Multiple sequence alignment - TraesCS6D01G277000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G277000 chr6D 100.000 3450 0 0 1 3450 385701843 385698394 0.000000e+00 6372
1 TraesCS6D01G277000 chr6B 93.336 2341 102 21 570 2877 576208166 576205847 0.000000e+00 3410
2 TraesCS6D01G277000 chr6B 94.619 223 8 2 350 569 576209491 576209270 3.300000e-90 342
3 TraesCS6D01G277000 chr6B 89.754 244 24 1 2917 3160 576205844 576205602 9.300000e-81 311
4 TraesCS6D01G277000 chr6B 90.780 141 13 0 86 226 347552172 347552032 4.550000e-44 189
5 TraesCS6D01G277000 chr6B 95.588 68 3 0 266 333 576209929 576209862 3.640000e-20 110
6 TraesCS6D01G277000 chr6B 95.455 66 3 0 5 70 8056300 8056365 4.710000e-19 106
7 TraesCS6D01G277000 chr6A 93.760 1923 68 21 686 2586 530217807 530215915 0.000000e+00 2839
8 TraesCS6D01G277000 chr6A 88.323 471 28 11 232 691 530218447 530217993 1.090000e-149 540
9 TraesCS6D01G277000 chr6A 91.034 145 11 1 86 228 578884707 578884563 9.770000e-46 195
10 TraesCS6D01G277000 chr6A 97.015 67 2 0 2 68 11536597 11536663 2.810000e-21 113
11 TraesCS6D01G277000 chr6A 92.000 75 4 2 5 77 443418442 443418368 1.690000e-18 104
12 TraesCS6D01G277000 chr7D 94.521 146 7 1 86 231 559223739 559223883 1.250000e-54 224
13 TraesCS6D01G277000 chr7D 90.698 86 6 1 3077 3160 167701635 167701550 2.810000e-21 113
14 TraesCS6D01G277000 chr5D 93.151 146 8 1 85 228 341074798 341074653 2.700000e-51 213
15 TraesCS6D01G277000 chr2D 93.103 145 8 1 86 228 568410964 568411108 9.700000e-51 211
16 TraesCS6D01G277000 chr2D 91.156 147 9 1 86 228 151981188 151981042 2.720000e-46 196
17 TraesCS6D01G277000 chr2D 96.970 66 2 0 5 70 568410819 568410884 1.010000e-20 111
18 TraesCS6D01G277000 chr5B 78.779 344 49 12 2818 3160 224339188 224338868 3.490000e-50 209
19 TraesCS6D01G277000 chr7A 90.541 148 12 1 86 231 637871167 637871020 9.770000e-46 195
20 TraesCS6D01G277000 chr7A 95.714 70 3 0 5 74 15693800 15693731 2.810000e-21 113
21 TraesCS6D01G277000 chr7A 92.958 71 4 1 5 74 637871324 637871254 6.090000e-18 102
22 TraesCS6D01G277000 chr4A 90.066 151 10 3 86 231 584676348 584676498 1.260000e-44 191
23 TraesCS6D01G277000 chr4A 92.647 68 5 0 5 72 741186457 741186390 7.880000e-17 99
24 TraesCS6D01G277000 chr3B 90.345 145 12 1 86 228 705591343 705591487 4.550000e-44 189
25 TraesCS6D01G277000 chr2A 96.970 66 2 0 5 70 53613377 53613312 1.010000e-20 111
26 TraesCS6D01G277000 chr3A 95.455 66 3 0 5 70 661837568 661837503 4.710000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G277000 chr6D 385698394 385701843 3449 True 6372.00 6372 100.00000 1 3450 1 chr6D.!!$R1 3449
1 TraesCS6D01G277000 chr6B 576205602 576209929 4327 True 1043.25 3410 93.32425 266 3160 4 chr6B.!!$R2 2894
2 TraesCS6D01G277000 chr6A 530215915 530218447 2532 True 1689.50 2839 91.04150 232 2586 2 chr6A.!!$R3 2354

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
195 196 0.095762 GCAGTTTTTATACCGCGCGT 59.904 50.0 29.95 18.85 0.00 6.01 F
197 198 0.641783 AGTTTTTATACCGCGCGTCG 59.358 50.0 29.95 17.12 38.08 5.12 F
919 2590 0.649475 CATTCTCTGCTGCAGTACGC 59.351 55.0 27.24 1.48 42.89 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1153 2824 0.595588 TTTGCGTGCGGATCAATGTT 59.404 45.000 0.0 0.0 0.0 2.71 R
1156 2827 1.134487 CGTTTGCGTGCGGATCAAT 59.866 52.632 0.0 0.0 0.0 2.57 R
2899 4603 0.379316 GCCGACCGTTGACTTTGTTT 59.621 50.000 0.0 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.288961 TTTTAGGGCGCTAGAAGACG 57.711 50.000 7.64 0.00 0.00 4.18
35 36 1.180029 TTTAGGGCGCTAGAAGACGT 58.820 50.000 7.64 0.00 0.00 4.34
36 37 1.180029 TTAGGGCGCTAGAAGACGTT 58.820 50.000 7.64 0.00 0.00 3.99
37 38 1.180029 TAGGGCGCTAGAAGACGTTT 58.820 50.000 7.64 0.00 0.00 3.60
38 39 0.389948 AGGGCGCTAGAAGACGTTTG 60.390 55.000 7.64 0.00 0.00 2.93
39 40 1.420312 GGCGCTAGAAGACGTTTGC 59.580 57.895 7.64 0.00 0.00 3.68
40 41 1.014564 GGCGCTAGAAGACGTTTGCT 61.015 55.000 7.64 0.00 0.00 3.91
41 42 0.367210 GCGCTAGAAGACGTTTGCTC 59.633 55.000 0.00 0.00 0.00 4.26
42 43 0.992802 CGCTAGAAGACGTTTGCTCC 59.007 55.000 0.00 0.00 0.00 4.70
43 44 1.668919 CGCTAGAAGACGTTTGCTCCA 60.669 52.381 0.00 0.00 0.00 3.86
44 45 2.413837 GCTAGAAGACGTTTGCTCCAA 58.586 47.619 0.00 0.00 0.00 3.53
45 46 2.157863 GCTAGAAGACGTTTGCTCCAAC 59.842 50.000 0.00 0.00 0.00 3.77
46 47 2.325583 AGAAGACGTTTGCTCCAACA 57.674 45.000 0.00 0.00 0.00 3.33
47 48 2.639065 AGAAGACGTTTGCTCCAACAA 58.361 42.857 0.00 0.00 0.00 2.83
48 49 3.013921 AGAAGACGTTTGCTCCAACAAA 58.986 40.909 0.00 0.00 37.20 2.83
52 53 3.641031 GTTTGCTCCAACAAACGCT 57.359 47.368 4.57 0.00 46.95 5.07
53 54 1.199624 GTTTGCTCCAACAAACGCTG 58.800 50.000 4.57 0.00 46.95 5.18
54 55 0.814457 TTTGCTCCAACAAACGCTGT 59.186 45.000 0.00 0.00 41.27 4.40
55 56 1.669604 TTGCTCCAACAAACGCTGTA 58.330 45.000 0.00 0.00 37.23 2.74
56 57 1.669604 TGCTCCAACAAACGCTGTAA 58.330 45.000 0.00 0.00 37.23 2.41
57 58 2.017782 TGCTCCAACAAACGCTGTAAA 58.982 42.857 0.00 0.00 37.23 2.01
58 59 2.423892 TGCTCCAACAAACGCTGTAAAA 59.576 40.909 0.00 0.00 37.23 1.52
59 60 3.067461 TGCTCCAACAAACGCTGTAAAAT 59.933 39.130 0.00 0.00 37.23 1.82
60 61 4.276183 TGCTCCAACAAACGCTGTAAAATA 59.724 37.500 0.00 0.00 37.23 1.40
61 62 5.048364 TGCTCCAACAAACGCTGTAAAATAT 60.048 36.000 0.00 0.00 37.23 1.28
62 63 5.286082 GCTCCAACAAACGCTGTAAAATATG 59.714 40.000 0.00 0.00 37.23 1.78
63 64 6.320494 TCCAACAAACGCTGTAAAATATGT 57.680 33.333 0.00 0.00 37.23 2.29
64 65 6.740110 TCCAACAAACGCTGTAAAATATGTT 58.260 32.000 0.00 0.00 37.23 2.71
65 66 6.638873 TCCAACAAACGCTGTAAAATATGTTG 59.361 34.615 8.01 8.01 43.53 3.33
66 67 6.288419 CAACAAACGCTGTAAAATATGTTGC 58.712 36.000 0.00 0.00 39.66 4.17
67 68 4.615121 ACAAACGCTGTAAAATATGTTGCG 59.385 37.500 7.16 7.16 46.02 4.85
68 69 2.780993 ACGCTGTAAAATATGTTGCGC 58.219 42.857 0.00 0.00 44.73 6.09
69 70 1.767405 CGCTGTAAAATATGTTGCGCG 59.233 47.619 14.45 14.45 35.77 6.86
70 71 2.780993 GCTGTAAAATATGTTGCGCGT 58.219 42.857 8.43 0.00 0.00 6.01
71 72 2.525891 GCTGTAAAATATGTTGCGCGTG 59.474 45.455 8.43 0.00 0.00 5.34
72 73 3.726486 GCTGTAAAATATGTTGCGCGTGA 60.726 43.478 8.43 0.00 0.00 4.35
73 74 3.997276 TGTAAAATATGTTGCGCGTGAG 58.003 40.909 8.43 0.00 0.00 3.51
74 75 2.542766 AAAATATGTTGCGCGTGAGG 57.457 45.000 8.43 0.00 0.00 3.86
75 76 0.098728 AAATATGTTGCGCGTGAGGC 59.901 50.000 8.43 0.00 38.69 4.70
76 77 1.024046 AATATGTTGCGCGTGAGGCA 61.024 50.000 8.43 0.39 43.84 4.75
77 78 1.705337 ATATGTTGCGCGTGAGGCAC 61.705 55.000 8.43 0.00 43.84 5.01
79 80 2.736995 GTTGCGCGTGAGGCACTA 60.737 61.111 8.43 0.00 41.55 2.74
80 81 2.029815 TTGCGCGTGAGGCACTAA 59.970 55.556 8.43 0.00 41.55 2.24
81 82 1.595655 TTGCGCGTGAGGCACTAAA 60.596 52.632 8.43 0.00 41.55 1.85
82 83 0.953471 TTGCGCGTGAGGCACTAAAT 60.953 50.000 8.43 0.00 41.55 1.40
83 84 0.108567 TGCGCGTGAGGCACTAAATA 60.109 50.000 8.43 0.00 41.55 1.40
84 85 1.217882 GCGCGTGAGGCACTAAATAT 58.782 50.000 8.43 0.00 41.55 1.28
85 86 2.223852 TGCGCGTGAGGCACTAAATATA 60.224 45.455 8.43 0.00 41.55 0.86
86 87 2.993899 GCGCGTGAGGCACTAAATATAT 59.006 45.455 8.43 0.00 41.55 0.86
87 88 3.181530 GCGCGTGAGGCACTAAATATATG 60.182 47.826 8.43 0.00 41.55 1.78
88 89 3.181530 CGCGTGAGGCACTAAATATATGC 60.182 47.826 0.00 0.00 41.55 3.14
89 90 3.997021 GCGTGAGGCACTAAATATATGCT 59.003 43.478 0.00 0.00 41.55 3.79
90 91 4.452455 GCGTGAGGCACTAAATATATGCTT 59.548 41.667 0.00 0.00 41.55 3.91
91 92 5.049405 GCGTGAGGCACTAAATATATGCTTT 60.049 40.000 0.00 0.00 41.55 3.51
92 93 6.513393 GCGTGAGGCACTAAATATATGCTTTT 60.513 38.462 0.00 0.00 41.55 2.27
93 94 7.417612 CGTGAGGCACTAAATATATGCTTTTT 58.582 34.615 0.00 0.00 41.55 1.94
115 116 4.520846 GCGCGCGCTGCATTAGTT 62.521 61.111 44.38 0.00 46.97 2.24
116 117 3.002673 CGCGCGCTGCATTAGTTA 58.997 55.556 30.48 0.00 46.97 2.24
117 118 1.564622 CGCGCGCTGCATTAGTTAT 59.435 52.632 30.48 0.00 46.97 1.89
118 119 0.781787 CGCGCGCTGCATTAGTTATA 59.218 50.000 30.48 0.00 46.97 0.98
119 120 1.201704 CGCGCGCTGCATTAGTTATAG 60.202 52.381 30.48 3.74 46.97 1.31
120 121 1.462541 GCGCGCTGCATTAGTTATAGC 60.463 52.381 26.67 0.00 45.45 2.97
124 125 3.174799 GCTGCATTAGTTATAGCGTGC 57.825 47.619 0.00 7.38 0.00 5.34
125 126 2.410262 GCTGCATTAGTTATAGCGTGCG 60.410 50.000 0.00 0.00 35.46 5.34
126 127 1.525197 TGCATTAGTTATAGCGTGCGC 59.475 47.619 8.67 8.67 42.33 6.09
136 137 4.145052 GCGTGCGCTTTTTATGCA 57.855 50.000 9.73 0.00 38.26 3.96
137 138 1.983160 GCGTGCGCTTTTTATGCAG 59.017 52.632 9.73 0.00 39.67 4.41
138 139 1.983160 CGTGCGCTTTTTATGCAGC 59.017 52.632 9.73 0.00 39.67 5.25
139 140 0.454957 CGTGCGCTTTTTATGCAGCT 60.455 50.000 9.73 0.00 39.67 4.24
140 141 0.986992 GTGCGCTTTTTATGCAGCTG 59.013 50.000 10.11 10.11 39.67 4.24
141 142 0.733566 TGCGCTTTTTATGCAGCTGC 60.734 50.000 31.89 31.89 42.50 5.25
142 143 0.457337 GCGCTTTTTATGCAGCTGCT 60.457 50.000 36.61 24.48 42.66 4.24
143 144 1.265568 CGCTTTTTATGCAGCTGCTG 58.734 50.000 36.61 24.80 42.66 4.41
144 145 1.636988 GCTTTTTATGCAGCTGCTGG 58.363 50.000 36.61 19.21 42.66 4.85
145 146 1.203052 GCTTTTTATGCAGCTGCTGGA 59.797 47.619 36.61 27.54 42.66 3.86
146 147 2.734492 GCTTTTTATGCAGCTGCTGGAG 60.734 50.000 36.61 24.35 42.66 3.86
147 148 2.495155 TTTTATGCAGCTGCTGGAGA 57.505 45.000 36.61 22.31 42.66 3.71
148 149 1.742761 TTTATGCAGCTGCTGGAGAC 58.257 50.000 36.61 14.03 42.66 3.36
149 150 0.907486 TTATGCAGCTGCTGGAGACT 59.093 50.000 36.61 15.40 42.66 3.24
150 151 0.463204 TATGCAGCTGCTGGAGACTC 59.537 55.000 36.61 12.98 42.66 3.36
151 152 2.125188 GCAGCTGCTGGAGACTCC 60.125 66.667 31.33 15.13 38.21 3.85
152 153 2.952293 GCAGCTGCTGGAGACTCCA 61.952 63.158 31.33 22.97 45.98 3.86
160 161 3.082619 TGGAGACTCCAAATCGGGT 57.917 52.632 22.30 0.00 45.00 5.28
161 162 0.902531 TGGAGACTCCAAATCGGGTC 59.097 55.000 22.30 0.00 45.00 4.46
162 163 0.178301 GGAGACTCCAAATCGGGTCC 59.822 60.000 17.10 0.00 36.26 4.46
163 164 0.179108 GAGACTCCAAATCGGGTCCG 60.179 60.000 2.52 2.52 36.26 4.79
164 165 1.814169 GACTCCAAATCGGGTCCGC 60.814 63.158 4.27 0.00 39.59 5.54
165 166 2.267642 CTCCAAATCGGGTCCGCA 59.732 61.111 4.27 0.00 39.59 5.69
166 167 2.046700 TCCAAATCGGGTCCGCAC 60.047 61.111 4.27 0.00 39.59 5.34
167 168 3.496131 CCAAATCGGGTCCGCACG 61.496 66.667 4.27 0.00 44.11 5.34
168 169 4.160635 CAAATCGGGTCCGCACGC 62.161 66.667 4.27 0.00 42.13 5.34
175 176 3.416382 GGTCCGCACGCGCTAAAA 61.416 61.111 5.73 0.00 38.24 1.52
176 177 2.095843 GTCCGCACGCGCTAAAAG 59.904 61.111 5.73 0.00 38.24 2.27
177 178 3.784412 TCCGCACGCGCTAAAAGC 61.784 61.111 5.73 0.00 38.02 3.51
178 179 4.083600 CCGCACGCGCTAAAAGCA 62.084 61.111 5.73 0.00 42.58 3.91
179 180 2.571611 CGCACGCGCTAAAAGCAG 60.572 61.111 5.73 0.00 42.58 4.24
180 181 2.556287 GCACGCGCTAAAAGCAGT 59.444 55.556 5.73 0.00 42.58 4.40
181 182 1.082104 GCACGCGCTAAAAGCAGTT 60.082 52.632 5.73 0.00 42.58 3.16
182 183 0.660300 GCACGCGCTAAAAGCAGTTT 60.660 50.000 5.73 0.00 42.58 2.66
183 184 1.753956 CACGCGCTAAAAGCAGTTTT 58.246 45.000 5.73 0.00 42.58 2.43
184 185 2.116366 CACGCGCTAAAAGCAGTTTTT 58.884 42.857 5.73 0.28 42.58 1.94
185 186 3.293262 CACGCGCTAAAAGCAGTTTTTA 58.707 40.909 5.73 2.57 42.58 1.52
186 187 3.911964 CACGCGCTAAAAGCAGTTTTTAT 59.088 39.130 5.73 0.00 42.58 1.40
187 188 5.083389 CACGCGCTAAAAGCAGTTTTTATA 58.917 37.500 5.73 0.00 42.58 0.98
188 189 5.002189 CACGCGCTAAAAGCAGTTTTTATAC 59.998 40.000 5.73 0.00 42.58 1.47
189 190 4.494410 CGCGCTAAAAGCAGTTTTTATACC 59.506 41.667 5.56 0.00 42.58 2.73
190 191 4.494410 GCGCTAAAAGCAGTTTTTATACCG 59.506 41.667 0.00 7.48 42.58 4.02
191 192 4.494410 CGCTAAAAGCAGTTTTTATACCGC 59.506 41.667 2.95 2.96 42.58 5.68
192 193 4.494410 GCTAAAAGCAGTTTTTATACCGCG 59.506 41.667 0.00 0.00 41.89 6.46
193 194 2.537639 AAGCAGTTTTTATACCGCGC 57.462 45.000 0.00 0.00 0.00 6.86
194 195 0.372334 AGCAGTTTTTATACCGCGCG 59.628 50.000 25.67 25.67 0.00 6.86
195 196 0.095762 GCAGTTTTTATACCGCGCGT 59.904 50.000 29.95 18.85 0.00 6.01
196 197 1.849348 GCAGTTTTTATACCGCGCGTC 60.849 52.381 29.95 7.02 0.00 5.19
197 198 0.641783 AGTTTTTATACCGCGCGTCG 59.358 50.000 29.95 17.12 38.08 5.12
217 218 3.310303 GCTTATGTAGCGCTTCTGTTG 57.690 47.619 18.68 3.84 40.71 3.33
218 219 2.030946 GCTTATGTAGCGCTTCTGTTGG 59.969 50.000 18.68 2.18 40.71 3.77
219 220 3.521560 CTTATGTAGCGCTTCTGTTGGA 58.478 45.455 18.68 0.00 0.00 3.53
220 221 2.015736 ATGTAGCGCTTCTGTTGGAG 57.984 50.000 18.68 0.00 0.00 3.86
221 222 0.966179 TGTAGCGCTTCTGTTGGAGA 59.034 50.000 18.68 0.00 0.00 3.71
222 223 1.550524 TGTAGCGCTTCTGTTGGAGAT 59.449 47.619 18.68 0.00 0.00 2.75
223 224 1.929836 GTAGCGCTTCTGTTGGAGATG 59.070 52.381 18.68 0.00 0.00 2.90
224 225 1.023513 AGCGCTTCTGTTGGAGATGC 61.024 55.000 2.64 0.00 44.71 3.91
225 226 1.023513 GCGCTTCTGTTGGAGATGCT 61.024 55.000 0.00 0.00 45.55 3.79
226 227 1.005340 CGCTTCTGTTGGAGATGCTC 58.995 55.000 0.00 0.00 45.55 4.26
227 228 1.405256 CGCTTCTGTTGGAGATGCTCT 60.405 52.381 0.00 0.00 45.55 4.09
228 229 2.159184 CGCTTCTGTTGGAGATGCTCTA 60.159 50.000 0.00 0.00 45.55 2.43
229 230 3.677148 CGCTTCTGTTGGAGATGCTCTAA 60.677 47.826 0.00 0.00 45.55 2.10
241 242 5.004922 AGATGCTCTAACTGTGACTAAGC 57.995 43.478 0.00 0.00 0.00 3.09
319 320 5.238650 AGTTATGTGGGAGAAACTTGTTTCG 59.761 40.000 17.19 0.00 36.14 3.46
326 327 4.254492 GGAGAAACTTGTTTCGCTCCTAT 58.746 43.478 22.21 5.98 36.46 2.57
454 810 9.203421 TCAGTACAGTATATCAGTGTTTTTGTG 57.797 33.333 0.00 0.00 41.25 3.33
503 859 2.945668 CAACTGTAAGGGGAGCTAATGC 59.054 50.000 0.00 0.00 39.30 3.56
584 2056 9.817809 AGTTATGCGATGAAGACTAGAAAAATA 57.182 29.630 0.00 0.00 0.00 1.40
588 2060 8.716646 TGCGATGAAGACTAGAAAAATATCAA 57.283 30.769 0.00 0.00 0.00 2.57
644 2117 5.811613 TGGCGTATTAATGCTAAAGTTACGT 59.188 36.000 0.00 0.00 37.78 3.57
703 2367 3.485463 TGTAACTTGGTGAGGGTGAAG 57.515 47.619 0.00 0.00 0.00 3.02
769 2433 8.457238 AGAGAAAATGGGCTTGAGATAATAAC 57.543 34.615 0.00 0.00 0.00 1.89
770 2434 7.503902 AGAGAAAATGGGCTTGAGATAATAACC 59.496 37.037 0.00 0.00 0.00 2.85
783 2447 9.474313 TTGAGATAATAACCTTTGTTGGCTATT 57.526 29.630 0.00 0.00 35.87 1.73
844 2511 6.048509 TGACTATGTAATGGCATGTGTACTG 58.951 40.000 0.00 0.00 0.00 2.74
863 2534 4.275810 ACTGGCTTTATCATCAGCAATGT 58.724 39.130 0.00 0.00 37.81 2.71
912 2583 4.627611 TGCTTATTTCATTCTCTGCTGC 57.372 40.909 0.00 0.00 0.00 5.25
915 2586 4.096081 GCTTATTTCATTCTCTGCTGCAGT 59.904 41.667 27.24 7.11 32.61 4.40
919 2590 0.649475 CATTCTCTGCTGCAGTACGC 59.351 55.000 27.24 1.48 42.89 4.42
1029 2700 1.998315 CAGACATTTGTGAGGCTCTCG 59.002 52.381 16.72 2.03 32.35 4.04
1117 2788 2.646175 CGAGGCTTCCCGGTTCAGA 61.646 63.158 0.00 0.00 35.76 3.27
1123 2794 1.808133 GCTTCCCGGTTCAGATAGCTG 60.808 57.143 0.24 0.24 43.67 4.24
1153 2824 4.717877 TCTGGCAAATTCTTCAGAGTTCA 58.282 39.130 0.00 0.00 33.07 3.18
1156 2827 4.644234 TGGCAAATTCTTCAGAGTTCAACA 59.356 37.500 0.00 0.00 0.00 3.33
1170 2841 0.952984 TCAACATTGATCCGCACGCA 60.953 50.000 0.00 0.00 31.01 5.24
1588 3260 3.619767 TGCTCCGCTGCTGACAGT 61.620 61.111 3.99 0.00 46.30 3.55
1614 3287 5.220381 CACTGCCATGATATGAAATTCTGC 58.780 41.667 0.00 0.00 0.00 4.26
1621 3294 7.064847 GCCATGATATGAAATTCTGCACAAAAA 59.935 33.333 0.00 0.00 0.00 1.94
1639 3312 5.824097 ACAAAAATGAATTGCCAGAAGCTTT 59.176 32.000 0.00 0.00 44.23 3.51
1658 3331 5.645497 AGCTTTATGAGGTTGTTGATGTCTC 59.355 40.000 0.00 0.00 30.17 3.36
1668 3341 5.879223 GGTTGTTGATGTCTCATCTCTGATT 59.121 40.000 10.40 0.00 0.00 2.57
1674 3347 5.353400 TGATGTCTCATCTCTGATTTGTTGC 59.647 40.000 10.40 0.00 0.00 4.17
1753 3430 1.507174 CGTGGAGAAGGAGACGGAC 59.493 63.158 0.00 0.00 0.00 4.79
2451 4128 0.375454 CTGGAGCTCGACACGTAGAG 59.625 60.000 7.83 9.63 35.76 2.43
2492 4176 4.202274 CCTCAGTCAAGCATCAGATCATCT 60.202 45.833 0.00 0.00 0.00 2.90
2586 4278 1.394712 CGATGACGATTCAATCACGCG 60.395 52.381 3.53 3.53 42.66 6.01
2592 4284 2.322999 GATTCAATCACGCGCCCACC 62.323 60.000 5.73 0.00 0.00 4.61
2593 4285 2.819984 ATTCAATCACGCGCCCACCT 62.820 55.000 5.73 0.00 0.00 4.00
2611 4303 1.762522 CTGACCAGGCACAGTGGACT 61.763 60.000 1.84 0.00 38.57 3.85
2616 4308 2.359230 GGCACAGTGGACTCAGGC 60.359 66.667 1.84 0.00 0.00 4.85
2639 4331 1.802337 CTCCAACACACGACCCGAGA 61.802 60.000 0.00 0.00 0.00 4.04
2666 4358 7.273381 GGACGTCAATTTTATCTGGATTTTGTG 59.727 37.037 18.91 0.00 0.00 3.33
2668 4360 7.594758 ACGTCAATTTTATCTGGATTTTGTGTG 59.405 33.333 0.00 0.00 0.00 3.82
2677 4369 4.825085 TCTGGATTTTGTGTGTTTAGGTCC 59.175 41.667 0.00 0.00 0.00 4.46
2681 4373 3.834489 TTTGTGTGTTTAGGTCCGGTA 57.166 42.857 0.00 0.00 0.00 4.02
2720 4412 3.773860 TTTGTATATTTGCGCTGGGTG 57.226 42.857 9.73 0.00 0.00 4.61
2816 4520 3.284617 AGAATCGGAAATTTAACCCCCG 58.715 45.455 8.55 8.55 41.36 5.73
2828 4532 1.205460 AACCCCCGTAGTTCATGCCT 61.205 55.000 0.00 0.00 0.00 4.75
2877 4581 7.801716 TGTATCAGCCTACAAAATAATCACC 57.198 36.000 0.00 0.00 0.00 4.02
2878 4582 7.342581 TGTATCAGCCTACAAAATAATCACCA 58.657 34.615 0.00 0.00 0.00 4.17
2879 4583 6.699575 ATCAGCCTACAAAATAATCACCAC 57.300 37.500 0.00 0.00 0.00 4.16
2880 4584 4.947388 TCAGCCTACAAAATAATCACCACC 59.053 41.667 0.00 0.00 0.00 4.61
2881 4585 4.097892 CAGCCTACAAAATAATCACCACCC 59.902 45.833 0.00 0.00 0.00 4.61
2882 4586 4.020543 GCCTACAAAATAATCACCACCCA 58.979 43.478 0.00 0.00 0.00 4.51
2883 4587 4.649218 GCCTACAAAATAATCACCACCCAT 59.351 41.667 0.00 0.00 0.00 4.00
2884 4588 5.830991 GCCTACAAAATAATCACCACCCATA 59.169 40.000 0.00 0.00 0.00 2.74
2885 4589 6.016276 GCCTACAAAATAATCACCACCCATAG 60.016 42.308 0.00 0.00 0.00 2.23
2886 4590 7.060421 CCTACAAAATAATCACCACCCATAGT 58.940 38.462 0.00 0.00 0.00 2.12
2887 4591 7.559897 CCTACAAAATAATCACCACCCATAGTT 59.440 37.037 0.00 0.00 0.00 2.24
2888 4592 7.790782 ACAAAATAATCACCACCCATAGTTT 57.209 32.000 0.00 0.00 0.00 2.66
2889 4593 7.836842 ACAAAATAATCACCACCCATAGTTTC 58.163 34.615 0.00 0.00 0.00 2.78
2890 4594 7.453126 ACAAAATAATCACCACCCATAGTTTCA 59.547 33.333 0.00 0.00 0.00 2.69
2891 4595 8.477256 CAAAATAATCACCACCCATAGTTTCAT 58.523 33.333 0.00 0.00 0.00 2.57
2892 4596 7.587037 AATAATCACCACCCATAGTTTCATG 57.413 36.000 0.00 0.00 0.00 3.07
2893 4597 4.860802 ATCACCACCCATAGTTTCATGA 57.139 40.909 0.00 0.00 0.00 3.07
2894 4598 3.950397 TCACCACCCATAGTTTCATGAC 58.050 45.455 0.00 0.00 0.00 3.06
2895 4599 2.677836 CACCACCCATAGTTTCATGACG 59.322 50.000 0.00 0.00 0.00 4.35
2896 4600 2.288666 CCACCCATAGTTTCATGACGG 58.711 52.381 0.00 0.00 0.00 4.79
2897 4601 1.670811 CACCCATAGTTTCATGACGGC 59.329 52.381 0.00 0.00 0.00 5.68
2898 4602 1.280710 ACCCATAGTTTCATGACGGCA 59.719 47.619 0.00 0.00 0.00 5.69
2899 4603 2.290641 ACCCATAGTTTCATGACGGCAA 60.291 45.455 0.00 0.00 0.00 4.52
2900 4604 2.752354 CCCATAGTTTCATGACGGCAAA 59.248 45.455 0.00 0.00 0.00 3.68
2901 4605 3.192422 CCCATAGTTTCATGACGGCAAAA 59.808 43.478 0.00 0.00 0.00 2.44
2902 4606 4.165779 CCATAGTTTCATGACGGCAAAAC 58.834 43.478 10.05 10.05 32.97 2.43
2903 4607 4.320861 CCATAGTTTCATGACGGCAAAACA 60.321 41.667 18.33 7.10 34.76 2.83
2904 4608 3.791973 AGTTTCATGACGGCAAAACAA 57.208 38.095 18.33 0.00 34.76 2.83
2905 4609 4.116747 AGTTTCATGACGGCAAAACAAA 57.883 36.364 18.33 2.80 34.76 2.83
2906 4610 4.111916 AGTTTCATGACGGCAAAACAAAG 58.888 39.130 18.33 0.00 34.76 2.77
2907 4611 3.791973 TTCATGACGGCAAAACAAAGT 57.208 38.095 0.00 0.00 0.00 2.66
2908 4612 3.347958 TCATGACGGCAAAACAAAGTC 57.652 42.857 0.00 0.00 0.00 3.01
2909 4613 2.685388 TCATGACGGCAAAACAAAGTCA 59.315 40.909 0.00 0.00 44.46 3.41
2910 4614 3.129462 TCATGACGGCAAAACAAAGTCAA 59.871 39.130 0.00 0.00 43.72 3.18
2911 4615 2.869897 TGACGGCAAAACAAAGTCAAC 58.130 42.857 0.00 0.00 38.66 3.18
2912 4616 1.843753 GACGGCAAAACAAAGTCAACG 59.156 47.619 0.00 0.00 32.57 4.10
2913 4617 1.196200 CGGCAAAACAAAGTCAACGG 58.804 50.000 0.00 0.00 0.00 4.44
2914 4618 1.468395 CGGCAAAACAAAGTCAACGGT 60.468 47.619 0.00 0.00 0.00 4.83
2915 4619 2.190161 GGCAAAACAAAGTCAACGGTC 58.810 47.619 0.00 0.00 0.00 4.79
2942 4646 2.999356 TGCTAGCGCACAAAGAACA 58.001 47.368 11.47 0.00 42.25 3.18
2943 4647 1.304254 TGCTAGCGCACAAAGAACAA 58.696 45.000 11.47 0.00 42.25 2.83
2948 4652 2.226330 AGCGCACAAAGAACAACCATA 58.774 42.857 11.47 0.00 0.00 2.74
2959 4663 8.299570 ACAAAGAACAACCATATTTCATGTCTC 58.700 33.333 0.00 0.00 0.00 3.36
2960 4664 8.298854 CAAAGAACAACCATATTTCATGTCTCA 58.701 33.333 0.00 0.00 0.00 3.27
2968 4672 5.704515 CCATATTTCATGTCTCATGGGTCTC 59.295 44.000 9.39 0.00 31.28 3.36
2970 4674 1.114627 TCATGTCTCATGGGTCTCCG 58.885 55.000 9.39 0.00 35.24 4.63
2982 4686 1.153628 GTCTCCGTGGTTCATCCCG 60.154 63.158 0.00 0.00 34.77 5.14
2993 4697 0.605319 TTCATCCCGGCACACAAGAC 60.605 55.000 0.00 0.00 0.00 3.01
2995 4699 3.605749 ATCCCGGCACACAAGACGG 62.606 63.158 0.29 0.29 45.57 4.79
3011 4715 5.525378 ACAAGACGGCTCAATTATCTTGATC 59.475 40.000 16.82 0.00 45.96 2.92
3015 4719 4.038042 ACGGCTCAATTATCTTGATCGAGA 59.962 41.667 15.18 15.18 32.97 4.04
3021 4725 9.585099 GCTCAATTATCTTGATCGAGAATCTAT 57.415 33.333 16.73 2.66 35.24 1.98
3059 4763 4.108501 ACCAACTTCTTATTTTCGGGGT 57.891 40.909 0.00 0.00 0.00 4.95
3061 4765 4.076394 CCAACTTCTTATTTTCGGGGTCA 58.924 43.478 0.00 0.00 0.00 4.02
3062 4766 4.705023 CCAACTTCTTATTTTCGGGGTCAT 59.295 41.667 0.00 0.00 0.00 3.06
3096 4800 0.105593 CGGTCATGAGCTAGTGCCAT 59.894 55.000 21.73 0.00 40.80 4.40
3107 4811 5.046304 TGAGCTAGTGCCATCTCTTTTACTT 60.046 40.000 0.00 0.00 40.80 2.24
3131 4835 3.817210 TTTGCATTGGTGGCCCCGA 62.817 57.895 0.00 0.60 35.15 5.14
3139 4843 4.593864 GTGGCCCCGATCTCGAGC 62.594 72.222 7.81 3.79 43.02 5.03
3156 4860 0.606673 AGCTTCTTCCTTTGGACGGC 60.607 55.000 0.00 0.00 0.00 5.68
3160 4864 1.741770 CTTCCTTTGGACGGCCTCG 60.742 63.158 9.82 0.00 43.02 4.63
3161 4865 3.248446 TTCCTTTGGACGGCCTCGG 62.248 63.158 9.82 6.27 41.39 4.63
3162 4866 4.016706 CCTTTGGACGGCCTCGGT 62.017 66.667 9.82 0.00 41.39 4.69
3163 4867 2.652095 CCTTTGGACGGCCTCGGTA 61.652 63.158 9.82 0.00 41.39 4.02
3164 4868 1.520666 CTTTGGACGGCCTCGGTAT 59.479 57.895 9.82 0.00 41.39 2.73
3165 4869 0.529992 CTTTGGACGGCCTCGGTATC 60.530 60.000 9.82 0.00 41.39 2.24
3166 4870 2.287457 TTTGGACGGCCTCGGTATCG 62.287 60.000 9.82 0.00 41.39 2.92
3167 4871 3.974757 GGACGGCCTCGGTATCGG 61.975 72.222 0.00 0.00 41.39 4.18
3168 4872 4.642542 GACGGCCTCGGTATCGGC 62.643 72.222 0.00 0.00 45.55 5.54
3170 4874 3.912907 CGGCCTCGGTATCGGCTT 61.913 66.667 0.00 0.00 45.57 4.35
3171 4875 2.504519 GGCCTCGGTATCGGCTTT 59.495 61.111 0.00 0.00 45.57 3.51
3172 4876 1.153229 GGCCTCGGTATCGGCTTTT 60.153 57.895 0.00 0.00 45.57 2.27
3173 4877 1.158484 GGCCTCGGTATCGGCTTTTC 61.158 60.000 0.00 0.00 45.57 2.29
3174 4878 1.158484 GCCTCGGTATCGGCTTTTCC 61.158 60.000 0.00 0.00 42.98 3.13
3185 4889 1.230324 GGCTTTTCCGCTATAGCTGG 58.770 55.000 21.98 22.06 39.32 4.85
3186 4890 1.230324 GCTTTTCCGCTATAGCTGGG 58.770 55.000 25.35 19.26 39.32 4.45
3187 4891 1.475213 GCTTTTCCGCTATAGCTGGGT 60.475 52.381 25.35 0.00 39.32 4.51
3188 4892 2.224209 GCTTTTCCGCTATAGCTGGGTA 60.224 50.000 25.35 12.71 39.32 3.69
3189 4893 3.557264 GCTTTTCCGCTATAGCTGGGTAT 60.557 47.826 25.35 0.00 39.32 2.73
3190 4894 3.955650 TTTCCGCTATAGCTGGGTATC 57.044 47.619 25.35 0.00 39.32 2.24
3191 4895 1.848652 TCCGCTATAGCTGGGTATCC 58.151 55.000 25.35 0.00 39.32 2.59
3192 4896 1.076513 TCCGCTATAGCTGGGTATCCA 59.923 52.381 25.35 0.00 41.69 3.41
3200 4904 3.950232 TGGGTATCCAGAGCGACC 58.050 61.111 0.00 0.00 38.32 4.79
3201 4905 2.125326 TGGGTATCCAGAGCGACCG 61.125 63.158 0.00 0.00 38.32 4.79
3202 4906 2.125961 GGGTATCCAGAGCGACCGT 61.126 63.158 0.00 0.00 32.38 4.83
3203 4907 1.065928 GGTATCCAGAGCGACCGTG 59.934 63.158 0.00 0.00 0.00 4.94
3204 4908 1.664321 GGTATCCAGAGCGACCGTGT 61.664 60.000 0.00 0.00 0.00 4.49
3205 4909 0.525668 GTATCCAGAGCGACCGTGTG 60.526 60.000 0.00 0.00 0.00 3.82
3206 4910 2.279502 TATCCAGAGCGACCGTGTGC 62.280 60.000 0.00 0.00 0.00 4.57
3207 4911 4.662961 CCAGAGCGACCGTGTGCA 62.663 66.667 0.00 0.00 0.00 4.57
3208 4912 2.433145 CAGAGCGACCGTGTGCAT 60.433 61.111 0.00 0.00 0.00 3.96
3209 4913 2.029288 CAGAGCGACCGTGTGCATT 61.029 57.895 0.00 0.00 0.00 3.56
3210 4914 2.029288 AGAGCGACCGTGTGCATTG 61.029 57.895 0.00 0.00 0.00 2.82
3211 4915 3.027170 GAGCGACCGTGTGCATTGG 62.027 63.158 0.00 0.00 0.00 3.16
3212 4916 4.759096 GCGACCGTGTGCATTGGC 62.759 66.667 0.00 0.00 41.68 4.52
3213 4917 4.444024 CGACCGTGTGCATTGGCG 62.444 66.667 0.00 0.00 45.35 5.69
3220 4924 2.644418 GTGCATTGGCGCTGTTGA 59.356 55.556 7.64 0.00 46.90 3.18
3221 4925 1.730547 GTGCATTGGCGCTGTTGAC 60.731 57.895 7.64 0.00 46.90 3.18
3222 4926 2.126346 GCATTGGCGCTGTTGACC 60.126 61.111 7.64 0.00 0.00 4.02
3223 4927 2.629656 GCATTGGCGCTGTTGACCT 61.630 57.895 7.64 0.00 0.00 3.85
3224 4928 1.503542 CATTGGCGCTGTTGACCTC 59.496 57.895 7.64 0.00 0.00 3.85
3225 4929 2.034879 ATTGGCGCTGTTGACCTCG 61.035 57.895 7.64 0.00 0.00 4.63
3226 4930 4.680237 TGGCGCTGTTGACCTCGG 62.680 66.667 7.64 0.00 0.00 4.63
3227 4931 4.373116 GGCGCTGTTGACCTCGGA 62.373 66.667 7.64 0.00 0.00 4.55
3228 4932 2.125512 GCGCTGTTGACCTCGGAT 60.126 61.111 0.00 0.00 0.00 4.18
3229 4933 1.741770 GCGCTGTTGACCTCGGATT 60.742 57.895 0.00 0.00 0.00 3.01
3230 4934 1.298859 GCGCTGTTGACCTCGGATTT 61.299 55.000 0.00 0.00 0.00 2.17
3231 4935 1.156736 CGCTGTTGACCTCGGATTTT 58.843 50.000 0.00 0.00 0.00 1.82
3232 4936 1.135972 CGCTGTTGACCTCGGATTTTG 60.136 52.381 0.00 0.00 0.00 2.44
3233 4937 1.401539 GCTGTTGACCTCGGATTTTGC 60.402 52.381 0.00 0.00 0.00 3.68
3234 4938 1.200020 CTGTTGACCTCGGATTTTGCC 59.800 52.381 0.00 0.00 0.00 4.52
3241 4945 4.514569 CGGATTTTGCCGTCGCCG 62.515 66.667 0.00 0.00 46.07 6.46
3242 4946 3.122323 GGATTTTGCCGTCGCCGA 61.122 61.111 0.00 0.00 35.63 5.54
3243 4947 2.399611 GATTTTGCCGTCGCCGAG 59.600 61.111 0.00 0.00 35.63 4.63
3244 4948 2.047655 ATTTTGCCGTCGCCGAGA 60.048 55.556 0.00 0.00 35.63 4.04
3245 4949 2.292802 GATTTTGCCGTCGCCGAGAC 62.293 60.000 0.00 1.60 46.16 3.36
3253 4957 3.379445 TCGCCGAGACAAGGACCC 61.379 66.667 0.00 0.00 0.00 4.46
3254 4958 3.691342 CGCCGAGACAAGGACCCA 61.691 66.667 0.00 0.00 0.00 4.51
3255 4959 2.747686 GCCGAGACAAGGACCCAA 59.252 61.111 0.00 0.00 0.00 4.12
3256 4960 1.299976 GCCGAGACAAGGACCCAAT 59.700 57.895 0.00 0.00 0.00 3.16
3257 4961 1.026718 GCCGAGACAAGGACCCAATG 61.027 60.000 0.00 0.00 0.00 2.82
3258 4962 0.324943 CCGAGACAAGGACCCAATGT 59.675 55.000 0.00 0.00 0.00 2.71
3259 4963 1.676014 CCGAGACAAGGACCCAATGTC 60.676 57.143 12.52 12.52 42.91 3.06
3260 4964 1.726853 GAGACAAGGACCCAATGTCG 58.273 55.000 13.87 0.00 46.19 4.35
3261 4965 0.324943 AGACAAGGACCCAATGTCGG 59.675 55.000 13.87 0.00 46.19 4.79
3270 4974 0.887933 CCCAATGTCGGGTTTCTTGG 59.112 55.000 0.00 0.00 41.83 3.61
3271 4975 1.546773 CCCAATGTCGGGTTTCTTGGA 60.547 52.381 1.31 0.00 41.83 3.53
3272 4976 2.446435 CCAATGTCGGGTTTCTTGGAT 58.554 47.619 0.00 0.00 38.92 3.41
3273 4977 2.164219 CCAATGTCGGGTTTCTTGGATG 59.836 50.000 0.00 0.00 38.92 3.51
3274 4978 3.081061 CAATGTCGGGTTTCTTGGATGA 58.919 45.455 0.00 0.00 0.00 2.92
3275 4979 2.178912 TGTCGGGTTTCTTGGATGAC 57.821 50.000 0.00 0.00 0.00 3.06
3276 4980 1.271163 TGTCGGGTTTCTTGGATGACC 60.271 52.381 0.00 0.00 0.00 4.02
3277 4981 0.326927 TCGGGTTTCTTGGATGACCC 59.673 55.000 0.27 0.27 46.65 4.46
3278 4982 2.868253 GGGTTTCTTGGATGACCCG 58.132 57.895 0.00 0.00 42.07 5.28
3279 4983 0.326927 GGGTTTCTTGGATGACCCGA 59.673 55.000 0.00 0.00 42.07 5.14
3280 4984 1.450025 GGTTTCTTGGATGACCCGAC 58.550 55.000 0.00 0.00 37.93 4.79
3281 4985 1.076332 GTTTCTTGGATGACCCGACG 58.924 55.000 0.00 0.00 37.93 5.12
3282 4986 0.672401 TTTCTTGGATGACCCGACGC 60.672 55.000 0.00 0.00 37.93 5.19
3283 4987 2.511600 CTTGGATGACCCGACGCC 60.512 66.667 0.00 0.00 37.93 5.68
3284 4988 3.309436 CTTGGATGACCCGACGCCA 62.309 63.158 0.00 0.00 37.93 5.69
3285 4989 2.593468 CTTGGATGACCCGACGCCAT 62.593 60.000 0.00 0.00 37.93 4.40
3286 4990 2.280186 GGATGACCCGACGCCATC 60.280 66.667 11.95 11.95 36.78 3.51
3287 4991 2.499205 GATGACCCGACGCCATCA 59.501 61.111 14.18 7.13 37.30 3.07
3288 4992 1.069765 GATGACCCGACGCCATCAT 59.930 57.895 14.18 10.69 37.30 2.45
3289 4993 0.946221 GATGACCCGACGCCATCATC 60.946 60.000 14.47 14.47 40.37 2.92
3290 4994 1.685355 ATGACCCGACGCCATCATCA 61.685 55.000 0.00 0.00 0.00 3.07
3291 4995 1.592669 GACCCGACGCCATCATCAG 60.593 63.158 0.00 0.00 0.00 2.90
3292 4996 2.969238 CCCGACGCCATCATCAGC 60.969 66.667 0.00 0.00 0.00 4.26
3298 5002 3.945434 GCCATCATCAGCGGCGTG 61.945 66.667 9.37 5.92 35.79 5.34
3299 5003 3.945434 CCATCATCAGCGGCGTGC 61.945 66.667 9.37 0.00 46.98 5.34
3308 5012 2.355956 GCGGCGTGCCTATACCTC 60.356 66.667 9.37 0.00 37.76 3.85
3309 5013 2.338984 CGGCGTGCCTATACCTCC 59.661 66.667 9.55 0.00 0.00 4.30
3310 5014 2.495409 CGGCGTGCCTATACCTCCA 61.495 63.158 9.55 0.00 0.00 3.86
3311 5015 1.367840 GGCGTGCCTATACCTCCAG 59.632 63.158 2.98 0.00 0.00 3.86
3312 5016 1.301009 GCGTGCCTATACCTCCAGC 60.301 63.158 0.00 0.00 0.00 4.85
3313 5017 1.367840 CGTGCCTATACCTCCAGCC 59.632 63.158 0.00 0.00 0.00 4.85
3314 5018 1.399744 CGTGCCTATACCTCCAGCCA 61.400 60.000 0.00 0.00 0.00 4.75
3315 5019 1.059913 GTGCCTATACCTCCAGCCAT 58.940 55.000 0.00 0.00 0.00 4.40
3316 5020 1.002544 GTGCCTATACCTCCAGCCATC 59.997 57.143 0.00 0.00 0.00 3.51
3317 5021 0.247736 GCCTATACCTCCAGCCATCG 59.752 60.000 0.00 0.00 0.00 3.84
3318 5022 0.247736 CCTATACCTCCAGCCATCGC 59.752 60.000 0.00 0.00 0.00 4.58
3320 5024 1.203523 CTATACCTCCAGCCATCGCTC 59.796 57.143 0.00 0.00 43.95 5.03
3321 5025 0.470833 ATACCTCCAGCCATCGCTCT 60.471 55.000 0.00 0.00 43.95 4.09
3322 5026 1.109920 TACCTCCAGCCATCGCTCTC 61.110 60.000 0.00 0.00 43.95 3.20
3323 5027 2.132996 CCTCCAGCCATCGCTCTCT 61.133 63.158 0.00 0.00 43.95 3.10
3324 5028 1.067749 CTCCAGCCATCGCTCTCTG 59.932 63.158 0.00 0.00 43.95 3.35
3325 5029 2.108566 CCAGCCATCGCTCTCTGG 59.891 66.667 0.00 0.00 43.95 3.86
3329 5033 4.950479 CCATCGCTCTCTGGCTTT 57.050 55.556 0.00 0.00 0.00 3.51
3330 5034 2.391469 CCATCGCTCTCTGGCTTTG 58.609 57.895 0.00 0.00 0.00 2.77
3331 5035 1.094073 CCATCGCTCTCTGGCTTTGG 61.094 60.000 0.00 0.00 0.00 3.28
3332 5036 0.107993 CATCGCTCTCTGGCTTTGGA 60.108 55.000 0.00 0.00 0.00 3.53
3333 5037 0.835941 ATCGCTCTCTGGCTTTGGAT 59.164 50.000 0.00 0.00 0.00 3.41
3334 5038 0.176680 TCGCTCTCTGGCTTTGGATC 59.823 55.000 0.00 0.00 0.00 3.36
3335 5039 0.813210 CGCTCTCTGGCTTTGGATCC 60.813 60.000 4.20 4.20 0.00 3.36
3336 5040 0.254178 GCTCTCTGGCTTTGGATCCA 59.746 55.000 11.44 11.44 0.00 3.41
3343 5047 2.832838 TGGCTTTGGATCCAGAGTAGA 58.167 47.619 27.98 13.17 31.67 2.59
3344 5048 2.501723 TGGCTTTGGATCCAGAGTAGAC 59.498 50.000 27.98 19.62 31.67 2.59
3345 5049 2.501723 GGCTTTGGATCCAGAGTAGACA 59.498 50.000 27.98 4.34 31.67 3.41
3346 5050 3.526534 GCTTTGGATCCAGAGTAGACAC 58.473 50.000 27.98 10.90 31.67 3.67
3347 5051 3.775202 CTTTGGATCCAGAGTAGACACG 58.225 50.000 21.58 0.00 0.00 4.49
3348 5052 1.103803 TGGATCCAGAGTAGACACGC 58.896 55.000 11.44 0.00 0.00 5.34
3349 5053 1.103803 GGATCCAGAGTAGACACGCA 58.896 55.000 6.95 0.00 0.00 5.24
3350 5054 1.683917 GGATCCAGAGTAGACACGCAT 59.316 52.381 6.95 0.00 0.00 4.73
3351 5055 2.287909 GGATCCAGAGTAGACACGCATC 60.288 54.545 6.95 0.00 0.00 3.91
3352 5056 2.130272 TCCAGAGTAGACACGCATCT 57.870 50.000 0.00 0.00 0.00 2.90
3353 5057 1.745653 TCCAGAGTAGACACGCATCTG 59.254 52.381 0.00 0.00 37.68 2.90
3354 5058 2.200792 CAGAGTAGACACGCATCTGG 57.799 55.000 0.00 0.00 34.97 3.86
3355 5059 1.745653 CAGAGTAGACACGCATCTGGA 59.254 52.381 0.00 0.00 34.97 3.86
3356 5060 2.020720 AGAGTAGACACGCATCTGGAG 58.979 52.381 0.00 0.00 0.00 3.86
3357 5061 0.457851 AGTAGACACGCATCTGGAGC 59.542 55.000 0.00 0.00 0.00 4.70
3358 5062 0.528684 GTAGACACGCATCTGGAGCC 60.529 60.000 0.00 0.00 0.00 4.70
3359 5063 2.004808 TAGACACGCATCTGGAGCCG 62.005 60.000 0.00 0.00 0.00 5.52
3392 5096 3.508840 CCGCCGCTGGATCCAAAC 61.509 66.667 17.00 10.09 0.00 2.93
3393 5097 3.864686 CGCCGCTGGATCCAAACG 61.865 66.667 23.57 23.57 0.00 3.60
3394 5098 4.179579 GCCGCTGGATCCAAACGC 62.180 66.667 24.62 19.35 0.00 4.84
3395 5099 2.745884 CCGCTGGATCCAAACGCA 60.746 61.111 24.62 0.00 0.00 5.24
3396 5100 2.331893 CCGCTGGATCCAAACGCAA 61.332 57.895 24.62 0.00 0.00 4.85
3397 5101 1.154225 CGCTGGATCCAAACGCAAC 60.154 57.895 20.28 3.12 0.00 4.17
3398 5102 1.577328 CGCTGGATCCAAACGCAACT 61.577 55.000 20.28 0.00 0.00 3.16
3399 5103 0.109597 GCTGGATCCAAACGCAACTG 60.110 55.000 17.00 1.44 0.00 3.16
3400 5104 0.523072 CTGGATCCAAACGCAACTGG 59.477 55.000 17.00 0.00 0.00 4.00
3401 5105 1.212751 GGATCCAAACGCAACTGGC 59.787 57.895 6.95 0.00 39.90 4.85
3402 5106 1.244019 GGATCCAAACGCAACTGGCT 61.244 55.000 6.95 0.00 41.67 4.75
3403 5107 0.169009 GATCCAAACGCAACTGGCTC 59.831 55.000 0.00 0.00 41.67 4.70
3404 5108 0.537143 ATCCAAACGCAACTGGCTCA 60.537 50.000 0.00 0.00 41.67 4.26
3405 5109 0.537143 TCCAAACGCAACTGGCTCAT 60.537 50.000 0.00 0.00 41.67 2.90
3406 5110 1.164411 CCAAACGCAACTGGCTCATA 58.836 50.000 0.00 0.00 41.67 2.15
3407 5111 1.135689 CCAAACGCAACTGGCTCATAC 60.136 52.381 0.00 0.00 41.67 2.39
3408 5112 0.796312 AAACGCAACTGGCTCATACG 59.204 50.000 0.00 0.00 41.67 3.06
3409 5113 0.320421 AACGCAACTGGCTCATACGT 60.320 50.000 0.00 0.00 41.67 3.57
3410 5114 0.736325 ACGCAACTGGCTCATACGTC 60.736 55.000 0.00 0.00 41.67 4.34
3411 5115 1.742900 CGCAACTGGCTCATACGTCG 61.743 60.000 0.00 0.00 41.67 5.12
3412 5116 0.736325 GCAACTGGCTCATACGTCGT 60.736 55.000 2.21 2.21 40.25 4.34
3413 5117 0.992072 CAACTGGCTCATACGTCGTG 59.008 55.000 8.47 0.00 0.00 4.35
3414 5118 0.885879 AACTGGCTCATACGTCGTGA 59.114 50.000 8.47 0.00 0.00 4.35
3415 5119 0.885879 ACTGGCTCATACGTCGTGAA 59.114 50.000 8.47 0.00 0.00 3.18
3416 5120 1.476891 ACTGGCTCATACGTCGTGAAT 59.523 47.619 8.47 0.00 0.00 2.57
3417 5121 1.854743 CTGGCTCATACGTCGTGAATG 59.145 52.381 8.47 4.92 0.00 2.67
3418 5122 0.577269 GGCTCATACGTCGTGAATGC 59.423 55.000 8.47 7.36 0.00 3.56
3419 5123 0.227234 GCTCATACGTCGTGAATGCG 59.773 55.000 8.47 0.90 0.00 4.73
3420 5124 1.545759 CTCATACGTCGTGAATGCGT 58.454 50.000 8.47 0.00 41.86 5.24
3421 5125 1.252779 CTCATACGTCGTGAATGCGTG 59.747 52.381 8.47 0.00 39.31 5.34
3422 5126 0.297525 CATACGTCGTGAATGCGTGG 59.702 55.000 8.47 0.00 39.31 4.94
3423 5127 0.804544 ATACGTCGTGAATGCGTGGG 60.805 55.000 8.47 0.00 39.31 4.61
3424 5128 2.144833 TACGTCGTGAATGCGTGGGT 62.145 55.000 8.47 0.00 39.31 4.51
3425 5129 1.444724 CGTCGTGAATGCGTGGGTA 60.445 57.895 0.00 0.00 0.00 3.69
3426 5130 1.009903 CGTCGTGAATGCGTGGGTAA 61.010 55.000 0.00 0.00 0.00 2.85
3427 5131 1.149987 GTCGTGAATGCGTGGGTAAA 58.850 50.000 0.00 0.00 0.00 2.01
3428 5132 1.127951 GTCGTGAATGCGTGGGTAAAG 59.872 52.381 0.00 0.00 0.00 1.85
3429 5133 0.446222 CGTGAATGCGTGGGTAAAGG 59.554 55.000 0.00 0.00 0.00 3.11
3430 5134 0.170339 GTGAATGCGTGGGTAAAGGC 59.830 55.000 0.00 0.00 0.00 4.35
3431 5135 1.302383 TGAATGCGTGGGTAAAGGCG 61.302 55.000 0.00 0.00 33.67 5.52
3435 5139 3.428282 CGTGGGTAAAGGCGCACC 61.428 66.667 10.83 8.10 45.68 5.01
3445 5149 3.695606 GGCGCACCTGACTCTCCA 61.696 66.667 10.83 0.00 0.00 3.86
3446 5150 2.343758 GCGCACCTGACTCTCCAA 59.656 61.111 0.30 0.00 0.00 3.53
3447 5151 1.078848 GCGCACCTGACTCTCCAAT 60.079 57.895 0.30 0.00 0.00 3.16
3448 5152 1.086634 GCGCACCTGACTCTCCAATC 61.087 60.000 0.30 0.00 0.00 2.67
3449 5153 0.803768 CGCACCTGACTCTCCAATCG 60.804 60.000 0.00 0.00 0.00 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.028748 ACGTCTTCTAGCGCCCTAAAAA 60.029 45.455 2.29 0.00 0.00 1.94
15 16 1.547372 ACGTCTTCTAGCGCCCTAAAA 59.453 47.619 2.29 0.00 0.00 1.52
16 17 1.180029 ACGTCTTCTAGCGCCCTAAA 58.820 50.000 2.29 0.00 0.00 1.85
17 18 1.180029 AACGTCTTCTAGCGCCCTAA 58.820 50.000 2.29 0.00 0.00 2.69
18 19 1.135199 CAAACGTCTTCTAGCGCCCTA 60.135 52.381 2.29 0.00 0.00 3.53
19 20 0.389948 CAAACGTCTTCTAGCGCCCT 60.390 55.000 2.29 0.00 0.00 5.19
20 21 1.967597 GCAAACGTCTTCTAGCGCCC 61.968 60.000 2.29 0.00 0.00 6.13
21 22 1.014564 AGCAAACGTCTTCTAGCGCC 61.015 55.000 2.29 0.00 0.00 6.53
22 23 0.367210 GAGCAAACGTCTTCTAGCGC 59.633 55.000 0.00 0.00 0.00 5.92
23 24 0.992802 GGAGCAAACGTCTTCTAGCG 59.007 55.000 0.00 0.00 0.00 4.26
24 25 2.080286 TGGAGCAAACGTCTTCTAGC 57.920 50.000 0.00 0.00 0.00 3.42
25 26 3.390135 TGTTGGAGCAAACGTCTTCTAG 58.610 45.455 0.00 0.00 32.47 2.43
26 27 3.462483 TGTTGGAGCAAACGTCTTCTA 57.538 42.857 0.00 0.00 32.47 2.10
27 28 2.325583 TGTTGGAGCAAACGTCTTCT 57.674 45.000 0.00 0.00 32.47 2.85
28 29 3.105937 GTTTGTTGGAGCAAACGTCTTC 58.894 45.455 3.73 0.00 45.46 2.87
29 30 3.145212 GTTTGTTGGAGCAAACGTCTT 57.855 42.857 3.73 0.00 45.46 3.01
30 31 2.844122 GTTTGTTGGAGCAAACGTCT 57.156 45.000 3.73 0.00 45.46 4.18
35 36 0.814457 ACAGCGTTTGTTGGAGCAAA 59.186 45.000 0.00 0.00 36.31 3.68
36 37 1.669604 TACAGCGTTTGTTGGAGCAA 58.330 45.000 0.17 0.00 41.29 3.91
37 38 1.669604 TTACAGCGTTTGTTGGAGCA 58.330 45.000 0.17 0.00 41.29 4.26
38 39 2.766970 TTTACAGCGTTTGTTGGAGC 57.233 45.000 0.17 0.00 41.29 4.70
39 40 6.378582 ACATATTTTACAGCGTTTGTTGGAG 58.621 36.000 0.17 0.00 41.29 3.86
40 41 6.320494 ACATATTTTACAGCGTTTGTTGGA 57.680 33.333 0.17 0.00 41.29 3.53
41 42 6.615418 GCAACATATTTTACAGCGTTTGTTGG 60.615 38.462 12.64 0.00 41.66 3.77
42 43 6.288419 GCAACATATTTTACAGCGTTTGTTG 58.712 36.000 7.82 7.82 43.28 3.33
43 44 5.116377 CGCAACATATTTTACAGCGTTTGTT 59.884 36.000 0.00 0.00 41.29 2.83
44 45 4.615121 CGCAACATATTTTACAGCGTTTGT 59.385 37.500 0.00 0.61 43.96 2.83
45 46 4.488573 GCGCAACATATTTTACAGCGTTTG 60.489 41.667 0.30 0.00 44.83 2.93
46 47 3.606346 GCGCAACATATTTTACAGCGTTT 59.394 39.130 0.30 0.00 44.83 3.60
47 48 3.168193 GCGCAACATATTTTACAGCGTT 58.832 40.909 0.30 0.00 44.83 4.84
48 49 2.780993 GCGCAACATATTTTACAGCGT 58.219 42.857 0.30 0.00 44.83 5.07
49 50 1.767405 CGCGCAACATATTTTACAGCG 59.233 47.619 8.75 0.00 45.68 5.18
50 51 2.525891 CACGCGCAACATATTTTACAGC 59.474 45.455 5.73 0.00 0.00 4.40
51 52 3.997276 TCACGCGCAACATATTTTACAG 58.003 40.909 5.73 0.00 0.00 2.74
52 53 3.181515 CCTCACGCGCAACATATTTTACA 60.182 43.478 5.73 0.00 0.00 2.41
53 54 3.350912 CCTCACGCGCAACATATTTTAC 58.649 45.455 5.73 0.00 0.00 2.01
54 55 2.223157 GCCTCACGCGCAACATATTTTA 60.223 45.455 5.73 0.00 0.00 1.52
55 56 1.467374 GCCTCACGCGCAACATATTTT 60.467 47.619 5.73 0.00 0.00 1.82
56 57 0.098728 GCCTCACGCGCAACATATTT 59.901 50.000 5.73 0.00 0.00 1.40
57 58 1.024046 TGCCTCACGCGCAACATATT 61.024 50.000 5.73 0.00 42.08 1.28
58 59 1.449423 TGCCTCACGCGCAACATAT 60.449 52.632 5.73 0.00 42.08 1.78
59 60 2.047750 TGCCTCACGCGCAACATA 60.048 55.556 5.73 0.00 42.08 2.29
66 67 3.181530 GCATATATTTAGTGCCTCACGCG 60.182 47.826 3.53 3.53 42.08 6.01
67 68 3.997021 AGCATATATTTAGTGCCTCACGC 59.003 43.478 0.00 0.00 39.64 5.34
68 69 6.545504 AAAGCATATATTTAGTGCCTCACG 57.454 37.500 0.00 0.00 39.64 4.35
98 99 2.430080 ATAACTAATGCAGCGCGCGC 62.430 55.000 45.10 45.10 46.97 6.86
99 100 0.781787 TATAACTAATGCAGCGCGCG 59.218 50.000 28.44 28.44 46.97 6.86
100 101 1.462541 GCTATAACTAATGCAGCGCGC 60.463 52.381 26.66 26.66 42.89 6.86
101 102 2.493997 GCTATAACTAATGCAGCGCG 57.506 50.000 0.00 0.00 0.00 6.86
104 105 2.410262 CGCACGCTATAACTAATGCAGC 60.410 50.000 0.00 0.00 33.27 5.25
105 106 2.410262 GCGCACGCTATAACTAATGCAG 60.410 50.000 7.96 0.00 38.26 4.41
106 107 1.525197 GCGCACGCTATAACTAATGCA 59.475 47.619 7.96 0.00 38.26 3.96
107 108 2.212922 GCGCACGCTATAACTAATGC 57.787 50.000 7.96 0.00 38.26 3.56
119 120 1.983160 CTGCATAAAAAGCGCACGC 59.017 52.632 11.47 6.99 42.33 5.34
120 121 0.454957 AGCTGCATAAAAAGCGCACG 60.455 50.000 11.47 0.00 44.34 5.34
121 122 0.986992 CAGCTGCATAAAAAGCGCAC 59.013 50.000 11.47 0.00 44.34 5.34
122 123 0.733566 GCAGCTGCATAAAAAGCGCA 60.734 50.000 33.36 0.00 44.34 6.09
123 124 0.457337 AGCAGCTGCATAAAAAGCGC 60.457 50.000 38.24 8.88 44.34 5.92
124 125 1.265568 CAGCAGCTGCATAAAAAGCG 58.734 50.000 38.24 12.18 44.34 4.68
125 126 1.203052 TCCAGCAGCTGCATAAAAAGC 59.797 47.619 38.24 10.26 45.16 3.51
126 127 2.751259 TCTCCAGCAGCTGCATAAAAAG 59.249 45.455 38.24 24.30 45.16 2.27
127 128 2.489329 GTCTCCAGCAGCTGCATAAAAA 59.511 45.455 38.24 17.34 45.16 1.94
128 129 2.086869 GTCTCCAGCAGCTGCATAAAA 58.913 47.619 38.24 18.94 45.16 1.52
129 130 1.280133 AGTCTCCAGCAGCTGCATAAA 59.720 47.619 38.24 20.04 45.16 1.40
130 131 0.907486 AGTCTCCAGCAGCTGCATAA 59.093 50.000 38.24 21.78 45.16 1.90
131 132 0.463204 GAGTCTCCAGCAGCTGCATA 59.537 55.000 38.24 22.16 45.16 3.14
132 133 1.221293 GAGTCTCCAGCAGCTGCAT 59.779 57.895 38.24 21.56 45.16 3.96
133 134 2.661399 GAGTCTCCAGCAGCTGCA 59.339 61.111 38.24 18.87 45.16 4.41
134 135 2.125188 GGAGTCTCCAGCAGCTGC 60.125 66.667 31.53 31.53 36.28 5.25
135 136 3.385469 TGGAGTCTCCAGCAGCTG 58.615 61.111 18.15 16.23 42.67 4.24
142 143 0.902531 GACCCGATTTGGAGTCTCCA 59.097 55.000 18.15 18.15 46.61 3.86
143 144 0.178301 GGACCCGATTTGGAGTCTCC 59.822 60.000 12.40 12.40 42.00 3.71
144 145 0.179108 CGGACCCGATTTGGAGTCTC 60.179 60.000 1.54 0.00 42.00 3.36
145 146 1.898154 CGGACCCGATTTGGAGTCT 59.102 57.895 1.54 0.00 42.00 3.24
146 147 1.814169 GCGGACCCGATTTGGAGTC 60.814 63.158 13.24 0.00 42.00 3.36
147 148 2.267961 GCGGACCCGATTTGGAGT 59.732 61.111 13.24 0.00 42.00 3.85
148 149 2.106683 GTGCGGACCCGATTTGGAG 61.107 63.158 13.24 0.00 42.00 3.86
149 150 2.046700 GTGCGGACCCGATTTGGA 60.047 61.111 13.24 0.00 42.00 3.53
150 151 3.496131 CGTGCGGACCCGATTTGG 61.496 66.667 13.24 0.00 42.83 3.28
151 152 4.160635 GCGTGCGGACCCGATTTG 62.161 66.667 13.24 0.00 42.83 2.32
161 162 3.982424 CTGCTTTTAGCGCGTGCGG 62.982 63.158 16.39 4.67 46.26 5.69
162 163 2.571611 CTGCTTTTAGCGCGTGCG 60.572 61.111 16.39 10.36 46.26 5.34
163 164 0.660300 AAACTGCTTTTAGCGCGTGC 60.660 50.000 14.39 14.39 46.26 5.34
164 165 1.753956 AAAACTGCTTTTAGCGCGTG 58.246 45.000 8.43 0.00 46.26 5.34
165 166 2.485266 AAAAACTGCTTTTAGCGCGT 57.515 40.000 8.43 0.00 46.26 6.01
166 167 4.494410 GGTATAAAAACTGCTTTTAGCGCG 59.506 41.667 0.00 0.00 46.26 6.86
167 168 4.494410 CGGTATAAAAACTGCTTTTAGCGC 59.506 41.667 0.00 0.00 46.26 5.92
168 169 4.494410 GCGGTATAAAAACTGCTTTTAGCG 59.506 41.667 0.63 6.37 46.26 4.26
169 170 5.926894 GCGGTATAAAAACTGCTTTTAGC 57.073 39.130 0.63 0.00 46.27 3.09
176 177 0.095762 ACGCGCGGTATAAAAACTGC 59.904 50.000 35.22 0.00 46.30 4.40
177 178 1.588082 CGACGCGCGGTATAAAAACTG 60.588 52.381 35.22 0.99 36.03 3.16
178 179 0.641783 CGACGCGCGGTATAAAAACT 59.358 50.000 35.22 8.59 36.03 2.66
179 180 0.916320 GCGACGCGCGGTATAAAAAC 60.916 55.000 35.22 11.64 44.55 2.43
180 181 1.344498 GCGACGCGCGGTATAAAAA 59.656 52.632 35.22 0.00 44.55 1.94
181 182 2.997072 GCGACGCGCGGTATAAAA 59.003 55.556 35.22 0.00 44.55 1.52
198 199 3.521560 TCCAACAGAAGCGCTACATAAG 58.478 45.455 12.05 0.00 0.00 1.73
199 200 3.194755 TCTCCAACAGAAGCGCTACATAA 59.805 43.478 12.05 0.00 0.00 1.90
200 201 2.758423 TCTCCAACAGAAGCGCTACATA 59.242 45.455 12.05 0.00 0.00 2.29
201 202 1.550524 TCTCCAACAGAAGCGCTACAT 59.449 47.619 12.05 0.00 0.00 2.29
202 203 0.966179 TCTCCAACAGAAGCGCTACA 59.034 50.000 12.05 0.00 0.00 2.74
203 204 1.929836 CATCTCCAACAGAAGCGCTAC 59.070 52.381 12.05 0.00 33.62 3.58
204 205 1.740380 GCATCTCCAACAGAAGCGCTA 60.740 52.381 12.05 0.00 36.17 4.26
205 206 1.023513 GCATCTCCAACAGAAGCGCT 61.024 55.000 2.64 2.64 36.17 5.92
206 207 1.427020 GCATCTCCAACAGAAGCGC 59.573 57.895 0.00 0.00 36.17 5.92
220 221 5.004922 AGCTTAGTCACAGTTAGAGCATC 57.995 43.478 0.00 0.00 0.00 3.91
221 222 4.709397 AGAGCTTAGTCACAGTTAGAGCAT 59.291 41.667 0.00 0.00 0.00 3.79
222 223 4.082845 AGAGCTTAGTCACAGTTAGAGCA 58.917 43.478 0.00 0.00 0.00 4.26
223 224 4.712122 AGAGCTTAGTCACAGTTAGAGC 57.288 45.455 0.00 0.00 0.00 4.09
224 225 6.364706 CACAAAGAGCTTAGTCACAGTTAGAG 59.635 42.308 0.00 0.00 0.00 2.43
225 226 6.183360 ACACAAAGAGCTTAGTCACAGTTAGA 60.183 38.462 0.00 0.00 0.00 2.10
226 227 5.986135 ACACAAAGAGCTTAGTCACAGTTAG 59.014 40.000 0.00 0.00 0.00 2.34
227 228 5.914033 ACACAAAGAGCTTAGTCACAGTTA 58.086 37.500 0.00 0.00 0.00 2.24
228 229 4.770795 ACACAAAGAGCTTAGTCACAGTT 58.229 39.130 0.00 0.00 0.00 3.16
229 230 4.408182 ACACAAAGAGCTTAGTCACAGT 57.592 40.909 0.00 0.00 0.00 3.55
230 231 6.646653 TGATAACACAAAGAGCTTAGTCACAG 59.353 38.462 0.00 0.00 0.00 3.66
319 320 9.110502 GCCCAGTGTATAATATTAAATAGGAGC 57.889 37.037 0.00 1.26 0.00 4.70
413 769 6.627243 ACTGTACTGACTCGTTATTTGCATA 58.373 36.000 6.77 0.00 0.00 3.14
454 810 5.462398 GGAATCAACGGTCAGTATCATACAC 59.538 44.000 0.00 0.00 0.00 2.90
503 859 2.830923 AGAGAGGACACAAGAGGACATG 59.169 50.000 0.00 0.00 0.00 3.21
584 2056 7.068103 TCCCAAAATATATGACGCACTTTTGAT 59.932 33.333 7.03 0.00 36.28 2.57
585 2057 6.375736 TCCCAAAATATATGACGCACTTTTGA 59.624 34.615 7.03 0.00 36.28 2.69
586 2058 6.559810 TCCCAAAATATATGACGCACTTTTG 58.440 36.000 0.00 0.00 34.81 2.44
588 2060 6.183360 CCTTCCCAAAATATATGACGCACTTT 60.183 38.462 0.00 0.00 0.00 2.66
684 2157 2.152016 GCTTCACCCTCACCAAGTTAC 58.848 52.381 0.00 0.00 0.00 2.50
703 2367 1.158484 GGTCGCCGGGAAATTCTAGC 61.158 60.000 2.18 0.00 0.00 3.42
730 2394 3.284793 TTTCTCTCACGGGTTTTTCCA 57.715 42.857 0.00 0.00 38.11 3.53
806 2470 9.926751 CATTACATAGTCATGTCATCAAACTTC 57.073 33.333 0.00 0.00 44.42 3.01
844 2511 8.545420 CAATTTTACATTGCTGATGATAAAGCC 58.455 33.333 7.50 0.00 38.71 4.35
895 2566 4.805719 CGTACTGCAGCAGAGAATGAAATA 59.194 41.667 29.70 4.43 35.18 1.40
912 2583 4.973051 GTCAGAGTTGATATCAGCGTACTG 59.027 45.833 23.56 23.56 39.39 2.74
915 2586 4.498177 GCTGTCAGAGTTGATATCAGCGTA 60.498 45.833 13.16 0.00 39.56 4.42
919 2590 4.750598 CCATGCTGTCAGAGTTGATATCAG 59.249 45.833 3.32 0.00 35.39 2.90
955 2626 1.795170 GCTCCGCCTTGTGCTGAAAA 61.795 55.000 0.00 0.00 38.05 2.29
1117 2788 2.503061 CAGAGGCACCGCAGCTAT 59.497 61.111 0.00 0.00 34.17 2.97
1136 2807 9.125906 GATCAATGTTGAACTCTGAAGAATTTG 57.874 33.333 0.00 0.00 41.13 2.32
1153 2824 0.595588 TTTGCGTGCGGATCAATGTT 59.404 45.000 0.00 0.00 0.00 2.71
1156 2827 1.134487 CGTTTGCGTGCGGATCAAT 59.866 52.632 0.00 0.00 0.00 2.57
1170 2841 3.343421 GAGAACACGGCCGCGTTT 61.343 61.111 30.29 20.10 0.00 3.60
1179 2850 1.213013 CTCGTCCAGGGAGAACACG 59.787 63.158 0.00 0.00 33.27 4.49
1587 3259 5.762825 ATTTCATATCATGGCAGTGTCAC 57.237 39.130 0.00 0.00 0.00 3.67
1588 3260 6.038936 CAGAATTTCATATCATGGCAGTGTCA 59.961 38.462 0.00 0.00 0.00 3.58
1589 3261 6.436261 CAGAATTTCATATCATGGCAGTGTC 58.564 40.000 0.00 0.00 0.00 3.67
1590 3262 5.221185 GCAGAATTTCATATCATGGCAGTGT 60.221 40.000 0.00 0.00 0.00 3.55
1591 3263 5.220381 GCAGAATTTCATATCATGGCAGTG 58.780 41.667 0.00 0.00 0.00 3.66
1592 3264 4.891168 TGCAGAATTTCATATCATGGCAGT 59.109 37.500 0.00 0.00 0.00 4.40
1597 3269 9.914923 CATTTTTGTGCAGAATTTCATATCATG 57.085 29.630 0.00 0.00 0.00 3.07
1614 3287 4.753107 AGCTTCTGGCAATTCATTTTTGTG 59.247 37.500 0.00 0.00 44.79 3.33
1621 3294 5.068723 CCTCATAAAGCTTCTGGCAATTCAT 59.931 40.000 0.00 0.00 44.79 2.57
1639 3312 6.382282 AGAGATGAGACATCAACAACCTCATA 59.618 38.462 13.06 0.00 42.59 2.15
1658 3331 2.490509 TGCCAGCAACAAATCAGAGATG 59.509 45.455 0.00 0.00 0.00 2.90
1668 3341 4.892965 ACGCCCTGCCAGCAACAA 62.893 61.111 0.00 0.00 0.00 2.83
1753 3430 3.554342 CTCCTCCTCCCCGCCATG 61.554 72.222 0.00 0.00 0.00 3.66
2387 4064 1.741770 CCGTCTTCTTCTTGGCCGG 60.742 63.158 0.00 0.00 0.00 6.13
2492 4176 6.013725 ACAAGTGGATTTACAGAGTGACCATA 60.014 38.462 0.00 0.00 0.00 2.74
2592 4284 1.302033 GTCCACTGTGCCTGGTCAG 60.302 63.158 15.60 15.60 37.65 3.51
2593 4285 1.758440 GAGTCCACTGTGCCTGGTCA 61.758 60.000 1.29 0.00 0.00 4.02
2597 4289 1.004080 CCTGAGTCCACTGTGCCTG 60.004 63.158 1.29 0.00 0.00 4.85
2606 4298 1.059584 TTGGAGTTGGCCTGAGTCCA 61.060 55.000 24.12 24.12 43.19 4.02
2611 4303 0.465460 GTGTGTTGGAGTTGGCCTGA 60.465 55.000 3.32 0.00 0.00 3.86
2616 4308 1.164041 GGGTCGTGTGTTGGAGTTGG 61.164 60.000 0.00 0.00 0.00 3.77
2639 4331 7.176690 ACAAAATCCAGATAAAATTGACGTCCT 59.823 33.333 14.12 0.00 0.00 3.85
2641 4333 7.807907 ACACAAAATCCAGATAAAATTGACGTC 59.192 33.333 9.11 9.11 0.00 4.34
2653 4345 5.476945 GGACCTAAACACACAAAATCCAGAT 59.523 40.000 0.00 0.00 0.00 2.90
2655 4347 4.320202 CGGACCTAAACACACAAAATCCAG 60.320 45.833 0.00 0.00 0.00 3.86
2666 4358 3.593096 CTCCTTTACCGGACCTAAACAC 58.407 50.000 9.46 0.00 0.00 3.32
2668 4360 2.625737 GCTCCTTTACCGGACCTAAAC 58.374 52.381 9.46 0.00 0.00 2.01
2677 4369 1.447314 GGACACCGCTCCTTTACCG 60.447 63.158 0.00 0.00 0.00 4.02
2681 4373 4.699522 GCCGGACACCGCTCCTTT 62.700 66.667 5.05 0.00 46.86 3.11
2689 4381 4.606961 CAAATATACAAATGCCGGACACC 58.393 43.478 5.05 0.00 0.00 4.16
2720 4412 2.258755 GCAAATGTACAAATGCCGGAC 58.741 47.619 19.98 0.00 32.73 4.79
2753 4445 0.657840 CGGCCAGACGAAAATCCATC 59.342 55.000 2.24 0.00 35.47 3.51
2801 4504 4.334552 TGAACTACGGGGGTTAAATTTCC 58.665 43.478 0.00 0.00 0.00 3.13
2810 4513 1.615424 AGGCATGAACTACGGGGGT 60.615 57.895 0.00 0.00 0.00 4.95
2816 4520 2.478831 GCTCTAGCAGGCATGAACTAC 58.521 52.381 0.62 0.00 41.59 2.73
2843 4547 2.546494 GCTGATACATGTGCCGGCC 61.546 63.158 26.77 16.24 0.00 6.13
2847 4551 2.620251 TGTAGGCTGATACATGTGCC 57.380 50.000 15.36 15.36 45.21 5.01
2877 4581 1.670811 GCCGTCATGAAACTATGGGTG 59.329 52.381 0.00 0.00 0.00 4.61
2878 4582 1.280710 TGCCGTCATGAAACTATGGGT 59.719 47.619 0.00 0.00 0.00 4.51
2879 4583 2.036958 TGCCGTCATGAAACTATGGG 57.963 50.000 0.00 0.00 0.00 4.00
2880 4584 4.165779 GTTTTGCCGTCATGAAACTATGG 58.834 43.478 0.00 0.00 0.00 2.74
2881 4585 4.793071 TGTTTTGCCGTCATGAAACTATG 58.207 39.130 0.00 0.00 34.12 2.23
2882 4586 5.446143 TTGTTTTGCCGTCATGAAACTAT 57.554 34.783 0.00 0.00 34.12 2.12
2883 4587 4.902443 TTGTTTTGCCGTCATGAAACTA 57.098 36.364 0.00 0.00 34.12 2.24
2884 4588 3.791973 TTGTTTTGCCGTCATGAAACT 57.208 38.095 0.00 0.00 34.12 2.66
2885 4589 3.862845 ACTTTGTTTTGCCGTCATGAAAC 59.137 39.130 0.00 0.00 33.72 2.78
2886 4590 4.109050 GACTTTGTTTTGCCGTCATGAAA 58.891 39.130 0.00 0.00 0.00 2.69
2887 4591 3.129462 TGACTTTGTTTTGCCGTCATGAA 59.871 39.130 0.00 0.00 30.41 2.57
2888 4592 2.685388 TGACTTTGTTTTGCCGTCATGA 59.315 40.909 0.00 0.00 30.41 3.07
2889 4593 3.077229 TGACTTTGTTTTGCCGTCATG 57.923 42.857 0.00 0.00 30.41 3.07
2890 4594 3.443976 GTTGACTTTGTTTTGCCGTCAT 58.556 40.909 0.00 0.00 34.91 3.06
2891 4595 2.729467 CGTTGACTTTGTTTTGCCGTCA 60.729 45.455 0.00 0.00 33.25 4.35
2892 4596 1.843753 CGTTGACTTTGTTTTGCCGTC 59.156 47.619 0.00 0.00 0.00 4.79
2893 4597 1.468395 CCGTTGACTTTGTTTTGCCGT 60.468 47.619 0.00 0.00 0.00 5.68
2894 4598 1.196200 CCGTTGACTTTGTTTTGCCG 58.804 50.000 0.00 0.00 0.00 5.69
2895 4599 2.190161 GACCGTTGACTTTGTTTTGCC 58.810 47.619 0.00 0.00 0.00 4.52
2896 4600 1.843753 CGACCGTTGACTTTGTTTTGC 59.156 47.619 0.00 0.00 0.00 3.68
2897 4601 2.446282 CCGACCGTTGACTTTGTTTTG 58.554 47.619 0.00 0.00 0.00 2.44
2898 4602 1.202211 GCCGACCGTTGACTTTGTTTT 60.202 47.619 0.00 0.00 0.00 2.43
2899 4603 0.379316 GCCGACCGTTGACTTTGTTT 59.621 50.000 0.00 0.00 0.00 2.83
2900 4604 0.745128 TGCCGACCGTTGACTTTGTT 60.745 50.000 0.00 0.00 0.00 2.83
2901 4605 0.534203 ATGCCGACCGTTGACTTTGT 60.534 50.000 0.00 0.00 0.00 2.83
2902 4606 1.127951 GTATGCCGACCGTTGACTTTG 59.872 52.381 0.00 0.00 0.00 2.77
2903 4607 1.001633 AGTATGCCGACCGTTGACTTT 59.998 47.619 0.00 0.00 0.00 2.66
2904 4608 0.606604 AGTATGCCGACCGTTGACTT 59.393 50.000 0.00 0.00 0.00 3.01
2905 4609 0.606604 AAGTATGCCGACCGTTGACT 59.393 50.000 0.00 0.00 0.00 3.41
2906 4610 0.719465 CAAGTATGCCGACCGTTGAC 59.281 55.000 0.00 0.00 0.00 3.18
2907 4611 3.131326 CAAGTATGCCGACCGTTGA 57.869 52.632 0.00 0.00 0.00 3.18
2942 4646 5.769835 ACCCATGAGACATGAAATATGGTT 58.230 37.500 12.46 0.00 34.64 3.67
2943 4647 5.133322 AGACCCATGAGACATGAAATATGGT 59.867 40.000 12.46 9.67 34.64 3.55
2948 4652 3.432749 CGGAGACCCATGAGACATGAAAT 60.433 47.826 12.46 0.00 0.00 2.17
2959 4663 0.253044 ATGAACCACGGAGACCCATG 59.747 55.000 0.00 0.00 0.00 3.66
2960 4664 0.541863 GATGAACCACGGAGACCCAT 59.458 55.000 0.00 0.00 0.00 4.00
2970 4674 2.033448 TGTGCCGGGATGAACCAC 59.967 61.111 2.18 0.70 41.20 4.16
2972 4676 1.586154 CTTGTGTGCCGGGATGAACC 61.586 60.000 2.18 0.00 38.08 3.62
2982 4686 1.237285 ATTGAGCCGTCTTGTGTGCC 61.237 55.000 0.00 0.00 0.00 5.01
2993 4697 4.550422 TCTCGATCAAGATAATTGAGCCG 58.450 43.478 0.74 5.01 35.45 5.52
2995 4699 7.887996 AGATTCTCGATCAAGATAATTGAGC 57.112 36.000 0.00 0.00 37.22 4.26
3021 4725 9.990360 AGAAGTTGGTTTGAGAAAAAGTAAAAA 57.010 25.926 0.00 0.00 0.00 1.94
3030 4734 7.918562 CCGAAAATAAGAAGTTGGTTTGAGAAA 59.081 33.333 0.00 0.00 0.00 2.52
3036 4740 4.897076 ACCCCGAAAATAAGAAGTTGGTTT 59.103 37.500 0.00 0.00 0.00 3.27
3059 4763 0.674581 CGTGGCCTTGAGCAAGATGA 60.675 55.000 11.61 0.00 46.50 2.92
3061 4765 1.377725 CCGTGGCCTTGAGCAAGAT 60.378 57.895 11.61 0.00 46.50 2.40
3062 4766 2.032528 CCGTGGCCTTGAGCAAGA 59.967 61.111 11.61 0.00 46.50 3.02
3096 4800 5.906113 TGCAAACACCAAAGTAAAAGAGA 57.094 34.783 0.00 0.00 0.00 3.10
3107 4811 0.179062 GCCACCAATGCAAACACCAA 60.179 50.000 0.00 0.00 0.00 3.67
3131 4835 2.834549 TCCAAAGGAAGAAGCTCGAGAT 59.165 45.455 18.75 7.13 0.00 2.75
3139 4843 0.036875 AGGCCGTCCAAAGGAAGAAG 59.963 55.000 0.00 0.00 33.09 2.85
3156 4860 2.987752 GGAAAAGCCGATACCGAGG 58.012 57.895 0.00 0.00 38.22 4.63
3183 4887 2.125326 CGGTCGCTCTGGATACCCA 61.125 63.158 0.00 0.00 40.95 4.51
3184 4888 2.125961 ACGGTCGCTCTGGATACCC 61.126 63.158 0.00 0.00 0.00 3.69
3185 4889 1.065928 CACGGTCGCTCTGGATACC 59.934 63.158 0.00 0.00 0.00 2.73
3186 4890 0.525668 CACACGGTCGCTCTGGATAC 60.526 60.000 0.00 0.00 0.00 2.24
3187 4891 1.807226 CACACGGTCGCTCTGGATA 59.193 57.895 0.00 0.00 0.00 2.59
3188 4892 2.573869 CACACGGTCGCTCTGGAT 59.426 61.111 0.00 0.00 0.00 3.41
3189 4893 4.357947 GCACACGGTCGCTCTGGA 62.358 66.667 0.00 0.00 0.00 3.86
3190 4894 3.939837 ATGCACACGGTCGCTCTGG 62.940 63.158 0.00 0.00 0.00 3.86
3191 4895 2.029288 AATGCACACGGTCGCTCTG 61.029 57.895 0.00 0.00 0.00 3.35
3192 4896 2.029288 CAATGCACACGGTCGCTCT 61.029 57.895 0.00 0.00 0.00 4.09
3193 4897 2.476051 CAATGCACACGGTCGCTC 59.524 61.111 0.00 0.00 0.00 5.03
3194 4898 3.049674 CCAATGCACACGGTCGCT 61.050 61.111 0.00 0.00 0.00 4.93
3195 4899 4.759096 GCCAATGCACACGGTCGC 62.759 66.667 0.00 0.00 37.47 5.19
3196 4900 4.444024 CGCCAATGCACACGGTCG 62.444 66.667 0.00 0.00 37.32 4.79
3197 4901 4.759096 GCGCCAATGCACACGGTC 62.759 66.667 0.00 0.00 37.32 4.79
3199 4903 4.764336 CAGCGCCAATGCACACGG 62.764 66.667 2.29 0.00 37.32 4.94
3200 4904 3.541093 AACAGCGCCAATGCACACG 62.541 57.895 2.29 0.00 37.32 4.49
3201 4905 2.017783 CAACAGCGCCAATGCACAC 61.018 57.895 2.29 0.00 37.32 3.82
3202 4906 2.192187 TCAACAGCGCCAATGCACA 61.192 52.632 2.29 0.00 37.32 4.57
3203 4907 1.730547 GTCAACAGCGCCAATGCAC 60.731 57.895 2.29 0.00 37.32 4.57
3204 4908 2.644418 GTCAACAGCGCCAATGCA 59.356 55.556 2.29 0.00 37.32 3.96
3205 4909 2.126346 GGTCAACAGCGCCAATGC 60.126 61.111 2.29 0.00 0.00 3.56
3206 4910 1.503542 GAGGTCAACAGCGCCAATG 59.496 57.895 2.29 0.00 0.00 2.82
3207 4911 2.034879 CGAGGTCAACAGCGCCAAT 61.035 57.895 2.29 0.00 0.00 3.16
3208 4912 2.664851 CGAGGTCAACAGCGCCAA 60.665 61.111 2.29 0.00 0.00 4.52
3209 4913 4.680237 CCGAGGTCAACAGCGCCA 62.680 66.667 2.29 0.00 0.00 5.69
3210 4914 3.665675 ATCCGAGGTCAACAGCGCC 62.666 63.158 2.29 0.00 0.00 6.53
3211 4915 1.298859 AAATCCGAGGTCAACAGCGC 61.299 55.000 0.00 0.00 0.00 5.92
3212 4916 1.135972 CAAAATCCGAGGTCAACAGCG 60.136 52.381 0.00 0.00 0.00 5.18
3213 4917 1.401539 GCAAAATCCGAGGTCAACAGC 60.402 52.381 0.00 0.00 0.00 4.40
3214 4918 1.200020 GGCAAAATCCGAGGTCAACAG 59.800 52.381 0.00 0.00 0.00 3.16
3215 4919 1.243902 GGCAAAATCCGAGGTCAACA 58.756 50.000 0.00 0.00 0.00 3.33
3235 4939 2.126031 GGTCCTTGTCTCGGCGAC 60.126 66.667 4.99 0.00 43.14 5.19
3236 4940 3.379445 GGGTCCTTGTCTCGGCGA 61.379 66.667 10.14 10.14 0.00 5.54
3237 4941 2.521958 ATTGGGTCCTTGTCTCGGCG 62.522 60.000 0.00 0.00 0.00 6.46
3238 4942 1.026718 CATTGGGTCCTTGTCTCGGC 61.027 60.000 0.00 0.00 0.00 5.54
3239 4943 0.324943 ACATTGGGTCCTTGTCTCGG 59.675 55.000 0.00 0.00 0.00 4.63
3240 4944 1.726853 GACATTGGGTCCTTGTCTCG 58.273 55.000 12.92 0.00 40.83 4.04
3241 4945 1.676014 CCGACATTGGGTCCTTGTCTC 60.676 57.143 15.98 0.35 43.95 3.36
3242 4946 0.324943 CCGACATTGGGTCCTTGTCT 59.675 55.000 15.98 0.00 43.95 3.41
3243 4947 0.676782 CCCGACATTGGGTCCTTGTC 60.677 60.000 11.18 11.18 44.76 3.18
3244 4948 1.378762 CCCGACATTGGGTCCTTGT 59.621 57.895 0.00 0.00 44.76 3.16
3245 4949 4.319133 CCCGACATTGGGTCCTTG 57.681 61.111 0.00 0.00 44.76 3.61
3252 4956 1.904287 TCCAAGAAACCCGACATTGG 58.096 50.000 0.00 0.00 41.45 3.16
3253 4957 3.081061 TCATCCAAGAAACCCGACATTG 58.919 45.455 0.00 0.00 0.00 2.82
3254 4958 3.081804 GTCATCCAAGAAACCCGACATT 58.918 45.455 0.00 0.00 0.00 2.71
3255 4959 2.618045 GGTCATCCAAGAAACCCGACAT 60.618 50.000 0.00 0.00 0.00 3.06
3256 4960 1.271163 GGTCATCCAAGAAACCCGACA 60.271 52.381 0.00 0.00 0.00 4.35
3257 4961 1.450025 GGTCATCCAAGAAACCCGAC 58.550 55.000 0.00 0.00 0.00 4.79
3258 4962 0.326927 GGGTCATCCAAGAAACCCGA 59.673 55.000 0.00 0.00 41.87 5.14
3259 4963 2.868253 GGGTCATCCAAGAAACCCG 58.132 57.895 0.00 0.00 41.87 5.28
3260 4964 0.326927 TCGGGTCATCCAAGAAACCC 59.673 55.000 8.00 8.00 46.61 4.11
3261 4965 1.450025 GTCGGGTCATCCAAGAAACC 58.550 55.000 0.00 0.00 34.36 3.27
3262 4966 1.076332 CGTCGGGTCATCCAAGAAAC 58.924 55.000 0.00 0.00 34.36 2.78
3263 4967 0.672401 GCGTCGGGTCATCCAAGAAA 60.672 55.000 0.00 0.00 34.36 2.52
3264 4968 1.079405 GCGTCGGGTCATCCAAGAA 60.079 57.895 0.00 0.00 34.36 2.52
3265 4969 2.577059 GCGTCGGGTCATCCAAGA 59.423 61.111 0.00 0.00 34.36 3.02
3266 4970 2.511600 GGCGTCGGGTCATCCAAG 60.512 66.667 0.00 0.00 34.36 3.61
3267 4971 2.665089 ATGGCGTCGGGTCATCCAA 61.665 57.895 0.00 0.00 35.65 3.53
3268 4972 3.080765 ATGGCGTCGGGTCATCCA 61.081 61.111 0.00 0.00 35.65 3.41
3271 4975 1.069765 GATGATGGCGTCGGGTCAT 59.930 57.895 1.67 2.55 45.63 3.06
3272 4976 2.296814 CTGATGATGGCGTCGGGTCA 62.297 60.000 1.67 5.78 33.59 4.02
3273 4977 1.592669 CTGATGATGGCGTCGGGTC 60.593 63.158 1.67 1.34 33.59 4.46
3274 4978 2.501128 CTGATGATGGCGTCGGGT 59.499 61.111 1.67 0.00 33.59 5.28
3275 4979 2.969238 GCTGATGATGGCGTCGGG 60.969 66.667 1.67 0.00 36.99 5.14
3276 4980 3.333189 CGCTGATGATGGCGTCGG 61.333 66.667 1.67 0.00 45.34 4.79
3281 4985 3.945434 CACGCCGCTGATGATGGC 61.945 66.667 0.00 0.00 45.39 4.40
3282 4986 3.945434 GCACGCCGCTGATGATGG 61.945 66.667 0.00 0.00 37.77 3.51
3283 4987 2.976692 TAGGCACGCCGCTGATGATG 62.977 60.000 1.61 0.00 41.91 3.07
3284 4988 2.104572 ATAGGCACGCCGCTGATGAT 62.105 55.000 1.61 0.00 41.91 2.45
3285 4989 1.460273 TATAGGCACGCCGCTGATGA 61.460 55.000 1.61 0.00 41.91 2.92
3286 4990 1.006220 TATAGGCACGCCGCTGATG 60.006 57.895 1.61 0.00 41.91 3.07
3287 4991 1.006102 GTATAGGCACGCCGCTGAT 60.006 57.895 1.61 0.00 41.91 2.90
3288 4992 2.415843 GTATAGGCACGCCGCTGA 59.584 61.111 1.61 0.00 41.91 4.26
3289 4993 2.661866 GGTATAGGCACGCCGCTG 60.662 66.667 1.61 0.00 41.91 5.18
3290 4994 2.838225 AGGTATAGGCACGCCGCT 60.838 61.111 1.61 0.00 41.91 5.52
3291 4995 2.355956 GAGGTATAGGCACGCCGC 60.356 66.667 1.61 0.00 41.95 6.53
3292 4996 2.338984 GGAGGTATAGGCACGCCG 59.661 66.667 1.61 0.00 41.95 6.46
3293 4997 1.367840 CTGGAGGTATAGGCACGCC 59.632 63.158 0.00 0.00 0.00 5.68
3294 4998 1.301009 GCTGGAGGTATAGGCACGC 60.301 63.158 0.00 0.00 0.00 5.34
3295 4999 1.367840 GGCTGGAGGTATAGGCACG 59.632 63.158 0.00 0.00 39.11 5.34
3296 5000 2.528134 TGGCTGGAGGTATAGGCAC 58.472 57.895 0.00 0.00 43.45 5.01
3298 5002 0.247736 CGATGGCTGGAGGTATAGGC 59.752 60.000 0.00 0.00 39.67 3.93
3299 5003 0.247736 GCGATGGCTGGAGGTATAGG 59.752 60.000 0.00 0.00 35.83 2.57
3300 5004 3.822607 GCGATGGCTGGAGGTATAG 57.177 57.895 0.00 0.00 35.83 1.31
3312 5016 1.094073 CCAAAGCCAGAGAGCGATGG 61.094 60.000 0.00 0.00 39.73 3.51
3313 5017 0.107993 TCCAAAGCCAGAGAGCGATG 60.108 55.000 0.00 0.00 38.01 3.84
3314 5018 0.835941 ATCCAAAGCCAGAGAGCGAT 59.164 50.000 0.00 0.00 38.01 4.58
3315 5019 0.176680 GATCCAAAGCCAGAGAGCGA 59.823 55.000 0.00 0.00 38.01 4.93
3316 5020 0.813210 GGATCCAAAGCCAGAGAGCG 60.813 60.000 6.95 0.00 38.01 5.03
3317 5021 0.254178 TGGATCCAAAGCCAGAGAGC 59.746 55.000 13.46 0.00 35.57 4.09
3323 5027 2.501723 GTCTACTCTGGATCCAAAGCCA 59.498 50.000 15.37 2.46 39.08 4.75
3324 5028 2.501723 TGTCTACTCTGGATCCAAAGCC 59.498 50.000 15.37 1.72 0.00 4.35
3325 5029 3.526534 GTGTCTACTCTGGATCCAAAGC 58.473 50.000 15.37 0.00 0.00 3.51
3326 5030 3.775202 CGTGTCTACTCTGGATCCAAAG 58.225 50.000 17.00 15.37 0.00 2.77
3327 5031 2.094182 GCGTGTCTACTCTGGATCCAAA 60.094 50.000 17.00 0.43 0.00 3.28
3328 5032 1.476891 GCGTGTCTACTCTGGATCCAA 59.523 52.381 17.00 6.19 0.00 3.53
3329 5033 1.103803 GCGTGTCTACTCTGGATCCA 58.896 55.000 15.27 15.27 0.00 3.41
3330 5034 1.103803 TGCGTGTCTACTCTGGATCC 58.896 55.000 4.20 4.20 0.00 3.36
3331 5035 2.621055 AGATGCGTGTCTACTCTGGATC 59.379 50.000 0.00 0.00 0.00 3.36
3332 5036 2.360483 CAGATGCGTGTCTACTCTGGAT 59.640 50.000 0.00 0.00 31.76 3.41
3333 5037 1.745653 CAGATGCGTGTCTACTCTGGA 59.254 52.381 0.00 0.00 31.76 3.86
3334 5038 1.202348 CCAGATGCGTGTCTACTCTGG 60.202 57.143 2.76 2.76 44.99 3.86
3335 5039 1.745653 TCCAGATGCGTGTCTACTCTG 59.254 52.381 0.00 0.00 34.48 3.35
3336 5040 2.020720 CTCCAGATGCGTGTCTACTCT 58.979 52.381 0.00 0.00 0.00 3.24
3337 5041 1.535015 GCTCCAGATGCGTGTCTACTC 60.535 57.143 0.00 0.00 0.00 2.59
3338 5042 0.457851 GCTCCAGATGCGTGTCTACT 59.542 55.000 0.00 0.00 0.00 2.57
3339 5043 0.528684 GGCTCCAGATGCGTGTCTAC 60.529 60.000 0.00 0.00 0.00 2.59
3340 5044 1.816537 GGCTCCAGATGCGTGTCTA 59.183 57.895 0.00 0.00 0.00 2.59
3341 5045 2.581354 GGCTCCAGATGCGTGTCT 59.419 61.111 0.00 0.00 0.00 3.41
3342 5046 2.887568 CGGCTCCAGATGCGTGTC 60.888 66.667 0.00 0.00 0.00 3.67
3375 5079 3.508840 GTTTGGATCCAGCGGCGG 61.509 66.667 15.53 4.77 0.00 6.13
3376 5080 3.864686 CGTTTGGATCCAGCGGCG 61.865 66.667 24.43 18.56 0.00 6.46
3377 5081 4.179579 GCGTTTGGATCCAGCGGC 62.180 66.667 29.40 22.69 0.00 6.53
3378 5082 2.331893 TTGCGTTTGGATCCAGCGG 61.332 57.895 29.40 18.41 0.00 5.52
3379 5083 1.154225 GTTGCGTTTGGATCCAGCG 60.154 57.895 26.51 26.51 0.00 5.18
3380 5084 0.109597 CAGTTGCGTTTGGATCCAGC 60.110 55.000 15.53 15.65 0.00 4.85
3381 5085 0.523072 CCAGTTGCGTTTGGATCCAG 59.477 55.000 15.53 4.71 36.55 3.86
3382 5086 1.523154 GCCAGTTGCGTTTGGATCCA 61.523 55.000 11.44 11.44 36.55 3.41
3383 5087 1.212751 GCCAGTTGCGTTTGGATCC 59.787 57.895 4.20 4.20 36.55 3.36
3384 5088 4.868195 GCCAGTTGCGTTTGGATC 57.132 55.556 4.54 0.00 36.55 3.36
3393 5097 0.736325 ACGACGTATGAGCCAGTTGC 60.736 55.000 0.00 0.00 41.71 4.17
3394 5098 0.992072 CACGACGTATGAGCCAGTTG 59.008 55.000 0.00 0.00 0.00 3.16
3395 5099 0.885879 TCACGACGTATGAGCCAGTT 59.114 50.000 0.00 0.00 0.00 3.16
3396 5100 0.885879 TTCACGACGTATGAGCCAGT 59.114 50.000 0.00 0.00 0.00 4.00
3397 5101 1.854743 CATTCACGACGTATGAGCCAG 59.145 52.381 0.00 0.00 0.00 4.85
3398 5102 1.921243 CATTCACGACGTATGAGCCA 58.079 50.000 0.00 0.00 0.00 4.75
3399 5103 0.577269 GCATTCACGACGTATGAGCC 59.423 55.000 13.60 0.00 0.00 4.70
3400 5104 0.227234 CGCATTCACGACGTATGAGC 59.773 55.000 13.60 9.15 34.06 4.26
3401 5105 1.252779 CACGCATTCACGACGTATGAG 59.747 52.381 13.60 12.47 38.09 2.90
3402 5106 1.264672 CACGCATTCACGACGTATGA 58.735 50.000 13.60 0.00 38.09 2.15
3403 5107 0.297525 CCACGCATTCACGACGTATG 59.702 55.000 0.00 3.00 38.09 2.39
3404 5108 0.804544 CCCACGCATTCACGACGTAT 60.805 55.000 0.00 0.00 38.09 3.06
3405 5109 1.444724 CCCACGCATTCACGACGTA 60.445 57.895 0.00 0.00 38.09 3.57
3406 5110 2.144833 TACCCACGCATTCACGACGT 62.145 55.000 0.00 0.00 41.45 4.34
3407 5111 1.009903 TTACCCACGCATTCACGACG 61.010 55.000 0.00 0.00 36.70 5.12
3408 5112 1.127951 CTTTACCCACGCATTCACGAC 59.872 52.381 0.00 0.00 36.70 4.34
3409 5113 1.434555 CTTTACCCACGCATTCACGA 58.565 50.000 0.00 0.00 36.70 4.35
3410 5114 0.446222 CCTTTACCCACGCATTCACG 59.554 55.000 0.00 0.00 39.50 4.35
3411 5115 0.170339 GCCTTTACCCACGCATTCAC 59.830 55.000 0.00 0.00 0.00 3.18
3412 5116 1.302383 CGCCTTTACCCACGCATTCA 61.302 55.000 0.00 0.00 0.00 2.57
3413 5117 1.427819 CGCCTTTACCCACGCATTC 59.572 57.895 0.00 0.00 0.00 2.67
3414 5118 3.585856 CGCCTTTACCCACGCATT 58.414 55.556 0.00 0.00 0.00 3.56
3418 5122 3.428282 GGTGCGCCTTTACCCACG 61.428 66.667 9.68 0.00 0.00 4.94
3419 5123 2.033602 AGGTGCGCCTTTACCCAC 59.966 61.111 14.67 0.00 44.18 4.61
3420 5124 2.033448 CAGGTGCGCCTTTACCCA 59.967 61.111 18.42 0.00 44.18 4.51
3421 5125 2.038837 GTCAGGTGCGCCTTTACCC 61.039 63.158 18.42 0.00 44.18 3.69
3422 5126 1.003718 AGTCAGGTGCGCCTTTACC 60.004 57.895 18.42 5.57 44.18 2.85
3423 5127 0.037232 AGAGTCAGGTGCGCCTTTAC 60.037 55.000 18.42 17.72 44.18 2.01
3424 5128 0.246635 GAGAGTCAGGTGCGCCTTTA 59.753 55.000 18.42 4.84 44.18 1.85
3425 5129 1.004440 GAGAGTCAGGTGCGCCTTT 60.004 57.895 18.42 5.12 44.18 3.11
3426 5130 2.659610 GAGAGTCAGGTGCGCCTT 59.340 61.111 18.42 1.27 44.18 4.35
3428 5132 2.527951 ATTGGAGAGTCAGGTGCGCC 62.528 60.000 8.71 8.71 0.00 6.53
3429 5133 1.078848 ATTGGAGAGTCAGGTGCGC 60.079 57.895 0.00 0.00 0.00 6.09
3430 5134 0.803768 CGATTGGAGAGTCAGGTGCG 60.804 60.000 0.00 0.00 0.00 5.34
3431 5135 3.056628 CGATTGGAGAGTCAGGTGC 57.943 57.895 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.