00 0.00 4.02
54 55 7.588497 AAATCAGGCCATTTCTAATAAGGAC 57.412 36.000 5.01 0.00 0.00 3.85
55 56 9.354673 CTAAAATCAGGCCATTTCTAATAAGGA 57.645 33.333 5.01 0.00 0.00 3.36
56 57 8.084684 GCTAAAATCAGGCCATTTCTAATAAGG 58.915 37.037 5.01 0.00 0.00 2.69
57 58 8.632679 TGCTAAAATCAGGCCATTTCTAATAAG 58.367 33.333 5.01 0.00 0.00 1.73
58 59 8.532186 TGCTAAAATCAGGCCATTTCTAATAA 57.468 30.769 5.01 0.00 0.00 1.40
59 60 7.255590 GCTGCTAAAATCAGGCCATTTCTAATA 60.256 37.037 5.01 0.00 32.41 0.98
60 61 6.462067 GCTGCTAAAATCAGGCCATTTCTAAT 60.462 38.462 5.01 0.00 32.41 1.73
61 62 5.163519 GCTGCTAAAATCAGGCCATTTCTAA 60.164 40.000 5.01 0.00 32.41 2.10
62 63 4.339247 GCTGCTAAAATCAGGCCATTTCTA 59.661 41.667 5.01 0.00 32.41 2.10
63 64 3.131755 GCTGCTAAAATCAGGCCATTTCT 59.868 43.478 5.01 0.00 32.41 2.52
64 65 3.119029 TGCTGCTAAAATCAGGCCATTTC 60.119 43.478 5.01 0.00 32.41 2.17
65 66 2.833338 TGCTGCTAAAATCAGGCCATTT 59.167 40.909 5.01 0.00 32.41 2.32
66 67 2.459644 TGCTGCTAAAATCAGGCCATT 58.540 42.857 5.01 0.00 32.41 3.16
67 68 2.148446 TGCTGCTAAAATCAGGCCAT 57.852 45.000 5.01 0.00 32.41 4.40
68 69 1.921982 TTGCTGCTAAAATCAGGCCA 58.078 45.000 5.01 0.00 32.41 5.36
69 70 3.192466 CATTTGCTGCTAAAATCAGGCC 58.808 45.455 0.00 0.00 32.41 5.19
70 71 3.853475 ACATTTGCTGCTAAAATCAGGC 58.147 40.909 0.00 0.00 32.41 4.85
71 72 4.628333 CCAACATTTGCTGCTAAAATCAGG 59.372 41.667 0.00 0.00 32.41 3.86
72 73 5.232463 ACCAACATTTGCTGCTAAAATCAG 58.768 37.500 0.00 0.00 34.79 2.90
73 74 5.212532 ACCAACATTTGCTGCTAAAATCA 57.787 34.783 0.00 0.00 0.00 2.57
74 75 5.466393 ACAACCAACATTTGCTGCTAAAATC 59.534 36.000 0.00 0.00 0.00 2.17
75 76 5.367302 ACAACCAACATTTGCTGCTAAAAT 58.633 33.333 0.00 0.00 0.00 1.82
76 77 4.764172 ACAACCAACATTTGCTGCTAAAA 58.236 34.783 0.00 0.00 0.00 1.52
77 78 4.399004 ACAACCAACATTTGCTGCTAAA 57.601 36.364 0.00 0.45 0.00 1.85
78 79 4.118410 CAACAACCAACATTTGCTGCTAA 58.882 39.130 0.00 0.00 0.00 3.09
79 80 3.382865 TCAACAACCAACATTTGCTGCTA 59.617 39.130 0.00 0.00 0.00 3.49
80 81 2.168106 TCAACAACCAACATTTGCTGCT 59.832 40.909 0.00 0.00 0.00 4.24
81 82 2.540931 CTCAACAACCAACATTTGCTGC 59.459 45.455 0.00 0.00 0.00 5.25
82 83 3.784338 ACTCAACAACCAACATTTGCTG 58.216 40.909 0.00 0.00 0.00 4.41
83 84 3.701040 AGACTCAACAACCAACATTTGCT 59.299 39.130 0.00 0.00 0.00 3.91
84 85 3.798337 CAGACTCAACAACCAACATTTGC 59.202 43.478 0.00 0.00 0.00 3.68
85 86 5.247507 TCAGACTCAACAACCAACATTTG 57.752 39.130 0.00 0.00 0.00 2.32
86 87 6.772716 ACTATCAGACTCAACAACCAACATTT 59.227 34.615 0.00 0.00 0.00 2.32
87 88 6.299141 ACTATCAGACTCAACAACCAACATT 58.701 36.000 0.00 0.00 0.00 2.71
88 89 5.869579 ACTATCAGACTCAACAACCAACAT 58.130 37.500 0.00 0.00 0.00 2.71
89 90 5.290493 ACTATCAGACTCAACAACCAACA 57.710 39.130 0.00 0.00 0.00 3.33
90 91 5.992217 AGAACTATCAGACTCAACAACCAAC 59.008 40.000 0.00 0.00 0.00 3.77
91 92 6.174720 AGAACTATCAGACTCAACAACCAA 57.825 37.500 0.00 0.00 0.00 3.67
92 93 5.808366 AGAACTATCAGACTCAACAACCA 57.192 39.130 0.00 0.00 0.00 3.67
93 94 7.355778 CAAAAGAACTATCAGACTCAACAACC 58.644 38.462 0.00 0.00 0.00 3.77
94 95 6.853362 GCAAAAGAACTATCAGACTCAACAAC 59.147 38.462 0.00 0.00 0.00 3.32
95 96 6.292865 CGCAAAAGAACTATCAGACTCAACAA 60.293 38.462 0.00 0.00 0.00 2.83
96 97 5.177511 CGCAAAAGAACTATCAGACTCAACA 59.822 40.000 0.00 0.00 0.00 3.33
97 98 5.389935 CCGCAAAAGAACTATCAGACTCAAC 60.390 44.000 0.00 0.00 0.00 3.18
98 99 4.690748 CCGCAAAAGAACTATCAGACTCAA 59.309 41.667 0.00 0.00 0.00 3.02
99 100 4.245660 CCGCAAAAGAACTATCAGACTCA 58.754 43.478 0.00 0.00 0.00 3.41
100 101 3.619038 CCCGCAAAAGAACTATCAGACTC 59.381 47.826 0.00 0.00 0.00 3.36
101 102 3.600388 CCCGCAAAAGAACTATCAGACT 58.400 45.455 0.00 0.00 0.00 3.24
102 103 2.678336 CCCCGCAAAAGAACTATCAGAC 59.322 50.000 0.00 0.00 0.00 3.51
103 104 2.355716 CCCCCGCAAAAGAACTATCAGA 60.356 50.000 0.00 0.00 0.00 3.27
104 105 2.017049 CCCCCGCAAAAGAACTATCAG 58.983 52.381 0.00 0.00 0.00 2.90
105 106 1.631388 TCCCCCGCAAAAGAACTATCA 59.369 47.619 0.00 0.00 0.00 2.15
106 107 2.413310 TCCCCCGCAAAAGAACTATC 57.587 50.000 0.00 0.00 0.00 2.08
107 108 3.201266 TGTATCCCCCGCAAAAGAACTAT 59.799 43.478 0.00 0.00 0.00 2.12
108 109 2.572556 TGTATCCCCCGCAAAAGAACTA 59.427 45.455 0.00 0.00 0.00 2.24
109 110 1.353022 TGTATCCCCCGCAAAAGAACT 59.647 47.619 0.00 0.00 0.00 3.01
110 111 1.471287 GTGTATCCCCCGCAAAAGAAC 59.529 52.381 0.00 0.00 0.00 3.01
111 112 1.074084 TGTGTATCCCCCGCAAAAGAA 59.926 47.619 0.00 0.00 0.00 2.52
112 113 0.693622 TGTGTATCCCCCGCAAAAGA 59.306 50.000 0.00 0.00 0.00 2.52
113 114 0.808755 GTGTGTATCCCCCGCAAAAG 59.191 55.000 0.00 0.00 0.00 2.27
114 115 0.110678 TGTGTGTATCCCCCGCAAAA 59.889 50.000 0.00 0.00 0.00 2.44
115 116 0.322098 CTGTGTGTATCCCCCGCAAA 60.322 55.000 0.00 0.00 0.00 3.68
116 117 1.298340 CTGTGTGTATCCCCCGCAA 59.702 57.895 0.00 0.00 0.00 4.85
117 118 0.615261 TACTGTGTGTATCCCCCGCA 60.615 55.000 0.00 0.00 0.00 5.69
118 119 0.179092 GTACTGTGTGTATCCCCCGC 60.179 60.000 0.00 0.00 33.23 6.13
119 120 0.101759 CGTACTGTGTGTATCCCCCG 59.898 60.000 0.00 0.00 33.23 5.73
120 121 1.407979 CTCGTACTGTGTGTATCCCCC 59.592 57.143 0.00 0.00 33.23 5.40
121 122 1.202382 GCTCGTACTGTGTGTATCCCC 60.202 57.143 0.00 0.00 33.23 4.81
122 123 1.475280 TGCTCGTACTGTGTGTATCCC 59.525 52.381 0.00 0.00 33.23 3.85
123 124 2.422479 TCTGCTCGTACTGTGTGTATCC 59.578 50.000 0.00 0.00 33.23 2.59
124 125 3.759527 TCTGCTCGTACTGTGTGTATC 57.240 47.619 0.00 0.00 33.23 2.24
125 126 4.424626 CATTCTGCTCGTACTGTGTGTAT 58.575 43.478 0.00 0.00 33.23 2.29
126 127 3.833442 CATTCTGCTCGTACTGTGTGTA 58.167 45.455 0.00 0.00 0.00 2.90
127 128 2.677199 CATTCTGCTCGTACTGTGTGT 58.323 47.619 0.00 0.00 0.00 3.72
128 129 1.391485 GCATTCTGCTCGTACTGTGTG 59.609 52.381 0.00 0.00 40.96 3.82
129 130 1.000843 TGCATTCTGCTCGTACTGTGT 59.999 47.619 0.34 0.00 45.31 3.72
130 131 1.713597 TGCATTCTGCTCGTACTGTG 58.286 50.000 0.34 0.00 45.31 3.66
131 132 2.455674 TTGCATTCTGCTCGTACTGT 57.544 45.000 0.34 0.00 45.31 3.55
132 133 2.480037 TGTTTGCATTCTGCTCGTACTG 59.520 45.455 0.34 0.00 45.31 2.74
133 134 2.766313 TGTTTGCATTCTGCTCGTACT 58.234 42.857 0.34 0.00 45.31 2.73
134 135 3.058914 AGTTGTTTGCATTCTGCTCGTAC 60.059 43.478 0.34 0.00 45.31 3.67
135 136 3.138304 AGTTGTTTGCATTCTGCTCGTA 58.862 40.909 0.34 0.00 45.31 3.43
136 137 1.949525 AGTTGTTTGCATTCTGCTCGT 59.050 42.857 0.34 0.00 45.31 4.18
137 138 2.693797 AGTTGTTTGCATTCTGCTCG 57.306 45.000 0.34 0.00 45.31 5.03
165 166 9.685828 AATGCGTAAAACTAGAATTAGCAAAAA 57.314 25.926 0.00 0.00 35.67 1.94
174 175 4.155826 TGCAGCAATGCGTAAAACTAGAAT 59.844 37.500 0.00 0.00 37.69 2.40
186 187 1.226323 GCTTCTCTGCAGCAATGCG 60.226 57.895 9.47 0.00 37.22 4.73
229 230 8.449625 AGACTATTAGCTACTCCTTCCATAAGA 58.550 37.037 0.00 0.00 34.37 2.10
230 231 8.644374 AGACTATTAGCTACTCCTTCCATAAG 57.356 38.462 0.00 0.00 0.00 1.73
234 235 6.102910 ACCTAGACTATTAGCTACTCCTTCCA 59.897 42.308 0.00 0.00 0.00 3.53
235 236 6.545567 ACCTAGACTATTAGCTACTCCTTCC 58.454 44.000 0.00 0.00 0.00 3.46
236 237 9.223099 CTTACCTAGACTATTAGCTACTCCTTC 57.777 40.741 0.00 0.00 0.00 3.46
238 239 8.508969 TCTTACCTAGACTATTAGCTACTCCT 57.491 38.462 0.00 0.00 0.00 3.69
260 1894 9.520515 TGAGGTTCTATTGCTAAAAGAATTCTT 57.479 29.630 15.11 15.11 37.91 2.52
282 1916 5.972107 AGTGAAATTCCAGAACATTGAGG 57.028 39.130 0.00 0.00 0.00 3.86
296 1930 9.579932 AGAAGAATAAAGTCAGGAAGTGAAATT 57.420 29.630 0.00 0.00 36.74 1.82
302 1936 9.579932 AATTTGAGAAGAATAAAGTCAGGAAGT 57.420 29.630 0.00 0.00 0.00 3.01
320 1955 6.487331 ACAACCATACCGTTTACAATTTGAGA 59.513 34.615 2.79 0.00 0.00 3.27
336 1971 9.185680 ACTTTATCCCTTCAATAACAACCATAC 57.814 33.333 0.00 0.00 0.00 2.39
338 1973 8.664669 AACTTTATCCCTTCAATAACAACCAT 57.335 30.769 0.00 0.00 0.00 3.55
339 1974 8.485578 AAACTTTATCCCTTCAATAACAACCA 57.514 30.769 0.00 0.00 0.00 3.67
350 1985 8.173542 TGACAACCTTAAAACTTTATCCCTTC 57.826 34.615 0.00 0.00 0.00 3.46
351 1986 8.541899 TTGACAACCTTAAAACTTTATCCCTT 57.458 30.769 0.00 0.00 0.00 3.95
398 2033 3.729462 GCGTGTGTACTGCTGTTCAAAAA 60.729 43.478 0.09 0.00 0.00 1.94
399 2034 2.223157 GCGTGTGTACTGCTGTTCAAAA 60.223 45.455 0.09 0.00 0.00 2.44
400 2035 1.329292 GCGTGTGTACTGCTGTTCAAA 59.671 47.619 0.09 0.00 0.00 2.69
401 2036 0.934496 GCGTGTGTACTGCTGTTCAA 59.066 50.000 0.09 0.00 0.00 2.69
402 2037 0.179097 TGCGTGTGTACTGCTGTTCA 60.179 50.000 0.09 0.00 0.00 3.18
403 2038 0.934496 TTGCGTGTGTACTGCTGTTC 59.066 50.000 0.09 0.00 0.00 3.18
404 2039 0.937304 CTTGCGTGTGTACTGCTGTT 59.063 50.000 0.09 0.00 0.00 3.16
405 2040 1.498865 GCTTGCGTGTGTACTGCTGT 61.499 55.000 0.66 0.66 0.00 4.40
406 2041 1.205064 GCTTGCGTGTGTACTGCTG 59.795 57.895 0.00 0.00 0.00 4.41
407 2042 2.310233 CGCTTGCGTGTGTACTGCT 61.310 57.895 6.86 0.00 0.00 4.24
408 2043 2.170985 CGCTTGCGTGTGTACTGC 59.829 61.111 6.86 0.00 0.00 4.40
409 2044 2.170985 GCGCTTGCGTGTGTACTG 59.829 61.111 16.38 0.00 0.00 2.74
410 2045 2.022129 GAGCGCTTGCGTGTGTACT 61.022 57.895 13.26 3.73 45.69 2.73
411 2046 1.626654 ATGAGCGCTTGCGTGTGTAC 61.627 55.000 13.26 0.00 45.69 2.90
412 2047 0.109039 TATGAGCGCTTGCGTGTGTA 60.109 50.000 13.26 3.16 45.69 2.90
413 2048 1.374125 TATGAGCGCTTGCGTGTGT 60.374 52.632 13.26 4.04 45.69 3.72
414 2049 1.059369 GTATGAGCGCTTGCGTGTG 59.941 57.895 13.26 0.00 45.69 3.82
415 2050 0.740868 ATGTATGAGCGCTTGCGTGT 60.741 50.000 13.26 4.39 45.69 4.49
416 2051 1.071239 GTATGTATGAGCGCTTGCGTG 60.071 52.381 13.26 0.00 45.69 5.34
417 2052 1.209128 GTATGTATGAGCGCTTGCGT 58.791 50.000 13.26 3.97 45.69 5.24
418 2053 1.071239 GTGTATGTATGAGCGCTTGCG 60.071 52.381 13.26 10.90 45.69 4.85
419 2054 1.071239 CGTGTATGTATGAGCGCTTGC 60.071 52.381 13.26 0.00 39.58 4.01
420 2055 1.071239 GCGTGTATGTATGAGCGCTTG 60.071 52.381 13.26 0.00 41.37 4.01
421 2056 1.209128 GCGTGTATGTATGAGCGCTT 58.791 50.000 13.26 0.00 41.37 4.68
422 2057 0.102300 TGCGTGTATGTATGAGCGCT 59.898 50.000 11.27 11.27 44.34 5.92
423 2058 1.139989 ATGCGTGTATGTATGAGCGC 58.860 50.000 0.00 0.00 44.29 5.92
424 2059 3.119628 GTGTATGCGTGTATGTATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
425 2060 4.299155 AGTGTATGCGTGTATGTATGAGC 58.701 43.478 0.00 0.00 0.00 4.26
426 2061 5.519722 TGAGTGTATGCGTGTATGTATGAG 58.480 41.667 0.00 0.00 0.00 2.90
427 2062 5.508200 TGAGTGTATGCGTGTATGTATGA 57.492 39.130 0.00 0.00 0.00 2.15
428 2063 5.346011 GGATGAGTGTATGCGTGTATGTATG 59.654 44.000 0.00 0.00 0.00 2.39
429 2064 5.470368 GGATGAGTGTATGCGTGTATGTAT 58.530 41.667 0.00 0.00 0.00 2.29
430 2065 4.261867 GGGATGAGTGTATGCGTGTATGTA 60.262 45.833 0.00 0.00 0.00 2.29
431 2066 3.492656 GGGATGAGTGTATGCGTGTATGT 60.493 47.826 0.00 0.00 0.00 2.29
432 2067 3.059884 GGGATGAGTGTATGCGTGTATG 58.940 50.000 0.00 0.00 0.00 2.39
433 2068 2.965831 AGGGATGAGTGTATGCGTGTAT 59.034 45.455 0.00 0.00 0.00 2.29
434 2069 2.384828 AGGGATGAGTGTATGCGTGTA 58.615 47.619 0.00 0.00 0.00 2.90
435 2070 1.195115 AGGGATGAGTGTATGCGTGT 58.805 50.000 0.00 0.00 0.00 4.49
436 2071 3.005791 TCATAGGGATGAGTGTATGCGTG 59.994 47.826 0.00 0.00 37.15 5.34
437 2072 3.230976 TCATAGGGATGAGTGTATGCGT 58.769 45.455 0.00 0.00 37.15 5.24
438 2073 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
439 2074 4.394300 GCATTCATAGGGATGAGTGTATGC 59.606 45.833 0.00 8.64 46.40 3.14
440 2075 4.628766 CGCATTCATAGGGATGAGTGTATG 59.371 45.833 0.00 3.63 46.40 2.39
441 2076 4.825422 CGCATTCATAGGGATGAGTGTAT 58.175 43.478 0.00 0.00 46.40 2.29
442 2077 3.554960 GCGCATTCATAGGGATGAGTGTA 60.555 47.826 0.30 0.00 46.40 2.90
443 2078 2.808202 GCGCATTCATAGGGATGAGTGT 60.808 50.000 0.30 0.00 46.40 3.55
445 2080 1.606480 CGCGCATTCATAGGGATGAGT 60.606 52.381 8.75 0.00 43.03 3.41
446 2081 1.073964 CGCGCATTCATAGGGATGAG 58.926 55.000 8.75 0.00 43.03 2.90
447 2082 0.950555 GCGCGCATTCATAGGGATGA 60.951 55.000 29.10 0.00 40.45 2.92
448 2083 1.499056 GCGCGCATTCATAGGGATG 59.501 57.895 29.10 0.00 0.00 3.51
449 2084 2.029288 CGCGCGCATTCATAGGGAT 61.029 57.895 32.61 0.00 0.00 3.85
450 2085 2.661537 CGCGCGCATTCATAGGGA 60.662 61.111 32.61 0.00 0.00 4.20
451 2086 4.374702 GCGCGCGCATTCATAGGG 62.375 66.667 46.11 12.36 41.49 3.53
464 2099 1.966493 GAATAGGGTGTGTGTGCGCG 61.966 60.000 0.00 0.00 0.00 6.86
465 2100 1.644786 GGAATAGGGTGTGTGTGCGC 61.645 60.000 0.00 0.00 0.00 6.09
466 2101 0.036388 AGGAATAGGGTGTGTGTGCG 60.036 55.000 0.00 0.00 0.00 5.34
467 2102 3.118408 TCATAGGAATAGGGTGTGTGTGC 60.118 47.826 0.00 0.00 0.00 4.57
468 2103 4.697514 CTCATAGGAATAGGGTGTGTGTG 58.302 47.826 0.00 0.00 0.00 3.82
469 2104 3.134804 GCTCATAGGAATAGGGTGTGTGT 59.865 47.826 0.00 0.00 0.00 3.72
470 2105 3.134623 TGCTCATAGGAATAGGGTGTGTG 59.865 47.826 0.00 0.00 0.00 3.82
471 2106 3.134804 GTGCTCATAGGAATAGGGTGTGT 59.865 47.826 0.00 0.00 0.00 3.72
472 2107 3.389329 AGTGCTCATAGGAATAGGGTGTG 59.611 47.826 0.00 0.00 0.00 3.82
473 2108 3.658725 AGTGCTCATAGGAATAGGGTGT 58.341 45.455 0.00 0.00 0.00 4.16
474 2109 4.696479 AAGTGCTCATAGGAATAGGGTG 57.304 45.455 0.00 0.00 0.00 4.61
475 2110 4.971924 AGAAAGTGCTCATAGGAATAGGGT 59.028 41.667 0.00 0.00 0.00 4.34
476 2111 5.559148 AGAAAGTGCTCATAGGAATAGGG 57.441 43.478 0.00 0.00 0.00 3.53
477 2112 8.964476 TTTAAGAAAGTGCTCATAGGAATAGG 57.036 34.615 0.00 0.00 0.00 2.57
483 2118 9.490663 CGTAAATTTTAAGAAAGTGCTCATAGG 57.509 33.333 0.00 0.00 0.00 2.57
486 2121 9.612620 CTTCGTAAATTTTAAGAAAGTGCTCAT 57.387 29.630 15.26 0.00 0.00 2.90
487 2122 8.617809 ACTTCGTAAATTTTAAGAAAGTGCTCA 58.382 29.630 15.26 0.00 0.00 4.26
488 2123 9.104126 GACTTCGTAAATTTTAAGAAAGTGCTC 57.896 33.333 15.26 5.40 0.00 4.26
489 2124 7.797123 CGACTTCGTAAATTTTAAGAAAGTGCT 59.203 33.333 15.26 1.22 34.11 4.40
490 2125 7.407976 GCGACTTCGTAAATTTTAAGAAAGTGC 60.408 37.037 15.26 14.26 42.22 4.40
491 2126 7.059147 GGCGACTTCGTAAATTTTAAGAAAGTG 59.941 37.037 15.26 8.89 42.22 3.16
492 2127 7.073883 GGCGACTTCGTAAATTTTAAGAAAGT 58.926 34.615 15.26 14.44 42.22 2.66
493 2128 6.245710 CGGCGACTTCGTAAATTTTAAGAAAG 59.754 38.462 15.26 12.32 42.22 2.62
494 2129 6.072733 CGGCGACTTCGTAAATTTTAAGAAA 58.927 36.000 15.26 4.10 42.22 2.52
495 2130 5.177327 ACGGCGACTTCGTAAATTTTAAGAA 59.823 36.000 16.62 14.17 42.22 2.52
496 2131 4.685628 ACGGCGACTTCGTAAATTTTAAGA 59.314 37.500 16.62 1.32 42.22 2.10
497 2132 4.949756 ACGGCGACTTCGTAAATTTTAAG 58.050 39.130 16.62 1.31 42.22 1.85
498 2133 4.988708 ACGGCGACTTCGTAAATTTTAA 57.011 36.364 16.62 0.00 42.22 1.52
499 2134 4.562394 CCTACGGCGACTTCGTAAATTTTA 59.438 41.667 16.62 0.00 41.62 1.52
500 2135 3.368843 CCTACGGCGACTTCGTAAATTTT 59.631 43.478 16.62 0.00 41.62 1.82
501 2136 2.925563 CCTACGGCGACTTCGTAAATTT 59.074 45.455 16.62 0.00 41.62 1.82
502 2137 2.164219 TCCTACGGCGACTTCGTAAATT 59.836 45.455 16.62 0.00 41.62 1.82
503 2138 1.745087 TCCTACGGCGACTTCGTAAAT 59.255 47.619 16.62 0.00 41.62 1.40
504 2139 1.164411 TCCTACGGCGACTTCGTAAA 58.836 50.000 16.62 0.00 41.62 2.01
505 2140 1.135689 GTTCCTACGGCGACTTCGTAA 60.136 52.381 16.62 0.00 41.62 3.18
506 2141 0.447801 GTTCCTACGGCGACTTCGTA 59.552 55.000 16.62 0.00 41.38 3.43
507 2142 1.211190 GTTCCTACGGCGACTTCGT 59.789 57.895 16.62 0.00 43.64 3.85
508 2143 1.866496 CGTTCCTACGGCGACTTCG 60.866 63.158 16.62 6.73 43.94 3.79
509 2144 4.068302 CGTTCCTACGGCGACTTC 57.932 61.111 16.62 0.00 43.94 3.01
522 2157 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
523 2158 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
524 2159 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
525 2160 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
526 2161 0.035915 GGCTTTCAGTGGGAGGAGAC 60.036 60.000 0.00 0.00 0.00 3.36
527 2162 1.201429 GGGCTTTCAGTGGGAGGAGA 61.201 60.000 0.00 0.00 0.00 3.71
528 2163 1.301293 GGGCTTTCAGTGGGAGGAG 59.699 63.158 0.00 0.00 0.00 3.69
529 2164 0.846427 ATGGGCTTTCAGTGGGAGGA 60.846 55.000 0.00 0.00 0.00 3.71
530 2165 0.394899 GATGGGCTTTCAGTGGGAGG 60.395 60.000 0.00 0.00 0.00 4.30
531 2166 0.329261 TGATGGGCTTTCAGTGGGAG 59.671 55.000 0.00 0.00 0.00 4.30
532 2167 0.038166 GTGATGGGCTTTCAGTGGGA 59.962 55.000 0.00 0.00 0.00 4.37
533 2168 0.967380 GGTGATGGGCTTTCAGTGGG 60.967 60.000 0.00 0.00 0.00 4.61
534 2169 0.251297 TGGTGATGGGCTTTCAGTGG 60.251 55.000 0.00 0.00 0.00 4.00
535 2170 1.619654 TTGGTGATGGGCTTTCAGTG 58.380 50.000 0.00 0.00 0.00 3.66
536 2171 2.380064 TTTGGTGATGGGCTTTCAGT 57.620 45.000 0.00 0.00 0.00 3.41
537 2172 3.749665 TTTTTGGTGATGGGCTTTCAG 57.250 42.857 0.00 0.00 0.00 3.02
538 2173 4.347583 AGAATTTTTGGTGATGGGCTTTCA 59.652 37.500 0.00 0.00 0.00 2.69
539 2174 4.692155 CAGAATTTTTGGTGATGGGCTTTC 59.308 41.667 0.00 0.00 0.00 2.62
540 2175 4.347583 TCAGAATTTTTGGTGATGGGCTTT 59.652 37.500 0.00 0.00 0.00 3.51
541 2176 3.903090 TCAGAATTTTTGGTGATGGGCTT 59.097 39.130 0.00 0.00 0.00 4.35
542 2177 3.509442 TCAGAATTTTTGGTGATGGGCT 58.491 40.909 0.00 0.00 0.00 5.19
543 2178 3.959535 TCAGAATTTTTGGTGATGGGC 57.040 42.857 0.00 0.00 0.00 5.36
544 2179 8.845413 TTTATTTCAGAATTTTTGGTGATGGG 57.155 30.769 0.00 0.00 0.00 4.00
548 2183 9.709495 CTGGATTTATTTCAGAATTTTTGGTGA 57.291 29.630 0.00 0.00 0.00 4.02
549 2184 9.709495 TCTGGATTTATTTCAGAATTTTTGGTG 57.291 29.630 0.00 0.00 34.97 4.17
563 2198 9.807649 GTGCTCACATTATTTCTGGATTTATTT 57.192 29.630 0.00 0.00 0.00 1.40
564 2199 8.416329 GGTGCTCACATTATTTCTGGATTTATT 58.584 33.333 2.21 0.00 0.00 1.40
565 2200 7.560991 TGGTGCTCACATTATTTCTGGATTTAT 59.439 33.333 2.21 0.00 0.00 1.40
566 2201 6.889177 TGGTGCTCACATTATTTCTGGATTTA 59.111 34.615 2.21 0.00 0.00 1.40
567 2202 5.716228 TGGTGCTCACATTATTTCTGGATTT 59.284 36.000 2.21 0.00 0.00 2.17
568 2203 5.263599 TGGTGCTCACATTATTTCTGGATT 58.736 37.500 2.21 0.00 0.00 3.01
569 2204 4.858850 TGGTGCTCACATTATTTCTGGAT 58.141 39.130 2.21 0.00 0.00 3.41
570 2205 4.264253 CTGGTGCTCACATTATTTCTGGA 58.736 43.478 2.21 0.00 0.00 3.86
571 2206 3.379372 CCTGGTGCTCACATTATTTCTGG 59.621 47.826 2.21 0.00 0.00 3.86
572 2207 4.095483 GTCCTGGTGCTCACATTATTTCTG 59.905 45.833 2.21 0.00 0.00 3.02
573 2208 4.018960 AGTCCTGGTGCTCACATTATTTCT 60.019 41.667 2.21 0.00 0.00 2.52
574 2209 4.265073 AGTCCTGGTGCTCACATTATTTC 58.735 43.478 2.21 0.00 0.00 2.17
575 2210 4.307032 AGTCCTGGTGCTCACATTATTT 57.693 40.909 2.21 0.00 0.00 1.40
576 2211 4.012374 CAAGTCCTGGTGCTCACATTATT 58.988 43.478 2.21 0.00 0.00 1.40
577 2212 3.264193 TCAAGTCCTGGTGCTCACATTAT 59.736 43.478 2.21 0.00 0.00 1.28
578 2213 2.637382 TCAAGTCCTGGTGCTCACATTA 59.363 45.455 2.21 0.00 0.00 1.90
579 2214 1.421268 TCAAGTCCTGGTGCTCACATT 59.579 47.619 2.21 0.00 0.00 2.71
580 2215 1.059098 TCAAGTCCTGGTGCTCACAT 58.941 50.000 2.21 0.00 0.00 3.21
581 2216 0.836606 TTCAAGTCCTGGTGCTCACA 59.163 50.000 2.21 0.00 0.00 3.58
582 2217 1.230324 GTTCAAGTCCTGGTGCTCAC 58.770 55.000 0.00 0.00 0.00 3.51
583 2218 0.108585 GGTTCAAGTCCTGGTGCTCA 59.891 55.000 0.00 0.00 0.00 4.26
584 2219 0.398318 AGGTTCAAGTCCTGGTGCTC 59.602 55.000 0.00 0.00 33.62 4.26
585 2220 0.109342 CAGGTTCAAGTCCTGGTGCT 59.891 55.000 4.27 0.00 46.03 4.40
586 2221 2.633860 CAGGTTCAAGTCCTGGTGC 58.366 57.895 4.27 0.00 46.03 5.01
591 2226 0.478507 CCCAACCAGGTTCAAGTCCT 59.521 55.000 0.12 0.00 34.66 3.85
592 2227 1.179174 GCCCAACCAGGTTCAAGTCC 61.179 60.000 0.12 0.00 34.66 3.85
593 2228 0.178990 AGCCCAACCAGGTTCAAGTC 60.179 55.000 0.12 0.00 34.66 3.01
594 2229 0.468029 CAGCCCAACCAGGTTCAAGT 60.468 55.000 0.12 0.00 34.66 3.16
595 2230 1.181098 CCAGCCCAACCAGGTTCAAG 61.181 60.000 0.12 0.00 34.66 3.02
596 2231 1.152567 CCAGCCCAACCAGGTTCAA 60.153 57.895 0.12 0.00 34.66 2.69
597 2232 2.520458 CCAGCCCAACCAGGTTCA 59.480 61.111 0.12 0.00 34.66 3.18
598 2233 2.283173 CCCAGCCCAACCAGGTTC 60.283 66.667 0.12 0.00 34.66 3.62
599 2234 3.914713 CCCCAGCCCAACCAGGTT 61.915 66.667 0.00 0.00 34.66 3.50
600 2235 2.798760 TATCCCCAGCCCAACCAGGT 62.799 60.000 0.00 0.00 34.66 4.00
601 2236 2.006415 TATCCCCAGCCCAACCAGG 61.006 63.158 0.00 0.00 37.03 4.45
602 2237 1.227383 GTATCCCCAGCCCAACCAG 59.773 63.158 0.00 0.00 0.00 4.00
603 2238 2.313427 GGTATCCCCAGCCCAACCA 61.313 63.158 0.00 0.00 0.00 3.67
604 2239 2.313427 TGGTATCCCCAGCCCAACC 61.313 63.158 0.00 0.00 38.72 3.77
605 2240 3.422204 TGGTATCCCCAGCCCAAC 58.578 61.111 0.00 0.00 38.72 3.77
615 2250 3.714798 TGGTTAGAGGGACAATGGTATCC 59.285 47.826 0.00 0.00 0.00 2.59
616 2251 5.513267 GGATGGTTAGAGGGACAATGGTATC 60.513 48.000 0.00 0.00 0.00 2.24
617 2252 4.351111 GGATGGTTAGAGGGACAATGGTAT 59.649 45.833 0.00 0.00 0.00 2.73
618 2253 3.714798 GGATGGTTAGAGGGACAATGGTA 59.285 47.826 0.00 0.00 0.00 3.25
619 2254 2.509964 GGATGGTTAGAGGGACAATGGT 59.490 50.000 0.00 0.00 0.00 3.55
620 2255 2.509548 TGGATGGTTAGAGGGACAATGG 59.490 50.000 0.00 0.00 0.00 3.16
621 2256 3.931907 TGGATGGTTAGAGGGACAATG 57.068 47.619 0.00 0.00 0.00 2.82
622 2257 3.053619 GGTTGGATGGTTAGAGGGACAAT 60.054 47.826 0.00 0.00 0.00 2.71
623 2258 2.307686 GGTTGGATGGTTAGAGGGACAA 59.692 50.000 0.00 0.00 0.00 3.18
624 2259 1.913419 GGTTGGATGGTTAGAGGGACA 59.087 52.381 0.00 0.00 0.00 4.02
625 2260 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
626 2261 2.352561 TGGTTGGATGGTTAGAGGGA 57.647 50.000 0.00 0.00 0.00 4.20
627 2262 3.356290 CTTTGGTTGGATGGTTAGAGGG 58.644 50.000 0.00 0.00 0.00 4.30
628 2263 3.245264 ACCTTTGGTTGGATGGTTAGAGG 60.245 47.826 0.00 0.00 27.29 3.69
629 2264 4.034285 ACCTTTGGTTGGATGGTTAGAG 57.966 45.455 0.00 0.00 27.29 2.43
630 2265 4.463050 AACCTTTGGTTGGATGGTTAGA 57.537 40.909 0.71 0.00 45.07 2.10
631 2266 5.897377 CTAACCTTTGGTTGGATGGTTAG 57.103 43.478 11.78 13.50 45.18 2.34
632 2267 5.327737 ACTAACCTTTGGTTGGATGGTTA 57.672 39.130 17.52 0.00 45.18 2.85
633 2268 4.193240 ACTAACCTTTGGTTGGATGGTT 57.807 40.909 17.52 0.00 45.18 3.67
634 2269 3.895704 ACTAACCTTTGGTTGGATGGT 57.104 42.857 17.52 4.64 45.18 3.55
635 2270 3.190535 CGAACTAACCTTTGGTTGGATGG 59.809 47.826 17.52 5.52 45.18 3.51
636 2271 3.365969 GCGAACTAACCTTTGGTTGGATG 60.366 47.826 17.52 8.78 45.18 3.51
637 2272 2.817844 GCGAACTAACCTTTGGTTGGAT 59.182 45.455 17.52 7.46 45.18 3.41
638 2273 2.158726 AGCGAACTAACCTTTGGTTGGA 60.159 45.455 17.52 0.00 45.18 3.53
639 2274 2.225727 GAGCGAACTAACCTTTGGTTGG 59.774 50.000 11.78 11.16 46.35 3.77
640 2275 3.139077 AGAGCGAACTAACCTTTGGTTG 58.861 45.455 11.78 5.16 46.35 3.77
642 2277 3.830755 TCTAGAGCGAACTAACCTTTGGT 59.169 43.478 0.00 0.00 37.65 3.67
643 2278 4.451629 TCTAGAGCGAACTAACCTTTGG 57.548 45.455 0.00 0.00 0.00 3.28
644 2279 6.969828 ATTTCTAGAGCGAACTAACCTTTG 57.030 37.500 0.00 0.00 0.00 2.77
645 2280 9.498176 TTTAATTTCTAGAGCGAACTAACCTTT 57.502 29.630 0.00 0.00 0.00 3.11
646 2281 8.933807 GTTTAATTTCTAGAGCGAACTAACCTT 58.066 33.333 0.00 0.00 0.00 3.50
647 2282 8.312564 AGTTTAATTTCTAGAGCGAACTAACCT 58.687 33.333 0.00 0.00 0.00 3.50
648 2283 8.476657 AGTTTAATTTCTAGAGCGAACTAACC 57.523 34.615 0.00 0.00 0.00 2.85
649 2284 9.742552 CAAGTTTAATTTCTAGAGCGAACTAAC 57.257 33.333 0.00 0.00 0.00 2.34
650 2285 9.701098 TCAAGTTTAATTTCTAGAGCGAACTAA 57.299 29.630 0.00 0.00 0.00 2.24
651 2286 9.355215 CTCAAGTTTAATTTCTAGAGCGAACTA 57.645 33.333 0.00 0.00 0.00 2.24
652 2287 7.873505 ACTCAAGTTTAATTTCTAGAGCGAACT 59.126 33.333 0.00 0.00 0.00 3.01
653 2288 7.952637 CACTCAAGTTTAATTTCTAGAGCGAAC 59.047 37.037 0.00 0.00 0.00 3.95
654 2289 7.870954 TCACTCAAGTTTAATTTCTAGAGCGAA 59.129 33.333 0.00 0.00 0.00 4.70
655 2290 7.375834 TCACTCAAGTTTAATTTCTAGAGCGA 58.624 34.615 0.00 0.00 0.00 4.93
656 2291 7.582435 TCACTCAAGTTTAATTTCTAGAGCG 57.418 36.000 0.00 0.00 0.00 5.03
657 2292 8.774586 TGTTCACTCAAGTTTAATTTCTAGAGC 58.225 33.333 0.00 0.00 0.00 4.09
793 2428 2.069273 CATCTCTTCCACGCGTTTTCT 58.931 47.619 10.22 0.00 0.00 2.52
811 2446 4.885907 GGATTGTCTGGAATCACACATCAT 59.114 41.667 0.00 0.00 34.50 2.45
849 2484 6.567959 TGTCTAGAATCACACATCATCACTC 58.432 40.000 0.00 0.00 0.00 3.51
924 2559 1.202580 ACTGTTGTGTCTGCTCTCCAC 60.203 52.381 0.00 0.00 0.00 4.02
957 2592 1.153997 GTCTTCTCGCACCTCCGTC 60.154 63.158 0.00 0.00 0.00 4.79
1539 3400 0.468400 TTGGGGGTTCTCCGTTTTGG 60.468 55.000 0.00 0.00 40.09 3.28
1581 3442 0.836606 TCAGCTTCCACCACTGAACA 59.163 50.000 0.00 0.00 37.49 3.18
1585 3446 2.613977 CCTAGTTCAGCTTCCACCACTG 60.614 54.545 0.00 0.00 0.00 3.66
1592 3453 3.369576 CCACTAACCCTAGTTCAGCTTCC 60.370 52.174 0.00 0.00 36.14 3.46
1622 3483 6.090483 TCTAGCTAAGCAGATATCACAACC 57.910 41.667 5.32 0.00 0.00 3.77
1703 3564 3.923461 GTCTGTAGAGCTGCACAAGTAAG 59.077 47.826 1.02 0.00 0.00 2.34
1803 3664 0.880278 GAGCACCTTGTTCGAGCACA 60.880 55.000 0.00 0.00 0.00 4.57
1804 3665 1.569479 GGAGCACCTTGTTCGAGCAC 61.569 60.000 0.00 0.00 0.00 4.40
1840 3701 1.002315 GGGTGTAGGTTTAAGGCGACA 59.998 52.381 0.00 0.00 0.00 4.35
1871 3732 6.017275 GCATTCAAATTCCCACAAACAAATGA 60.017 34.615 0.00 0.00 0.00 2.57
1974 3999 6.721318 TGCCTTTTGACTCCTTGTTATATCT 58.279 36.000 0.00 0.00 0.00 1.98
1980 4005 3.018423 ACTGCCTTTTGACTCCTTGTT 57.982 42.857 0.00 0.00 0.00 2.83
1988 4013 7.094377 TGGAGTATGATAAAACTGCCTTTTGAC 60.094 37.037 0.55 0.00 33.53 3.18
2027 4052 8.850156 GCAAAATTCCAGATATAACACATACCT 58.150 33.333 0.00 0.00 0.00 3.08
2028 4053 7.803189 CGCAAAATTCCAGATATAACACATACC 59.197 37.037 0.00 0.00 0.00 2.73
2224 4252 9.918630 CAGAAAGGGAAATGGCTTATAATATTG 57.081 33.333 0.00 0.00 0.00 1.90
2241 4269 6.540914 CGCATTAAGTATTTACCAGAAAGGGA 59.459 38.462 0.00 0.00 43.89 4.20
2306 4334 3.857157 AGGAAGTTAGCACTCACCAAA 57.143 42.857 0.00 0.00 33.96 3.28
2331 4359 2.711547 AGCCAGGAAACTCTGTTAGGTT 59.288 45.455 0.00 0.00 40.21 3.50
2345 4373 2.886523 CACAACAAATCAGAAGCCAGGA 59.113 45.455 0.00 0.00 0.00 3.86
2472 4500 3.282021 CAGGGCATACAGTATTGCAACT 58.718 45.455 0.00 0.00 0.00 3.16
2513 4541 2.808543 ACACTTCCTCAAACGCAGAATC 59.191 45.455 0.00 0.00 0.00 2.52
2564 4592 3.683802 AGAGTGAAGGGAATGAGCAAAG 58.316 45.455 0.00 0.00 0.00 2.77
2567 4595 3.582647 TGTAAGAGTGAAGGGAATGAGCA 59.417 43.478 0.00 0.00 0.00 4.26
2581 4609 4.589374 GCACCCTCCTACATATGTAAGAGT 59.411 45.833 28.01 16.12 37.37 3.24
2892 4969 6.617953 GCAATGTTTTCTCTAGTGTAACGGAC 60.618 42.308 0.00 0.00 45.86 4.79
2958 5035 4.045636 AGTTCACAGCATTGTTTGGTTC 57.954 40.909 0.00 0.00 34.62 3.62
2995 5072 3.628487 ACTAGATAGAACTGAGCACCGTC 59.372 47.826 0.00 0.00 0.00 4.79
3076 5153 1.741706 TCCACTCCGTCTTCGTATGAC 59.258 52.381 0.00 0.00 35.01 3.06
3215 5292 4.278669 TCAGTGTAAGTCCTCAGTGAGTTC 59.721 45.833 18.74 10.86 38.54 3.01
3223 5300 4.139786 AGTTACGTCAGTGTAAGTCCTCA 58.860 43.478 0.00 0.00 33.74 3.86
3313 5390 8.032451 TCGATATCATCAGTTTACAAACAGACA 58.968 33.333 3.12 0.00 41.30 3.41
3338 5415 5.992217 ACCAGTTTACAAACAGACTCTCATC 59.008 40.000 7.53 0.00 41.30 2.92
3345 5422 7.667043 TGATATCACCAGTTTACAAACAGAC 57.333 36.000 0.00 0.00 41.30 3.51
3361 5438 7.840342 ACAAACAGACTCTCATTGATATCAC 57.160 36.000 4.48 0.00 0.00 3.06
3395 5472 7.856145 ATCCTCACAAAACTCTCATTGATAC 57.144 36.000 0.00 0.00 0.00 2.24
3401 5478 3.760684 GCCAATCCTCACAAAACTCTCAT 59.239 43.478 0.00 0.00 0.00 2.90
3489 5566 1.273327 CCTCACAAAACTCCCCATTGC 59.727 52.381 0.00 0.00 0.00 3.56
3490 5567 2.875296 TCCTCACAAAACTCCCCATTG 58.125 47.619 0.00 0.00 0.00 2.82
3491 5568 3.833559 ATCCTCACAAAACTCCCCATT 57.166 42.857 0.00 0.00 0.00 3.16
3492 5569 3.434309 CAATCCTCACAAAACTCCCCAT 58.566 45.455 0.00 0.00 0.00 4.00
3493 5570 2.490718 CCAATCCTCACAAAACTCCCCA 60.491 50.000 0.00 0.00 0.00 4.96
3494 5571 2.171003 CCAATCCTCACAAAACTCCCC 58.829 52.381 0.00 0.00 0.00 4.81
3495 5572 2.876581 ACCAATCCTCACAAAACTCCC 58.123 47.619 0.00 0.00 0.00 4.30
3496 5573 3.636764 ACAACCAATCCTCACAAAACTCC 59.363 43.478 0.00 0.00 0.00 3.85
3497 5574 4.610945 CACAACCAATCCTCACAAAACTC 58.389 43.478 0.00 0.00 0.00 3.01
3500 5577 3.030291 AGCACAACCAATCCTCACAAAA 58.970 40.909 0.00 0.00 0.00 2.44
3501 5578 2.665165 AGCACAACCAATCCTCACAAA 58.335 42.857 0.00 0.00 0.00 2.83
3502 5579 2.363306 AGCACAACCAATCCTCACAA 57.637 45.000 0.00 0.00 0.00 3.33
3503 5580 2.363306 AAGCACAACCAATCCTCACA 57.637 45.000 0.00 0.00 0.00 3.58
3504 5581 2.887152 AGAAAGCACAACCAATCCTCAC 59.113 45.455 0.00 0.00 0.00 3.51
3505 5582 2.886523 CAGAAAGCACAACCAATCCTCA 59.113 45.455 0.00 0.00 0.00 3.86
3506 5583 2.887152 ACAGAAAGCACAACCAATCCTC 59.113 45.455 0.00 0.00 0.00 3.71
3507 5584 2.949447 ACAGAAAGCACAACCAATCCT 58.051 42.857 0.00 0.00 0.00 3.24
3508 5585 6.404734 CCTTATACAGAAAGCACAACCAATCC 60.405 42.308 0.00 0.00 0.00 3.01
3509 5586 6.151144 ACCTTATACAGAAAGCACAACCAATC 59.849 38.462 0.00 0.00 0.00 2.67
3510 5587 6.010219 ACCTTATACAGAAAGCACAACCAAT 58.990 36.000 0.00 0.00 0.00 3.16
3511 5588 5.381757 ACCTTATACAGAAAGCACAACCAA 58.618 37.500 0.00 0.00 0.00 3.67
3512 5589 4.980573 ACCTTATACAGAAAGCACAACCA 58.019 39.130 0.00 0.00 0.00 3.67
3513 5590 5.001232 TGACCTTATACAGAAAGCACAACC 58.999 41.667 0.00 0.00 0.00 3.77
3514 5591 5.468746 TGTGACCTTATACAGAAAGCACAAC 59.531 40.000 0.00 0.00 29.63 3.32
3515 5592 5.616270 TGTGACCTTATACAGAAAGCACAA 58.384 37.500 0.00 0.00 29.63 3.33
3516 5593 5.222079 TGTGACCTTATACAGAAAGCACA 57.778 39.130 0.00 0.00 29.88 4.57
3517 5594 5.786401 CTGTGACCTTATACAGAAAGCAC 57.214 43.478 0.00 0.00 45.46 4.40
3524 5601 9.250624 GTTAAGCTATTCTGTGACCTTATACAG 57.749 37.037 0.00 0.00 44.31 2.74
3525 5602 7.919091 CGTTAAGCTATTCTGTGACCTTATACA 59.081 37.037 0.00 0.00 0.00 2.29
3526 5603 7.919621 ACGTTAAGCTATTCTGTGACCTTATAC 59.080 37.037 0.00 0.00 0.00 1.47
3527 5604 8.004087 ACGTTAAGCTATTCTGTGACCTTATA 57.996 34.615 0.00 0.00 0.00 0.98
3528 5605 6.875076 ACGTTAAGCTATTCTGTGACCTTAT 58.125 36.000 0.00 0.00 0.00 1.73
3529 5606 6.276832 ACGTTAAGCTATTCTGTGACCTTA 57.723 37.500 0.00 0.00 0.00 2.69
3633 5712 3.681897 CAGCTGCTTCTACGATTTCTGTT 59.318 43.478 0.00 0.00 0.00 3.16
3670 5749 3.008594 TCCAGACCCGTGTCATAAAATGT 59.991 43.478 0.00 0.00 44.33 2.71
3672 5751 3.517901 TCTCCAGACCCGTGTCATAAAAT 59.482 43.478 0.00 0.00 44.33 1.82
3683 5764 1.208052 ACACATTCATCTCCAGACCCG 59.792 52.381 0.00 0.00 0.00 5.28
3685 5766 5.245531 TGTAAACACATTCATCTCCAGACC 58.754 41.667 0.00 0.00 0.00 3.85
3698 5779 8.076178 GCTGTAGAAAATGACTTGTAAACACAT 58.924 33.333 0.00 0.00 0.00 3.21
3700 5781 7.587757 CAGCTGTAGAAAATGACTTGTAAACAC 59.412 37.037 5.25 0.00 0.00 3.32
3812 5910 4.037565 ACTGTCAATCTGTCGTGTGTCTTA 59.962 41.667 0.00 0.00 0.00 2.10
3829 5927 9.672086 GCTTATAAATTGTTGTGTTTACTGTCA 57.328 29.630 0.00 0.00 0.00 3.58
3830 5928 9.672086 TGCTTATAAATTGTTGTGTTTACTGTC 57.328 29.630 0.00 0.00 0.00 3.51
3938 6063 3.523547 CTCAGCTCACAATTCTCTGAGG 58.476 50.000 4.59 0.00 44.10 3.86
3964 6089 0.842030 AGGGGCAATGTGGAGTGAGA 60.842 55.000 0.00 0.00 0.00 3.27
3973 6098 4.227300 TCTTGTAATAGTCAGGGGCAATGT 59.773 41.667 0.00 0.00 0.00 2.71
4004 6184 1.098050 GCAGCCTCATTGTACCTTGG 58.902 55.000 0.00 0.00 0.00 3.61
4026 6206 3.515502 CAGGGTCTCTCACTGGTCATTTA 59.484 47.826 0.00 0.00 43.35 1.40
4027 6207 2.304180 CAGGGTCTCTCACTGGTCATTT 59.696 50.000 0.00 0.00 43.35 2.32
4035 6215 1.626686 CTCACACAGGGTCTCTCACT 58.373 55.000 0.00 0.00 0.00 3.41
4036 6216 0.037790 GCTCACACAGGGTCTCTCAC 60.038 60.000 0.00 0.00 0.00 3.51
4037 6217 0.178950 AGCTCACACAGGGTCTCTCA 60.179 55.000 0.00 0.00 0.00 3.27
4038 6218 0.246086 CAGCTCACACAGGGTCTCTC 59.754 60.000 0.00 0.00 0.00 3.20
4039 6219 0.178950 TCAGCTCACACAGGGTCTCT 60.179 55.000 0.00 0.00 0.00 3.10
4040 6220 0.037790 GTCAGCTCACACAGGGTCTC 60.038 60.000 0.00 0.00 0.00 3.36
4041 6221 0.760567 TGTCAGCTCACACAGGGTCT 60.761 55.000 0.00 0.00 0.00 3.85
4065 6256 5.864418 AGTGTTGTCTACCACTGACTTTA 57.136 39.130 0.00 0.00 35.63 1.85
4079 6270 4.024302 GCCTGGTAGTTTTGTAGTGTTGTC 60.024 45.833 0.00 0.00 0.00 3.18
4100 6291 2.076100 GTAAAATGCAAGCAAAGGGCC 58.924 47.619 0.00 0.00 46.50 5.80
4104 6295 3.184986 GTGCCTGTAAAATGCAAGCAAAG 59.815 43.478 0.00 0.00 35.42 2.77
4112 6303 2.223923 TGTTGTGGTGCCTGTAAAATGC 60.224 45.455 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.