Multiple sequence alignment - TraesCS6D01G277300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G277300 chr6D 100.000 2712 0 0 1 2712 386161068 386163779 0.000000e+00 5009
1 TraesCS6D01G277300 chr6D 94.421 466 25 1 119 583 400769216 400768751 0.000000e+00 715
2 TraesCS6D01G277300 chr6D 92.979 470 26 5 119 583 110655700 110656167 0.000000e+00 678
3 TraesCS6D01G277300 chr6D 99.153 118 1 0 1 118 30418428 30418545 2.120000e-51 213
4 TraesCS6D01G277300 chr6D 99.153 118 1 0 1 118 403404034 403404151 2.120000e-51 213
5 TraesCS6D01G277300 chr6B 92.534 2076 109 18 639 2709 576812226 576814260 0.000000e+00 2933
6 TraesCS6D01G277300 chr6A 92.965 1393 38 29 582 1938 531000372 531001740 0.000000e+00 1975
7 TraesCS6D01G277300 chr6A 93.779 434 15 4 2027 2452 531001740 531002169 2.280000e-180 641
8 TraesCS6D01G277300 chr6A 94.570 221 9 2 2495 2712 531002170 531002390 3.340000e-89 339
9 TraesCS6D01G277300 chr4D 95.075 467 21 2 119 583 499461407 499461873 0.000000e+00 734
10 TraesCS6D01G277300 chr7D 94.635 466 24 1 119 583 78863955 78864420 0.000000e+00 721
11 TraesCS6D01G277300 chr3A 93.803 468 26 3 119 585 647455199 647454734 0.000000e+00 701
12 TraesCS6D01G277300 chr3A 99.153 118 1 0 1 118 731261210 731261327 2.120000e-51 213
13 TraesCS6D01G277300 chr5D 93.603 469 25 4 119 586 57214329 57213865 0.000000e+00 695
14 TraesCS6D01G277300 chr5D 92.934 467 27 6 119 583 347450627 347450165 0.000000e+00 675
15 TraesCS6D01G277300 chr3D 93.162 468 28 4 119 585 504980630 504981094 0.000000e+00 684
16 TraesCS6D01G277300 chr3D 96.850 127 4 0 1 127 596699590 596699464 2.120000e-51 213
17 TraesCS6D01G277300 chr3D 99.153 118 1 0 1 118 606920814 606920931 2.120000e-51 213
18 TraesCS6D01G277300 chr7A 94.570 442 22 2 147 586 733971012 733970571 0.000000e+00 682
19 TraesCS6D01G277300 chr7A 99.160 119 1 0 1 119 113456452 113456570 5.880000e-52 215
20 TraesCS6D01G277300 chr2B 99.167 120 1 0 1 120 45565157 45565276 1.640000e-52 217
21 TraesCS6D01G277300 chr7B 99.153 118 1 0 1 118 744245433 744245316 2.120000e-51 213
22 TraesCS6D01G277300 chr2D 99.153 118 1 0 1 118 16240680 16240797 2.120000e-51 213


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G277300 chr6D 386161068 386163779 2711 False 5009 5009 100.000000 1 2712 1 chr6D.!!$F3 2711
1 TraesCS6D01G277300 chr6B 576812226 576814260 2034 False 2933 2933 92.534000 639 2709 1 chr6B.!!$F1 2070
2 TraesCS6D01G277300 chr6A 531000372 531002390 2018 False 985 1975 93.771333 582 2712 3 chr6A.!!$F1 2130

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
555 556 0.028374 AAACAGTTTTTAGCGCGCGT 59.972 45.0 32.35 20.0 0.0 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1865 1885 0.551377 TTCCCATGGGGCCTGAACTA 60.551 55.0 30.93 4.76 43.94 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.646736 ATAAGAGGCCAAGGGTACAAC 57.353 47.619 5.01 0.00 0.00 3.32
22 23 0.036306 AAGAGGCCAAGGGTACAACG 59.964 55.000 5.01 0.00 0.00 4.10
23 24 1.125711 AGAGGCCAAGGGTACAACGT 61.126 55.000 5.01 0.00 0.00 3.99
24 25 0.953960 GAGGCCAAGGGTACAACGTG 60.954 60.000 5.01 0.00 0.00 4.49
25 26 1.228033 GGCCAAGGGTACAACGTGT 60.228 57.895 0.00 0.00 0.00 4.49
26 27 1.232621 GGCCAAGGGTACAACGTGTC 61.233 60.000 0.00 0.00 0.00 3.67
27 28 1.232621 GCCAAGGGTACAACGTGTCC 61.233 60.000 0.00 0.00 0.00 4.02
28 29 0.947180 CCAAGGGTACAACGTGTCCG 60.947 60.000 0.00 0.00 40.83 4.79
29 30 0.032403 CAAGGGTACAACGTGTCCGA 59.968 55.000 0.00 0.00 37.88 4.55
30 31 0.032540 AAGGGTACAACGTGTCCGAC 59.967 55.000 0.00 0.00 37.88 4.79
31 32 0.825010 AGGGTACAACGTGTCCGACT 60.825 55.000 0.00 0.00 37.88 4.18
32 33 0.387750 GGGTACAACGTGTCCGACTC 60.388 60.000 0.00 0.00 37.88 3.36
33 34 0.387750 GGTACAACGTGTCCGACTCC 60.388 60.000 0.00 0.00 37.88 3.85
34 35 0.727122 GTACAACGTGTCCGACTCCG 60.727 60.000 0.00 5.01 37.88 4.63
35 36 0.884259 TACAACGTGTCCGACTCCGA 60.884 55.000 15.15 0.00 38.22 4.55
36 37 1.728426 CAACGTGTCCGACTCCGAC 60.728 63.158 15.15 0.00 38.22 4.79
37 38 2.188829 AACGTGTCCGACTCCGACA 61.189 57.895 15.15 0.00 38.22 4.35
38 39 2.126965 CGTGTCCGACTCCGACAC 60.127 66.667 16.44 16.44 40.25 3.67
39 40 2.614446 CGTGTCCGACTCCGACACT 61.614 63.158 21.12 0.00 40.83 3.55
40 41 1.293963 CGTGTCCGACTCCGACACTA 61.294 60.000 21.12 0.00 40.83 2.74
41 42 0.167689 GTGTCCGACTCCGACACTAC 59.832 60.000 18.21 0.00 40.36 2.73
42 43 0.250424 TGTCCGACTCCGACACTACA 60.250 55.000 0.00 0.00 38.22 2.74
43 44 0.877071 GTCCGACTCCGACACTACAA 59.123 55.000 0.00 0.00 38.22 2.41
44 45 1.135746 GTCCGACTCCGACACTACAAG 60.136 57.143 0.00 0.00 38.22 3.16
45 46 0.879765 CCGACTCCGACACTACAAGT 59.120 55.000 0.00 0.00 38.22 3.16
46 47 2.079158 CCGACTCCGACACTACAAGTA 58.921 52.381 0.00 0.00 38.22 2.24
47 48 2.681848 CCGACTCCGACACTACAAGTAT 59.318 50.000 0.00 0.00 38.22 2.12
48 49 3.242673 CCGACTCCGACACTACAAGTATC 60.243 52.174 0.00 0.00 38.22 2.24
49 50 3.242673 CGACTCCGACACTACAAGTATCC 60.243 52.174 0.00 0.00 38.22 2.59
50 51 3.946558 GACTCCGACACTACAAGTATCCT 59.053 47.826 0.00 0.00 0.00 3.24
51 52 5.108187 ACTCCGACACTACAAGTATCCTA 57.892 43.478 0.00 0.00 0.00 2.94
52 53 4.880696 ACTCCGACACTACAAGTATCCTAC 59.119 45.833 0.00 0.00 0.00 3.18
53 54 4.202441 TCCGACACTACAAGTATCCTACC 58.798 47.826 0.00 0.00 0.00 3.18
54 55 3.317430 CCGACACTACAAGTATCCTACCC 59.683 52.174 0.00 0.00 0.00 3.69
55 56 3.949754 CGACACTACAAGTATCCTACCCA 59.050 47.826 0.00 0.00 0.00 4.51
56 57 4.583489 CGACACTACAAGTATCCTACCCAT 59.417 45.833 0.00 0.00 0.00 4.00
57 58 5.766670 CGACACTACAAGTATCCTACCCATA 59.233 44.000 0.00 0.00 0.00 2.74
58 59 6.293845 CGACACTACAAGTATCCTACCCATAC 60.294 46.154 0.00 0.00 0.00 2.39
59 60 6.680540 ACACTACAAGTATCCTACCCATACT 58.319 40.000 0.00 0.00 38.48 2.12
60 61 7.819500 ACACTACAAGTATCCTACCCATACTA 58.180 38.462 0.00 0.00 36.26 1.82
61 62 7.723172 ACACTACAAGTATCCTACCCATACTAC 59.277 40.741 0.00 0.00 36.26 2.73
62 63 7.722728 CACTACAAGTATCCTACCCATACTACA 59.277 40.741 0.00 0.00 36.26 2.74
63 64 8.284435 ACTACAAGTATCCTACCCATACTACAA 58.716 37.037 0.00 0.00 36.26 2.41
64 65 7.357429 ACAAGTATCCTACCCATACTACAAC 57.643 40.000 0.00 0.00 36.26 3.32
65 66 6.899075 ACAAGTATCCTACCCATACTACAACA 59.101 38.462 0.00 0.00 36.26 3.33
66 67 6.973460 AGTATCCTACCCATACTACAACAC 57.027 41.667 0.00 0.00 35.65 3.32
67 68 5.837438 AGTATCCTACCCATACTACAACACC 59.163 44.000 0.00 0.00 35.65 4.16
68 69 4.063851 TCCTACCCATACTACAACACCA 57.936 45.455 0.00 0.00 0.00 4.17
69 70 4.427637 TCCTACCCATACTACAACACCAA 58.572 43.478 0.00 0.00 0.00 3.67
70 71 4.468510 TCCTACCCATACTACAACACCAAG 59.531 45.833 0.00 0.00 0.00 3.61
71 72 4.224370 CCTACCCATACTACAACACCAAGT 59.776 45.833 0.00 0.00 0.00 3.16
72 73 4.281898 ACCCATACTACAACACCAAGTC 57.718 45.455 0.00 0.00 0.00 3.01
73 74 3.008704 ACCCATACTACAACACCAAGTCC 59.991 47.826 0.00 0.00 0.00 3.85
74 75 3.008594 CCCATACTACAACACCAAGTCCA 59.991 47.826 0.00 0.00 0.00 4.02
75 76 4.505918 CCCATACTACAACACCAAGTCCAA 60.506 45.833 0.00 0.00 0.00 3.53
76 77 4.695455 CCATACTACAACACCAAGTCCAAG 59.305 45.833 0.00 0.00 0.00 3.61
77 78 2.572290 ACTACAACACCAAGTCCAAGC 58.428 47.619 0.00 0.00 0.00 4.01
78 79 1.531149 CTACAACACCAAGTCCAAGCG 59.469 52.381 0.00 0.00 0.00 4.68
79 80 0.393808 ACAACACCAAGTCCAAGCGT 60.394 50.000 0.00 0.00 0.00 5.07
80 81 1.134340 ACAACACCAAGTCCAAGCGTA 60.134 47.619 0.00 0.00 0.00 4.42
81 82 1.944024 CAACACCAAGTCCAAGCGTAA 59.056 47.619 0.00 0.00 0.00 3.18
82 83 1.589803 ACACCAAGTCCAAGCGTAAC 58.410 50.000 0.00 0.00 0.00 2.50
83 84 0.872388 CACCAAGTCCAAGCGTAACC 59.128 55.000 0.00 0.00 0.00 2.85
84 85 0.250597 ACCAAGTCCAAGCGTAACCC 60.251 55.000 0.00 0.00 0.00 4.11
85 86 0.250553 CCAAGTCCAAGCGTAACCCA 60.251 55.000 0.00 0.00 0.00 4.51
86 87 1.600023 CAAGTCCAAGCGTAACCCAA 58.400 50.000 0.00 0.00 0.00 4.12
87 88 1.265905 CAAGTCCAAGCGTAACCCAAC 59.734 52.381 0.00 0.00 0.00 3.77
88 89 0.763035 AGTCCAAGCGTAACCCAACT 59.237 50.000 0.00 0.00 0.00 3.16
89 90 1.972795 AGTCCAAGCGTAACCCAACTA 59.027 47.619 0.00 0.00 0.00 2.24
90 91 2.028385 AGTCCAAGCGTAACCCAACTAG 60.028 50.000 0.00 0.00 0.00 2.57
91 92 1.972795 TCCAAGCGTAACCCAACTAGT 59.027 47.619 0.00 0.00 0.00 2.57
92 93 3.056607 GTCCAAGCGTAACCCAACTAGTA 60.057 47.826 0.00 0.00 0.00 1.82
93 94 3.056607 TCCAAGCGTAACCCAACTAGTAC 60.057 47.826 0.00 0.00 0.00 2.73
94 95 3.306225 CCAAGCGTAACCCAACTAGTACA 60.306 47.826 0.00 0.00 0.00 2.90
95 96 4.309099 CAAGCGTAACCCAACTAGTACAA 58.691 43.478 0.00 0.00 0.00 2.41
96 97 4.605640 AGCGTAACCCAACTAGTACAAA 57.394 40.909 0.00 0.00 0.00 2.83
97 98 4.959723 AGCGTAACCCAACTAGTACAAAA 58.040 39.130 0.00 0.00 0.00 2.44
98 99 5.554070 AGCGTAACCCAACTAGTACAAAAT 58.446 37.500 0.00 0.00 0.00 1.82
99 100 6.700352 AGCGTAACCCAACTAGTACAAAATA 58.300 36.000 0.00 0.00 0.00 1.40
100 101 7.333323 AGCGTAACCCAACTAGTACAAAATAT 58.667 34.615 0.00 0.00 0.00 1.28
101 102 7.825761 AGCGTAACCCAACTAGTACAAAATATT 59.174 33.333 0.00 0.00 0.00 1.28
102 103 8.118607 GCGTAACCCAACTAGTACAAAATATTC 58.881 37.037 0.00 0.00 0.00 1.75
103 104 8.323140 CGTAACCCAACTAGTACAAAATATTCG 58.677 37.037 0.00 0.00 0.00 3.34
104 105 9.369904 GTAACCCAACTAGTACAAAATATTCGA 57.630 33.333 0.00 0.00 0.00 3.71
105 106 7.838771 ACCCAACTAGTACAAAATATTCGAC 57.161 36.000 0.00 0.00 0.00 4.20
106 107 7.388437 ACCCAACTAGTACAAAATATTCGACA 58.612 34.615 0.00 0.00 0.00 4.35
107 108 7.332678 ACCCAACTAGTACAAAATATTCGACAC 59.667 37.037 0.00 0.00 0.00 3.67
108 109 7.332430 CCCAACTAGTACAAAATATTCGACACA 59.668 37.037 0.00 0.00 0.00 3.72
109 110 8.714179 CCAACTAGTACAAAATATTCGACACAA 58.286 33.333 0.00 0.00 0.00 3.33
112 113 9.263538 ACTAGTACAAAATATTCGACACAAACA 57.736 29.630 0.00 0.00 0.00 2.83
113 114 9.525007 CTAGTACAAAATATTCGACACAAACAC 57.475 33.333 0.00 0.00 0.00 3.32
114 115 7.921787 AGTACAAAATATTCGACACAAACACA 58.078 30.769 0.00 0.00 0.00 3.72
115 116 8.399425 AGTACAAAATATTCGACACAAACACAA 58.601 29.630 0.00 0.00 0.00 3.33
116 117 7.444558 ACAAAATATTCGACACAAACACAAC 57.555 32.000 0.00 0.00 0.00 3.32
117 118 7.030165 ACAAAATATTCGACACAAACACAACA 58.970 30.769 0.00 0.00 0.00 3.33
118 119 7.704472 ACAAAATATTCGACACAAACACAACAT 59.296 29.630 0.00 0.00 0.00 2.71
119 120 8.538856 CAAAATATTCGACACAAACACAACATT 58.461 29.630 0.00 0.00 0.00 2.71
120 121 7.621832 AATATTCGACACAAACACAACATTG 57.378 32.000 0.00 0.00 0.00 2.82
121 122 3.412981 TCGACACAAACACAACATTGG 57.587 42.857 0.00 0.00 0.00 3.16
122 123 2.098280 TCGACACAAACACAACATTGGG 59.902 45.455 0.00 0.00 36.04 4.12
123 124 2.098280 CGACACAAACACAACATTGGGA 59.902 45.455 0.00 0.00 34.09 4.37
124 125 3.443976 GACACAAACACAACATTGGGAC 58.556 45.455 0.00 0.00 34.09 4.46
125 126 2.828520 ACACAAACACAACATTGGGACA 59.171 40.909 0.00 0.00 34.09 4.02
126 127 3.450457 ACACAAACACAACATTGGGACAT 59.550 39.130 0.00 0.00 39.30 3.06
127 128 4.050553 CACAAACACAACATTGGGACATC 58.949 43.478 0.00 0.00 39.30 3.06
128 129 3.069443 ACAAACACAACATTGGGACATCC 59.931 43.478 0.00 0.00 39.30 3.51
138 139 2.509336 GGACATCCCGTGCGAGTG 60.509 66.667 0.00 0.00 0.00 3.51
139 140 3.188786 GACATCCCGTGCGAGTGC 61.189 66.667 0.00 0.00 43.20 4.40
151 152 4.803426 GAGTGCGACGGAGGGCTG 62.803 72.222 0.00 0.00 32.35 4.85
153 154 4.373116 GTGCGACGGAGGGCTGAA 62.373 66.667 0.00 0.00 32.35 3.02
154 155 3.621805 TGCGACGGAGGGCTGAAA 61.622 61.111 0.00 0.00 32.35 2.69
155 156 2.815647 GCGACGGAGGGCTGAAAG 60.816 66.667 0.00 0.00 0.00 2.62
156 157 2.125512 CGACGGAGGGCTGAAAGG 60.126 66.667 0.00 0.00 0.00 3.11
157 158 2.269241 GACGGAGGGCTGAAAGGG 59.731 66.667 0.00 0.00 0.00 3.95
158 159 2.529389 ACGGAGGGCTGAAAGGGT 60.529 61.111 0.00 0.00 0.00 4.34
159 160 2.045926 CGGAGGGCTGAAAGGGTG 60.046 66.667 0.00 0.00 0.00 4.61
160 161 2.356667 GGAGGGCTGAAAGGGTGG 59.643 66.667 0.00 0.00 0.00 4.61
161 162 2.361737 GAGGGCTGAAAGGGTGGC 60.362 66.667 0.00 0.00 0.00 5.01
162 163 3.946126 GAGGGCTGAAAGGGTGGCC 62.946 68.421 0.00 0.00 45.34 5.36
172 173 2.419620 GGGTGGCCCGTTTTGTTG 59.580 61.111 0.00 0.00 32.13 3.33
173 174 2.279851 GGTGGCCCGTTTTGTTGC 60.280 61.111 0.00 0.00 0.00 4.17
174 175 2.279851 GTGGCCCGTTTTGTTGCC 60.280 61.111 0.00 0.00 44.27 4.52
175 176 2.443016 TGGCCCGTTTTGTTGCCT 60.443 55.556 0.00 0.00 44.32 4.75
176 177 2.338620 GGCCCGTTTTGTTGCCTC 59.661 61.111 0.00 0.00 40.77 4.70
177 178 2.338620 GCCCGTTTTGTTGCCTCC 59.661 61.111 0.00 0.00 0.00 4.30
178 179 2.200337 GCCCGTTTTGTTGCCTCCT 61.200 57.895 0.00 0.00 0.00 3.69
179 180 0.891904 GCCCGTTTTGTTGCCTCCTA 60.892 55.000 0.00 0.00 0.00 2.94
180 181 1.834188 CCCGTTTTGTTGCCTCCTAT 58.166 50.000 0.00 0.00 0.00 2.57
181 182 1.743394 CCCGTTTTGTTGCCTCCTATC 59.257 52.381 0.00 0.00 0.00 2.08
182 183 2.432444 CCGTTTTGTTGCCTCCTATCA 58.568 47.619 0.00 0.00 0.00 2.15
183 184 3.016736 CCGTTTTGTTGCCTCCTATCAT 58.983 45.455 0.00 0.00 0.00 2.45
184 185 3.181497 CCGTTTTGTTGCCTCCTATCATG 60.181 47.826 0.00 0.00 0.00 3.07
185 186 3.731867 CGTTTTGTTGCCTCCTATCATGC 60.732 47.826 0.00 0.00 0.00 4.06
186 187 2.057137 TTGTTGCCTCCTATCATGCC 57.943 50.000 0.00 0.00 0.00 4.40
187 188 0.918258 TGTTGCCTCCTATCATGCCA 59.082 50.000 0.00 0.00 0.00 4.92
188 189 1.496001 TGTTGCCTCCTATCATGCCAT 59.504 47.619 0.00 0.00 0.00 4.40
189 190 2.091720 TGTTGCCTCCTATCATGCCATT 60.092 45.455 0.00 0.00 0.00 3.16
190 191 2.555757 GTTGCCTCCTATCATGCCATTC 59.444 50.000 0.00 0.00 0.00 2.67
191 192 1.271001 TGCCTCCTATCATGCCATTCG 60.271 52.381 0.00 0.00 0.00 3.34
192 193 1.002430 GCCTCCTATCATGCCATTCGA 59.998 52.381 0.00 0.00 0.00 3.71
193 194 2.693069 CCTCCTATCATGCCATTCGAC 58.307 52.381 0.00 0.00 0.00 4.20
194 195 2.332104 CTCCTATCATGCCATTCGACG 58.668 52.381 0.00 0.00 0.00 5.12
195 196 1.686587 TCCTATCATGCCATTCGACGT 59.313 47.619 0.00 0.00 0.00 4.34
196 197 2.061773 CCTATCATGCCATTCGACGTC 58.938 52.381 5.18 5.18 0.00 4.34
197 198 2.061773 CTATCATGCCATTCGACGTCC 58.938 52.381 10.58 0.00 0.00 4.79
198 199 0.532862 ATCATGCCATTCGACGTCCC 60.533 55.000 10.58 0.00 0.00 4.46
199 200 2.202878 ATGCCATTCGACGTCCCG 60.203 61.111 10.58 0.00 0.00 5.14
202 203 2.885644 CCATTCGACGTCCCGCAG 60.886 66.667 10.58 0.00 0.00 5.18
203 204 3.554692 CATTCGACGTCCCGCAGC 61.555 66.667 10.58 0.00 0.00 5.25
208 209 4.865761 GACGTCCCGCAGCGCATA 62.866 66.667 11.47 0.00 0.00 3.14
209 210 4.444838 ACGTCCCGCAGCGCATAA 62.445 61.111 11.47 0.00 0.00 1.90
210 211 2.967076 CGTCCCGCAGCGCATAAT 60.967 61.111 11.47 0.00 0.00 1.28
211 212 2.633657 GTCCCGCAGCGCATAATG 59.366 61.111 11.47 0.00 0.00 1.90
212 213 1.887242 GTCCCGCAGCGCATAATGA 60.887 57.895 11.47 0.00 0.00 2.57
213 214 1.071299 TCCCGCAGCGCATAATGAT 59.929 52.632 11.47 0.00 0.00 2.45
214 215 0.950555 TCCCGCAGCGCATAATGATC 60.951 55.000 11.47 0.00 0.00 2.92
215 216 0.952497 CCCGCAGCGCATAATGATCT 60.952 55.000 11.47 0.00 0.00 2.75
216 217 0.870393 CCGCAGCGCATAATGATCTT 59.130 50.000 11.47 0.00 0.00 2.40
217 218 1.136141 CCGCAGCGCATAATGATCTTC 60.136 52.381 11.47 0.00 0.00 2.87
218 219 1.528161 CGCAGCGCATAATGATCTTCA 59.472 47.619 11.47 0.00 0.00 3.02
219 220 2.411160 CGCAGCGCATAATGATCTTCAG 60.411 50.000 11.47 0.00 0.00 3.02
220 221 2.804527 GCAGCGCATAATGATCTTCAGA 59.195 45.455 11.47 0.00 0.00 3.27
221 222 3.249320 GCAGCGCATAATGATCTTCAGAA 59.751 43.478 11.47 0.00 0.00 3.02
222 223 4.610905 GCAGCGCATAATGATCTTCAGAAG 60.611 45.833 11.47 3.45 0.00 2.85
223 224 4.063689 AGCGCATAATGATCTTCAGAAGG 58.936 43.478 11.47 0.00 0.00 3.46
224 225 4.060900 GCGCATAATGATCTTCAGAAGGA 58.939 43.478 10.42 0.00 0.00 3.36
225 226 4.694509 GCGCATAATGATCTTCAGAAGGAT 59.305 41.667 10.42 2.93 0.00 3.24
226 227 5.163874 GCGCATAATGATCTTCAGAAGGATC 60.164 44.000 10.42 11.61 38.87 3.36
227 228 6.164876 CGCATAATGATCTTCAGAAGGATCT 58.835 40.000 10.42 1.44 39.09 2.75
228 229 6.310956 CGCATAATGATCTTCAGAAGGATCTC 59.689 42.308 10.42 3.74 39.09 2.75
229 230 7.160049 GCATAATGATCTTCAGAAGGATCTCA 58.840 38.462 10.42 8.71 39.09 3.27
230 231 7.825270 GCATAATGATCTTCAGAAGGATCTCAT 59.175 37.037 10.42 10.35 39.09 2.90
231 232 9.727859 CATAATGATCTTCAGAAGGATCTCATT 57.272 33.333 21.59 21.59 39.09 2.57
232 233 9.727859 ATAATGATCTTCAGAAGGATCTCATTG 57.272 33.333 23.85 0.00 39.09 2.82
233 234 6.803366 TGATCTTCAGAAGGATCTCATTGA 57.197 37.500 10.42 0.00 39.09 2.57
234 235 6.818233 TGATCTTCAGAAGGATCTCATTGAG 58.182 40.000 10.42 7.38 39.09 3.02
235 236 5.611128 TCTTCAGAAGGATCTCATTGAGG 57.389 43.478 13.59 0.00 32.03 3.86
236 237 5.275630 TCTTCAGAAGGATCTCATTGAGGA 58.724 41.667 13.59 1.54 32.03 3.71
237 238 5.363292 TCTTCAGAAGGATCTCATTGAGGAG 59.637 44.000 13.59 0.00 32.03 3.69
238 239 4.618635 TCAGAAGGATCTCATTGAGGAGT 58.381 43.478 13.59 0.83 36.30 3.85
239 240 4.405036 TCAGAAGGATCTCATTGAGGAGTG 59.595 45.833 13.59 3.15 36.30 3.51
240 241 3.710677 AGAAGGATCTCATTGAGGAGTGG 59.289 47.826 13.59 0.00 36.30 4.00
241 242 3.127791 AGGATCTCATTGAGGAGTGGT 57.872 47.619 13.59 0.00 36.30 4.16
242 243 2.770802 AGGATCTCATTGAGGAGTGGTG 59.229 50.000 13.59 0.00 36.30 4.17
243 244 2.158842 GGATCTCATTGAGGAGTGGTGG 60.159 54.545 13.59 0.00 36.30 4.61
244 245 1.279496 TCTCATTGAGGAGTGGTGGG 58.721 55.000 13.59 0.00 36.30 4.61
245 246 0.393537 CTCATTGAGGAGTGGTGGGC 60.394 60.000 5.73 0.00 0.00 5.36
246 247 1.133181 TCATTGAGGAGTGGTGGGCA 61.133 55.000 0.00 0.00 0.00 5.36
247 248 0.033796 CATTGAGGAGTGGTGGGCAT 60.034 55.000 0.00 0.00 0.00 4.40
248 249 0.033796 ATTGAGGAGTGGTGGGCATG 60.034 55.000 0.00 0.00 0.00 4.06
249 250 2.141011 TTGAGGAGTGGTGGGCATGG 62.141 60.000 0.00 0.00 0.00 3.66
250 251 2.204136 AGGAGTGGTGGGCATGGA 60.204 61.111 0.00 0.00 0.00 3.41
251 252 1.852157 AGGAGTGGTGGGCATGGAA 60.852 57.895 0.00 0.00 0.00 3.53
252 253 1.217057 AGGAGTGGTGGGCATGGAAT 61.217 55.000 0.00 0.00 0.00 3.01
254 255 1.000739 AGTGGTGGGCATGGAATGG 59.999 57.895 0.00 0.00 46.86 3.16
255 256 1.000233 GTGGTGGGCATGGAATGGA 60.000 57.895 0.00 0.00 46.86 3.41
256 257 1.000233 TGGTGGGCATGGAATGGAC 60.000 57.895 0.00 0.00 46.86 4.02
257 258 2.120909 GGTGGGCATGGAATGGACG 61.121 63.158 0.00 0.00 46.86 4.79
258 259 1.077787 GTGGGCATGGAATGGACGA 60.078 57.895 0.00 0.00 46.86 4.20
259 260 1.077787 TGGGCATGGAATGGACGAC 60.078 57.895 0.00 0.00 46.86 4.34
260 261 1.077787 GGGCATGGAATGGACGACA 60.078 57.895 0.00 0.00 46.86 4.35
261 262 0.679640 GGGCATGGAATGGACGACAA 60.680 55.000 0.00 0.00 46.86 3.18
262 263 1.173043 GGCATGGAATGGACGACAAA 58.827 50.000 0.00 0.00 46.86 2.83
263 264 1.133025 GGCATGGAATGGACGACAAAG 59.867 52.381 0.00 0.00 46.86 2.77
264 265 2.083774 GCATGGAATGGACGACAAAGA 58.916 47.619 0.00 0.00 46.86 2.52
265 266 2.096496 GCATGGAATGGACGACAAAGAG 59.904 50.000 0.00 0.00 46.86 2.85
266 267 1.808411 TGGAATGGACGACAAAGAGC 58.192 50.000 0.00 0.00 0.00 4.09
267 268 1.071542 TGGAATGGACGACAAAGAGCA 59.928 47.619 0.00 0.00 0.00 4.26
268 269 2.290260 TGGAATGGACGACAAAGAGCAT 60.290 45.455 0.00 0.00 0.00 3.79
269 270 2.352960 GGAATGGACGACAAAGAGCATC 59.647 50.000 0.00 0.00 0.00 3.91
270 271 2.768253 ATGGACGACAAAGAGCATCA 57.232 45.000 0.00 0.00 37.82 3.07
271 272 2.768253 TGGACGACAAAGAGCATCAT 57.232 45.000 0.00 0.00 37.82 2.45
272 273 2.349590 TGGACGACAAAGAGCATCATG 58.650 47.619 0.00 0.00 37.82 3.07
273 274 2.028203 TGGACGACAAAGAGCATCATGA 60.028 45.455 0.00 0.00 37.82 3.07
274 275 3.201290 GGACGACAAAGAGCATCATGAT 58.799 45.455 1.18 1.18 37.82 2.45
275 276 3.624861 GGACGACAAAGAGCATCATGATT 59.375 43.478 5.16 0.00 37.82 2.57
276 277 4.095483 GGACGACAAAGAGCATCATGATTT 59.905 41.667 5.16 0.00 37.82 2.17
277 278 4.978186 ACGACAAAGAGCATCATGATTTG 58.022 39.130 5.16 10.98 37.82 2.32
278 279 4.456911 ACGACAAAGAGCATCATGATTTGT 59.543 37.500 19.33 19.33 44.39 2.83
279 280 4.791676 CGACAAAGAGCATCATGATTTGTG 59.208 41.667 22.63 13.89 42.44 3.33
280 281 4.491676 ACAAAGAGCATCATGATTTGTGC 58.508 39.130 18.81 15.05 41.25 4.57
281 282 3.416119 AAGAGCATCATGATTTGTGCG 57.584 42.857 5.16 0.00 37.41 5.34
282 283 2.362736 AGAGCATCATGATTTGTGCGT 58.637 42.857 5.16 0.00 37.41 5.24
283 284 2.751259 AGAGCATCATGATTTGTGCGTT 59.249 40.909 5.16 0.00 37.41 4.84
284 285 3.103738 GAGCATCATGATTTGTGCGTTC 58.896 45.455 5.16 0.00 37.41 3.95
285 286 1.841944 GCATCATGATTTGTGCGTTCG 59.158 47.619 5.16 0.00 0.00 3.95
286 287 2.476018 GCATCATGATTTGTGCGTTCGA 60.476 45.455 5.16 0.00 0.00 3.71
287 288 3.789791 GCATCATGATTTGTGCGTTCGAT 60.790 43.478 5.16 0.00 0.00 3.59
288 289 4.552572 GCATCATGATTTGTGCGTTCGATA 60.553 41.667 5.16 0.00 0.00 2.92
289 290 5.682869 CATCATGATTTGTGCGTTCGATAT 58.317 37.500 5.16 0.00 0.00 1.63
290 291 5.733226 TCATGATTTGTGCGTTCGATATT 57.267 34.783 0.00 0.00 0.00 1.28
291 292 5.500825 TCATGATTTGTGCGTTCGATATTG 58.499 37.500 0.00 0.00 0.00 1.90
292 293 4.937696 TGATTTGTGCGTTCGATATTGT 57.062 36.364 0.00 0.00 0.00 2.71
293 294 6.256757 TCATGATTTGTGCGTTCGATATTGTA 59.743 34.615 0.00 0.00 0.00 2.41
294 295 6.597262 TGATTTGTGCGTTCGATATTGTAT 57.403 33.333 0.00 0.00 0.00 2.29
295 296 7.010697 TGATTTGTGCGTTCGATATTGTATT 57.989 32.000 0.00 0.00 0.00 1.89
296 297 6.904543 TGATTTGTGCGTTCGATATTGTATTG 59.095 34.615 0.00 0.00 0.00 1.90
297 298 5.788055 TTGTGCGTTCGATATTGTATTGT 57.212 34.783 0.00 0.00 0.00 2.71
298 299 5.788055 TGTGCGTTCGATATTGTATTGTT 57.212 34.783 0.00 0.00 0.00 2.83
299 300 5.555552 TGTGCGTTCGATATTGTATTGTTG 58.444 37.500 0.00 0.00 0.00 3.33
300 301 5.348997 TGTGCGTTCGATATTGTATTGTTGA 59.651 36.000 0.00 0.00 0.00 3.18
301 302 6.128526 TGTGCGTTCGATATTGTATTGTTGAA 60.129 34.615 0.00 0.00 0.00 2.69
302 303 6.192137 GTGCGTTCGATATTGTATTGTTGAAC 59.808 38.462 0.00 0.00 33.59 3.18
303 304 6.091577 TGCGTTCGATATTGTATTGTTGAACT 59.908 34.615 0.00 0.00 34.37 3.01
304 305 6.408039 GCGTTCGATATTGTATTGTTGAACTG 59.592 38.462 0.00 0.00 34.37 3.16
305 306 7.453034 CGTTCGATATTGTATTGTTGAACTGT 58.547 34.615 0.00 0.00 34.37 3.55
306 307 7.955324 CGTTCGATATTGTATTGTTGAACTGTT 59.045 33.333 0.00 0.00 34.37 3.16
307 308 9.607285 GTTCGATATTGTATTGTTGAACTGTTT 57.393 29.630 0.00 0.00 33.95 2.83
308 309 9.605955 TTCGATATTGTATTGTTGAACTGTTTG 57.394 29.630 0.00 0.00 0.00 2.93
309 310 8.779303 TCGATATTGTATTGTTGAACTGTTTGT 58.221 29.630 0.00 0.00 0.00 2.83
310 311 9.393249 CGATATTGTATTGTTGAACTGTTTGTT 57.607 29.630 0.00 0.00 42.38 2.83
313 314 7.573916 TTGTATTGTTGAACTGTTTGTTGTG 57.426 32.000 0.00 0.00 39.30 3.33
314 315 6.682746 TGTATTGTTGAACTGTTTGTTGTGT 58.317 32.000 0.00 0.00 39.30 3.72
315 316 7.148641 TGTATTGTTGAACTGTTTGTTGTGTT 58.851 30.769 0.00 0.00 39.30 3.32
316 317 7.653713 TGTATTGTTGAACTGTTTGTTGTGTTT 59.346 29.630 0.00 0.00 39.30 2.83
317 318 9.130312 GTATTGTTGAACTGTTTGTTGTGTTTA 57.870 29.630 0.00 0.00 39.30 2.01
318 319 8.770438 ATTGTTGAACTGTTTGTTGTGTTTAT 57.230 26.923 0.00 0.00 39.30 1.40
319 320 8.594881 TTGTTGAACTGTTTGTTGTGTTTATT 57.405 26.923 0.00 0.00 39.30 1.40
320 321 8.012151 TGTTGAACTGTTTGTTGTGTTTATTG 57.988 30.769 0.00 0.00 39.30 1.90
321 322 6.639671 TGAACTGTTTGTTGTGTTTATTGC 57.360 33.333 0.00 0.00 39.30 3.56
322 323 6.159293 TGAACTGTTTGTTGTGTTTATTGCA 58.841 32.000 0.00 0.00 39.30 4.08
323 324 6.090088 TGAACTGTTTGTTGTGTTTATTGCAC 59.910 34.615 0.00 0.00 39.30 4.57
324 325 5.719173 ACTGTTTGTTGTGTTTATTGCACT 58.281 33.333 0.00 0.00 37.70 4.40
325 326 6.857956 ACTGTTTGTTGTGTTTATTGCACTA 58.142 32.000 0.00 0.00 37.70 2.74
326 327 7.488322 ACTGTTTGTTGTGTTTATTGCACTAT 58.512 30.769 0.00 0.00 37.70 2.12
327 328 7.978975 ACTGTTTGTTGTGTTTATTGCACTATT 59.021 29.630 0.00 0.00 37.70 1.73
328 329 8.709386 TGTTTGTTGTGTTTATTGCACTATTT 57.291 26.923 0.00 0.00 37.70 1.40
329 330 8.598924 TGTTTGTTGTGTTTATTGCACTATTTG 58.401 29.630 0.00 0.00 37.70 2.32
330 331 8.599774 GTTTGTTGTGTTTATTGCACTATTTGT 58.400 29.630 0.00 0.00 37.70 2.83
331 332 8.709386 TTGTTGTGTTTATTGCACTATTTGTT 57.291 26.923 0.00 0.00 37.70 2.83
332 333 8.124586 TGTTGTGTTTATTGCACTATTTGTTG 57.875 30.769 0.00 0.00 37.70 3.33
333 334 7.761704 TGTTGTGTTTATTGCACTATTTGTTGT 59.238 29.630 0.00 0.00 37.70 3.32
334 335 9.239002 GTTGTGTTTATTGCACTATTTGTTGTA 57.761 29.630 0.00 0.00 37.70 2.41
335 336 9.973450 TTGTGTTTATTGCACTATTTGTTGTAT 57.027 25.926 0.00 0.00 37.70 2.29
336 337 9.973450 TGTGTTTATTGCACTATTTGTTGTATT 57.027 25.926 0.00 0.00 37.70 1.89
341 342 7.795431 ATTGCACTATTTGTTGTATTGAACG 57.205 32.000 0.00 0.00 0.00 3.95
342 343 6.546972 TGCACTATTTGTTGTATTGAACGA 57.453 33.333 0.00 0.00 0.00 3.85
343 344 7.139896 TGCACTATTTGTTGTATTGAACGAT 57.860 32.000 0.00 0.00 0.00 3.73
344 345 8.257830 TGCACTATTTGTTGTATTGAACGATA 57.742 30.769 0.00 0.00 0.00 2.92
345 346 8.722394 TGCACTATTTGTTGTATTGAACGATAA 58.278 29.630 0.00 0.00 0.00 1.75
346 347 9.549509 GCACTATTTGTTGTATTGAACGATAAA 57.450 29.630 0.00 0.00 37.10 1.40
351 352 9.959749 ATTTGTTGTATTGAACGATAAACTGTT 57.040 25.926 0.00 0.00 35.95 3.16
352 353 9.790389 TTTGTTGTATTGAACGATAAACTGTTT 57.210 25.926 10.98 10.98 30.11 2.83
353 354 8.775220 TGTTGTATTGAACGATAAACTGTTTG 57.225 30.769 15.69 2.05 0.00 2.93
354 355 8.399425 TGTTGTATTGAACGATAAACTGTTTGT 58.601 29.630 15.69 9.16 0.00 2.83
355 356 9.228636 GTTGTATTGAACGATAAACTGTTTGTT 57.771 29.630 15.69 10.93 41.29 2.83
370 371 8.609478 AACTGTTTGTTTGAGTTGTAATAACG 57.391 30.769 0.00 0.00 34.84 3.18
371 372 7.976826 ACTGTTTGTTTGAGTTGTAATAACGA 58.023 30.769 0.00 0.00 0.00 3.85
372 373 8.452534 ACTGTTTGTTTGAGTTGTAATAACGAA 58.547 29.630 0.00 0.00 0.00 3.85
373 374 9.279904 CTGTTTGTTTGAGTTGTAATAACGAAA 57.720 29.630 0.00 0.00 0.00 3.46
374 375 9.790389 TGTTTGTTTGAGTTGTAATAACGAAAT 57.210 25.926 0.00 0.00 0.00 2.17
425 426 9.598517 TTATTTGTGTTTGATCTTTTTGCTTCT 57.401 25.926 0.00 0.00 0.00 2.85
426 427 6.890663 TTGTGTTTGATCTTTTTGCTTCTG 57.109 33.333 0.00 0.00 0.00 3.02
427 428 5.964758 TGTGTTTGATCTTTTTGCTTCTGT 58.035 33.333 0.00 0.00 0.00 3.41
428 429 6.397272 TGTGTTTGATCTTTTTGCTTCTGTT 58.603 32.000 0.00 0.00 0.00 3.16
429 430 6.873076 TGTGTTTGATCTTTTTGCTTCTGTTT 59.127 30.769 0.00 0.00 0.00 2.83
430 431 7.387397 TGTGTTTGATCTTTTTGCTTCTGTTTT 59.613 29.630 0.00 0.00 0.00 2.43
431 432 7.689400 GTGTTTGATCTTTTTGCTTCTGTTTTG 59.311 33.333 0.00 0.00 0.00 2.44
432 433 6.907206 TTGATCTTTTTGCTTCTGTTTTGG 57.093 33.333 0.00 0.00 0.00 3.28
433 434 6.219417 TGATCTTTTTGCTTCTGTTTTGGA 57.781 33.333 0.00 0.00 0.00 3.53
434 435 6.638610 TGATCTTTTTGCTTCTGTTTTGGAA 58.361 32.000 0.00 0.00 0.00 3.53
435 436 7.274447 TGATCTTTTTGCTTCTGTTTTGGAAT 58.726 30.769 0.00 0.00 0.00 3.01
436 437 6.907206 TCTTTTTGCTTCTGTTTTGGAATG 57.093 33.333 0.00 0.00 0.00 2.67
437 438 5.294060 TCTTTTTGCTTCTGTTTTGGAATGC 59.706 36.000 0.00 0.00 0.00 3.56
438 439 3.815856 TTGCTTCTGTTTTGGAATGCA 57.184 38.095 0.00 0.00 0.00 3.96
439 440 4.339872 TTGCTTCTGTTTTGGAATGCAT 57.660 36.364 0.00 0.00 32.04 3.96
440 441 5.465532 TTGCTTCTGTTTTGGAATGCATA 57.534 34.783 0.00 0.00 32.04 3.14
441 442 5.664294 TGCTTCTGTTTTGGAATGCATAT 57.336 34.783 0.00 0.00 0.00 1.78
442 443 5.412640 TGCTTCTGTTTTGGAATGCATATG 58.587 37.500 0.00 0.00 0.00 1.78
443 444 5.047164 TGCTTCTGTTTTGGAATGCATATGT 60.047 36.000 0.00 0.00 0.00 2.29
444 445 5.870978 GCTTCTGTTTTGGAATGCATATGTT 59.129 36.000 0.00 0.00 0.00 2.71
445 446 6.183360 GCTTCTGTTTTGGAATGCATATGTTG 60.183 38.462 0.00 0.00 0.00 3.33
446 447 6.343716 TCTGTTTTGGAATGCATATGTTGT 57.656 33.333 0.00 0.00 0.00 3.32
447 448 6.757237 TCTGTTTTGGAATGCATATGTTGTT 58.243 32.000 0.00 0.00 0.00 2.83
448 449 7.215789 TCTGTTTTGGAATGCATATGTTGTTT 58.784 30.769 0.00 0.00 0.00 2.83
449 450 7.171167 TCTGTTTTGGAATGCATATGTTGTTTG 59.829 33.333 0.00 0.00 0.00 2.93
450 451 6.765036 TGTTTTGGAATGCATATGTTGTTTGT 59.235 30.769 0.00 0.00 0.00 2.83
451 452 6.782298 TTTGGAATGCATATGTTGTTTGTG 57.218 33.333 0.00 0.00 0.00 3.33
452 453 4.244066 TGGAATGCATATGTTGTTTGTGC 58.756 39.130 0.00 0.00 36.39 4.57
453 454 3.304026 GGAATGCATATGTTGTTTGTGCG 59.696 43.478 0.00 0.00 38.58 5.34
454 455 3.846423 ATGCATATGTTGTTTGTGCGA 57.154 38.095 0.00 0.00 38.58 5.10
455 456 3.200294 TGCATATGTTGTTTGTGCGAG 57.800 42.857 4.29 0.00 38.58 5.03
456 457 2.810852 TGCATATGTTGTTTGTGCGAGA 59.189 40.909 4.29 0.00 38.58 4.04
457 458 3.120234 TGCATATGTTGTTTGTGCGAGAG 60.120 43.478 4.29 0.00 38.58 3.20
458 459 3.120199 GCATATGTTGTTTGTGCGAGAGT 60.120 43.478 4.29 0.00 0.00 3.24
459 460 4.641954 CATATGTTGTTTGTGCGAGAGTC 58.358 43.478 0.00 0.00 0.00 3.36
460 461 0.927537 TGTTGTTTGTGCGAGAGTCG 59.072 50.000 0.00 0.00 43.89 4.18
477 478 3.307262 GCGCGCGCTGCATTTTAG 61.307 61.111 44.38 15.91 46.97 1.85
478 479 3.307262 CGCGCGCTGCATTTTAGC 61.307 61.111 30.48 6.56 46.97 3.09
484 485 2.793946 CTGCATTTTAGCGCGGCT 59.206 55.556 8.83 8.38 43.41 5.52
485 486 1.584483 CTGCATTTTAGCGCGGCTG 60.584 57.895 8.83 0.53 40.10 4.85
486 487 2.951227 GCATTTTAGCGCGGCTGC 60.951 61.111 8.83 7.70 40.10 5.25
488 489 1.584483 CATTTTAGCGCGGCTGCTG 60.584 57.895 22.96 10.42 46.70 4.41
489 490 2.764314 ATTTTAGCGCGGCTGCTGG 61.764 57.895 22.96 1.40 46.70 4.85
490 491 3.892740 TTTTAGCGCGGCTGCTGGA 62.893 57.895 22.96 12.50 46.70 3.86
491 492 4.819761 TTAGCGCGGCTGCTGGAG 62.820 66.667 22.96 0.14 46.70 3.86
518 519 4.817063 CGCGCCGTGCCAAATCAG 62.817 66.667 0.00 0.00 42.08 2.90
519 520 3.430862 GCGCCGTGCCAAATCAGA 61.431 61.111 0.00 0.00 37.76 3.27
520 521 2.480555 CGCCGTGCCAAATCAGAC 59.519 61.111 0.00 0.00 0.00 3.51
521 522 2.480555 GCCGTGCCAAATCAGACG 59.519 61.111 0.00 0.00 0.00 4.18
522 523 2.032634 GCCGTGCCAAATCAGACGA 61.033 57.895 0.00 0.00 33.64 4.20
523 524 1.369091 GCCGTGCCAAATCAGACGAT 61.369 55.000 0.00 0.00 33.64 3.73
524 525 0.374758 CCGTGCCAAATCAGACGATG 59.625 55.000 0.00 0.00 33.64 3.84
525 526 0.374758 CGTGCCAAATCAGACGATGG 59.625 55.000 0.00 0.00 33.64 3.51
526 527 0.734889 GTGCCAAATCAGACGATGGG 59.265 55.000 0.00 0.00 33.45 4.00
527 528 1.031571 TGCCAAATCAGACGATGGGC 61.032 55.000 10.05 10.05 46.10 5.36
528 529 2.051804 GCCAAATCAGACGATGGGCG 62.052 60.000 0.00 0.00 40.83 6.13
529 530 1.353103 CAAATCAGACGATGGGCGC 59.647 57.895 0.00 0.00 46.04 6.53
530 531 1.078497 AAATCAGACGATGGGCGCA 60.078 52.632 10.83 5.70 46.04 6.09
531 532 1.369091 AAATCAGACGATGGGCGCAC 61.369 55.000 10.83 6.04 46.04 5.34
532 533 4.794439 TCAGACGATGGGCGCACG 62.794 66.667 10.83 18.86 46.04 5.34
536 537 4.673298 ACGATGGGCGCACGTCAA 62.673 61.111 29.98 0.18 46.04 3.18
537 538 3.418913 CGATGGGCGCACGTCAAA 61.419 61.111 29.98 0.00 0.00 2.69
538 539 2.950673 GATGGGCGCACGTCAAAA 59.049 55.556 26.70 0.00 0.00 2.44
539 540 1.442017 GATGGGCGCACGTCAAAAC 60.442 57.895 26.70 0.00 0.00 2.43
540 541 2.123988 GATGGGCGCACGTCAAAACA 62.124 55.000 26.70 0.00 0.00 2.83
541 542 2.051345 GGGCGCACGTCAAAACAG 60.051 61.111 10.83 0.00 0.00 3.16
542 543 2.713154 GGCGCACGTCAAAACAGT 59.287 55.556 10.83 0.00 0.00 3.55
543 544 1.063488 GGCGCACGTCAAAACAGTT 59.937 52.632 10.83 0.00 0.00 3.16
544 545 0.524604 GGCGCACGTCAAAACAGTTT 60.525 50.000 10.83 0.00 0.00 2.66
545 546 1.264672 GCGCACGTCAAAACAGTTTT 58.735 45.000 0.30 5.37 0.00 2.43
546 547 1.651631 GCGCACGTCAAAACAGTTTTT 59.348 42.857 8.65 0.00 35.15 1.94
547 548 2.847133 GCGCACGTCAAAACAGTTTTTA 59.153 40.909 8.65 0.00 32.90 1.52
548 549 3.062124 GCGCACGTCAAAACAGTTTTTAG 60.062 43.478 8.65 6.04 32.90 1.85
549 550 3.062124 CGCACGTCAAAACAGTTTTTAGC 60.062 43.478 8.65 7.77 32.90 3.09
550 551 3.062124 GCACGTCAAAACAGTTTTTAGCG 60.062 43.478 8.65 14.40 37.20 4.26
551 552 3.062124 CACGTCAAAACAGTTTTTAGCGC 60.062 43.478 8.65 0.00 35.85 5.92
552 553 2.148569 CGTCAAAACAGTTTTTAGCGCG 59.851 45.455 8.65 0.00 32.90 6.86
553 554 2.098068 GTCAAAACAGTTTTTAGCGCGC 60.098 45.455 26.66 26.66 32.90 6.86
554 555 1.117234 AAAACAGTTTTTAGCGCGCG 58.883 45.000 28.44 28.44 32.90 6.86
555 556 0.028374 AAACAGTTTTTAGCGCGCGT 59.972 45.000 32.35 20.00 0.00 6.01
556 557 0.383860 AACAGTTTTTAGCGCGCGTC 60.384 50.000 32.35 22.88 0.00 5.19
557 558 1.853192 CAGTTTTTAGCGCGCGTCG 60.853 57.895 32.35 16.61 42.12 5.12
575 576 2.658593 CGTCGGCGCCTATTGGAG 60.659 66.667 26.68 6.92 36.16 3.86
576 577 2.812499 GTCGGCGCCTATTGGAGA 59.188 61.111 26.68 9.61 34.95 3.71
577 578 1.367840 GTCGGCGCCTATTGGAGAT 59.632 57.895 26.68 0.00 34.95 2.75
578 579 0.946221 GTCGGCGCCTATTGGAGATG 60.946 60.000 26.68 4.37 34.95 2.90
579 580 2.320587 CGGCGCCTATTGGAGATGC 61.321 63.158 26.68 0.00 34.95 3.91
580 581 1.072159 GGCGCCTATTGGAGATGCT 59.928 57.895 22.15 0.00 34.95 3.79
592 593 4.908601 TGGAGATGCTCTAAGAAAACCA 57.091 40.909 0.00 0.00 0.00 3.67
635 643 7.094975 CGCGATCCCAACCATTTTATATTTCTA 60.095 37.037 0.00 0.00 0.00 2.10
636 644 8.021396 GCGATCCCAACCATTTTATATTTCTAC 58.979 37.037 0.00 0.00 0.00 2.59
637 645 9.062524 CGATCCCAACCATTTTATATTTCTACA 57.937 33.333 0.00 0.00 0.00 2.74
640 648 8.637986 TCCCAACCATTTTATATTTCTACATGC 58.362 33.333 0.00 0.00 0.00 4.06
655 665 1.271597 ACATGCTGAGACCCAACCTTC 60.272 52.381 0.00 0.00 0.00 3.46
787 797 4.767633 CGAAGGTTCTCGTCTCCG 57.232 61.111 0.00 0.00 34.08 4.63
847 857 1.135199 TGTCGTCCGTCTAAATCTGGC 60.135 52.381 0.00 0.00 0.00 4.85
898 908 0.842467 CTCCAACCCAACCTCCTCCT 60.842 60.000 0.00 0.00 0.00 3.69
901 911 2.593956 AACCCAACCTCCTCCTCGC 61.594 63.158 0.00 0.00 0.00 5.03
903 913 2.685380 CCAACCTCCTCCTCGCCT 60.685 66.667 0.00 0.00 0.00 5.52
1029 1041 0.704076 CAGAGTTTTCCCCATCCCCA 59.296 55.000 0.00 0.00 0.00 4.96
1030 1042 1.077005 CAGAGTTTTCCCCATCCCCAA 59.923 52.381 0.00 0.00 0.00 4.12
1031 1043 2.010699 AGAGTTTTCCCCATCCCCAAT 58.989 47.619 0.00 0.00 0.00 3.16
1044 1056 0.636101 CCCCAATCTCCCAAATCCCA 59.364 55.000 0.00 0.00 0.00 4.37
1512 1527 2.122369 GATCCCCCTCCCCATCGT 60.122 66.667 0.00 0.00 0.00 3.73
1607 1627 1.333308 TGCATGTGTTCCGTGTTCTTG 59.667 47.619 0.00 0.00 32.30 3.02
1805 1825 3.484407 AGCCATGCTGGAATCATACTTC 58.516 45.455 6.40 0.00 40.96 3.01
1819 1839 9.994432 GGAATCATACTTCTCATTAACTTGTTG 57.006 33.333 0.00 0.00 0.00 3.33
1847 1867 5.531634 TGGATGTTTGTTGATTTCTCTTGC 58.468 37.500 0.00 0.00 0.00 4.01
1858 1878 2.275134 TTCTCTTGCCACATGCTTGA 57.725 45.000 6.60 0.00 42.00 3.02
1865 1885 4.039488 TCTTGCCACATGCTTGAGAAATTT 59.961 37.500 6.60 0.00 42.00 1.82
1919 1955 1.339929 GTTTAGTTGCCCTGGTTGTGG 59.660 52.381 0.00 0.00 0.00 4.17
1949 1985 3.437795 CTCTGGCTTTGCTGCGGG 61.438 66.667 0.00 0.00 0.00 6.13
1951 1987 3.437795 CTGGCTTTGCTGCGGGAG 61.438 66.667 0.00 0.00 0.00 4.30
1985 2021 2.173569 GCCTTGGTGGGAGATGATAGTT 59.826 50.000 0.00 0.00 36.00 2.24
1994 2030 6.830838 GGTGGGAGATGATAGTTTCAAGATTT 59.169 38.462 0.00 0.00 38.03 2.17
1995 2031 7.012799 GGTGGGAGATGATAGTTTCAAGATTTC 59.987 40.741 0.00 0.00 38.03 2.17
2002 2038 6.611381 TGATAGTTTCAAGATTTCTTTGGCG 58.389 36.000 0.00 0.00 33.11 5.69
2023 2059 4.378666 GCGAATGTTTGTTATTACGGTGGT 60.379 41.667 0.00 0.00 0.00 4.16
2031 2067 5.630661 TGTTATTACGGTGGTTTGAATGG 57.369 39.130 0.00 0.00 0.00 3.16
2088 2124 2.096496 GTCACAAGATGGAAGAATGCCG 59.904 50.000 0.00 0.00 35.24 5.69
2110 2146 5.221048 CCGGCTTTTTATTGGGTGATTCTAG 60.221 44.000 0.00 0.00 0.00 2.43
2122 2159 5.839063 TGGGTGATTCTAGTTCTATAGTGGG 59.161 44.000 0.00 0.00 0.00 4.61
2308 2353 6.371595 ACTTGATCCATCTTCTGTTCTTCT 57.628 37.500 0.00 0.00 0.00 2.85
2314 2359 8.324306 TGATCCATCTTCTGTTCTTCTATGTTT 58.676 33.333 0.00 0.00 0.00 2.83
2315 2360 9.171877 GATCCATCTTCTGTTCTTCTATGTTTT 57.828 33.333 0.00 0.00 0.00 2.43
2380 2425 3.322211 TTGGAATGCATGCCTTCTTTG 57.678 42.857 27.66 0.00 0.00 2.77
2389 2434 3.762779 CATGCCTTCTTTGGATTCGTTC 58.237 45.455 0.00 0.00 0.00 3.95
2452 2497 6.258287 TGTTTGCAACTTTCCATCTGAATTTG 59.742 34.615 0.00 0.00 32.93 2.32
2481 2526 4.791411 GCAAACGGCTATTGACAAGTTTGA 60.791 41.667 23.57 0.00 46.39 2.69
2489 2534 7.360861 CGGCTATTGACAAGTTTGAATCAGTAA 60.361 37.037 0.00 0.00 0.00 2.24
2569 2617 7.615582 TGATCAAAGTGTTTGTGATATCTCC 57.384 36.000 3.98 0.00 41.36 3.71
2574 2622 6.365970 AAGTGTTTGTGATATCTCCTCTGT 57.634 37.500 3.98 0.00 0.00 3.41
2576 2624 6.402222 AGTGTTTGTGATATCTCCTCTGTTC 58.598 40.000 3.98 0.00 0.00 3.18
2610 2658 2.100584 TGTCCGCTTCAAACAATTTGCT 59.899 40.909 0.00 0.00 40.43 3.91
2631 2679 1.346068 GCTGCCCCCTCAAGTATCTAG 59.654 57.143 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.133362 CGTTGTACCCTTGGCCTCTTATA 59.867 47.826 3.32 0.00 0.00 0.98
1 2 2.093128 CGTTGTACCCTTGGCCTCTTAT 60.093 50.000 3.32 0.00 0.00 1.73
2 3 1.276989 CGTTGTACCCTTGGCCTCTTA 59.723 52.381 3.32 0.00 0.00 2.10
3 4 0.036306 CGTTGTACCCTTGGCCTCTT 59.964 55.000 3.32 0.00 0.00 2.85
4 5 1.125711 ACGTTGTACCCTTGGCCTCT 61.126 55.000 3.32 0.00 0.00 3.69
5 6 0.953960 CACGTTGTACCCTTGGCCTC 60.954 60.000 3.32 0.00 0.00 4.70
6 7 1.072505 CACGTTGTACCCTTGGCCT 59.927 57.895 3.32 0.00 0.00 5.19
7 8 1.228033 ACACGTTGTACCCTTGGCC 60.228 57.895 0.00 0.00 0.00 5.36
8 9 1.232621 GGACACGTTGTACCCTTGGC 61.233 60.000 0.00 0.00 0.00 4.52
9 10 0.947180 CGGACACGTTGTACCCTTGG 60.947 60.000 0.00 0.00 34.81 3.61
10 11 0.032403 TCGGACACGTTGTACCCTTG 59.968 55.000 0.00 0.00 41.85 3.61
11 12 0.032540 GTCGGACACGTTGTACCCTT 59.967 55.000 2.62 0.00 41.85 3.95
12 13 0.825010 AGTCGGACACGTTGTACCCT 60.825 55.000 11.27 0.00 41.85 4.34
13 14 0.387750 GAGTCGGACACGTTGTACCC 60.388 60.000 11.27 0.00 41.85 3.69
14 15 0.387750 GGAGTCGGACACGTTGTACC 60.388 60.000 11.27 0.00 41.85 3.34
15 16 0.727122 CGGAGTCGGACACGTTGTAC 60.727 60.000 11.27 0.00 41.85 2.90
16 17 0.884259 TCGGAGTCGGACACGTTGTA 60.884 55.000 19.60 3.64 41.85 2.41
17 18 2.188829 TCGGAGTCGGACACGTTGT 61.189 57.895 19.60 0.00 41.85 3.32
18 19 1.728426 GTCGGAGTCGGACACGTTG 60.728 63.158 22.11 5.34 41.85 4.10
19 20 2.188829 TGTCGGAGTCGGACACGTT 61.189 57.895 24.90 0.00 41.85 3.99
20 21 2.592574 TGTCGGAGTCGGACACGT 60.593 61.111 24.90 0.00 41.85 4.49
21 22 1.293963 TAGTGTCGGAGTCGGACACG 61.294 60.000 37.49 16.21 44.26 4.49
22 23 0.167689 GTAGTGTCGGAGTCGGACAC 59.832 60.000 37.65 37.65 42.24 3.67
23 24 0.250424 TGTAGTGTCGGAGTCGGACA 60.250 55.000 24.90 24.90 36.95 4.02
24 25 0.877071 TTGTAGTGTCGGAGTCGGAC 59.123 55.000 20.71 20.71 36.95 4.79
25 26 1.162698 CTTGTAGTGTCGGAGTCGGA 58.837 55.000 0.00 0.00 36.95 4.55
26 27 0.879765 ACTTGTAGTGTCGGAGTCGG 59.120 55.000 0.00 0.00 36.95 4.79
27 28 3.242673 GGATACTTGTAGTGTCGGAGTCG 60.243 52.174 0.00 0.00 37.24 4.18
28 29 4.290104 GGATACTTGTAGTGTCGGAGTC 57.710 50.000 0.00 0.00 37.24 3.36
44 45 5.599656 TGGTGTTGTAGTATGGGTAGGATAC 59.400 44.000 0.00 0.00 42.04 2.24
45 46 5.779636 TGGTGTTGTAGTATGGGTAGGATA 58.220 41.667 0.00 0.00 0.00 2.59
46 47 4.627015 TGGTGTTGTAGTATGGGTAGGAT 58.373 43.478 0.00 0.00 0.00 3.24
47 48 4.063851 TGGTGTTGTAGTATGGGTAGGA 57.936 45.455 0.00 0.00 0.00 2.94
48 49 4.224370 ACTTGGTGTTGTAGTATGGGTAGG 59.776 45.833 0.00 0.00 0.00 3.18
49 50 5.416271 ACTTGGTGTTGTAGTATGGGTAG 57.584 43.478 0.00 0.00 0.00 3.18
50 51 4.223477 GGACTTGGTGTTGTAGTATGGGTA 59.777 45.833 0.00 0.00 0.00 3.69
51 52 3.008704 GGACTTGGTGTTGTAGTATGGGT 59.991 47.826 0.00 0.00 0.00 4.51
52 53 3.008594 TGGACTTGGTGTTGTAGTATGGG 59.991 47.826 0.00 0.00 0.00 4.00
53 54 4.280436 TGGACTTGGTGTTGTAGTATGG 57.720 45.455 0.00 0.00 0.00 2.74
54 55 4.154195 GCTTGGACTTGGTGTTGTAGTATG 59.846 45.833 0.00 0.00 0.00 2.39
55 56 4.324267 GCTTGGACTTGGTGTTGTAGTAT 58.676 43.478 0.00 0.00 0.00 2.12
56 57 3.735591 GCTTGGACTTGGTGTTGTAGTA 58.264 45.455 0.00 0.00 0.00 1.82
57 58 2.572290 GCTTGGACTTGGTGTTGTAGT 58.428 47.619 0.00 0.00 0.00 2.73
58 59 1.531149 CGCTTGGACTTGGTGTTGTAG 59.469 52.381 0.00 0.00 0.00 2.74
59 60 1.134340 ACGCTTGGACTTGGTGTTGTA 60.134 47.619 0.00 0.00 0.00 2.41
60 61 0.393808 ACGCTTGGACTTGGTGTTGT 60.394 50.000 0.00 0.00 0.00 3.32
61 62 1.588674 TACGCTTGGACTTGGTGTTG 58.411 50.000 0.00 0.00 0.00 3.33
62 63 1.944709 GTTACGCTTGGACTTGGTGTT 59.055 47.619 0.00 0.00 0.00 3.32
63 64 1.589803 GTTACGCTTGGACTTGGTGT 58.410 50.000 0.00 0.00 0.00 4.16
64 65 0.872388 GGTTACGCTTGGACTTGGTG 59.128 55.000 0.00 0.00 0.00 4.17
65 66 0.250597 GGGTTACGCTTGGACTTGGT 60.251 55.000 0.00 0.00 0.00 3.67
66 67 0.250553 TGGGTTACGCTTGGACTTGG 60.251 55.000 0.36 0.00 0.00 3.61
67 68 1.265905 GTTGGGTTACGCTTGGACTTG 59.734 52.381 0.36 0.00 0.00 3.16
68 69 1.142262 AGTTGGGTTACGCTTGGACTT 59.858 47.619 0.36 0.00 0.00 3.01
69 70 0.763035 AGTTGGGTTACGCTTGGACT 59.237 50.000 0.36 0.00 0.00 3.85
70 71 2.289257 ACTAGTTGGGTTACGCTTGGAC 60.289 50.000 0.36 0.00 0.00 4.02
71 72 1.972795 ACTAGTTGGGTTACGCTTGGA 59.027 47.619 0.36 0.00 0.00 3.53
72 73 2.467566 ACTAGTTGGGTTACGCTTGG 57.532 50.000 0.36 0.00 0.00 3.61
73 74 3.916761 TGTACTAGTTGGGTTACGCTTG 58.083 45.455 0.00 0.00 0.00 4.01
74 75 4.605640 TTGTACTAGTTGGGTTACGCTT 57.394 40.909 0.00 0.00 0.00 4.68
75 76 4.605640 TTTGTACTAGTTGGGTTACGCT 57.394 40.909 0.00 0.00 0.00 5.07
76 77 5.868043 ATTTTGTACTAGTTGGGTTACGC 57.132 39.130 0.00 0.00 0.00 4.42
77 78 8.323140 CGAATATTTTGTACTAGTTGGGTTACG 58.677 37.037 0.00 0.00 0.00 3.18
78 79 9.369904 TCGAATATTTTGTACTAGTTGGGTTAC 57.630 33.333 0.00 0.00 0.00 2.50
79 80 9.369904 GTCGAATATTTTGTACTAGTTGGGTTA 57.630 33.333 0.00 0.00 0.00 2.85
80 81 7.879160 TGTCGAATATTTTGTACTAGTTGGGTT 59.121 33.333 0.00 0.00 0.00 4.11
81 82 7.332678 GTGTCGAATATTTTGTACTAGTTGGGT 59.667 37.037 0.00 0.00 0.00 4.51
82 83 7.332430 TGTGTCGAATATTTTGTACTAGTTGGG 59.668 37.037 0.00 0.00 0.00 4.12
83 84 8.246908 TGTGTCGAATATTTTGTACTAGTTGG 57.753 34.615 0.00 0.00 0.00 3.77
86 87 9.263538 TGTTTGTGTCGAATATTTTGTACTAGT 57.736 29.630 0.00 0.00 0.00 2.57
87 88 9.525007 GTGTTTGTGTCGAATATTTTGTACTAG 57.475 33.333 0.00 0.00 0.00 2.57
88 89 9.043079 TGTGTTTGTGTCGAATATTTTGTACTA 57.957 29.630 0.00 0.00 0.00 1.82
89 90 7.921787 TGTGTTTGTGTCGAATATTTTGTACT 58.078 30.769 0.00 0.00 0.00 2.73
90 91 8.466026 GTTGTGTTTGTGTCGAATATTTTGTAC 58.534 33.333 0.00 0.00 0.00 2.90
91 92 8.182227 TGTTGTGTTTGTGTCGAATATTTTGTA 58.818 29.630 0.00 0.00 0.00 2.41
92 93 7.030165 TGTTGTGTTTGTGTCGAATATTTTGT 58.970 30.769 0.00 0.00 0.00 2.83
93 94 7.443218 TGTTGTGTTTGTGTCGAATATTTTG 57.557 32.000 0.00 0.00 0.00 2.44
94 95 8.538856 CAATGTTGTGTTTGTGTCGAATATTTT 58.461 29.630 0.00 0.00 0.00 1.82
95 96 7.168972 CCAATGTTGTGTTTGTGTCGAATATTT 59.831 33.333 0.00 0.00 0.00 1.40
96 97 6.640499 CCAATGTTGTGTTTGTGTCGAATATT 59.360 34.615 0.00 0.00 0.00 1.28
97 98 6.148948 CCAATGTTGTGTTTGTGTCGAATAT 58.851 36.000 0.00 0.00 0.00 1.28
98 99 5.506483 CCCAATGTTGTGTTTGTGTCGAATA 60.506 40.000 0.00 0.00 0.00 1.75
99 100 4.358851 CCAATGTTGTGTTTGTGTCGAAT 58.641 39.130 0.00 0.00 0.00 3.34
100 101 3.428180 CCCAATGTTGTGTTTGTGTCGAA 60.428 43.478 0.00 0.00 0.00 3.71
101 102 2.098280 CCCAATGTTGTGTTTGTGTCGA 59.902 45.455 0.00 0.00 0.00 4.20
102 103 2.098280 TCCCAATGTTGTGTTTGTGTCG 59.902 45.455 0.00 0.00 0.00 4.35
103 104 3.119316 TGTCCCAATGTTGTGTTTGTGTC 60.119 43.478 0.00 0.00 0.00 3.67
104 105 2.828520 TGTCCCAATGTTGTGTTTGTGT 59.171 40.909 0.00 0.00 0.00 3.72
105 106 3.516981 TGTCCCAATGTTGTGTTTGTG 57.483 42.857 0.00 0.00 0.00 3.33
106 107 3.069443 GGATGTCCCAATGTTGTGTTTGT 59.931 43.478 0.00 0.00 34.14 2.83
107 108 3.652274 GGATGTCCCAATGTTGTGTTTG 58.348 45.455 0.00 0.00 34.14 2.93
121 122 2.509336 CACTCGCACGGGATGTCC 60.509 66.667 0.00 0.00 0.00 4.02
122 123 3.188786 GCACTCGCACGGGATGTC 61.189 66.667 0.00 0.00 38.36 3.06
124 125 4.794439 TCGCACTCGCACGGGATG 62.794 66.667 0.00 0.00 38.40 3.51
125 126 4.796231 GTCGCACTCGCACGGGAT 62.796 66.667 0.00 0.00 38.40 3.85
134 135 4.803426 CAGCCCTCCGTCGCACTC 62.803 72.222 0.00 0.00 0.00 3.51
136 137 3.876589 TTTCAGCCCTCCGTCGCAC 62.877 63.158 0.00 0.00 0.00 5.34
137 138 3.589654 CTTTCAGCCCTCCGTCGCA 62.590 63.158 0.00 0.00 0.00 5.10
138 139 2.815647 CTTTCAGCCCTCCGTCGC 60.816 66.667 0.00 0.00 0.00 5.19
139 140 2.125512 CCTTTCAGCCCTCCGTCG 60.126 66.667 0.00 0.00 0.00 5.12
140 141 2.269241 CCCTTTCAGCCCTCCGTC 59.731 66.667 0.00 0.00 0.00 4.79
141 142 2.529389 ACCCTTTCAGCCCTCCGT 60.529 61.111 0.00 0.00 0.00 4.69
142 143 2.045926 CACCCTTTCAGCCCTCCG 60.046 66.667 0.00 0.00 0.00 4.63
143 144 2.356667 CCACCCTTTCAGCCCTCC 59.643 66.667 0.00 0.00 0.00 4.30
144 145 2.361737 GCCACCCTTTCAGCCCTC 60.362 66.667 0.00 0.00 0.00 4.30
145 146 3.984732 GGCCACCCTTTCAGCCCT 61.985 66.667 0.00 0.00 39.60 5.19
148 149 4.660938 ACGGGCCACCCTTTCAGC 62.661 66.667 4.39 0.00 42.67 4.26
149 150 1.112916 AAAACGGGCCACCCTTTCAG 61.113 55.000 4.39 0.00 42.67 3.02
150 151 1.075896 AAAACGGGCCACCCTTTCA 60.076 52.632 4.39 0.00 42.67 2.69
151 152 1.365999 CAAAACGGGCCACCCTTTC 59.634 57.895 4.39 0.00 42.67 2.62
152 153 0.978667 AACAAAACGGGCCACCCTTT 60.979 50.000 4.39 0.00 42.67 3.11
153 154 1.382009 AACAAAACGGGCCACCCTT 60.382 52.632 4.39 0.00 42.67 3.95
154 155 2.131067 CAACAAAACGGGCCACCCT 61.131 57.895 4.39 0.00 42.67 4.34
155 156 2.419620 CAACAAAACGGGCCACCC 59.580 61.111 4.39 0.00 41.09 4.61
156 157 2.279851 GCAACAAAACGGGCCACC 60.280 61.111 4.39 0.00 0.00 4.61
157 158 2.279851 GGCAACAAAACGGGCCAC 60.280 61.111 4.39 0.00 45.70 5.01
159 160 2.338620 GAGGCAACAAAACGGGCC 59.661 61.111 0.00 0.00 46.77 5.80
160 161 0.891904 TAGGAGGCAACAAAACGGGC 60.892 55.000 0.00 0.00 41.41 6.13
161 162 1.743394 GATAGGAGGCAACAAAACGGG 59.257 52.381 0.00 0.00 41.41 5.28
162 163 2.432444 TGATAGGAGGCAACAAAACGG 58.568 47.619 0.00 0.00 41.41 4.44
163 164 3.731867 GCATGATAGGAGGCAACAAAACG 60.732 47.826 0.00 0.00 41.41 3.60
164 165 3.429410 GGCATGATAGGAGGCAACAAAAC 60.429 47.826 0.00 0.00 41.41 2.43
165 166 2.760092 GGCATGATAGGAGGCAACAAAA 59.240 45.455 0.00 0.00 41.41 2.44
166 167 2.291475 TGGCATGATAGGAGGCAACAAA 60.291 45.455 0.00 0.00 41.41 2.83
167 168 1.284491 TGGCATGATAGGAGGCAACAA 59.716 47.619 0.00 0.00 41.41 2.83
168 169 0.918258 TGGCATGATAGGAGGCAACA 59.082 50.000 0.00 0.00 41.41 3.33
169 170 2.283145 ATGGCATGATAGGAGGCAAC 57.717 50.000 0.00 0.00 41.29 4.17
170 171 2.811504 CGAATGGCATGATAGGAGGCAA 60.812 50.000 0.00 0.00 41.29 4.52
171 172 1.271001 CGAATGGCATGATAGGAGGCA 60.271 52.381 0.00 0.00 42.19 4.75
172 173 1.002430 TCGAATGGCATGATAGGAGGC 59.998 52.381 0.00 0.00 0.00 4.70
173 174 2.693069 GTCGAATGGCATGATAGGAGG 58.307 52.381 0.00 0.00 0.00 4.30
174 175 2.288457 ACGTCGAATGGCATGATAGGAG 60.288 50.000 0.00 0.00 0.00 3.69
175 176 1.686587 ACGTCGAATGGCATGATAGGA 59.313 47.619 0.00 0.00 0.00 2.94
176 177 2.061773 GACGTCGAATGGCATGATAGG 58.938 52.381 0.00 0.00 0.00 2.57
177 178 2.061773 GGACGTCGAATGGCATGATAG 58.938 52.381 9.92 0.00 0.00 2.08
178 179 1.270094 GGGACGTCGAATGGCATGATA 60.270 52.381 9.92 0.00 0.00 2.15
179 180 0.532862 GGGACGTCGAATGGCATGAT 60.533 55.000 9.92 0.00 0.00 2.45
180 181 1.153449 GGGACGTCGAATGGCATGA 60.153 57.895 9.92 0.00 0.00 3.07
181 182 3.409856 GGGACGTCGAATGGCATG 58.590 61.111 9.92 0.00 0.00 4.06
194 195 1.230635 ATCATTATGCGCTGCGGGAC 61.231 55.000 24.61 7.72 0.00 4.46
195 196 0.950555 GATCATTATGCGCTGCGGGA 60.951 55.000 24.61 6.16 0.00 5.14
196 197 0.952497 AGATCATTATGCGCTGCGGG 60.952 55.000 24.61 0.00 0.00 6.13
197 198 0.870393 AAGATCATTATGCGCTGCGG 59.130 50.000 24.61 5.75 0.00 5.69
198 199 1.528161 TGAAGATCATTATGCGCTGCG 59.472 47.619 19.17 19.17 0.00 5.18
199 200 2.804527 TCTGAAGATCATTATGCGCTGC 59.195 45.455 9.73 0.00 0.00 5.25
200 201 4.083961 CCTTCTGAAGATCATTATGCGCTG 60.084 45.833 18.68 0.00 0.00 5.18
201 202 4.063689 CCTTCTGAAGATCATTATGCGCT 58.936 43.478 18.68 0.00 0.00 5.92
202 203 4.060900 TCCTTCTGAAGATCATTATGCGC 58.939 43.478 18.68 0.00 0.00 6.09
203 204 6.164876 AGATCCTTCTGAAGATCATTATGCG 58.835 40.000 18.68 0.00 0.00 4.73
204 205 7.160049 TGAGATCCTTCTGAAGATCATTATGC 58.840 38.462 18.68 7.15 30.30 3.14
205 206 9.727859 AATGAGATCCTTCTGAAGATCATTATG 57.272 33.333 23.27 8.22 30.30 1.90
206 207 9.727859 CAATGAGATCCTTCTGAAGATCATTAT 57.272 33.333 23.65 15.33 30.30 1.28
207 208 8.931568 TCAATGAGATCCTTCTGAAGATCATTA 58.068 33.333 23.65 16.09 30.30 1.90
208 209 7.803131 TCAATGAGATCCTTCTGAAGATCATT 58.197 34.615 18.68 20.32 30.30 2.57
209 210 7.376335 TCAATGAGATCCTTCTGAAGATCAT 57.624 36.000 18.68 16.62 30.30 2.45
210 211 6.183360 CCTCAATGAGATCCTTCTGAAGATCA 60.183 42.308 18.68 15.33 30.30 2.92
211 212 6.041865 TCCTCAATGAGATCCTTCTGAAGATC 59.958 42.308 18.68 16.91 30.30 2.75
212 213 5.904169 TCCTCAATGAGATCCTTCTGAAGAT 59.096 40.000 18.68 9.94 30.30 2.40
213 214 5.275630 TCCTCAATGAGATCCTTCTGAAGA 58.724 41.667 18.68 5.61 30.30 2.87
214 215 5.129155 ACTCCTCAATGAGATCCTTCTGAAG 59.871 44.000 12.53 10.46 36.22 3.02
215 216 5.028802 ACTCCTCAATGAGATCCTTCTGAA 58.971 41.667 12.53 0.00 36.22 3.02
216 217 4.405036 CACTCCTCAATGAGATCCTTCTGA 59.595 45.833 12.53 0.00 36.22 3.27
217 218 4.443175 CCACTCCTCAATGAGATCCTTCTG 60.443 50.000 12.53 0.00 36.22 3.02
218 219 3.710677 CCACTCCTCAATGAGATCCTTCT 59.289 47.826 12.53 0.00 36.22 2.85
219 220 3.454082 ACCACTCCTCAATGAGATCCTTC 59.546 47.826 12.53 0.00 36.22 3.46
220 221 3.199508 CACCACTCCTCAATGAGATCCTT 59.800 47.826 12.53 0.00 36.22 3.36
221 222 2.770802 CACCACTCCTCAATGAGATCCT 59.229 50.000 12.53 0.00 36.22 3.24
222 223 2.158842 CCACCACTCCTCAATGAGATCC 60.159 54.545 12.53 0.00 36.22 3.36
223 224 2.158842 CCCACCACTCCTCAATGAGATC 60.159 54.545 12.53 0.00 36.22 2.75
224 225 1.842562 CCCACCACTCCTCAATGAGAT 59.157 52.381 12.53 0.00 36.22 2.75
225 226 1.279496 CCCACCACTCCTCAATGAGA 58.721 55.000 12.53 0.00 36.22 3.27
226 227 0.393537 GCCCACCACTCCTCAATGAG 60.394 60.000 2.68 2.68 38.37 2.90
227 228 1.133181 TGCCCACCACTCCTCAATGA 61.133 55.000 0.00 0.00 0.00 2.57
228 229 0.033796 ATGCCCACCACTCCTCAATG 60.034 55.000 0.00 0.00 0.00 2.82
229 230 0.033796 CATGCCCACCACTCCTCAAT 60.034 55.000 0.00 0.00 0.00 2.57
230 231 1.379916 CATGCCCACCACTCCTCAA 59.620 57.895 0.00 0.00 0.00 3.02
231 232 2.605607 CCATGCCCACCACTCCTCA 61.606 63.158 0.00 0.00 0.00 3.86
232 233 1.852157 TTCCATGCCCACCACTCCTC 61.852 60.000 0.00 0.00 0.00 3.71
233 234 1.217057 ATTCCATGCCCACCACTCCT 61.217 55.000 0.00 0.00 0.00 3.69
234 235 1.039233 CATTCCATGCCCACCACTCC 61.039 60.000 0.00 0.00 0.00 3.85
235 236 1.039233 CCATTCCATGCCCACCACTC 61.039 60.000 0.00 0.00 0.00 3.51
236 237 1.000739 CCATTCCATGCCCACCACT 59.999 57.895 0.00 0.00 0.00 4.00
237 238 1.000233 TCCATTCCATGCCCACCAC 60.000 57.895 0.00 0.00 0.00 4.16
238 239 1.000233 GTCCATTCCATGCCCACCA 60.000 57.895 0.00 0.00 0.00 4.17
239 240 2.120909 CGTCCATTCCATGCCCACC 61.121 63.158 0.00 0.00 0.00 4.61
240 241 1.077787 TCGTCCATTCCATGCCCAC 60.078 57.895 0.00 0.00 0.00 4.61
241 242 1.077787 GTCGTCCATTCCATGCCCA 60.078 57.895 0.00 0.00 0.00 5.36
242 243 0.679640 TTGTCGTCCATTCCATGCCC 60.680 55.000 0.00 0.00 0.00 5.36
243 244 1.133025 CTTTGTCGTCCATTCCATGCC 59.867 52.381 0.00 0.00 0.00 4.40
244 245 2.083774 TCTTTGTCGTCCATTCCATGC 58.916 47.619 0.00 0.00 0.00 4.06
245 246 2.096496 GCTCTTTGTCGTCCATTCCATG 59.904 50.000 0.00 0.00 0.00 3.66
246 247 2.290260 TGCTCTTTGTCGTCCATTCCAT 60.290 45.455 0.00 0.00 0.00 3.41
247 248 1.071542 TGCTCTTTGTCGTCCATTCCA 59.928 47.619 0.00 0.00 0.00 3.53
248 249 1.808411 TGCTCTTTGTCGTCCATTCC 58.192 50.000 0.00 0.00 0.00 3.01
249 250 3.002791 TGATGCTCTTTGTCGTCCATTC 58.997 45.455 0.00 0.00 0.00 2.67
250 251 3.057969 TGATGCTCTTTGTCGTCCATT 57.942 42.857 0.00 0.00 0.00 3.16
251 252 2.768253 TGATGCTCTTTGTCGTCCAT 57.232 45.000 0.00 0.00 0.00 3.41
252 253 2.028203 TCATGATGCTCTTTGTCGTCCA 60.028 45.455 0.00 0.00 0.00 4.02
253 254 2.621338 TCATGATGCTCTTTGTCGTCC 58.379 47.619 0.00 0.00 0.00 4.79
254 255 4.871993 AATCATGATGCTCTTTGTCGTC 57.128 40.909 9.46 0.00 0.00 4.20
255 256 4.456911 ACAAATCATGATGCTCTTTGTCGT 59.543 37.500 15.39 0.00 35.70 4.34
256 257 4.791676 CACAAATCATGATGCTCTTTGTCG 59.208 41.667 17.40 11.48 37.80 4.35
257 258 4.561606 GCACAAATCATGATGCTCTTTGTC 59.438 41.667 17.40 11.05 37.80 3.18
258 259 4.491676 GCACAAATCATGATGCTCTTTGT 58.508 39.130 15.39 15.39 39.81 2.83
259 260 3.546271 CGCACAAATCATGATGCTCTTTG 59.454 43.478 9.46 12.50 35.35 2.77
260 261 3.192001 ACGCACAAATCATGATGCTCTTT 59.808 39.130 9.46 0.00 35.35 2.52
261 262 2.751259 ACGCACAAATCATGATGCTCTT 59.249 40.909 9.46 0.00 35.35 2.85
262 263 2.362736 ACGCACAAATCATGATGCTCT 58.637 42.857 9.46 0.00 35.35 4.09
263 264 2.838386 ACGCACAAATCATGATGCTC 57.162 45.000 9.46 0.00 35.35 4.26
264 265 2.476686 CGAACGCACAAATCATGATGCT 60.477 45.455 9.46 0.00 35.35 3.79
265 266 1.841944 CGAACGCACAAATCATGATGC 59.158 47.619 9.46 8.99 34.65 3.91
266 267 3.388149 TCGAACGCACAAATCATGATG 57.612 42.857 9.46 1.33 0.00 3.07
267 268 5.929697 ATATCGAACGCACAAATCATGAT 57.070 34.783 1.18 1.18 0.00 2.45
268 269 5.064579 ACAATATCGAACGCACAAATCATGA 59.935 36.000 0.00 0.00 0.00 3.07
269 270 5.265477 ACAATATCGAACGCACAAATCATG 58.735 37.500 0.00 0.00 0.00 3.07
270 271 5.484173 ACAATATCGAACGCACAAATCAT 57.516 34.783 0.00 0.00 0.00 2.45
271 272 4.937696 ACAATATCGAACGCACAAATCA 57.062 36.364 0.00 0.00 0.00 2.57
272 273 6.905076 ACAATACAATATCGAACGCACAAATC 59.095 34.615 0.00 0.00 0.00 2.17
273 274 6.781138 ACAATACAATATCGAACGCACAAAT 58.219 32.000 0.00 0.00 0.00 2.32
274 275 6.171932 ACAATACAATATCGAACGCACAAA 57.828 33.333 0.00 0.00 0.00 2.83
275 276 5.788055 ACAATACAATATCGAACGCACAA 57.212 34.783 0.00 0.00 0.00 3.33
276 277 5.348997 TCAACAATACAATATCGAACGCACA 59.651 36.000 0.00 0.00 0.00 4.57
277 278 5.791589 TCAACAATACAATATCGAACGCAC 58.208 37.500 0.00 0.00 0.00 5.34
278 279 6.091577 AGTTCAACAATACAATATCGAACGCA 59.908 34.615 0.00 0.00 37.25 5.24
279 280 6.408039 CAGTTCAACAATACAATATCGAACGC 59.592 38.462 0.00 0.00 37.25 4.84
280 281 7.453034 ACAGTTCAACAATACAATATCGAACG 58.547 34.615 0.00 0.00 37.25 3.95
281 282 9.607285 AAACAGTTCAACAATACAATATCGAAC 57.393 29.630 0.00 0.00 33.41 3.95
282 283 9.605955 CAAACAGTTCAACAATACAATATCGAA 57.394 29.630 0.00 0.00 0.00 3.71
283 284 8.779303 ACAAACAGTTCAACAATACAATATCGA 58.221 29.630 0.00 0.00 0.00 3.59
284 285 8.948853 ACAAACAGTTCAACAATACAATATCG 57.051 30.769 0.00 0.00 0.00 2.92
287 288 9.295214 CACAACAAACAGTTCAACAATACAATA 57.705 29.630 0.00 0.00 38.74 1.90
288 289 7.816995 ACACAACAAACAGTTCAACAATACAAT 59.183 29.630 0.00 0.00 38.74 2.71
289 290 7.148641 ACACAACAAACAGTTCAACAATACAA 58.851 30.769 0.00 0.00 38.74 2.41
290 291 6.682746 ACACAACAAACAGTTCAACAATACA 58.317 32.000 0.00 0.00 38.74 2.29
291 292 7.575332 AACACAACAAACAGTTCAACAATAC 57.425 32.000 0.00 0.00 38.74 1.89
292 293 9.862371 ATAAACACAACAAACAGTTCAACAATA 57.138 25.926 0.00 0.00 38.74 1.90
293 294 8.770438 ATAAACACAACAAACAGTTCAACAAT 57.230 26.923 0.00 0.00 38.74 2.71
294 295 8.491152 CAATAAACACAACAAACAGTTCAACAA 58.509 29.630 0.00 0.00 38.74 2.83
295 296 7.359598 GCAATAAACACAACAAACAGTTCAACA 60.360 33.333 0.00 0.00 38.74 3.33
296 297 6.953189 GCAATAAACACAACAAACAGTTCAAC 59.047 34.615 0.00 0.00 38.74 3.18
297 298 6.646653 TGCAATAAACACAACAAACAGTTCAA 59.353 30.769 0.00 0.00 38.74 2.69
298 299 6.090088 GTGCAATAAACACAACAAACAGTTCA 59.910 34.615 0.00 0.00 38.74 3.18
299 300 6.310224 AGTGCAATAAACACAACAAACAGTTC 59.690 34.615 0.00 0.00 38.74 3.01
300 301 6.162777 AGTGCAATAAACACAACAAACAGTT 58.837 32.000 0.00 0.00 42.42 3.16
301 302 5.719173 AGTGCAATAAACACAACAAACAGT 58.281 33.333 0.00 0.00 40.59 3.55
302 303 7.928908 ATAGTGCAATAAACACAACAAACAG 57.071 32.000 0.00 0.00 40.59 3.16
303 304 8.598924 CAAATAGTGCAATAAACACAACAAACA 58.401 29.630 0.00 0.00 40.59 2.83
304 305 8.599774 ACAAATAGTGCAATAAACACAACAAAC 58.400 29.630 0.00 0.00 40.59 2.93
305 306 8.709386 ACAAATAGTGCAATAAACACAACAAA 57.291 26.923 0.00 0.00 40.59 2.83
306 307 8.598924 CAACAAATAGTGCAATAAACACAACAA 58.401 29.630 0.00 0.00 40.59 2.83
307 308 7.761704 ACAACAAATAGTGCAATAAACACAACA 59.238 29.630 0.00 0.00 40.59 3.33
308 309 8.125728 ACAACAAATAGTGCAATAAACACAAC 57.874 30.769 0.00 0.00 40.59 3.32
309 310 9.973450 ATACAACAAATAGTGCAATAAACACAA 57.027 25.926 0.00 0.00 40.59 3.33
310 311 9.973450 AATACAACAAATAGTGCAATAAACACA 57.027 25.926 0.00 0.00 40.59 3.72
315 316 9.335891 CGTTCAATACAACAAATAGTGCAATAA 57.664 29.630 0.00 0.00 0.00 1.40
316 317 8.722394 TCGTTCAATACAACAAATAGTGCAATA 58.278 29.630 0.00 0.00 0.00 1.90
317 318 7.589395 TCGTTCAATACAACAAATAGTGCAAT 58.411 30.769 0.00 0.00 0.00 3.56
318 319 6.960468 TCGTTCAATACAACAAATAGTGCAA 58.040 32.000 0.00 0.00 0.00 4.08
319 320 6.546972 TCGTTCAATACAACAAATAGTGCA 57.453 33.333 0.00 0.00 0.00 4.57
320 321 9.549509 TTTATCGTTCAATACAACAAATAGTGC 57.450 29.630 0.00 0.00 0.00 4.40
325 326 9.959749 AACAGTTTATCGTTCAATACAACAAAT 57.040 25.926 0.00 0.00 0.00 2.32
326 327 9.790389 AAACAGTTTATCGTTCAATACAACAAA 57.210 25.926 0.00 0.00 0.00 2.83
327 328 9.227490 CAAACAGTTTATCGTTCAATACAACAA 57.773 29.630 0.00 0.00 0.00 2.83
328 329 8.399425 ACAAACAGTTTATCGTTCAATACAACA 58.601 29.630 0.00 0.00 0.00 3.33
329 330 8.776680 ACAAACAGTTTATCGTTCAATACAAC 57.223 30.769 0.00 0.00 0.00 3.32
345 346 8.452534 TCGTTATTACAACTCAAACAAACAGTT 58.547 29.630 0.00 0.00 43.89 3.16
346 347 7.976826 TCGTTATTACAACTCAAACAAACAGT 58.023 30.769 0.00 0.00 0.00 3.55
347 348 8.829514 TTCGTTATTACAACTCAAACAAACAG 57.170 30.769 0.00 0.00 0.00 3.16
348 349 9.790389 ATTTCGTTATTACAACTCAAACAAACA 57.210 25.926 0.00 0.00 0.00 2.83
399 400 9.598517 AGAAGCAAAAAGATCAAACACAAATAA 57.401 25.926 0.00 0.00 0.00 1.40
400 401 9.033481 CAGAAGCAAAAAGATCAAACACAAATA 57.967 29.630 0.00 0.00 0.00 1.40
401 402 7.550196 ACAGAAGCAAAAAGATCAAACACAAAT 59.450 29.630 0.00 0.00 0.00 2.32
402 403 6.873076 ACAGAAGCAAAAAGATCAAACACAAA 59.127 30.769 0.00 0.00 0.00 2.83
403 404 6.397272 ACAGAAGCAAAAAGATCAAACACAA 58.603 32.000 0.00 0.00 0.00 3.33
404 405 5.964758 ACAGAAGCAAAAAGATCAAACACA 58.035 33.333 0.00 0.00 0.00 3.72
405 406 6.892310 AACAGAAGCAAAAAGATCAAACAC 57.108 33.333 0.00 0.00 0.00 3.32
406 407 7.148440 CCAAAACAGAAGCAAAAAGATCAAACA 60.148 33.333 0.00 0.00 0.00 2.83
407 408 7.064490 TCCAAAACAGAAGCAAAAAGATCAAAC 59.936 33.333 0.00 0.00 0.00 2.93
408 409 7.102346 TCCAAAACAGAAGCAAAAAGATCAAA 58.898 30.769 0.00 0.00 0.00 2.69
409 410 6.638610 TCCAAAACAGAAGCAAAAAGATCAA 58.361 32.000 0.00 0.00 0.00 2.57
410 411 6.219417 TCCAAAACAGAAGCAAAAAGATCA 57.781 33.333 0.00 0.00 0.00 2.92
411 412 7.570161 CATTCCAAAACAGAAGCAAAAAGATC 58.430 34.615 0.00 0.00 0.00 2.75
412 413 6.017687 GCATTCCAAAACAGAAGCAAAAAGAT 60.018 34.615 0.00 0.00 0.00 2.40
413 414 5.294060 GCATTCCAAAACAGAAGCAAAAAGA 59.706 36.000 0.00 0.00 0.00 2.52
414 415 5.064962 TGCATTCCAAAACAGAAGCAAAAAG 59.935 36.000 0.00 0.00 30.10 2.27
415 416 4.940046 TGCATTCCAAAACAGAAGCAAAAA 59.060 33.333 0.00 0.00 30.10 1.94
416 417 4.511527 TGCATTCCAAAACAGAAGCAAAA 58.488 34.783 0.00 0.00 30.10 2.44
417 418 4.134379 TGCATTCCAAAACAGAAGCAAA 57.866 36.364 0.00 0.00 30.10 3.68
418 419 3.815856 TGCATTCCAAAACAGAAGCAA 57.184 38.095 0.00 0.00 30.10 3.91
419 420 5.047164 ACATATGCATTCCAAAACAGAAGCA 60.047 36.000 3.54 0.00 34.35 3.91
420 421 5.413499 ACATATGCATTCCAAAACAGAAGC 58.587 37.500 3.54 0.00 0.00 3.86
421 422 6.869913 ACAACATATGCATTCCAAAACAGAAG 59.130 34.615 3.54 0.00 0.00 2.85
422 423 6.757237 ACAACATATGCATTCCAAAACAGAA 58.243 32.000 3.54 0.00 0.00 3.02
423 424 6.343716 ACAACATATGCATTCCAAAACAGA 57.656 33.333 3.54 0.00 0.00 3.41
424 425 7.041916 ACAAACAACATATGCATTCCAAAACAG 60.042 33.333 3.54 0.00 0.00 3.16
425 426 6.765036 ACAAACAACATATGCATTCCAAAACA 59.235 30.769 3.54 0.00 0.00 2.83
426 427 7.070798 CACAAACAACATATGCATTCCAAAAC 58.929 34.615 3.54 0.00 0.00 2.43
427 428 6.293298 GCACAAACAACATATGCATTCCAAAA 60.293 34.615 3.54 0.00 36.30 2.44
428 429 5.178996 GCACAAACAACATATGCATTCCAAA 59.821 36.000 3.54 0.00 36.30 3.28
429 430 4.689812 GCACAAACAACATATGCATTCCAA 59.310 37.500 3.54 0.00 36.30 3.53
430 431 4.244066 GCACAAACAACATATGCATTCCA 58.756 39.130 3.54 0.00 36.30 3.53
431 432 3.304026 CGCACAAACAACATATGCATTCC 59.696 43.478 3.54 0.00 36.02 3.01
432 433 4.165036 TCGCACAAACAACATATGCATTC 58.835 39.130 3.54 0.00 36.02 2.67
433 434 4.082841 TCTCGCACAAACAACATATGCATT 60.083 37.500 3.54 0.00 36.02 3.56
434 435 3.439825 TCTCGCACAAACAACATATGCAT 59.560 39.130 3.79 3.79 36.02 3.96
435 436 2.810852 TCTCGCACAAACAACATATGCA 59.189 40.909 1.58 0.00 36.02 3.96
436 437 3.120199 ACTCTCGCACAAACAACATATGC 60.120 43.478 1.58 0.00 0.00 3.14
437 438 4.641954 GACTCTCGCACAAACAACATATG 58.358 43.478 0.00 0.00 0.00 1.78
438 439 3.367932 CGACTCTCGCACAAACAACATAT 59.632 43.478 0.00 0.00 31.14 1.78
439 440 2.729360 CGACTCTCGCACAAACAACATA 59.271 45.455 0.00 0.00 31.14 2.29
440 441 1.526887 CGACTCTCGCACAAACAACAT 59.473 47.619 0.00 0.00 31.14 2.71
441 442 0.927537 CGACTCTCGCACAAACAACA 59.072 50.000 0.00 0.00 31.14 3.33
442 443 3.710233 CGACTCTCGCACAAACAAC 57.290 52.632 0.00 0.00 31.14 3.32
460 461 3.307262 CTAAAATGCAGCGCGCGC 61.307 61.111 45.10 45.10 46.97 6.86
461 462 3.307262 GCTAAAATGCAGCGCGCG 61.307 61.111 28.44 28.44 46.97 6.86
466 467 2.951227 GCCGCGCTAAAATGCAGC 60.951 61.111 5.56 0.00 35.61 5.25
467 468 1.584483 CAGCCGCGCTAAAATGCAG 60.584 57.895 5.56 0.00 36.40 4.41
468 469 2.484662 CAGCCGCGCTAAAATGCA 59.515 55.556 5.56 0.00 36.40 3.96
469 470 2.951227 GCAGCCGCGCTAAAATGC 60.951 61.111 5.56 4.97 36.40 3.56
470 471 1.584483 CAGCAGCCGCGCTAAAATG 60.584 57.895 5.56 0.00 45.49 2.32
471 472 2.764314 CCAGCAGCCGCGCTAAAAT 61.764 57.895 5.56 0.00 45.49 1.82
472 473 3.430862 CCAGCAGCCGCGCTAAAA 61.431 61.111 5.56 0.00 45.49 1.52
473 474 4.386951 TCCAGCAGCCGCGCTAAA 62.387 61.111 5.56 0.00 45.49 1.85
474 475 4.819761 CTCCAGCAGCCGCGCTAA 62.820 66.667 5.56 1.87 45.49 3.09
501 502 4.817063 CTGATTTGGCACGGCGCG 62.817 66.667 6.90 0.00 43.84 6.86
502 503 3.430862 TCTGATTTGGCACGGCGC 61.431 61.111 6.90 0.00 41.28 6.53
503 504 2.480555 GTCTGATTTGGCACGGCG 59.519 61.111 4.80 4.80 0.00 6.46
504 505 1.369091 ATCGTCTGATTTGGCACGGC 61.369 55.000 0.00 0.00 33.02 5.68
505 506 0.374758 CATCGTCTGATTTGGCACGG 59.625 55.000 0.00 0.00 30.49 4.94
506 507 0.374758 CCATCGTCTGATTTGGCACG 59.625 55.000 0.00 0.00 30.49 5.34
507 508 0.734889 CCCATCGTCTGATTTGGCAC 59.265 55.000 0.00 0.00 30.49 5.01
508 509 1.031571 GCCCATCGTCTGATTTGGCA 61.032 55.000 9.53 0.00 44.17 4.92
509 510 1.729881 GCCCATCGTCTGATTTGGC 59.270 57.895 0.00 0.00 40.69 4.52
510 511 2.016961 CGCCCATCGTCTGATTTGG 58.983 57.895 0.00 0.00 30.49 3.28
511 512 1.353103 GCGCCCATCGTCTGATTTG 59.647 57.895 0.00 0.00 41.07 2.32
512 513 1.078497 TGCGCCCATCGTCTGATTT 60.078 52.632 4.18 0.00 41.07 2.17
513 514 1.815421 GTGCGCCCATCGTCTGATT 60.815 57.895 4.18 0.00 41.07 2.57
514 515 2.202932 GTGCGCCCATCGTCTGAT 60.203 61.111 4.18 0.00 41.07 2.90
515 516 4.794439 CGTGCGCCCATCGTCTGA 62.794 66.667 4.18 0.00 41.07 3.27
517 518 4.796231 GACGTGCGCCCATCGTCT 62.796 66.667 25.23 5.98 46.54 4.18
519 520 4.673298 TTGACGTGCGCCCATCGT 62.673 61.111 4.18 10.91 41.07 3.73
520 521 2.960512 TTTTGACGTGCGCCCATCG 61.961 57.895 4.18 7.41 42.12 3.84
521 522 1.442017 GTTTTGACGTGCGCCCATC 60.442 57.895 4.18 0.00 0.00 3.51
522 523 2.128853 CTGTTTTGACGTGCGCCCAT 62.129 55.000 4.18 0.00 0.00 4.00
523 524 2.824489 TGTTTTGACGTGCGCCCA 60.824 55.556 4.18 0.00 0.00 5.36
524 525 2.051345 CTGTTTTGACGTGCGCCC 60.051 61.111 4.18 0.00 0.00 6.13
525 526 0.524604 AAACTGTTTTGACGTGCGCC 60.525 50.000 4.18 0.00 0.00 6.53
526 527 1.264672 AAAACTGTTTTGACGTGCGC 58.735 45.000 17.06 0.00 0.00 6.09
527 528 3.062124 GCTAAAAACTGTTTTGACGTGCG 60.062 43.478 18.33 1.42 37.51 5.34
528 529 3.062124 CGCTAAAAACTGTTTTGACGTGC 60.062 43.478 18.33 15.41 37.51 5.34
529 530 3.062124 GCGCTAAAAACTGTTTTGACGTG 60.062 43.478 23.84 18.96 37.51 4.49
530 531 3.103007 GCGCTAAAAACTGTTTTGACGT 58.897 40.909 23.84 12.47 37.51 4.34
531 532 2.148569 CGCGCTAAAAACTGTTTTGACG 59.851 45.455 18.33 20.12 37.51 4.35
532 533 2.098068 GCGCGCTAAAAACTGTTTTGAC 60.098 45.455 26.67 10.27 37.51 3.18
533 534 2.113289 GCGCGCTAAAAACTGTTTTGA 58.887 42.857 26.67 10.75 37.51 2.69
534 535 1.137287 CGCGCGCTAAAAACTGTTTTG 60.137 47.619 30.48 8.78 37.51 2.44
535 536 1.117234 CGCGCGCTAAAAACTGTTTT 58.883 45.000 30.48 12.50 40.15 2.43
536 537 0.028374 ACGCGCGCTAAAAACTGTTT 59.972 45.000 32.58 1.37 0.00 2.83
537 538 0.383860 GACGCGCGCTAAAAACTGTT 60.384 50.000 32.58 5.00 0.00 3.16
538 539 1.203313 GACGCGCGCTAAAAACTGT 59.797 52.632 32.58 16.85 0.00 3.55
539 540 1.853192 CGACGCGCGCTAAAAACTG 60.853 57.895 32.58 13.34 0.00 3.16
540 541 2.468532 CGACGCGCGCTAAAAACT 59.531 55.556 32.58 7.51 0.00 2.66
558 559 2.421877 ATCTCCAATAGGCGCCGACG 62.422 60.000 23.20 10.94 44.07 5.12
559 560 0.946221 CATCTCCAATAGGCGCCGAC 60.946 60.000 23.20 0.00 33.74 4.79
560 561 1.367471 CATCTCCAATAGGCGCCGA 59.633 57.895 23.20 18.26 33.74 5.54
561 562 2.320587 GCATCTCCAATAGGCGCCG 61.321 63.158 23.20 6.32 33.74 6.46
562 563 0.952984 GAGCATCTCCAATAGGCGCC 60.953 60.000 21.89 21.89 33.74 6.53
563 564 2.537863 GAGCATCTCCAATAGGCGC 58.462 57.895 0.00 0.00 33.74 6.53
575 576 3.262420 TCGCTGGTTTTCTTAGAGCATC 58.738 45.455 0.00 0.00 0.00 3.91
576 577 3.334583 TCGCTGGTTTTCTTAGAGCAT 57.665 42.857 0.00 0.00 0.00 3.79
577 578 2.831685 TCGCTGGTTTTCTTAGAGCA 57.168 45.000 0.00 0.00 0.00 4.26
578 579 3.262420 TCATCGCTGGTTTTCTTAGAGC 58.738 45.455 0.00 0.00 0.00 4.09
579 580 5.409826 AGTTTCATCGCTGGTTTTCTTAGAG 59.590 40.000 0.00 0.00 0.00 2.43
580 581 5.305585 AGTTTCATCGCTGGTTTTCTTAGA 58.694 37.500 0.00 0.00 0.00 2.10
635 643 0.773644 AAGGTTGGGTCTCAGCATGT 59.226 50.000 0.00 0.00 37.40 3.21
636 644 1.271543 TGAAGGTTGGGTCTCAGCATG 60.272 52.381 0.00 0.00 37.54 4.06
637 645 1.067295 TGAAGGTTGGGTCTCAGCAT 58.933 50.000 0.00 0.00 0.00 3.79
638 646 0.108585 GTGAAGGTTGGGTCTCAGCA 59.891 55.000 0.00 0.00 0.00 4.41
639 647 0.108585 TGTGAAGGTTGGGTCTCAGC 59.891 55.000 0.00 0.00 0.00 4.26
640 648 1.879796 GCTGTGAAGGTTGGGTCTCAG 60.880 57.143 0.00 0.00 38.05 3.35
643 651 1.071471 CGCTGTGAAGGTTGGGTCT 59.929 57.895 0.00 0.00 0.00 3.85
655 665 0.792640 ACGAGATTTGCTTCGCTGTG 59.207 50.000 0.00 0.00 0.00 3.66
671 681 3.558505 GACACGAAGCAAAGTACTACGA 58.441 45.455 0.00 0.00 0.00 3.43
673 683 3.303406 ACGACACGAAGCAAAGTACTAC 58.697 45.455 0.00 0.00 0.00 2.73
674 684 3.558505 GACGACACGAAGCAAAGTACTA 58.441 45.455 0.00 0.00 0.00 1.82
675 685 2.391879 GACGACACGAAGCAAAGTACT 58.608 47.619 0.00 0.00 0.00 2.73
676 686 1.454653 GGACGACACGAAGCAAAGTAC 59.545 52.381 0.00 0.00 0.00 2.73
901 911 2.279517 GTCTATGGCGTGGCGAGG 60.280 66.667 0.00 0.00 0.00 4.63
903 913 3.845259 GGGTCTATGGCGTGGCGA 61.845 66.667 0.00 0.00 0.00 5.54
1006 1018 0.704664 GATGGGGAAAACTCTGGGGT 59.295 55.000 0.00 0.00 0.00 4.95
1008 1020 0.033109 GGGATGGGGAAAACTCTGGG 60.033 60.000 0.00 0.00 0.00 4.45
1029 1041 2.448577 GGGAGATGGGATTTGGGAGATT 59.551 50.000 0.00 0.00 0.00 2.40
1030 1042 2.068977 GGGAGATGGGATTTGGGAGAT 58.931 52.381 0.00 0.00 0.00 2.75
1031 1043 1.274943 TGGGAGATGGGATTTGGGAGA 60.275 52.381 0.00 0.00 0.00 3.71
1044 1056 1.211457 AGATCGCTTTGCTTGGGAGAT 59.789 47.619 0.00 0.00 0.00 2.75
1607 1627 5.298276 TCAAACATCCACACTACAAAGGAAC 59.702 40.000 0.00 0.00 33.17 3.62
1805 1825 5.885230 TCCATGAGCAACAAGTTAATGAG 57.115 39.130 0.00 0.00 0.00 2.90
1819 1839 5.717119 AGAAATCAACAAACATCCATGAGC 58.283 37.500 0.00 0.00 0.00 4.26
1847 1867 6.680810 TGAACTAAATTTCTCAAGCATGTGG 58.319 36.000 0.00 0.00 0.00 4.17
1858 1878 3.825908 TGGGGCCTGAACTAAATTTCT 57.174 42.857 0.84 0.00 0.00 2.52
1865 1885 0.551377 TTCCCATGGGGCCTGAACTA 60.551 55.000 30.93 4.76 43.94 2.24
1886 1922 3.723835 GCAACTAAACACGCACTATTCCG 60.724 47.826 0.00 0.00 0.00 4.30
1919 1955 2.303175 AGCCAGAGACTCGATACCTTC 58.697 52.381 0.00 0.00 0.00 3.46
1949 1985 2.832201 GGCAAGCATCTGGGGCTC 60.832 66.667 0.00 0.00 41.66 4.70
1951 1987 2.363406 AAGGCAAGCATCTGGGGC 60.363 61.111 0.00 0.00 0.00 5.80
1985 2021 5.452078 ACATTCGCCAAAGAAATCTTGAA 57.548 34.783 0.00 0.00 36.12 2.69
1994 2030 6.081049 CGTAATAACAAACATTCGCCAAAGA 58.919 36.000 0.00 0.00 0.00 2.52
1995 2031 5.285134 CCGTAATAACAAACATTCGCCAAAG 59.715 40.000 0.00 0.00 0.00 2.77
2002 2038 7.140048 TCAAACCACCGTAATAACAAACATTC 58.860 34.615 0.00 0.00 0.00 2.67
2023 2059 5.131809 AGACCCAAACCAATTTCCATTCAAA 59.868 36.000 0.00 0.00 0.00 2.69
2031 2067 4.040339 ACATTCCAGACCCAAACCAATTTC 59.960 41.667 0.00 0.00 0.00 2.17
2088 2124 6.775594 ACTAGAATCACCCAATAAAAAGCC 57.224 37.500 0.00 0.00 0.00 4.35
2110 2146 7.642082 TTACAAGTCTCTCCCACTATAGAAC 57.358 40.000 6.78 0.00 0.00 3.01
2122 2159 9.654663 AATGGTACTGTAAATTACAAGTCTCTC 57.345 33.333 7.30 0.00 38.38 3.20
2314 2359 9.733556 TCAATAGCTAAAATGGAAGTTACAGAA 57.266 29.630 0.00 0.00 0.00 3.02
2315 2360 9.905713 ATCAATAGCTAAAATGGAAGTTACAGA 57.094 29.630 0.00 0.00 0.00 3.41
2380 2425 2.032377 TCAAGCAACAACGAACGAATCC 60.032 45.455 0.14 0.00 0.00 3.01
2389 2434 2.191802 TGCAAACATCAAGCAACAACG 58.808 42.857 0.00 0.00 34.97 4.10
2481 2526 7.652105 GCATCAGCAATTCATCATTTACTGATT 59.348 33.333 0.00 0.00 40.85 2.57
2489 2534 7.553334 ACTTAAAGCATCAGCAATTCATCATT 58.447 30.769 0.00 0.00 45.49 2.57
2533 2579 5.215160 ACACTTTGATCAAATTTCGTCAGC 58.785 37.500 20.76 0.00 0.00 4.26
2568 2616 3.058432 CAGCAACAACATGAGAACAGAGG 60.058 47.826 0.00 0.00 0.00 3.69
2569 2617 3.562973 ACAGCAACAACATGAGAACAGAG 59.437 43.478 0.00 0.00 0.00 3.35
2574 2622 1.872952 CGGACAGCAACAACATGAGAA 59.127 47.619 0.00 0.00 0.00 2.87
2610 2658 0.621571 AGATACTTGAGGGGGCAGCA 60.622 55.000 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.