Multiple sequence alignment - TraesCS6D01G264300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G264300 chr6D 100.000 5654 0 0 1 5654 372943829 372949482 0.000000e+00 10442.0
1 TraesCS6D01G264300 chr6A 93.720 4124 167 34 803 4870 515027686 515031773 0.000000e+00 6096.0
2 TraesCS6D01G264300 chr6A 96.143 363 14 0 83 445 514918049 514918411 1.360000e-165 593.0
3 TraesCS6D01G264300 chr6A 85.511 352 23 12 442 788 514918492 514918820 5.420000e-90 342.0
4 TraesCS6D01G264300 chr6A 87.025 316 17 8 5359 5654 515031928 515032239 9.080000e-88 335.0
5 TraesCS6D01G264300 chr6A 97.059 34 1 0 4850 4883 524307040 524307007 2.200000e-04 58.4
6 TraesCS6D01G264300 chr6B 91.835 1886 90 24 861 2722 558930171 558928326 0.000000e+00 2571.0
7 TraesCS6D01G264300 chr6B 94.444 1368 55 14 3174 4536 558927801 558926450 0.000000e+00 2085.0
8 TraesCS6D01G264300 chr6B 93.269 416 14 3 2721 3124 558928202 558927789 8.110000e-168 601.0
9 TraesCS6D01G264300 chr6B 93.709 302 18 1 144 445 558938997 558938697 8.640000e-123 451.0
10 TraesCS6D01G264300 chr6B 96.250 160 5 1 1 159 558939172 558939013 1.560000e-65 261.0
11 TraesCS6D01G264300 chr6B 83.333 252 24 12 5405 5654 558926433 558926198 3.430000e-52 217.0
12 TraesCS6D01G264300 chr5D 86.356 1224 104 27 1920 3104 174307385 174308584 0.000000e+00 1277.0
13 TraesCS6D01G264300 chr5D 86.359 1063 95 26 3297 4330 174312335 174313376 0.000000e+00 1114.0
14 TraesCS6D01G264300 chr5D 82.870 216 20 5 4486 4700 174316134 174316333 1.620000e-40 178.0
15 TraesCS6D01G264300 chr5A 86.872 876 87 16 1593 2445 198142555 198143425 0.000000e+00 955.0
16 TraesCS6D01G264300 chr5A 86.708 489 34 15 1061 1522 198141615 198142099 1.090000e-141 514.0
17 TraesCS6D01G264300 chr5A 90.647 278 18 4 2443 2718 198143768 198144039 4.160000e-96 363.0
18 TraesCS6D01G264300 chr5A 87.226 274 31 3 4988 5259 362376154 362375883 5.500000e-80 309.0
19 TraesCS6D01G264300 chr2B 77.574 816 98 37 2073 2834 625008107 625007323 1.130000e-111 414.0
20 TraesCS6D01G264300 chr4B 89.811 265 26 1 4993 5256 128533899 128533635 7.020000e-89 339.0
21 TraesCS6D01G264300 chr4B 88.764 267 29 1 4994 5259 38277675 38277409 5.460000e-85 326.0
22 TraesCS6D01G264300 chr1B 89.057 265 28 1 4995 5258 510052714 510052978 1.520000e-85 327.0
23 TraesCS6D01G264300 chr7A 89.189 259 26 2 4998 5254 502668884 502669142 7.070000e-84 322.0
24 TraesCS6D01G264300 chr7A 88.846 260 27 2 4996 5254 519203336 519203078 9.140000e-83 318.0
25 TraesCS6D01G264300 chr7A 87.970 266 31 1 5001 5265 418104755 418104490 4.250000e-81 313.0
26 TraesCS6D01G264300 chr7A 97.059 34 1 0 4850 4883 80707347 80707380 2.200000e-04 58.4
27 TraesCS6D01G264300 chr5B 88.679 265 27 2 4995 5257 141501057 141500794 2.540000e-83 320.0
28 TraesCS6D01G264300 chr5B 100.000 30 0 0 4854 4883 37506515 37506486 7.910000e-04 56.5
29 TraesCS6D01G264300 chr7B 88.593 263 29 1 4994 5255 43654927 43655189 9.140000e-83 318.0
30 TraesCS6D01G264300 chr7B 97.059 34 0 1 4850 4883 23412080 23412112 7.910000e-04 56.5
31 TraesCS6D01G264300 chr7D 79.167 240 38 7 208 442 79531416 79531648 7.580000e-34 156.0
32 TraesCS6D01G264300 chr7D 94.595 37 2 0 4847 4883 76570023 76570059 2.200000e-04 58.4
33 TraesCS6D01G264300 chr7D 100.000 30 0 0 4850 4879 76630014 76630043 7.910000e-04 56.5
34 TraesCS6D01G264300 chr3D 81.443 97 9 8 4792 4880 563049569 563049664 2.830000e-08 71.3
35 TraesCS6D01G264300 chr1A 100.000 33 0 0 4850 4882 539874165 539874133 1.700000e-05 62.1
36 TraesCS6D01G264300 chr4D 100.000 30 0 0 4854 4883 43647980 43647951 7.910000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G264300 chr6D 372943829 372949482 5653 False 10442.000000 10442 100.000000 1 5654 1 chr6D.!!$F1 5653
1 TraesCS6D01G264300 chr6A 515027686 515032239 4553 False 3215.500000 6096 90.372500 803 5654 2 chr6A.!!$F2 4851
2 TraesCS6D01G264300 chr6A 514918049 514918820 771 False 467.500000 593 90.827000 83 788 2 chr6A.!!$F1 705
3 TraesCS6D01G264300 chr6B 558926198 558930171 3973 True 1368.500000 2571 90.720250 861 5654 4 chr6B.!!$R1 4793
4 TraesCS6D01G264300 chr5D 174307385 174316333 8948 False 856.333333 1277 85.195000 1920 4700 3 chr5D.!!$F1 2780
5 TraesCS6D01G264300 chr5A 198141615 198144039 2424 False 610.666667 955 88.075667 1061 2718 3 chr5A.!!$F1 1657
6 TraesCS6D01G264300 chr2B 625007323 625008107 784 True 414.000000 414 77.574000 2073 2834 1 chr2B.!!$R1 761

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
635 724 0.097674 CAATGGAAAAGCCTCTCGCG 59.902 55.000 0.00 0.0 44.76 5.87 F
960 1072 1.003718 GCCCATATACCCTCGTGGC 60.004 63.158 0.00 0.0 37.83 5.01 F
1671 2248 1.241315 GCCTTGCGCCCTAAAAGTGA 61.241 55.000 4.18 0.0 0.00 3.41 F
2096 2674 0.704076 CATCAAGGGTGGGGAGGAAA 59.296 55.000 0.00 0.0 0.00 3.13 F
3282 7877 0.837691 TTTGCCTGCTCTCTCTCCCA 60.838 55.000 0.00 0.0 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 2372 1.768275 ACACGATCCATCTTGCCCATA 59.232 47.619 0.00 0.00 30.00 2.74 R
1800 2378 2.094026 TCTCCACACACGATCCATCTTG 60.094 50.000 0.00 0.00 32.87 3.02 R
3537 8261 3.584848 AGCTATTAACTGATAGGGCCTGG 59.415 47.826 18.53 6.21 31.62 4.45 R
3946 8691 0.540597 AAGGGCTTGCTTGAGTTCCC 60.541 55.000 0.00 0.00 0.00 3.97 R
4709 12062 0.037590 TACACATGGCACTTCCCCAC 59.962 55.000 0.00 0.00 34.68 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.652300 TCACAGTTGCACTACTTACTATTTG 57.348 36.000 0.00 0.00 0.00 2.32
26 27 7.438564 TCACAGTTGCACTACTTACTATTTGA 58.561 34.615 0.00 0.00 0.00 2.69
27 28 8.094548 TCACAGTTGCACTACTTACTATTTGAT 58.905 33.333 0.00 0.00 0.00 2.57
28 29 8.171196 CACAGTTGCACTACTTACTATTTGATG 58.829 37.037 0.00 0.00 0.00 3.07
29 30 7.148407 ACAGTTGCACTACTTACTATTTGATGC 60.148 37.037 0.00 0.00 0.00 3.91
30 31 6.878923 AGTTGCACTACTTACTATTTGATGCA 59.121 34.615 0.00 0.00 38.69 3.96
31 32 7.554118 AGTTGCACTACTTACTATTTGATGCAT 59.446 33.333 0.00 0.00 40.01 3.96
32 33 7.864108 TGCACTACTTACTATTTGATGCATT 57.136 32.000 0.00 0.00 35.74 3.56
33 34 8.279970 TGCACTACTTACTATTTGATGCATTT 57.720 30.769 0.00 0.00 35.74 2.32
34 35 8.739039 TGCACTACTTACTATTTGATGCATTTT 58.261 29.630 0.00 0.00 35.74 1.82
40 41 9.956720 ACTTACTATTTGATGCATTTTAGATGC 57.043 29.630 0.00 0.41 44.76 3.91
164 165 6.147864 TCAACCTTTTTCTCCATTGTTCTG 57.852 37.500 0.00 0.00 0.00 3.02
177 178 3.878086 TTGTTCTGTTTCAGCGATGAC 57.122 42.857 1.08 0.00 0.00 3.06
186 187 1.122227 TCAGCGATGACATGGATCCA 58.878 50.000 18.88 18.88 0.00 3.41
257 258 4.039730 TGCTGATACTATCTCCCTTGAAGC 59.960 45.833 0.00 0.00 0.00 3.86
267 268 3.072944 CTCCCTTGAAGCTGTGAAAGAG 58.927 50.000 0.00 0.00 0.00 2.85
308 309 1.992519 GCCTCCATGGATGAGCACCT 61.993 60.000 20.12 0.00 38.35 4.00
392 393 3.571401 AGTCATCCTGCCTTTTCTGTTTG 59.429 43.478 0.00 0.00 0.00 2.93
451 537 1.211949 GATGCTTGGGGTGCCTACTAA 59.788 52.381 0.00 0.00 0.00 2.24
462 548 5.304357 GGGGTGCCTACTAAAATAATGCATT 59.696 40.000 17.56 17.56 0.00 3.56
470 556 6.849085 ACTAAAATAATGCATTGGTGGTCA 57.151 33.333 22.27 0.00 0.00 4.02
482 568 1.376037 GTGGTCACCTAGTGGCTGC 60.376 63.158 0.00 0.00 38.33 5.25
493 579 3.445096 CCTAGTGGCTGCTTATTGCTTTT 59.555 43.478 0.00 0.00 43.37 2.27
589 678 5.771153 ACTATAGTCTAAGGTTTCGAGCC 57.229 43.478 0.00 0.37 0.00 4.70
590 679 4.583907 ACTATAGTCTAAGGTTTCGAGCCC 59.416 45.833 0.00 0.00 0.00 5.19
591 680 1.939980 AGTCTAAGGTTTCGAGCCCT 58.060 50.000 4.72 2.15 0.00 5.19
592 681 1.550976 AGTCTAAGGTTTCGAGCCCTG 59.449 52.381 5.79 0.00 0.00 4.45
593 682 0.902531 TCTAAGGTTTCGAGCCCTGG 59.097 55.000 5.79 3.44 0.00 4.45
594 683 0.744771 CTAAGGTTTCGAGCCCTGGC 60.745 60.000 0.00 0.00 42.33 4.85
595 684 1.485294 TAAGGTTTCGAGCCCTGGCA 61.485 55.000 11.38 0.00 44.88 4.92
596 685 2.747855 GGTTTCGAGCCCTGGCAG 60.748 66.667 11.38 7.75 44.88 4.85
597 686 2.747855 GTTTCGAGCCCTGGCAGG 60.748 66.667 27.04 27.04 44.88 4.85
598 687 3.249189 TTTCGAGCCCTGGCAGGT 61.249 61.111 30.68 14.83 44.88 4.00
599 688 2.829384 TTTCGAGCCCTGGCAGGTT 61.829 57.895 30.68 19.18 44.88 3.50
600 689 2.351924 TTTCGAGCCCTGGCAGGTTT 62.352 55.000 30.68 18.81 44.88 3.27
601 690 1.485294 TTCGAGCCCTGGCAGGTTTA 61.485 55.000 30.68 9.73 44.88 2.01
602 691 1.224592 CGAGCCCTGGCAGGTTTAT 59.775 57.895 30.68 14.12 44.88 1.40
603 692 0.468226 CGAGCCCTGGCAGGTTTATA 59.532 55.000 30.68 0.00 44.88 0.98
604 693 1.541233 CGAGCCCTGGCAGGTTTATAG 60.541 57.143 30.68 15.99 44.88 1.31
605 694 1.490910 GAGCCCTGGCAGGTTTATAGT 59.509 52.381 30.68 7.88 44.88 2.12
606 695 2.704065 GAGCCCTGGCAGGTTTATAGTA 59.296 50.000 30.68 0.00 44.88 1.82
607 696 3.327439 AGCCCTGGCAGGTTTATAGTAT 58.673 45.455 30.68 6.10 44.88 2.12
608 697 4.499472 AGCCCTGGCAGGTTTATAGTATA 58.501 43.478 30.68 0.00 44.88 1.47
609 698 4.532521 AGCCCTGGCAGGTTTATAGTATAG 59.467 45.833 30.68 12.61 44.88 1.31
612 701 6.351117 GCCCTGGCAGGTTTATAGTATAGTAG 60.351 46.154 30.68 11.35 41.49 2.57
631 720 4.476479 AGTAGGATCAATGGAAAAGCCTCT 59.524 41.667 0.00 0.00 37.63 3.69
635 724 0.097674 CAATGGAAAAGCCTCTCGCG 59.902 55.000 0.00 0.00 44.76 5.87
663 752 6.072175 TGTGAAGCTATGTAAATTGTGTTCCC 60.072 38.462 0.00 0.00 0.00 3.97
668 757 6.157994 AGCTATGTAAATTGTGTTCCCCTCTA 59.842 38.462 0.00 0.00 0.00 2.43
688 777 5.850614 TCTAGACTTGTGTTCTAAACCCAC 58.149 41.667 0.00 0.00 0.00 4.61
689 778 4.497291 AGACTTGTGTTCTAAACCCACA 57.503 40.909 0.00 0.00 37.32 4.17
707 797 4.516323 CCACATGGTGACTTGATGTGATA 58.484 43.478 18.10 0.00 46.60 2.15
712 802 6.319658 ACATGGTGACTTGATGTGATATTTCC 59.680 38.462 0.00 0.00 38.76 3.13
731 821 7.915293 ATTTCCACAACTATAAATCACGTGA 57.085 32.000 22.48 22.48 0.00 4.35
740 830 6.493116 ACTATAAATCACGTGAGACTAACGG 58.507 40.000 24.41 11.53 45.20 4.44
741 831 3.928727 AAATCACGTGAGACTAACGGA 57.071 42.857 24.41 10.89 45.20 4.69
747 837 5.575957 TCACGTGAGACTAACGGAAATATC 58.424 41.667 15.76 0.00 45.20 1.63
775 865 8.846943 TGACAATGCTGATAGAAAACTAAAGA 57.153 30.769 0.00 0.00 0.00 2.52
814 904 2.362397 TGAGGAGATGCTATGAACCGTC 59.638 50.000 0.00 0.00 0.00 4.79
827 917 6.035112 GCTATGAACCGTCTTTTAGAGTTCAG 59.965 42.308 13.44 6.04 46.98 3.02
829 919 5.047847 TGAACCGTCTTTTAGAGTTCAGTG 58.952 41.667 7.17 0.00 41.25 3.66
843 933 7.681939 AGAGTTCAGTGTTTAAACTTTGACA 57.318 32.000 18.72 10.09 33.54 3.58
844 934 8.281212 AGAGTTCAGTGTTTAAACTTTGACAT 57.719 30.769 18.72 12.06 33.54 3.06
845 935 8.739972 AGAGTTCAGTGTTTAAACTTTGACATT 58.260 29.630 18.72 9.83 33.54 2.71
846 936 9.997482 GAGTTCAGTGTTTAAACTTTGACATTA 57.003 29.630 18.72 5.58 33.54 1.90
898 989 3.172229 TGCCCTAAGTTGTGTTTTTGC 57.828 42.857 0.00 0.00 0.00 3.68
960 1072 1.003718 GCCCATATACCCTCGTGGC 60.004 63.158 0.00 0.00 37.83 5.01
1106 1228 2.487746 AAAAGAAACCCCACCACCAT 57.512 45.000 0.00 0.00 0.00 3.55
1215 1343 4.394712 CGTGGCTGTCCTGTCCCC 62.395 72.222 0.00 0.00 0.00 4.81
1386 1514 2.660064 CCTCTCCCCCGAACACCTG 61.660 68.421 0.00 0.00 0.00 4.00
1428 1573 3.003173 GCCCTTCCCCTTTTGCCC 61.003 66.667 0.00 0.00 0.00 5.36
1535 1693 6.646240 TGTACTGGTAGATAACAAACGGTTTC 59.354 38.462 2.51 0.00 40.96 2.78
1606 2183 6.466812 AGGATGAAAACAATGGAACCAAATC 58.533 36.000 0.00 0.00 0.00 2.17
1648 2225 5.397360 TCTGGAACCATGAGATATGCTCTA 58.603 41.667 0.00 0.00 44.27 2.43
1671 2248 1.241315 GCCTTGCGCCCTAAAAGTGA 61.241 55.000 4.18 0.00 0.00 3.41
1794 2372 2.091555 ACGGGGCATATTAATGGGTTGT 60.092 45.455 0.00 0.00 33.38 3.32
1800 2378 4.081697 GGCATATTAATGGGTTGTATGGGC 60.082 45.833 0.00 0.00 33.38 5.36
2022 2600 5.567423 GCAGGTTGGAAAATAGCAGAAACAT 60.567 40.000 0.00 0.00 0.00 2.71
2026 2604 6.446318 GTTGGAAAATAGCAGAAACATGTGA 58.554 36.000 0.00 0.00 0.00 3.58
2047 2625 6.841229 TGTGAGATATTTAGACCATCCTGTCT 59.159 38.462 0.00 0.00 46.90 3.41
2096 2674 0.704076 CATCAAGGGTGGGGAGGAAA 59.296 55.000 0.00 0.00 0.00 3.13
2097 2675 1.288932 CATCAAGGGTGGGGAGGAAAT 59.711 52.381 0.00 0.00 0.00 2.17
2138 2717 6.534634 ACTTCTGTATTCAAAAGGCTAGTGT 58.465 36.000 0.00 0.00 0.00 3.55
2176 2756 6.069673 TCTCACATATTGTCCTGTTAACCCAT 60.070 38.462 2.48 0.00 0.00 4.00
2686 3636 8.870160 TCCATTGAAATTGAACTTTGTTACAG 57.130 30.769 0.00 0.00 0.00 2.74
2687 3637 8.474025 TCCATTGAAATTGAACTTTGTTACAGT 58.526 29.630 0.00 0.00 0.00 3.55
2688 3638 8.755018 CCATTGAAATTGAACTTTGTTACAGTC 58.245 33.333 0.00 0.00 0.00 3.51
2689 3639 9.520204 CATTGAAATTGAACTTTGTTACAGTCT 57.480 29.630 0.00 0.00 0.00 3.24
2690 3640 9.736023 ATTGAAATTGAACTTTGTTACAGTCTC 57.264 29.630 0.00 0.00 0.00 3.36
3117 7712 2.163010 GCTGCACAAAGTAGACATGCAT 59.837 45.455 0.00 0.00 44.73 3.96
3124 7719 6.252015 GCACAAAGTAGACATGCATAACAATG 59.748 38.462 0.00 2.28 36.30 2.82
3282 7877 0.837691 TTTGCCTGCTCTCTCTCCCA 60.838 55.000 0.00 0.00 0.00 4.37
3293 7888 4.688321 GCTCTCTCTCCCATTAAGCCAAAT 60.688 45.833 0.00 0.00 0.00 2.32
3295 7890 6.746614 GCTCTCTCTCCCATTAAGCCAAATAT 60.747 42.308 0.00 0.00 0.00 1.28
3537 8261 3.706698 TGCTGTATCATCACGCTAACTC 58.293 45.455 0.00 0.00 0.00 3.01
3561 8285 5.456763 CCAGGCCCTATCAGTTAATAGCTTT 60.457 44.000 0.00 0.00 0.00 3.51
3832 8577 5.941555 TTGTTTGTTCAAACCCACCTATT 57.058 34.783 20.74 0.00 31.87 1.73
3946 8691 3.057946 GGCTTGAAGACTACAAAGCAAGG 60.058 47.826 14.91 0.00 34.78 3.61
4243 8988 0.600255 CGACGACAAAGCTTCCCAGT 60.600 55.000 0.00 0.00 0.00 4.00
4249 8994 1.152756 AAAGCTTCCCAGTGCGGTT 60.153 52.632 0.00 0.00 0.00 4.44
4259 9004 1.535462 CCAGTGCGGTTAACCTGAAAG 59.465 52.381 22.12 7.54 0.00 2.62
4281 9026 1.207329 ACTGCCGAGAATGGAACTACC 59.793 52.381 0.00 0.00 39.54 3.18
4282 9027 0.174845 TGCCGAGAATGGAACTACCG 59.825 55.000 0.00 0.00 42.61 4.02
4283 9028 0.458669 GCCGAGAATGGAACTACCGA 59.541 55.000 0.00 0.00 42.61 4.69
4284 9029 1.536284 GCCGAGAATGGAACTACCGAG 60.536 57.143 0.00 0.00 42.61 4.63
4369 9115 1.202687 CCTGACTTTGCTGAGTGGTCA 60.203 52.381 0.00 0.00 35.90 4.02
4379 9125 3.133542 TGCTGAGTGGTCATTCATCCTAG 59.866 47.826 0.00 0.00 30.18 3.02
4381 9127 4.739137 GCTGAGTGGTCATTCATCCTAGTC 60.739 50.000 0.00 0.00 30.18 2.59
4428 9174 1.878102 CGAACCAAGTTCCCAGGACTG 60.878 57.143 2.06 0.00 39.14 3.51
4429 9175 0.178990 AACCAAGTTCCCAGGACTGC 60.179 55.000 0.00 0.00 0.00 4.40
4431 9177 0.984230 CCAAGTTCCCAGGACTGCTA 59.016 55.000 0.00 0.00 0.00 3.49
4432 9178 1.065854 CCAAGTTCCCAGGACTGCTAG 60.066 57.143 0.00 0.00 0.00 3.42
4433 9179 1.902508 CAAGTTCCCAGGACTGCTAGA 59.097 52.381 0.00 0.00 0.00 2.43
4434 9180 1.859302 AGTTCCCAGGACTGCTAGAG 58.141 55.000 0.00 0.00 0.00 2.43
4437 9183 2.079170 TCCCAGGACTGCTAGAGATG 57.921 55.000 0.00 0.00 0.00 2.90
4444 9190 4.022935 CAGGACTGCTAGAGATGCTCTAAG 60.023 50.000 5.75 4.24 41.74 2.18
4586 11936 5.416639 TGTTTCAGATCCTGATGACAATTGG 59.583 40.000 10.83 0.00 40.39 3.16
4638 11988 2.020720 CAGCTGTGTGGTGTTTTGGTA 58.979 47.619 5.25 0.00 39.17 3.25
4652 12002 7.995488 TGGTGTTTTGGTATTTTCCATTTGATT 59.005 29.630 0.00 0.00 37.33 2.57
4659 12009 7.915930 TGGTATTTTCCATTTGATTTGATGGT 58.084 30.769 2.64 0.00 42.72 3.55
4675 12025 8.702163 ATTTGATGGTTGTAAATCGGAAAATC 57.298 30.769 0.00 0.00 0.00 2.17
4694 12047 7.043325 GGAAAATCGTATCTCCGTGCATATATC 60.043 40.741 0.00 0.00 0.00 1.63
4695 12048 6.701145 AATCGTATCTCCGTGCATATATCT 57.299 37.500 0.00 0.00 0.00 1.98
4696 12049 5.485662 TCGTATCTCCGTGCATATATCTG 57.514 43.478 0.00 0.00 0.00 2.90
4697 12050 5.183228 TCGTATCTCCGTGCATATATCTGA 58.817 41.667 0.00 0.00 0.00 3.27
4698 12051 5.064834 TCGTATCTCCGTGCATATATCTGAC 59.935 44.000 0.00 0.00 0.00 3.51
4699 12052 5.065346 CGTATCTCCGTGCATATATCTGACT 59.935 44.000 0.00 0.00 0.00 3.41
4700 12053 5.991933 ATCTCCGTGCATATATCTGACTT 57.008 39.130 0.00 0.00 0.00 3.01
4701 12054 5.126396 TCTCCGTGCATATATCTGACTTG 57.874 43.478 0.00 0.00 0.00 3.16
4702 12055 3.653344 TCCGTGCATATATCTGACTTGC 58.347 45.455 0.00 0.00 0.00 4.01
4703 12056 3.069443 TCCGTGCATATATCTGACTTGCA 59.931 43.478 0.00 0.00 40.73 4.08
4704 12057 3.431233 CCGTGCATATATCTGACTTGCAG 59.569 47.826 0.00 0.00 43.34 4.41
4705 12058 4.053983 CGTGCATATATCTGACTTGCAGT 58.946 43.478 0.00 0.00 43.34 4.40
4706 12059 4.509230 CGTGCATATATCTGACTTGCAGTT 59.491 41.667 0.00 0.00 43.34 3.16
4707 12060 5.332883 CGTGCATATATCTGACTTGCAGTTC 60.333 44.000 0.00 0.00 43.34 3.01
4708 12061 5.757320 GTGCATATATCTGACTTGCAGTTCT 59.243 40.000 0.00 0.00 43.34 3.01
4709 12062 5.756833 TGCATATATCTGACTTGCAGTTCTG 59.243 40.000 0.00 0.00 45.14 3.02
4710 12063 5.757320 GCATATATCTGACTTGCAGTTCTGT 59.243 40.000 1.78 0.00 45.14 3.41
4711 12064 6.292757 GCATATATCTGACTTGCAGTTCTGTG 60.293 42.308 1.78 0.00 45.14 3.66
4712 12065 2.245159 TCTGACTTGCAGTTCTGTGG 57.755 50.000 1.78 0.00 45.14 4.17
4713 12066 1.202687 TCTGACTTGCAGTTCTGTGGG 60.203 52.381 1.78 0.00 45.14 4.61
4714 12067 0.179020 TGACTTGCAGTTCTGTGGGG 60.179 55.000 1.78 0.00 0.00 4.96
4715 12068 0.108585 GACTTGCAGTTCTGTGGGGA 59.891 55.000 1.78 0.00 0.00 4.81
4716 12069 0.550914 ACTTGCAGTTCTGTGGGGAA 59.449 50.000 1.78 0.00 0.00 3.97
4717 12070 1.242076 CTTGCAGTTCTGTGGGGAAG 58.758 55.000 1.78 0.00 0.00 3.46
4718 12071 0.550914 TTGCAGTTCTGTGGGGAAGT 59.449 50.000 1.78 0.00 0.00 3.01
4719 12072 0.179020 TGCAGTTCTGTGGGGAAGTG 60.179 55.000 7.45 7.45 44.76 3.16
4720 12073 2.633860 CAGTTCTGTGGGGAAGTGC 58.366 57.895 0.00 0.00 39.01 4.40
4723 12076 0.251341 GTTCTGTGGGGAAGTGCCAT 60.251 55.000 0.00 0.00 38.95 4.40
4734 12087 3.558321 GGGAAGTGCCATGTGTAACTGTA 60.558 47.826 0.00 0.00 38.95 2.74
4754 12107 7.716612 ACTGTAAATATAGCTGAAAATTGGCC 58.283 34.615 0.00 0.00 0.00 5.36
4761 12114 1.278537 CTGAAAATTGGCCCCCACAT 58.721 50.000 0.00 0.00 30.78 3.21
4763 12116 2.040145 CTGAAAATTGGCCCCCACATTT 59.960 45.455 0.00 0.00 30.78 2.32
4764 12117 3.251484 TGAAAATTGGCCCCCACATTTA 58.749 40.909 0.00 0.00 30.78 1.40
4766 12119 3.998913 AAATTGGCCCCCACATTTAAG 57.001 42.857 0.00 0.00 30.78 1.85
4767 12120 2.938428 ATTGGCCCCCACATTTAAGA 57.062 45.000 0.00 0.00 30.78 2.10
4768 12121 2.704190 TTGGCCCCCACATTTAAGAA 57.296 45.000 0.00 0.00 30.78 2.52
4769 12122 2.704190 TGGCCCCCACATTTAAGAAA 57.296 45.000 0.00 0.00 0.00 2.52
4791 12144 5.815233 ACTAGATGATACCTTGACATGGG 57.185 43.478 11.77 3.22 0.00 4.00
4814 12167 9.902684 TGGGAATTGATTGCAATATGTTTAAAT 57.097 25.926 12.97 1.78 43.71 1.40
4930 12283 7.169158 ACAGAAATTGTTGAGTCTTTTTCCA 57.831 32.000 0.00 0.00 36.31 3.53
4931 12284 7.785033 ACAGAAATTGTTGAGTCTTTTTCCAT 58.215 30.769 0.00 0.00 36.31 3.41
4932 12285 7.707893 ACAGAAATTGTTGAGTCTTTTTCCATG 59.292 33.333 0.00 0.00 36.31 3.66
4933 12286 6.703165 AGAAATTGTTGAGTCTTTTTCCATGC 59.297 34.615 0.00 0.00 0.00 4.06
4934 12287 4.998671 TTGTTGAGTCTTTTTCCATGCA 57.001 36.364 0.00 0.00 0.00 3.96
4965 12318 6.903883 ATGCTGAGGTAATAAGTTTACACG 57.096 37.500 0.00 0.00 0.00 4.49
4966 12319 5.786311 TGCTGAGGTAATAAGTTTACACGT 58.214 37.500 0.00 0.00 0.00 4.49
4967 12320 5.636121 TGCTGAGGTAATAAGTTTACACGTG 59.364 40.000 15.48 15.48 0.00 4.49
4968 12321 5.865552 GCTGAGGTAATAAGTTTACACGTGA 59.134 40.000 25.01 2.68 0.00 4.35
4969 12322 6.034683 GCTGAGGTAATAAGTTTACACGTGAG 59.965 42.308 25.01 3.47 0.00 3.51
4970 12323 7.218228 TGAGGTAATAAGTTTACACGTGAGA 57.782 36.000 25.01 6.70 0.00 3.27
4971 12324 7.660112 TGAGGTAATAAGTTTACACGTGAGAA 58.340 34.615 25.01 12.98 0.00 2.87
4972 12325 8.143193 TGAGGTAATAAGTTTACACGTGAGAAA 58.857 33.333 25.01 18.17 0.00 2.52
4973 12326 9.148104 GAGGTAATAAGTTTACACGTGAGAAAT 57.852 33.333 25.01 12.35 0.00 2.17
4981 12334 9.485206 AAGTTTACACGTGAGAAATATGTTAGT 57.515 29.630 25.01 0.00 0.00 2.24
4982 12335 8.922676 AGTTTACACGTGAGAAATATGTTAGTG 58.077 33.333 25.01 0.00 0.00 2.74
4983 12336 8.918658 GTTTACACGTGAGAAATATGTTAGTGA 58.081 33.333 25.01 0.00 0.00 3.41
4984 12337 8.683550 TTACACGTGAGAAATATGTTAGTGAG 57.316 34.615 25.01 0.00 0.00 3.51
4986 12339 7.548097 ACACGTGAGAAATATGTTAGTGAGAT 58.452 34.615 25.01 0.00 0.00 2.75
4987 12340 7.702772 ACACGTGAGAAATATGTTAGTGAGATC 59.297 37.037 25.01 0.00 0.00 2.75
5003 12356 4.894114 GTGAGATCACTTACTTAGGGCCTA 59.106 45.833 9.81 9.81 43.25 3.93
5004 12357 5.540719 GTGAGATCACTTACTTAGGGCCTAT 59.459 44.000 15.37 2.58 43.25 2.57
5006 12359 6.615726 TGAGATCACTTACTTAGGGCCTATTT 59.384 38.462 15.37 6.88 0.00 1.40
5007 12360 6.831976 AGATCACTTACTTAGGGCCTATTTG 58.168 40.000 15.37 10.31 0.00 2.32
5010 12363 5.252164 TCACTTACTTAGGGCCTATTTGGTT 59.748 40.000 15.37 0.00 38.35 3.67
5011 12364 5.949952 CACTTACTTAGGGCCTATTTGGTTT 59.050 40.000 15.37 0.00 38.35 3.27
5012 12365 7.037442 TCACTTACTTAGGGCCTATTTGGTTTA 60.037 37.037 15.37 0.00 38.35 2.01
5013 12366 7.778382 CACTTACTTAGGGCCTATTTGGTTTAT 59.222 37.037 15.37 0.00 38.35 1.40
5015 12368 6.335781 ACTTAGGGCCTATTTGGTTTATGA 57.664 37.500 15.37 0.00 38.35 2.15
5017 12370 4.881157 AGGGCCTATTTGGTTTATGACT 57.119 40.909 2.82 0.00 38.35 3.41
5018 12371 5.987019 AGGGCCTATTTGGTTTATGACTA 57.013 39.130 2.82 0.00 38.35 2.59
5019 12372 6.335781 AGGGCCTATTTGGTTTATGACTAA 57.664 37.500 2.82 0.00 38.35 2.24
5020 12373 6.127101 AGGGCCTATTTGGTTTATGACTAAC 58.873 40.000 2.82 0.00 38.35 2.34
5021 12374 6.069029 AGGGCCTATTTGGTTTATGACTAACT 60.069 38.462 2.82 0.00 38.35 2.24
5023 12376 7.123697 GGGCCTATTTGGTTTATGACTAACTTT 59.876 37.037 0.84 0.00 38.35 2.66
5024 12377 7.973944 GGCCTATTTGGTTTATGACTAACTTTG 59.026 37.037 0.00 0.00 38.35 2.77
5025 12378 7.488150 GCCTATTTGGTTTATGACTAACTTTGC 59.512 37.037 0.00 0.00 38.35 3.68
5026 12379 7.973944 CCTATTTGGTTTATGACTAACTTTGCC 59.026 37.037 0.00 0.00 0.00 4.52
5027 12380 6.716934 TTTGGTTTATGACTAACTTTGCCA 57.283 33.333 0.00 0.00 0.00 4.92
5028 12381 5.699097 TGGTTTATGACTAACTTTGCCAC 57.301 39.130 0.00 0.00 0.00 5.01
5029 12382 5.133941 TGGTTTATGACTAACTTTGCCACA 58.866 37.500 0.00 0.00 0.00 4.17
5030 12383 5.594725 TGGTTTATGACTAACTTTGCCACAA 59.405 36.000 0.00 0.00 0.00 3.33
5031 12384 5.918576 GGTTTATGACTAACTTTGCCACAAC 59.081 40.000 0.00 0.00 0.00 3.32
5032 12385 6.238925 GGTTTATGACTAACTTTGCCACAACT 60.239 38.462 0.00 0.00 0.00 3.16
5033 12386 7.040961 GGTTTATGACTAACTTTGCCACAACTA 60.041 37.037 0.00 0.00 0.00 2.24
5034 12387 8.347035 GTTTATGACTAACTTTGCCACAACTAA 58.653 33.333 0.00 0.00 0.00 2.24
5035 12388 5.744666 TGACTAACTTTGCCACAACTAAC 57.255 39.130 0.00 0.00 0.00 2.34
5036 12389 4.577283 TGACTAACTTTGCCACAACTAACC 59.423 41.667 0.00 0.00 0.00 2.85
5037 12390 4.788679 ACTAACTTTGCCACAACTAACCT 58.211 39.130 0.00 0.00 0.00 3.50
5038 12391 5.198207 ACTAACTTTGCCACAACTAACCTT 58.802 37.500 0.00 0.00 0.00 3.50
5039 12392 6.358991 ACTAACTTTGCCACAACTAACCTTA 58.641 36.000 0.00 0.00 0.00 2.69
5040 12393 5.767816 AACTTTGCCACAACTAACCTTAG 57.232 39.130 0.00 0.00 36.82 2.18
5041 12394 4.142038 ACTTTGCCACAACTAACCTTAGG 58.858 43.478 0.00 0.00 35.08 2.69
5042 12395 2.194201 TGCCACAACTAACCTTAGGC 57.806 50.000 0.00 0.00 40.93 3.93
5043 12396 2.194201 GCCACAACTAACCTTAGGCA 57.806 50.000 0.00 0.00 40.29 4.75
5044 12397 2.158593 TGCCACAACTAACCTTAGGCAA 60.159 45.455 0.00 0.00 46.55 4.52
5045 12398 2.888414 GCCACAACTAACCTTAGGCAAA 59.112 45.455 0.00 0.00 40.29 3.68
5046 12399 3.057526 GCCACAACTAACCTTAGGCAAAG 60.058 47.826 0.00 0.00 40.29 2.77
5047 12400 4.142038 CCACAACTAACCTTAGGCAAAGT 58.858 43.478 0.00 0.00 35.08 2.66
5048 12401 4.023193 CCACAACTAACCTTAGGCAAAGTG 60.023 45.833 0.00 0.35 35.08 3.16
5049 12402 4.578928 CACAACTAACCTTAGGCAAAGTGT 59.421 41.667 0.00 0.00 35.08 3.55
5050 12403 4.578928 ACAACTAACCTTAGGCAAAGTGTG 59.421 41.667 0.00 4.15 35.08 3.82
5051 12404 3.751518 ACTAACCTTAGGCAAAGTGTGG 58.248 45.455 0.00 0.00 35.08 4.17
5082 12435 5.687770 AAAAATGTGGCTAACAAAATGGC 57.312 34.783 0.00 0.00 43.61 4.40
5083 12436 3.333029 AATGTGGCTAACAAAATGGCC 57.667 42.857 0.00 0.00 43.61 5.36
5086 12439 3.832704 GGCTAACAAAATGGCCACC 57.167 52.632 8.16 0.00 43.59 4.61
5087 12440 0.972883 GGCTAACAAAATGGCCACCA 59.027 50.000 8.16 0.00 43.59 4.17
5088 12441 1.337728 GGCTAACAAAATGGCCACCAC 60.338 52.381 8.16 0.00 43.59 4.16
5089 12442 1.342819 GCTAACAAAATGGCCACCACA 59.657 47.619 8.16 0.00 35.80 4.17
5090 12443 2.224161 GCTAACAAAATGGCCACCACAA 60.224 45.455 8.16 0.00 35.80 3.33
5091 12444 2.618442 AACAAAATGGCCACCACAAG 57.382 45.000 8.16 0.00 35.80 3.16
5092 12445 1.494960 ACAAAATGGCCACCACAAGT 58.505 45.000 8.16 0.00 35.80 3.16
5093 12446 1.138661 ACAAAATGGCCACCACAAGTG 59.861 47.619 8.16 1.91 46.83 3.16
5094 12447 1.138661 CAAAATGGCCACCACAAGTGT 59.861 47.619 8.16 0.00 45.74 3.55
5095 12448 0.752054 AAATGGCCACCACAAGTGTG 59.248 50.000 8.16 4.38 45.74 3.82
5106 12459 2.746269 CACAAGTGTGGCAAGATTTGG 58.254 47.619 3.39 0.00 42.10 3.28
5119 12472 1.926561 GATTTGGCCAAAATCGAGCC 58.073 50.000 33.43 13.21 43.52 4.70
5124 12477 1.967319 GGCCAAAATCGAGCCTATGA 58.033 50.000 0.00 0.00 43.62 2.15
5125 12478 1.604278 GGCCAAAATCGAGCCTATGAC 59.396 52.381 0.00 0.00 43.62 3.06
5126 12479 2.288666 GCCAAAATCGAGCCTATGACA 58.711 47.619 0.00 0.00 0.00 3.58
5127 12480 2.880890 GCCAAAATCGAGCCTATGACAT 59.119 45.455 0.00 0.00 0.00 3.06
5128 12481 3.304257 GCCAAAATCGAGCCTATGACATG 60.304 47.826 0.00 0.00 0.00 3.21
5129 12482 3.879295 CCAAAATCGAGCCTATGACATGT 59.121 43.478 0.00 0.00 0.00 3.21
5130 12483 4.260907 CCAAAATCGAGCCTATGACATGTG 60.261 45.833 1.15 0.00 0.00 3.21
5131 12484 2.827800 ATCGAGCCTATGACATGTGG 57.172 50.000 1.15 0.00 0.00 4.17
5132 12485 1.775385 TCGAGCCTATGACATGTGGA 58.225 50.000 1.15 0.00 0.00 4.02
5133 12486 1.409064 TCGAGCCTATGACATGTGGAC 59.591 52.381 1.15 0.00 0.00 4.02
5134 12487 1.539065 CGAGCCTATGACATGTGGACC 60.539 57.143 1.15 0.00 0.00 4.46
5135 12488 1.486310 GAGCCTATGACATGTGGACCA 59.514 52.381 1.15 0.00 0.00 4.02
5136 12489 2.105477 GAGCCTATGACATGTGGACCAT 59.895 50.000 1.15 2.70 0.00 3.55
5137 12490 3.317406 AGCCTATGACATGTGGACCATA 58.683 45.455 1.15 3.88 30.71 2.74
5138 12491 3.912528 AGCCTATGACATGTGGACCATAT 59.087 43.478 1.15 0.00 30.71 1.78
5139 12492 5.093677 AGCCTATGACATGTGGACCATATA 58.906 41.667 1.15 0.00 30.71 0.86
5140 12493 5.547666 AGCCTATGACATGTGGACCATATAA 59.452 40.000 1.15 0.00 30.71 0.98
5141 12494 5.643777 GCCTATGACATGTGGACCATATAAC 59.356 44.000 1.15 2.21 30.71 1.89
5142 12495 6.520742 GCCTATGACATGTGGACCATATAACT 60.521 42.308 1.15 0.00 30.71 2.24
5143 12496 7.310423 GCCTATGACATGTGGACCATATAACTA 60.310 40.741 1.15 0.00 30.71 2.24
5144 12497 8.253810 CCTATGACATGTGGACCATATAACTAG 58.746 40.741 1.15 3.63 30.71 2.57
5145 12498 7.855784 ATGACATGTGGACCATATAACTAGA 57.144 36.000 1.15 0.00 30.71 2.43
5146 12499 7.669089 TGACATGTGGACCATATAACTAGAA 57.331 36.000 1.15 0.00 30.71 2.10
5147 12500 8.084985 TGACATGTGGACCATATAACTAGAAA 57.915 34.615 1.15 0.00 30.71 2.52
5148 12501 8.544622 TGACATGTGGACCATATAACTAGAAAA 58.455 33.333 1.15 0.00 30.71 2.29
5149 12502 9.391006 GACATGTGGACCATATAACTAGAAAAA 57.609 33.333 1.15 0.00 30.71 1.94
5150 12503 9.920946 ACATGTGGACCATATAACTAGAAAAAT 57.079 29.630 3.03 0.00 30.71 1.82
5163 12516 7.759489 AACTAGAAAAATATGGCAAGTCACA 57.241 32.000 0.00 0.00 0.00 3.58
5164 12517 7.759489 ACTAGAAAAATATGGCAAGTCACAA 57.241 32.000 0.00 0.00 0.00 3.33
5165 12518 7.820648 ACTAGAAAAATATGGCAAGTCACAAG 58.179 34.615 0.00 0.00 0.00 3.16
5166 12519 6.655078 AGAAAAATATGGCAAGTCACAAGT 57.345 33.333 0.00 0.00 0.00 3.16
5167 12520 6.449698 AGAAAAATATGGCAAGTCACAAGTG 58.550 36.000 0.00 0.00 0.00 3.16
5168 12521 5.789643 AAAATATGGCAAGTCACAAGTGT 57.210 34.783 0.00 0.00 0.00 3.55
5169 12522 4.771590 AATATGGCAAGTCACAAGTGTG 57.228 40.909 5.02 5.02 46.91 3.82
5184 12537 5.777802 ACAAGTGTGACAATGAACAAAACA 58.222 33.333 6.63 0.00 0.00 2.83
5185 12538 5.633182 ACAAGTGTGACAATGAACAAAACAC 59.367 36.000 6.63 0.00 37.34 3.32
5186 12539 5.643379 AGTGTGACAATGAACAAAACACT 57.357 34.783 0.00 0.00 41.31 3.55
5187 12540 6.024552 AGTGTGACAATGAACAAAACACTT 57.975 33.333 0.00 0.00 42.98 3.16
5188 12541 5.863397 AGTGTGACAATGAACAAAACACTTG 59.137 36.000 0.00 0.00 42.98 3.16
5189 12542 5.062058 GTGTGACAATGAACAAAACACTTGG 59.938 40.000 0.00 0.00 34.91 3.61
5190 12543 4.032786 GTGACAATGAACAAAACACTTGGC 59.967 41.667 0.00 0.00 0.00 4.52
5191 12544 4.081752 TGACAATGAACAAAACACTTGGCT 60.082 37.500 0.00 0.00 0.00 4.75
5192 12545 5.126222 TGACAATGAACAAAACACTTGGCTA 59.874 36.000 0.00 0.00 0.00 3.93
5193 12546 5.971763 ACAATGAACAAAACACTTGGCTAA 58.028 33.333 0.00 0.00 0.00 3.09
5194 12547 6.042143 ACAATGAACAAAACACTTGGCTAAG 58.958 36.000 8.47 8.47 39.86 2.18
5195 12548 6.127479 ACAATGAACAAAACACTTGGCTAAGA 60.127 34.615 17.63 0.00 37.36 2.10
5196 12549 6.655078 ATGAACAAAACACTTGGCTAAGAT 57.345 33.333 17.63 1.01 37.36 2.40
5197 12550 5.830912 TGAACAAAACACTTGGCTAAGATG 58.169 37.500 17.63 12.83 37.36 2.90
5198 12551 5.359576 TGAACAAAACACTTGGCTAAGATGT 59.640 36.000 17.63 13.44 37.36 3.06
5199 12552 5.438761 ACAAAACACTTGGCTAAGATGTC 57.561 39.130 17.63 0.00 37.36 3.06
5200 12553 4.024048 ACAAAACACTTGGCTAAGATGTCG 60.024 41.667 17.63 10.84 37.36 4.35
5201 12554 3.402628 AACACTTGGCTAAGATGTCGT 57.597 42.857 17.63 2.71 37.36 4.34
5202 12555 2.688507 ACACTTGGCTAAGATGTCGTG 58.311 47.619 17.63 6.45 37.36 4.35
5203 12556 2.002586 CACTTGGCTAAGATGTCGTGG 58.997 52.381 17.63 0.00 37.36 4.94
5204 12557 1.009829 CTTGGCTAAGATGTCGTGGC 58.990 55.000 3.24 0.00 35.92 5.01
5205 12558 0.323302 TTGGCTAAGATGTCGTGGCA 59.677 50.000 6.62 0.00 33.93 4.92
5206 12559 0.541392 TGGCTAAGATGTCGTGGCAT 59.459 50.000 6.62 0.00 33.93 4.40
5207 12560 0.940126 GGCTAAGATGTCGTGGCATG 59.060 55.000 0.00 0.00 33.93 4.06
5208 12561 1.473257 GGCTAAGATGTCGTGGCATGA 60.473 52.381 5.03 5.03 33.93 3.07
5209 12562 1.594862 GCTAAGATGTCGTGGCATGAC 59.405 52.381 28.64 28.64 34.78 3.06
5210 12563 2.739932 GCTAAGATGTCGTGGCATGACT 60.740 50.000 32.96 21.62 35.24 3.41
5211 12564 3.490933 GCTAAGATGTCGTGGCATGACTA 60.491 47.826 32.96 22.34 35.24 2.59
5212 12565 3.610040 AAGATGTCGTGGCATGACTAA 57.390 42.857 32.96 19.17 35.24 2.24
5213 12566 3.170791 AGATGTCGTGGCATGACTAAG 57.829 47.619 32.96 2.77 35.24 2.18
5214 12567 2.760650 AGATGTCGTGGCATGACTAAGA 59.239 45.455 32.96 18.20 35.24 2.10
5215 12568 3.386078 AGATGTCGTGGCATGACTAAGAT 59.614 43.478 32.96 21.54 35.24 2.40
5216 12569 3.610040 TGTCGTGGCATGACTAAGATT 57.390 42.857 32.96 0.00 35.24 2.40
5217 12570 4.729227 TGTCGTGGCATGACTAAGATTA 57.271 40.909 32.96 14.10 35.24 1.75
5218 12571 5.276461 TGTCGTGGCATGACTAAGATTAT 57.724 39.130 32.96 0.00 35.24 1.28
5219 12572 6.399639 TGTCGTGGCATGACTAAGATTATA 57.600 37.500 32.96 12.79 35.24 0.98
5220 12573 6.213677 TGTCGTGGCATGACTAAGATTATAC 58.786 40.000 32.96 9.96 35.24 1.47
5221 12574 5.342525 GTCGTGGCATGACTAAGATTATACG 59.657 44.000 28.20 4.74 31.58 3.06
5222 12575 5.009310 TCGTGGCATGACTAAGATTATACGT 59.991 40.000 5.03 0.00 0.00 3.57
5223 12576 5.117135 CGTGGCATGACTAAGATTATACGTG 59.883 44.000 0.00 0.00 0.00 4.49
5224 12577 5.405571 GTGGCATGACTAAGATTATACGTGG 59.594 44.000 0.00 0.00 0.00 4.94
5225 12578 4.389077 GGCATGACTAAGATTATACGTGGC 59.611 45.833 0.00 0.00 34.07 5.01
5226 12579 4.988540 GCATGACTAAGATTATACGTGGCA 59.011 41.667 0.00 0.00 0.00 4.92
5227 12580 5.465390 GCATGACTAAGATTATACGTGGCAA 59.535 40.000 0.00 0.00 0.00 4.52
5228 12581 6.147821 GCATGACTAAGATTATACGTGGCAAT 59.852 38.462 0.00 0.00 0.00 3.56
5229 12582 7.513132 CATGACTAAGATTATACGTGGCAATG 58.487 38.462 0.00 0.00 0.00 2.82
5230 12583 6.578944 TGACTAAGATTATACGTGGCAATGT 58.421 36.000 0.00 0.00 0.00 2.71
5231 12584 7.045416 TGACTAAGATTATACGTGGCAATGTT 58.955 34.615 0.00 2.51 0.00 2.71
5232 12585 8.198778 TGACTAAGATTATACGTGGCAATGTTA 58.801 33.333 0.00 3.55 0.00 2.41
5233 12586 8.589335 ACTAAGATTATACGTGGCAATGTTAG 57.411 34.615 21.09 21.09 39.54 2.34
5234 12587 6.861065 AAGATTATACGTGGCAATGTTAGG 57.139 37.500 0.00 0.00 0.00 2.69
5235 12588 4.755123 AGATTATACGTGGCAATGTTAGGC 59.245 41.667 0.00 0.00 0.00 3.93
5236 12589 2.710096 ATACGTGGCAATGTTAGGCT 57.290 45.000 0.00 0.00 0.00 4.58
5237 12590 1.732941 TACGTGGCAATGTTAGGCTG 58.267 50.000 0.00 0.00 0.00 4.85
5238 12591 0.960364 ACGTGGCAATGTTAGGCTGG 60.960 55.000 0.00 0.00 0.00 4.85
5239 12592 1.656818 CGTGGCAATGTTAGGCTGGG 61.657 60.000 0.00 0.00 0.00 4.45
5240 12593 0.323360 GTGGCAATGTTAGGCTGGGA 60.323 55.000 0.00 0.00 0.00 4.37
5241 12594 0.407528 TGGCAATGTTAGGCTGGGAA 59.592 50.000 0.00 0.00 0.00 3.97
5242 12595 0.817654 GGCAATGTTAGGCTGGGAAC 59.182 55.000 0.00 0.00 0.00 3.62
5258 12611 3.503800 GGAACCAAACAGACCCTTAGT 57.496 47.619 0.00 0.00 0.00 2.24
5259 12612 3.828921 GGAACCAAACAGACCCTTAGTT 58.171 45.455 0.00 0.00 0.00 2.24
5260 12613 4.976864 GGAACCAAACAGACCCTTAGTTA 58.023 43.478 0.00 0.00 0.00 2.24
5261 12614 5.567430 GGAACCAAACAGACCCTTAGTTAT 58.433 41.667 0.00 0.00 0.00 1.89
5262 12615 5.646793 GGAACCAAACAGACCCTTAGTTATC 59.353 44.000 0.00 0.00 0.00 1.75
5263 12616 6.449830 AACCAAACAGACCCTTAGTTATCT 57.550 37.500 0.00 0.00 0.00 1.98
5264 12617 6.449830 ACCAAACAGACCCTTAGTTATCTT 57.550 37.500 0.00 0.00 0.00 2.40
5265 12618 7.563724 ACCAAACAGACCCTTAGTTATCTTA 57.436 36.000 0.00 0.00 0.00 2.10
5266 12619 7.621796 ACCAAACAGACCCTTAGTTATCTTAG 58.378 38.462 0.00 0.00 0.00 2.18
5267 12620 7.048512 CCAAACAGACCCTTAGTTATCTTAGG 58.951 42.308 0.00 0.00 39.41 2.69
5268 12621 7.093024 CCAAACAGACCCTTAGTTATCTTAGGA 60.093 40.741 7.32 0.00 41.45 2.94
5269 12622 8.487028 CAAACAGACCCTTAGTTATCTTAGGAT 58.513 37.037 7.32 0.00 41.45 3.24
5270 12623 8.625467 AACAGACCCTTAGTTATCTTAGGATT 57.375 34.615 7.32 0.00 41.45 3.01
5271 12624 8.252624 ACAGACCCTTAGTTATCTTAGGATTC 57.747 38.462 7.32 4.19 41.45 2.52
5272 12625 8.068733 ACAGACCCTTAGTTATCTTAGGATTCT 58.931 37.037 7.32 6.00 41.45 2.40
5273 12626 8.364142 CAGACCCTTAGTTATCTTAGGATTCTG 58.636 40.741 15.65 15.65 41.45 3.02
5274 12627 8.068733 AGACCCTTAGTTATCTTAGGATTCTGT 58.931 37.037 7.32 0.00 41.45 3.41
5275 12628 8.625467 ACCCTTAGTTATCTTAGGATTCTGTT 57.375 34.615 7.32 0.00 41.45 3.16
5276 12629 9.725206 ACCCTTAGTTATCTTAGGATTCTGTTA 57.275 33.333 7.32 0.00 41.45 2.41
5306 12659 7.987750 TTTTAACACAGTACATATGCAAGGA 57.012 32.000 1.58 0.00 0.00 3.36
5307 12660 8.574251 TTTTAACACAGTACATATGCAAGGAT 57.426 30.769 1.58 0.00 0.00 3.24
5308 12661 8.574251 TTTAACACAGTACATATGCAAGGATT 57.426 30.769 1.58 0.00 0.00 3.01
5309 12662 6.683974 AACACAGTACATATGCAAGGATTC 57.316 37.500 1.58 0.00 0.00 2.52
5310 12663 5.994250 ACACAGTACATATGCAAGGATTCT 58.006 37.500 1.58 0.00 0.00 2.40
5311 12664 6.051717 ACACAGTACATATGCAAGGATTCTC 58.948 40.000 1.58 0.00 0.00 2.87
5312 12665 6.126940 ACACAGTACATATGCAAGGATTCTCT 60.127 38.462 1.58 0.00 0.00 3.10
5313 12666 6.765036 CACAGTACATATGCAAGGATTCTCTT 59.235 38.462 1.58 0.00 0.00 2.85
5314 12667 7.928167 CACAGTACATATGCAAGGATTCTCTTA 59.072 37.037 1.58 0.00 0.00 2.10
5315 12668 8.147058 ACAGTACATATGCAAGGATTCTCTTAG 58.853 37.037 1.58 0.00 0.00 2.18
5316 12669 7.117523 CAGTACATATGCAAGGATTCTCTTAGC 59.882 40.741 1.58 0.00 0.00 3.09
5317 12670 6.185114 ACATATGCAAGGATTCTCTTAGCT 57.815 37.500 1.58 0.00 0.00 3.32
5318 12671 5.996513 ACATATGCAAGGATTCTCTTAGCTG 59.003 40.000 1.58 0.00 0.00 4.24
5319 12672 4.767578 ATGCAAGGATTCTCTTAGCTGA 57.232 40.909 0.00 0.00 0.00 4.26
5320 12673 3.866651 TGCAAGGATTCTCTTAGCTGAC 58.133 45.455 0.00 0.00 0.00 3.51
5321 12674 3.517100 TGCAAGGATTCTCTTAGCTGACT 59.483 43.478 0.00 0.00 0.00 3.41
5322 12675 4.119136 GCAAGGATTCTCTTAGCTGACTC 58.881 47.826 0.00 0.00 0.00 3.36
5323 12676 4.358851 CAAGGATTCTCTTAGCTGACTCG 58.641 47.826 0.00 0.00 0.00 4.18
5324 12677 3.626930 AGGATTCTCTTAGCTGACTCGT 58.373 45.455 0.00 0.00 0.00 4.18
5325 12678 4.783055 AGGATTCTCTTAGCTGACTCGTA 58.217 43.478 0.00 0.00 0.00 3.43
5326 12679 4.577283 AGGATTCTCTTAGCTGACTCGTAC 59.423 45.833 0.00 0.00 0.00 3.67
5327 12680 4.335874 GGATTCTCTTAGCTGACTCGTACA 59.664 45.833 0.00 0.00 0.00 2.90
5328 12681 4.948608 TTCTCTTAGCTGACTCGTACAG 57.051 45.455 0.00 0.00 38.27 2.74
5329 12682 3.271729 TCTCTTAGCTGACTCGTACAGG 58.728 50.000 0.00 0.00 36.09 4.00
5330 12683 3.011119 CTCTTAGCTGACTCGTACAGGT 58.989 50.000 0.00 12.99 45.76 4.00
5331 12684 2.747989 TCTTAGCTGACTCGTACAGGTG 59.252 50.000 16.15 5.77 44.10 4.00
5332 12685 0.809385 TAGCTGACTCGTACAGGTGC 59.191 55.000 16.15 0.00 44.10 5.01
5333 12686 1.446272 GCTGACTCGTACAGGTGCC 60.446 63.158 0.00 0.00 36.09 5.01
5334 12687 1.154016 CTGACTCGTACAGGTGCCG 60.154 63.158 0.00 0.00 0.00 5.69
5335 12688 2.506438 GACTCGTACAGGTGCCGC 60.506 66.667 0.00 0.00 0.00 6.53
5336 12689 3.277211 GACTCGTACAGGTGCCGCA 62.277 63.158 0.00 0.00 0.00 5.69
5337 12690 2.048597 CTCGTACAGGTGCCGCAA 60.049 61.111 0.00 0.00 0.00 4.85
5338 12691 2.048597 TCGTACAGGTGCCGCAAG 60.049 61.111 0.00 0.00 0.00 4.01
5339 12692 3.788766 CGTACAGGTGCCGCAAGC 61.789 66.667 0.00 0.00 44.14 4.01
5340 12693 3.431725 GTACAGGTGCCGCAAGCC 61.432 66.667 0.00 0.00 42.71 4.35
5341 12694 4.715523 TACAGGTGCCGCAAGCCC 62.716 66.667 0.00 0.00 42.71 5.19
5351 12704 3.358707 GCAAGCCCCGCAACGTTA 61.359 61.111 0.00 0.00 0.00 3.18
5352 12705 2.910345 GCAAGCCCCGCAACGTTAA 61.910 57.895 0.00 0.00 0.00 2.01
5353 12706 1.081708 CAAGCCCCGCAACGTTAAC 60.082 57.895 0.00 0.00 0.00 2.01
5354 12707 2.609759 AAGCCCCGCAACGTTAACG 61.610 57.895 25.68 25.68 46.33 3.18
5355 12708 4.746951 GCCCCGCAACGTTAACGC 62.747 66.667 27.07 10.69 44.43 4.84
5356 12709 4.092652 CCCCGCAACGTTAACGCC 62.093 66.667 27.07 14.64 44.43 5.68
5357 12710 4.433431 CCCGCAACGTTAACGCCG 62.433 66.667 27.07 23.87 44.43 6.46
5378 12731 2.418334 GGTAGATCGTCAAGGTGAACCC 60.418 54.545 0.00 0.00 36.42 4.11
5379 12732 0.246635 AGATCGTCAAGGTGAACCCG 59.753 55.000 0.00 0.00 38.74 5.28
5383 12736 1.683441 GTCAAGGTGAACCCGGGAT 59.317 57.895 32.02 18.14 38.74 3.85
5393 12746 1.936767 AACCCGGGATGCATGATGGT 61.937 55.000 32.02 2.10 0.00 3.55
5401 12756 1.952296 GATGCATGATGGTCCTTGGTC 59.048 52.381 2.46 0.00 0.00 4.02
5419 12774 4.724399 TGGTCTCTTGTCATTTTTAGCCA 58.276 39.130 0.00 0.00 0.00 4.75
5463 12818 3.125316 GGCACAAACTTGATCTTACTCCG 59.875 47.826 0.00 0.00 0.00 4.63
5516 12873 3.935828 GGAGTAGATGAGTTGGAACTTGC 59.064 47.826 0.00 0.00 39.88 4.01
5517 12874 4.323104 GGAGTAGATGAGTTGGAACTTGCT 60.323 45.833 0.00 0.00 39.88 3.91
5518 12875 4.573900 AGTAGATGAGTTGGAACTTGCTG 58.426 43.478 0.00 0.00 39.88 4.41
5576 12933 3.199764 GGTACGTACCGTGCTGTTT 57.800 52.632 28.00 0.00 41.78 2.83
5631 13004 3.003171 CGGCAAACCTTTTCATTTTTGGG 59.997 43.478 0.00 0.00 30.98 4.12
5635 13008 6.183360 GGCAAACCTTTTCATTTTTGGGAAAT 60.183 34.615 0.00 0.00 33.43 2.17
5643 13016 4.133078 TCATTTTTGGGAAATGTGTTGGC 58.867 39.130 10.28 0.00 38.44 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.072177 TGCATCAAATAGTAAGTAGTGCAAC 57.928 36.000 0.00 0.00 37.16 4.17
7 8 7.864108 ATGCATCAAATAGTAAGTAGTGCAA 57.136 32.000 0.00 0.00 42.43 4.08
8 9 7.864108 AATGCATCAAATAGTAAGTAGTGCA 57.136 32.000 0.00 0.00 43.17 4.57
14 15 9.956720 GCATCTAAAATGCATCAAATAGTAAGT 57.043 29.630 0.00 0.00 44.00 2.24
164 165 2.289002 GGATCCATGTCATCGCTGAAAC 59.711 50.000 6.95 0.00 31.85 2.78
222 223 8.940768 AGATAGTATCAGCAGTTTTCTTCTTC 57.059 34.615 12.66 0.00 0.00 2.87
267 268 0.924090 GGATGAACTCGTCGATGTGC 59.076 55.000 4.21 0.00 32.78 4.57
276 277 0.178767 TGGAGGCATGGATGAACTCG 59.821 55.000 0.00 0.00 35.51 4.18
354 355 8.349983 GCAGGATGACTTAAAGTTTCAAGTTTA 58.650 33.333 0.00 0.00 39.69 2.01
358 359 5.703876 GGCAGGATGACTTAAAGTTTCAAG 58.296 41.667 0.00 0.00 44.72 3.02
392 393 5.009010 CCAGTGGCTTGATTATGAACATACC 59.991 44.000 0.00 0.00 0.00 2.73
470 556 2.044123 GCAATAAGCAGCCACTAGGT 57.956 50.000 0.00 0.00 44.79 3.08
563 652 9.007901 GGCTCGAAACCTTAGACTATAGTATAA 57.992 37.037 16.89 16.89 31.77 0.98
583 672 1.271840 ATAAACCTGCCAGGGCTCGA 61.272 55.000 16.70 0.00 40.58 4.04
587 676 3.790089 ATACTATAAACCTGCCAGGGC 57.210 47.619 16.70 2.62 40.58 5.19
588 677 6.154706 CCTACTATACTATAAACCTGCCAGGG 59.845 46.154 16.70 0.00 40.58 4.45
589 678 6.952358 TCCTACTATACTATAAACCTGCCAGG 59.048 42.308 9.83 9.83 42.49 4.45
590 679 8.596781 ATCCTACTATACTATAAACCTGCCAG 57.403 38.462 0.00 0.00 0.00 4.85
591 680 8.174757 TGATCCTACTATACTATAAACCTGCCA 58.825 37.037 0.00 0.00 0.00 4.92
592 681 8.591114 TGATCCTACTATACTATAAACCTGCC 57.409 38.462 0.00 0.00 0.00 4.85
602 691 8.594550 GGCTTTTCCATTGATCCTACTATACTA 58.405 37.037 0.00 0.00 34.01 1.82
603 692 7.293535 AGGCTTTTCCATTGATCCTACTATACT 59.706 37.037 0.00 0.00 37.29 2.12
604 693 7.454225 AGGCTTTTCCATTGATCCTACTATAC 58.546 38.462 0.00 0.00 37.29 1.47
605 694 7.514127 AGAGGCTTTTCCATTGATCCTACTATA 59.486 37.037 0.00 0.00 37.29 1.31
606 695 6.331307 AGAGGCTTTTCCATTGATCCTACTAT 59.669 38.462 0.00 0.00 37.29 2.12
607 696 5.667626 AGAGGCTTTTCCATTGATCCTACTA 59.332 40.000 0.00 0.00 37.29 1.82
608 697 4.476479 AGAGGCTTTTCCATTGATCCTACT 59.524 41.667 0.00 0.00 37.29 2.57
609 698 4.786425 AGAGGCTTTTCCATTGATCCTAC 58.214 43.478 0.00 0.00 37.29 3.18
612 701 2.615912 CGAGAGGCTTTTCCATTGATCC 59.384 50.000 0.00 0.00 37.29 3.36
663 752 5.011738 TGGGTTTAGAACACAAGTCTAGAGG 59.988 44.000 0.00 0.00 42.95 3.69
688 777 6.319405 TGGAAATATCACATCAAGTCACCATG 59.681 38.462 0.00 0.00 0.00 3.66
689 778 6.319658 GTGGAAATATCACATCAAGTCACCAT 59.680 38.462 0.00 0.00 35.39 3.55
707 797 7.822334 TCTCACGTGATTTATAGTTGTGGAAAT 59.178 33.333 20.40 0.00 0.00 2.17
712 802 8.584600 GTTAGTCTCACGTGATTTATAGTTGTG 58.415 37.037 20.40 2.54 0.00 3.33
731 821 8.883731 CATTGTCAAAGATATTTCCGTTAGTCT 58.116 33.333 0.00 0.00 0.00 3.24
747 837 9.897744 TTTAGTTTTCTATCAGCATTGTCAAAG 57.102 29.630 0.00 0.00 31.96 2.77
788 878 5.297776 CGGTTCATAGCATCTCCTCATTTTT 59.702 40.000 0.00 0.00 0.00 1.94
789 879 4.818546 CGGTTCATAGCATCTCCTCATTTT 59.181 41.667 0.00 0.00 0.00 1.82
790 880 4.141620 ACGGTTCATAGCATCTCCTCATTT 60.142 41.667 0.00 0.00 0.00 2.32
791 881 3.389329 ACGGTTCATAGCATCTCCTCATT 59.611 43.478 0.00 0.00 0.00 2.57
792 882 2.968574 ACGGTTCATAGCATCTCCTCAT 59.031 45.455 0.00 0.00 0.00 2.90
793 883 2.362397 GACGGTTCATAGCATCTCCTCA 59.638 50.000 0.00 0.00 0.00 3.86
794 884 2.625790 AGACGGTTCATAGCATCTCCTC 59.374 50.000 0.00 0.00 0.00 3.71
795 885 2.672098 AGACGGTTCATAGCATCTCCT 58.328 47.619 0.00 0.00 0.00 3.69
796 886 3.460857 AAGACGGTTCATAGCATCTCC 57.539 47.619 0.00 0.00 0.00 3.71
797 887 6.273825 TCTAAAAGACGGTTCATAGCATCTC 58.726 40.000 0.00 0.00 0.00 2.75
798 888 6.127310 ACTCTAAAAGACGGTTCATAGCATCT 60.127 38.462 0.00 0.00 0.00 2.90
799 889 6.043411 ACTCTAAAAGACGGTTCATAGCATC 58.957 40.000 0.00 0.00 0.00 3.91
800 890 5.978814 ACTCTAAAAGACGGTTCATAGCAT 58.021 37.500 0.00 0.00 0.00 3.79
801 891 5.401531 ACTCTAAAAGACGGTTCATAGCA 57.598 39.130 0.00 0.00 0.00 3.49
827 917 9.535878 TGGGAAATAATGTCAAAGTTTAAACAC 57.464 29.630 20.06 9.89 0.00 3.32
829 919 9.758651 AGTGGGAAATAATGTCAAAGTTTAAAC 57.241 29.630 10.47 10.47 0.00 2.01
858 949 7.785033 AGGGCAAATGATCGAAAAATAAAGAT 58.215 30.769 0.00 0.00 0.00 2.40
859 950 7.169158 AGGGCAAATGATCGAAAAATAAAGA 57.831 32.000 0.00 0.00 0.00 2.52
863 954 7.639113 ACTTAGGGCAAATGATCGAAAAATA 57.361 32.000 0.00 0.00 0.00 1.40
925 1016 1.961394 GGGCCATCTCACGTACTGATA 59.039 52.381 4.39 0.00 0.00 2.15
960 1072 9.777575 GAAGATTTGGGATAAATTGCAAAATTG 57.222 29.630 1.71 0.00 0.00 2.32
1002 1114 1.832411 CGATCGATCTGCTCCGTCGA 61.832 60.000 22.43 0.00 46.75 4.20
1004 1116 0.519519 ATCGATCGATCTGCTCCGTC 59.480 55.000 24.60 0.00 0.00 4.79
1091 1213 1.250840 GCTGATGGTGGTGGGGTTTC 61.251 60.000 0.00 0.00 0.00 2.78
1386 1514 4.545706 TCATCCCATGCCGCGACC 62.546 66.667 8.23 0.00 0.00 4.79
1428 1573 6.796705 AGTACGGAGGAAAACAAAATGTAG 57.203 37.500 0.00 0.00 0.00 2.74
1535 1693 7.761038 ACTTTTCTTAGGGACAAATACCTTG 57.239 36.000 0.00 0.00 34.11 3.61
1671 2248 3.093814 TGAGCAGCAATTGTGATCCAAT 58.906 40.909 17.59 4.21 45.81 3.16
1794 2372 1.768275 ACACGATCCATCTTGCCCATA 59.232 47.619 0.00 0.00 30.00 2.74
1800 2378 2.094026 TCTCCACACACGATCCATCTTG 60.094 50.000 0.00 0.00 32.87 3.02
1911 2489 7.477494 CATGACAGATTATCAGATGCAAAACA 58.523 34.615 0.00 0.00 0.00 2.83
2022 2600 6.841229 AGACAGGATGGTCTAAATATCTCACA 59.159 38.462 0.00 0.00 45.95 3.58
2026 2604 9.781425 ATATCAGACAGGATGGTCTAAATATCT 57.219 33.333 0.00 0.00 46.05 1.98
2047 2625 5.402997 TGCTTGGTTTTTGCATCATATCA 57.597 34.783 0.00 0.00 0.00 2.15
2138 2717 7.795047 ACAATATGTGAGATTACTGGTCATCA 58.205 34.615 0.00 0.00 0.00 3.07
2176 2756 9.825109 AAGCCAAAACTTAGTTTGCTAATTTTA 57.175 25.926 18.59 0.00 38.36 1.52
2250 2831 9.520204 GCAGATACAAAATAATGCTGTAATGTT 57.480 29.630 0.00 0.00 0.00 2.71
2728 3678 6.156602 TGACCAAAGCCCATTGATATGAATTT 59.843 34.615 0.00 0.00 33.37 1.82
2729 3679 5.662208 TGACCAAAGCCCATTGATATGAATT 59.338 36.000 0.00 0.00 33.37 2.17
3293 7888 8.637196 TGAACACACCACCAATTGTAATAATA 57.363 30.769 4.43 0.00 0.00 0.98
3295 7890 6.015856 CCTGAACACACCACCAATTGTAATAA 60.016 38.462 4.43 0.00 0.00 1.40
3537 8261 3.584848 AGCTATTAACTGATAGGGCCTGG 59.415 47.826 18.53 6.21 31.62 4.45
3832 8577 3.791973 AAACAAACGCTGTCAATTCCA 57.208 38.095 0.00 0.00 37.23 3.53
3946 8691 0.540597 AAGGGCTTGCTTGAGTTCCC 60.541 55.000 0.00 0.00 0.00 3.97
4243 8988 3.395639 CAGTACTTTCAGGTTAACCGCA 58.604 45.455 18.91 6.73 42.08 5.69
4249 8994 3.159472 TCTCGGCAGTACTTTCAGGTTA 58.841 45.455 0.00 0.00 0.00 2.85
4259 9004 2.674796 AGTTCCATTCTCGGCAGTAC 57.325 50.000 0.00 0.00 0.00 2.73
4306 9052 3.517296 TTTCCAGGATACAACTGCCAA 57.483 42.857 0.00 0.00 41.41 4.52
4369 9115 4.817517 ACGACAAAACGACTAGGATGAAT 58.182 39.130 0.00 0.00 37.03 2.57
4379 9125 1.645751 CTACGGCTACGACAAAACGAC 59.354 52.381 0.00 0.00 44.60 4.34
4381 9127 0.364515 GCTACGGCTACGACAAAACG 59.635 55.000 0.00 0.00 44.60 3.60
4437 9183 1.270041 CCCGGATCTGCTTCTTAGAGC 60.270 57.143 0.73 0.00 43.00 4.09
4444 9190 1.997928 GCTTTGCCCGGATCTGCTTC 61.998 60.000 0.73 0.00 0.00 3.86
4553 11903 6.798427 TCAGGATCTGAAACAAGTATAGCT 57.202 37.500 0.00 0.00 37.57 3.32
4638 11988 9.790344 TTACAACCATCAAATCAAATGGAAAAT 57.210 25.926 8.31 0.00 44.37 1.82
4652 12002 6.072397 ACGATTTTCCGATTTACAACCATCAA 60.072 34.615 0.00 0.00 0.00 2.57
4659 12009 7.473027 GGAGATACGATTTTCCGATTTACAA 57.527 36.000 0.00 0.00 0.00 2.41
4675 12025 5.065346 AGTCAGATATATGCACGGAGATACG 59.935 44.000 0.00 0.00 40.31 3.06
4698 12051 1.242076 CTTCCCCACAGAACTGCAAG 58.758 55.000 1.46 0.00 42.29 4.01
4699 12052 0.550914 ACTTCCCCACAGAACTGCAA 59.449 50.000 1.46 0.00 0.00 4.08
4700 12053 0.179020 CACTTCCCCACAGAACTGCA 60.179 55.000 1.46 0.00 0.00 4.41
4701 12054 1.518903 GCACTTCCCCACAGAACTGC 61.519 60.000 1.46 0.00 31.48 4.40
4702 12055 0.890996 GGCACTTCCCCACAGAACTG 60.891 60.000 0.00 0.00 0.00 3.16
4703 12056 1.352622 TGGCACTTCCCCACAGAACT 61.353 55.000 0.00 0.00 0.00 3.01
4704 12057 0.251341 ATGGCACTTCCCCACAGAAC 60.251 55.000 0.00 0.00 34.68 3.01
4705 12058 0.251297 CATGGCACTTCCCCACAGAA 60.251 55.000 0.00 0.00 34.68 3.02
4706 12059 1.379916 CATGGCACTTCCCCACAGA 59.620 57.895 0.00 0.00 34.68 3.41
4707 12060 1.075482 ACATGGCACTTCCCCACAG 59.925 57.895 0.00 0.00 34.68 3.66
4708 12061 1.228521 CACATGGCACTTCCCCACA 60.229 57.895 0.00 0.00 34.68 4.17
4709 12062 0.037590 TACACATGGCACTTCCCCAC 59.962 55.000 0.00 0.00 34.68 4.61
4710 12063 0.774276 TTACACATGGCACTTCCCCA 59.226 50.000 0.00 0.00 36.66 4.96
4711 12064 1.173913 GTTACACATGGCACTTCCCC 58.826 55.000 0.00 0.00 0.00 4.81
4712 12065 1.812571 CAGTTACACATGGCACTTCCC 59.187 52.381 0.00 0.00 0.00 3.97
4713 12066 2.504367 ACAGTTACACATGGCACTTCC 58.496 47.619 0.00 0.00 0.00 3.46
4714 12067 5.682943 TTTACAGTTACACATGGCACTTC 57.317 39.130 0.00 0.00 0.00 3.01
4715 12068 7.938140 ATATTTACAGTTACACATGGCACTT 57.062 32.000 0.00 0.00 0.00 3.16
4716 12069 7.226720 GCTATATTTACAGTTACACATGGCACT 59.773 37.037 0.00 0.00 0.00 4.40
4717 12070 7.226720 AGCTATATTTACAGTTACACATGGCAC 59.773 37.037 0.00 0.00 0.00 5.01
4718 12071 7.226523 CAGCTATATTTACAGTTACACATGGCA 59.773 37.037 0.00 0.00 0.00 4.92
4719 12072 7.441157 TCAGCTATATTTACAGTTACACATGGC 59.559 37.037 0.00 0.00 0.00 4.40
4720 12073 8.887036 TCAGCTATATTTACAGTTACACATGG 57.113 34.615 0.00 0.00 0.00 3.66
4734 12087 4.347876 GGGGGCCAATTTTCAGCTATATTT 59.652 41.667 4.39 0.00 0.00 1.40
4754 12107 9.057089 GTATCATCTAGTTTCTTAAATGTGGGG 57.943 37.037 0.00 0.00 0.00 4.96
4764 12117 7.989741 CCATGTCAAGGTATCATCTAGTTTCTT 59.010 37.037 0.00 0.00 0.00 2.52
4766 12119 6.708054 CCCATGTCAAGGTATCATCTAGTTTC 59.292 42.308 0.00 0.00 0.00 2.78
4767 12120 6.386927 TCCCATGTCAAGGTATCATCTAGTTT 59.613 38.462 0.00 0.00 0.00 2.66
4768 12121 5.905331 TCCCATGTCAAGGTATCATCTAGTT 59.095 40.000 0.00 0.00 0.00 2.24
4769 12122 5.467738 TCCCATGTCAAGGTATCATCTAGT 58.532 41.667 0.00 0.00 0.00 2.57
4787 12140 9.902684 TTTAAACATATTGCAATCAATTCCCAT 57.097 25.926 16.86 0.00 42.51 4.00
4788 12141 9.902684 ATTTAAACATATTGCAATCAATTCCCA 57.097 25.926 16.86 0.00 42.51 4.37
4841 12194 7.455641 TTCAGTTTTAGTTCTCAAACCAACA 57.544 32.000 6.14 0.00 35.92 3.33
4842 12195 8.751302 TTTTCAGTTTTAGTTCTCAAACCAAC 57.249 30.769 6.14 0.00 35.92 3.77
4895 12248 9.561069 ACTCAACAATTTCTGTTCTACTATGTT 57.439 29.630 0.00 0.00 45.50 2.71
4896 12249 9.209175 GACTCAACAATTTCTGTTCTACTATGT 57.791 33.333 0.00 0.00 45.50 2.29
4897 12250 9.429359 AGACTCAACAATTTCTGTTCTACTATG 57.571 33.333 0.00 0.00 45.50 2.23
4899 12252 9.832445 AAAGACTCAACAATTTCTGTTCTACTA 57.168 29.630 0.00 0.00 45.50 1.82
4901 12254 9.788960 AAAAAGACTCAACAATTTCTGTTCTAC 57.211 29.630 0.00 0.00 45.50 2.59
4903 12256 7.976175 GGAAAAAGACTCAACAATTTCTGTTCT 59.024 33.333 0.00 0.00 45.50 3.01
4904 12257 7.759433 TGGAAAAAGACTCAACAATTTCTGTTC 59.241 33.333 0.00 0.00 45.50 3.18
4906 12259 7.169158 TGGAAAAAGACTCAACAATTTCTGT 57.831 32.000 0.00 0.00 41.27 3.41
4907 12260 7.306983 GCATGGAAAAAGACTCAACAATTTCTG 60.307 37.037 0.00 0.00 0.00 3.02
4908 12261 6.703165 GCATGGAAAAAGACTCAACAATTTCT 59.297 34.615 0.00 0.00 0.00 2.52
4909 12262 6.479660 TGCATGGAAAAAGACTCAACAATTTC 59.520 34.615 0.00 0.00 0.00 2.17
4910 12263 6.347696 TGCATGGAAAAAGACTCAACAATTT 58.652 32.000 0.00 0.00 0.00 1.82
4911 12264 5.916318 TGCATGGAAAAAGACTCAACAATT 58.084 33.333 0.00 0.00 0.00 2.32
4912 12265 5.534207 TGCATGGAAAAAGACTCAACAAT 57.466 34.783 0.00 0.00 0.00 2.71
4913 12266 4.998671 TGCATGGAAAAAGACTCAACAA 57.001 36.364 0.00 0.00 0.00 2.83
4914 12267 4.873817 CATGCATGGAAAAAGACTCAACA 58.126 39.130 19.40 0.00 0.00 3.33
4933 12286 9.507329 AACTTATTACCTCAGCATATAACCATG 57.493 33.333 0.00 0.00 0.00 3.66
4940 12293 8.202137 ACGTGTAAACTTATTACCTCAGCATAT 58.798 33.333 0.00 0.00 0.00 1.78
4941 12294 7.490079 CACGTGTAAACTTATTACCTCAGCATA 59.510 37.037 7.58 0.00 0.00 3.14
4944 12297 5.865552 TCACGTGTAAACTTATTACCTCAGC 59.134 40.000 16.51 0.00 0.00 4.26
4945 12298 7.310664 TCTCACGTGTAAACTTATTACCTCAG 58.689 38.462 16.51 0.00 0.00 3.35
4947 12300 8.524870 TTTCTCACGTGTAAACTTATTACCTC 57.475 34.615 16.51 0.00 0.00 3.85
4957 12310 8.918658 TCACTAACATATTTCTCACGTGTAAAC 58.081 33.333 16.51 0.00 0.00 2.01
4958 12311 9.135843 CTCACTAACATATTTCTCACGTGTAAA 57.864 33.333 16.51 16.80 0.00 2.01
4960 12313 8.047413 TCTCACTAACATATTTCTCACGTGTA 57.953 34.615 16.51 2.02 0.00 2.90
4962 12315 7.702348 TGATCTCACTAACATATTTCTCACGTG 59.298 37.037 9.94 9.94 0.00 4.49
4981 12334 3.995636 AGGCCCTAAGTAAGTGATCTCA 58.004 45.455 0.00 0.00 0.00 3.27
4982 12335 6.673839 AATAGGCCCTAAGTAAGTGATCTC 57.326 41.667 0.00 0.00 0.00 2.75
4983 12336 6.183361 CCAAATAGGCCCTAAGTAAGTGATCT 60.183 42.308 0.00 0.00 0.00 2.75
4984 12337 5.998363 CCAAATAGGCCCTAAGTAAGTGATC 59.002 44.000 0.00 0.00 0.00 2.92
4986 12339 4.786454 ACCAAATAGGCCCTAAGTAAGTGA 59.214 41.667 0.00 0.00 43.14 3.41
4987 12340 5.112129 ACCAAATAGGCCCTAAGTAAGTG 57.888 43.478 0.00 0.00 43.14 3.16
4991 12344 7.128263 AGTCATAAACCAAATAGGCCCTAAGTA 59.872 37.037 0.00 0.00 43.14 2.24
4993 12346 6.365520 AGTCATAAACCAAATAGGCCCTAAG 58.634 40.000 0.00 0.00 43.14 2.18
4994 12347 6.335781 AGTCATAAACCAAATAGGCCCTAA 57.664 37.500 0.00 0.00 43.14 2.69
4995 12348 5.987019 AGTCATAAACCAAATAGGCCCTA 57.013 39.130 0.00 0.00 43.14 3.53
4996 12349 4.881157 AGTCATAAACCAAATAGGCCCT 57.119 40.909 0.00 0.00 43.14 5.19
4997 12350 6.127101 AGTTAGTCATAAACCAAATAGGCCC 58.873 40.000 0.00 0.00 43.14 5.80
4999 12352 7.488150 GCAAAGTTAGTCATAAACCAAATAGGC 59.512 37.037 0.00 0.00 43.14 3.93
5000 12353 7.973944 GGCAAAGTTAGTCATAAACCAAATAGG 59.026 37.037 0.00 0.00 45.67 2.57
5003 12356 7.151976 GTGGCAAAGTTAGTCATAAACCAAAT 58.848 34.615 0.00 0.00 0.00 2.32
5004 12357 6.096987 TGTGGCAAAGTTAGTCATAAACCAAA 59.903 34.615 0.00 0.00 0.00 3.28
5006 12359 5.133941 TGTGGCAAAGTTAGTCATAAACCA 58.866 37.500 0.00 0.00 0.00 3.67
5007 12360 5.699097 TGTGGCAAAGTTAGTCATAAACC 57.301 39.130 0.00 0.00 0.00 3.27
5010 12363 7.040961 GGTTAGTTGTGGCAAAGTTAGTCATAA 60.041 37.037 0.00 0.00 0.00 1.90
5011 12364 6.428771 GGTTAGTTGTGGCAAAGTTAGTCATA 59.571 38.462 0.00 0.00 0.00 2.15
5012 12365 5.240844 GGTTAGTTGTGGCAAAGTTAGTCAT 59.759 40.000 0.00 0.00 0.00 3.06
5013 12366 4.577283 GGTTAGTTGTGGCAAAGTTAGTCA 59.423 41.667 0.00 0.00 0.00 3.41
5015 12368 4.788679 AGGTTAGTTGTGGCAAAGTTAGT 58.211 39.130 0.00 0.00 0.00 2.24
5017 12370 5.766174 CCTAAGGTTAGTTGTGGCAAAGTTA 59.234 40.000 0.00 0.00 0.00 2.24
5018 12371 4.583073 CCTAAGGTTAGTTGTGGCAAAGTT 59.417 41.667 0.00 0.00 0.00 2.66
5019 12372 4.142038 CCTAAGGTTAGTTGTGGCAAAGT 58.858 43.478 0.00 0.00 0.00 2.66
5020 12373 3.057526 GCCTAAGGTTAGTTGTGGCAAAG 60.058 47.826 0.00 0.00 38.79 2.77
5021 12374 2.888414 GCCTAAGGTTAGTTGTGGCAAA 59.112 45.455 0.00 0.00 38.79 3.68
5023 12376 1.422024 TGCCTAAGGTTAGTTGTGGCA 59.578 47.619 0.00 0.00 45.31 4.92
5024 12377 2.194201 TGCCTAAGGTTAGTTGTGGC 57.806 50.000 0.00 0.00 39.33 5.01
5025 12378 4.023193 CACTTTGCCTAAGGTTAGTTGTGG 60.023 45.833 1.38 0.00 38.23 4.17
5026 12379 4.578928 ACACTTTGCCTAAGGTTAGTTGTG 59.421 41.667 0.00 0.00 38.23 3.33
5027 12380 4.578928 CACACTTTGCCTAAGGTTAGTTGT 59.421 41.667 1.38 0.00 38.23 3.32
5028 12381 4.023193 CCACACTTTGCCTAAGGTTAGTTG 60.023 45.833 1.38 0.00 38.23 3.16
5029 12382 4.142038 CCACACTTTGCCTAAGGTTAGTT 58.858 43.478 1.38 0.00 38.23 2.24
5030 12383 3.751518 CCACACTTTGCCTAAGGTTAGT 58.248 45.455 1.38 0.00 38.23 2.24
5031 12384 2.488153 GCCACACTTTGCCTAAGGTTAG 59.512 50.000 1.38 0.00 38.23 2.34
5032 12385 2.107552 AGCCACACTTTGCCTAAGGTTA 59.892 45.455 1.38 0.00 38.23 2.85
5033 12386 1.133482 AGCCACACTTTGCCTAAGGTT 60.133 47.619 1.38 0.00 38.23 3.50
5034 12387 0.478507 AGCCACACTTTGCCTAAGGT 59.521 50.000 1.38 0.00 38.23 3.50
5035 12388 0.883833 CAGCCACACTTTGCCTAAGG 59.116 55.000 1.38 0.00 38.23 2.69
5036 12389 1.537202 GACAGCCACACTTTGCCTAAG 59.463 52.381 0.00 0.00 39.87 2.18
5037 12390 1.133945 TGACAGCCACACTTTGCCTAA 60.134 47.619 0.00 0.00 0.00 2.69
5038 12391 0.472044 TGACAGCCACACTTTGCCTA 59.528 50.000 0.00 0.00 0.00 3.93
5039 12392 1.103398 GTGACAGCCACACTTTGCCT 61.103 55.000 0.00 0.00 45.03 4.75
5040 12393 1.360192 GTGACAGCCACACTTTGCC 59.640 57.895 0.00 0.00 45.03 4.52
5060 12413 4.518590 GGCCATTTTGTTAGCCACATTTTT 59.481 37.500 0.00 0.00 45.07 1.94
5061 12414 4.071423 GGCCATTTTGTTAGCCACATTTT 58.929 39.130 0.00 0.00 45.07 1.82
5062 12415 3.673902 GGCCATTTTGTTAGCCACATTT 58.326 40.909 0.00 0.00 45.07 2.32
5063 12416 3.333029 GGCCATTTTGTTAGCCACATT 57.667 42.857 0.00 0.00 45.07 2.71
5068 12421 0.972883 TGGTGGCCATTTTGTTAGCC 59.027 50.000 9.72 1.73 45.96 3.93
5069 12422 1.342819 TGTGGTGGCCATTTTGTTAGC 59.657 47.619 9.72 0.00 35.28 3.09
5070 12423 3.069443 ACTTGTGGTGGCCATTTTGTTAG 59.931 43.478 9.72 3.68 35.28 2.34
5071 12424 3.034635 ACTTGTGGTGGCCATTTTGTTA 58.965 40.909 9.72 0.00 35.28 2.41
5072 12425 1.836802 ACTTGTGGTGGCCATTTTGTT 59.163 42.857 9.72 0.00 35.28 2.83
5073 12426 1.138661 CACTTGTGGTGGCCATTTTGT 59.861 47.619 9.72 0.52 41.90 2.83
5074 12427 1.868469 CACTTGTGGTGGCCATTTTG 58.132 50.000 9.72 0.00 41.90 2.44
5086 12439 2.746269 CCAAATCTTGCCACACTTGTG 58.254 47.619 2.13 2.13 45.23 3.33
5087 12440 1.069049 GCCAAATCTTGCCACACTTGT 59.931 47.619 0.00 0.00 0.00 3.16
5088 12441 1.787012 GCCAAATCTTGCCACACTTG 58.213 50.000 0.00 0.00 0.00 3.16
5095 12448 2.001872 CGATTTTGGCCAAATCTTGCC 58.998 47.619 30.78 14.71 46.20 4.52
5096 12449 2.925563 CTCGATTTTGGCCAAATCTTGC 59.074 45.455 30.78 16.55 46.20 4.01
5097 12450 2.925563 GCTCGATTTTGGCCAAATCTTG 59.074 45.455 30.78 22.68 46.20 3.02
5098 12451 2.094026 GGCTCGATTTTGGCCAAATCTT 60.094 45.455 30.78 18.54 46.20 2.40
5099 12452 1.478105 GGCTCGATTTTGGCCAAATCT 59.522 47.619 30.78 20.86 46.20 2.40
5100 12453 1.926561 GGCTCGATTTTGGCCAAATC 58.073 50.000 30.78 25.03 45.29 2.17
5105 12458 1.604278 GTCATAGGCTCGATTTTGGCC 59.396 52.381 4.52 4.52 45.57 5.36
5106 12459 2.288666 TGTCATAGGCTCGATTTTGGC 58.711 47.619 0.00 0.00 0.00 4.52
5107 12460 3.879295 ACATGTCATAGGCTCGATTTTGG 59.121 43.478 0.00 0.00 0.00 3.28
5108 12461 4.260907 CCACATGTCATAGGCTCGATTTTG 60.261 45.833 0.00 0.00 0.00 2.44
5109 12462 3.879295 CCACATGTCATAGGCTCGATTTT 59.121 43.478 0.00 0.00 0.00 1.82
5110 12463 3.134623 TCCACATGTCATAGGCTCGATTT 59.865 43.478 0.00 0.00 0.00 2.17
5111 12464 2.700371 TCCACATGTCATAGGCTCGATT 59.300 45.455 0.00 0.00 0.00 3.34
5112 12465 2.036475 GTCCACATGTCATAGGCTCGAT 59.964 50.000 0.00 0.00 0.00 3.59
5113 12466 1.409064 GTCCACATGTCATAGGCTCGA 59.591 52.381 0.00 0.00 0.00 4.04
5114 12467 1.539065 GGTCCACATGTCATAGGCTCG 60.539 57.143 0.00 0.00 0.00 5.03
5115 12468 1.486310 TGGTCCACATGTCATAGGCTC 59.514 52.381 0.00 0.00 0.00 4.70
5116 12469 1.583556 TGGTCCACATGTCATAGGCT 58.416 50.000 0.00 0.00 0.00 4.58
5117 12470 2.645838 ATGGTCCACATGTCATAGGC 57.354 50.000 0.00 0.00 38.70 3.93
5118 12471 7.009179 AGTTATATGGTCCACATGTCATAGG 57.991 40.000 0.00 0.00 40.82 2.57
5119 12472 9.025041 TCTAGTTATATGGTCCACATGTCATAG 57.975 37.037 0.00 0.00 40.82 2.23
5120 12473 8.950007 TCTAGTTATATGGTCCACATGTCATA 57.050 34.615 0.00 1.06 40.82 2.15
5121 12474 7.855784 TCTAGTTATATGGTCCACATGTCAT 57.144 36.000 0.00 0.00 40.82 3.06
5122 12475 7.669089 TTCTAGTTATATGGTCCACATGTCA 57.331 36.000 0.00 0.00 40.82 3.58
5123 12476 8.958119 TTTTCTAGTTATATGGTCCACATGTC 57.042 34.615 0.00 0.00 40.82 3.06
5124 12477 9.920946 ATTTTTCTAGTTATATGGTCCACATGT 57.079 29.630 0.00 0.00 40.82 3.21
5129 12482 9.515226 GCCATATTTTTCTAGTTATATGGTCCA 57.485 33.333 21.86 0.00 46.07 4.02
5130 12483 9.515226 TGCCATATTTTTCTAGTTATATGGTCC 57.485 33.333 21.86 14.10 46.07 4.46
5137 12490 9.461312 TGTGACTTGCCATATTTTTCTAGTTAT 57.539 29.630 0.00 0.00 0.00 1.89
5138 12491 8.856153 TGTGACTTGCCATATTTTTCTAGTTA 57.144 30.769 0.00 0.00 0.00 2.24
5139 12492 7.759489 TGTGACTTGCCATATTTTTCTAGTT 57.241 32.000 0.00 0.00 0.00 2.24
5140 12493 7.448469 ACTTGTGACTTGCCATATTTTTCTAGT 59.552 33.333 0.00 0.00 0.00 2.57
5141 12494 7.752239 CACTTGTGACTTGCCATATTTTTCTAG 59.248 37.037 0.00 0.00 0.00 2.43
5142 12495 7.230510 ACACTTGTGACTTGCCATATTTTTCTA 59.769 33.333 7.83 0.00 0.00 2.10
5143 12496 6.040842 ACACTTGTGACTTGCCATATTTTTCT 59.959 34.615 7.83 0.00 0.00 2.52
5144 12497 6.215845 ACACTTGTGACTTGCCATATTTTTC 58.784 36.000 7.83 0.00 0.00 2.29
5145 12498 6.160576 ACACTTGTGACTTGCCATATTTTT 57.839 33.333 7.83 0.00 0.00 1.94
5146 12499 5.789643 ACACTTGTGACTTGCCATATTTT 57.210 34.783 7.83 0.00 0.00 1.82
5160 12513 5.632764 TGTTTTGTTCATTGTCACACTTGTG 59.367 36.000 2.75 2.75 46.91 3.33
5161 12514 5.633182 GTGTTTTGTTCATTGTCACACTTGT 59.367 36.000 0.00 0.00 32.14 3.16
5162 12515 5.863397 AGTGTTTTGTTCATTGTCACACTTG 59.137 36.000 0.00 0.00 40.30 3.16
5163 12516 6.024552 AGTGTTTTGTTCATTGTCACACTT 57.975 33.333 0.00 0.00 40.30 3.16
5164 12517 5.643379 AGTGTTTTGTTCATTGTCACACT 57.357 34.783 0.00 0.00 38.80 3.55
5165 12518 5.062058 CCAAGTGTTTTGTTCATTGTCACAC 59.938 40.000 0.00 0.00 34.52 3.82
5166 12519 5.167121 CCAAGTGTTTTGTTCATTGTCACA 58.833 37.500 0.00 0.00 0.00 3.58
5167 12520 4.032786 GCCAAGTGTTTTGTTCATTGTCAC 59.967 41.667 0.00 0.00 0.00 3.67
5168 12521 4.081752 AGCCAAGTGTTTTGTTCATTGTCA 60.082 37.500 0.00 0.00 0.00 3.58
5169 12522 4.432712 AGCCAAGTGTTTTGTTCATTGTC 58.567 39.130 0.00 0.00 0.00 3.18
5170 12523 4.470334 AGCCAAGTGTTTTGTTCATTGT 57.530 36.364 0.00 0.00 0.00 2.71
5171 12524 6.272318 TCTTAGCCAAGTGTTTTGTTCATTG 58.728 36.000 0.00 0.00 33.20 2.82
5172 12525 6.463995 TCTTAGCCAAGTGTTTTGTTCATT 57.536 33.333 0.00 0.00 33.20 2.57
5173 12526 6.040842 ACATCTTAGCCAAGTGTTTTGTTCAT 59.959 34.615 0.00 0.00 33.20 2.57
5174 12527 5.359576 ACATCTTAGCCAAGTGTTTTGTTCA 59.640 36.000 0.00 0.00 33.20 3.18
5175 12528 5.831997 ACATCTTAGCCAAGTGTTTTGTTC 58.168 37.500 0.00 0.00 33.20 3.18
5176 12529 5.505654 CGACATCTTAGCCAAGTGTTTTGTT 60.506 40.000 0.00 0.00 30.89 2.83
5177 12530 4.024048 CGACATCTTAGCCAAGTGTTTTGT 60.024 41.667 0.00 0.00 30.89 2.83
5178 12531 4.024048 ACGACATCTTAGCCAAGTGTTTTG 60.024 41.667 0.00 0.00 30.89 2.44
5179 12532 4.024048 CACGACATCTTAGCCAAGTGTTTT 60.024 41.667 0.00 0.00 30.89 2.43
5180 12533 3.498397 CACGACATCTTAGCCAAGTGTTT 59.502 43.478 0.00 0.00 30.89 2.83
5181 12534 3.067106 CACGACATCTTAGCCAAGTGTT 58.933 45.455 0.00 0.00 30.89 3.32
5182 12535 2.612972 CCACGACATCTTAGCCAAGTGT 60.613 50.000 0.00 0.00 32.35 3.55
5183 12536 2.002586 CCACGACATCTTAGCCAAGTG 58.997 52.381 0.00 0.00 33.20 3.16
5184 12537 1.676014 GCCACGACATCTTAGCCAAGT 60.676 52.381 0.00 0.00 33.20 3.16
5185 12538 1.009829 GCCACGACATCTTAGCCAAG 58.990 55.000 0.00 0.00 0.00 3.61
5186 12539 0.323302 TGCCACGACATCTTAGCCAA 59.677 50.000 0.00 0.00 0.00 4.52
5187 12540 0.541392 ATGCCACGACATCTTAGCCA 59.459 50.000 0.00 0.00 0.00 4.75
5188 12541 0.940126 CATGCCACGACATCTTAGCC 59.060 55.000 0.00 0.00 0.00 3.93
5189 12542 1.594862 GTCATGCCACGACATCTTAGC 59.405 52.381 0.00 0.00 33.43 3.09
5190 12543 3.170791 AGTCATGCCACGACATCTTAG 57.829 47.619 0.00 0.00 35.77 2.18
5191 12544 4.401202 TCTTAGTCATGCCACGACATCTTA 59.599 41.667 0.00 0.00 35.77 2.10
5192 12545 3.195610 TCTTAGTCATGCCACGACATCTT 59.804 43.478 0.00 0.00 35.77 2.40
5193 12546 2.760650 TCTTAGTCATGCCACGACATCT 59.239 45.455 0.00 0.00 35.77 2.90
5194 12547 3.165058 TCTTAGTCATGCCACGACATC 57.835 47.619 0.00 0.00 35.77 3.06
5195 12548 3.827008 ATCTTAGTCATGCCACGACAT 57.173 42.857 0.00 0.00 35.77 3.06
5196 12549 3.610040 AATCTTAGTCATGCCACGACA 57.390 42.857 0.00 0.00 35.77 4.35
5197 12550 5.342525 CGTATAATCTTAGTCATGCCACGAC 59.657 44.000 0.00 0.00 0.00 4.34
5198 12551 5.009310 ACGTATAATCTTAGTCATGCCACGA 59.991 40.000 0.00 0.00 0.00 4.35
5199 12552 5.117135 CACGTATAATCTTAGTCATGCCACG 59.883 44.000 0.00 0.00 0.00 4.94
5200 12553 5.405571 CCACGTATAATCTTAGTCATGCCAC 59.594 44.000 0.00 0.00 0.00 5.01
5201 12554 5.538118 CCACGTATAATCTTAGTCATGCCA 58.462 41.667 0.00 0.00 0.00 4.92
5202 12555 4.389077 GCCACGTATAATCTTAGTCATGCC 59.611 45.833 0.00 0.00 0.00 4.40
5203 12556 4.988540 TGCCACGTATAATCTTAGTCATGC 59.011 41.667 0.00 0.00 0.00 4.06
5204 12557 7.171508 ACATTGCCACGTATAATCTTAGTCATG 59.828 37.037 0.00 0.00 0.00 3.07
5205 12558 7.217200 ACATTGCCACGTATAATCTTAGTCAT 58.783 34.615 0.00 0.00 0.00 3.06
5206 12559 6.578944 ACATTGCCACGTATAATCTTAGTCA 58.421 36.000 0.00 0.00 0.00 3.41
5207 12560 7.478520 AACATTGCCACGTATAATCTTAGTC 57.521 36.000 0.00 0.00 0.00 2.59
5208 12561 7.656137 CCTAACATTGCCACGTATAATCTTAGT 59.344 37.037 0.00 0.00 0.00 2.24
5209 12562 7.360101 GCCTAACATTGCCACGTATAATCTTAG 60.360 40.741 0.00 0.00 0.00 2.18
5210 12563 6.425721 GCCTAACATTGCCACGTATAATCTTA 59.574 38.462 0.00 0.00 0.00 2.10
5211 12564 5.238650 GCCTAACATTGCCACGTATAATCTT 59.761 40.000 0.00 0.00 0.00 2.40
5212 12565 4.755123 GCCTAACATTGCCACGTATAATCT 59.245 41.667 0.00 0.00 0.00 2.40
5213 12566 4.755123 AGCCTAACATTGCCACGTATAATC 59.245 41.667 0.00 0.00 0.00 1.75
5214 12567 4.515191 CAGCCTAACATTGCCACGTATAAT 59.485 41.667 0.00 0.00 0.00 1.28
5215 12568 3.874543 CAGCCTAACATTGCCACGTATAA 59.125 43.478 0.00 0.00 0.00 0.98
5216 12569 3.462982 CAGCCTAACATTGCCACGTATA 58.537 45.455 0.00 0.00 0.00 1.47
5217 12570 2.288666 CAGCCTAACATTGCCACGTAT 58.711 47.619 0.00 0.00 0.00 3.06
5218 12571 1.677518 CCAGCCTAACATTGCCACGTA 60.678 52.381 0.00 0.00 0.00 3.57
5219 12572 0.960364 CCAGCCTAACATTGCCACGT 60.960 55.000 0.00 0.00 0.00 4.49
5220 12573 1.656818 CCCAGCCTAACATTGCCACG 61.657 60.000 0.00 0.00 0.00 4.94
5221 12574 0.323360 TCCCAGCCTAACATTGCCAC 60.323 55.000 0.00 0.00 0.00 5.01
5222 12575 0.407528 TTCCCAGCCTAACATTGCCA 59.592 50.000 0.00 0.00 0.00 4.92
5223 12576 0.817654 GTTCCCAGCCTAACATTGCC 59.182 55.000 0.00 0.00 0.00 4.52
5224 12577 0.817654 GGTTCCCAGCCTAACATTGC 59.182 55.000 0.00 0.00 0.00 3.56
5225 12578 2.214376 TGGTTCCCAGCCTAACATTG 57.786 50.000 0.00 0.00 0.00 2.82
5226 12579 2.897326 GTTTGGTTCCCAGCCTAACATT 59.103 45.455 0.00 0.00 40.01 2.71
5227 12580 2.158385 TGTTTGGTTCCCAGCCTAACAT 60.158 45.455 7.13 0.00 43.16 2.71
5228 12581 1.215673 TGTTTGGTTCCCAGCCTAACA 59.784 47.619 7.13 7.13 44.78 2.41
5229 12582 1.886542 CTGTTTGGTTCCCAGCCTAAC 59.113 52.381 0.00 0.00 40.44 2.34
5230 12583 1.777878 TCTGTTTGGTTCCCAGCCTAA 59.222 47.619 0.00 0.00 33.81 2.69
5231 12584 1.073284 GTCTGTTTGGTTCCCAGCCTA 59.927 52.381 0.00 0.00 33.81 3.93
5232 12585 0.178990 GTCTGTTTGGTTCCCAGCCT 60.179 55.000 0.00 0.00 33.81 4.58
5233 12586 1.179174 GGTCTGTTTGGTTCCCAGCC 61.179 60.000 0.00 0.00 33.81 4.85
5234 12587 1.179174 GGGTCTGTTTGGTTCCCAGC 61.179 60.000 0.00 0.00 38.15 4.85
5235 12588 0.478507 AGGGTCTGTTTGGTTCCCAG 59.521 55.000 0.00 0.00 40.48 4.45
5236 12589 0.930726 AAGGGTCTGTTTGGTTCCCA 59.069 50.000 0.00 0.00 40.48 4.37
5237 12590 2.107726 ACTAAGGGTCTGTTTGGTTCCC 59.892 50.000 0.00 0.00 38.50 3.97
5238 12591 3.503800 ACTAAGGGTCTGTTTGGTTCC 57.496 47.619 0.00 0.00 0.00 3.62
5239 12592 6.473758 AGATAACTAAGGGTCTGTTTGGTTC 58.526 40.000 0.00 0.00 31.67 3.62
5240 12593 6.449830 AGATAACTAAGGGTCTGTTTGGTT 57.550 37.500 0.00 0.00 33.45 3.67
5241 12594 6.449830 AAGATAACTAAGGGTCTGTTTGGT 57.550 37.500 0.00 0.00 0.00 3.67
5242 12595 7.048512 CCTAAGATAACTAAGGGTCTGTTTGG 58.951 42.308 0.00 0.00 0.00 3.28
5243 12596 7.848128 TCCTAAGATAACTAAGGGTCTGTTTG 58.152 38.462 0.00 0.00 0.00 2.93
5244 12597 8.625467 ATCCTAAGATAACTAAGGGTCTGTTT 57.375 34.615 0.00 0.00 0.00 2.83
5245 12598 8.625467 AATCCTAAGATAACTAAGGGTCTGTT 57.375 34.615 0.00 0.00 30.42 3.16
5246 12599 8.068733 AGAATCCTAAGATAACTAAGGGTCTGT 58.931 37.037 0.00 0.00 30.42 3.41
5247 12600 8.364142 CAGAATCCTAAGATAACTAAGGGTCTG 58.636 40.741 0.00 0.00 36.36 3.51
5248 12601 8.068733 ACAGAATCCTAAGATAACTAAGGGTCT 58.931 37.037 0.00 0.00 30.42 3.85
5249 12602 8.252624 ACAGAATCCTAAGATAACTAAGGGTC 57.747 38.462 0.00 0.00 30.42 4.46
5250 12603 8.625467 AACAGAATCCTAAGATAACTAAGGGT 57.375 34.615 0.00 0.00 30.42 4.34
5281 12634 8.397575 TCCTTGCATATGTACTGTGTTAAAAA 57.602 30.769 4.29 0.00 0.00 1.94
5282 12635 7.987750 TCCTTGCATATGTACTGTGTTAAAA 57.012 32.000 4.29 0.00 0.00 1.52
5283 12636 8.574251 AATCCTTGCATATGTACTGTGTTAAA 57.426 30.769 4.29 0.00 0.00 1.52
5284 12637 8.046708 AGAATCCTTGCATATGTACTGTGTTAA 58.953 33.333 4.29 0.00 0.00 2.01
5285 12638 7.564793 AGAATCCTTGCATATGTACTGTGTTA 58.435 34.615 4.29 0.00 0.00 2.41
5286 12639 6.418101 AGAATCCTTGCATATGTACTGTGTT 58.582 36.000 4.29 0.00 0.00 3.32
5287 12640 5.994250 AGAATCCTTGCATATGTACTGTGT 58.006 37.500 4.29 0.00 0.00 3.72
5288 12641 6.286758 AGAGAATCCTTGCATATGTACTGTG 58.713 40.000 4.29 0.00 33.66 3.66
5289 12642 6.491714 AGAGAATCCTTGCATATGTACTGT 57.508 37.500 4.29 0.00 33.66 3.55
5290 12643 7.117523 GCTAAGAGAATCCTTGCATATGTACTG 59.882 40.741 4.29 0.00 33.66 2.74
5291 12644 7.016072 AGCTAAGAGAATCCTTGCATATGTACT 59.984 37.037 4.29 0.00 33.66 2.73
5292 12645 7.117523 CAGCTAAGAGAATCCTTGCATATGTAC 59.882 40.741 4.29 0.00 33.66 2.90
5293 12646 7.015584 TCAGCTAAGAGAATCCTTGCATATGTA 59.984 37.037 4.29 0.00 33.66 2.29
5294 12647 5.996513 CAGCTAAGAGAATCCTTGCATATGT 59.003 40.000 4.29 0.00 33.66 2.29
5295 12648 6.147492 GTCAGCTAAGAGAATCCTTGCATATG 59.853 42.308 0.00 0.00 33.66 1.78
5296 12649 6.043012 AGTCAGCTAAGAGAATCCTTGCATAT 59.957 38.462 0.00 0.00 33.66 1.78
5297 12650 5.365025 AGTCAGCTAAGAGAATCCTTGCATA 59.635 40.000 0.00 0.00 33.66 3.14
5298 12651 4.163839 AGTCAGCTAAGAGAATCCTTGCAT 59.836 41.667 0.00 0.00 33.66 3.96
5299 12652 3.517100 AGTCAGCTAAGAGAATCCTTGCA 59.483 43.478 0.00 0.00 33.66 4.08
5300 12653 4.119136 GAGTCAGCTAAGAGAATCCTTGC 58.881 47.826 0.00 0.00 33.66 4.01
5301 12654 4.142271 ACGAGTCAGCTAAGAGAATCCTTG 60.142 45.833 0.00 0.00 33.66 3.61
5302 12655 4.020543 ACGAGTCAGCTAAGAGAATCCTT 58.979 43.478 0.00 0.00 33.66 3.36
5303 12656 3.626930 ACGAGTCAGCTAAGAGAATCCT 58.373 45.455 0.00 0.00 33.66 3.24
5304 12657 4.335874 TGTACGAGTCAGCTAAGAGAATCC 59.664 45.833 0.00 0.00 33.66 3.01
5305 12658 5.487153 TGTACGAGTCAGCTAAGAGAATC 57.513 43.478 0.00 0.00 0.00 2.52
5306 12659 4.336993 CCTGTACGAGTCAGCTAAGAGAAT 59.663 45.833 0.00 0.00 0.00 2.40
5307 12660 3.690139 CCTGTACGAGTCAGCTAAGAGAA 59.310 47.826 0.00 0.00 0.00 2.87
5308 12661 3.271729 CCTGTACGAGTCAGCTAAGAGA 58.728 50.000 0.00 0.00 0.00 3.10
5309 12662 3.011119 ACCTGTACGAGTCAGCTAAGAG 58.989 50.000 0.00 0.00 0.00 2.85
5310 12663 2.747989 CACCTGTACGAGTCAGCTAAGA 59.252 50.000 0.00 0.00 0.00 2.10
5311 12664 2.732597 GCACCTGTACGAGTCAGCTAAG 60.733 54.545 0.00 0.00 0.00 2.18
5312 12665 1.201647 GCACCTGTACGAGTCAGCTAA 59.798 52.381 0.00 0.00 0.00 3.09
5313 12666 0.809385 GCACCTGTACGAGTCAGCTA 59.191 55.000 0.00 0.00 0.00 3.32
5314 12667 1.587054 GCACCTGTACGAGTCAGCT 59.413 57.895 0.00 0.00 0.00 4.24
5315 12668 1.446272 GGCACCTGTACGAGTCAGC 60.446 63.158 0.00 0.00 0.00 4.26
5316 12669 1.154016 CGGCACCTGTACGAGTCAG 60.154 63.158 0.00 0.00 0.00 3.51
5317 12670 2.959372 CGGCACCTGTACGAGTCA 59.041 61.111 0.00 0.00 0.00 3.41
5318 12671 2.506438 GCGGCACCTGTACGAGTC 60.506 66.667 0.00 0.00 0.00 3.36
5319 12672 2.765250 CTTGCGGCACCTGTACGAGT 62.765 60.000 0.05 0.00 0.00 4.18
5320 12673 2.048597 TTGCGGCACCTGTACGAG 60.049 61.111 0.05 0.00 0.00 4.18
5321 12674 2.048597 CTTGCGGCACCTGTACGA 60.049 61.111 0.05 0.00 0.00 3.43
5322 12675 3.788766 GCTTGCGGCACCTGTACG 61.789 66.667 0.05 0.00 41.35 3.67
5323 12676 3.431725 GGCTTGCGGCACCTGTAC 61.432 66.667 0.05 0.00 44.01 2.90
5324 12677 4.715523 GGGCTTGCGGCACCTGTA 62.716 66.667 0.05 0.00 44.01 2.74
5334 12687 2.910345 TTAACGTTGCGGGGCTTGC 61.910 57.895 11.99 0.00 0.00 4.01
5335 12688 1.081708 GTTAACGTTGCGGGGCTTG 60.082 57.895 11.99 0.00 0.00 4.01
5336 12689 2.609759 CGTTAACGTTGCGGGGCTT 61.610 57.895 19.75 0.00 34.11 4.35
5337 12690 3.045492 CGTTAACGTTGCGGGGCT 61.045 61.111 19.75 0.00 34.11 5.19
5338 12691 4.746951 GCGTTAACGTTGCGGGGC 62.747 66.667 27.28 6.01 42.22 5.80
5339 12692 4.092652 GGCGTTAACGTTGCGGGG 62.093 66.667 27.28 0.00 42.22 5.73
5340 12693 4.433431 CGGCGTTAACGTTGCGGG 62.433 66.667 27.28 8.41 42.22 6.13
5341 12694 4.433431 CCGGCGTTAACGTTGCGG 62.433 66.667 27.28 15.23 42.22 5.69
5342 12695 2.269757 CTACCGGCGTTAACGTTGCG 62.270 60.000 27.28 15.99 42.22 4.85
5343 12696 1.008361 TCTACCGGCGTTAACGTTGC 61.008 55.000 27.28 12.15 42.22 4.17
5344 12697 1.585214 GATCTACCGGCGTTAACGTTG 59.415 52.381 27.28 19.41 42.22 4.10
5345 12698 1.795162 CGATCTACCGGCGTTAACGTT 60.795 52.381 27.28 5.88 42.22 3.99
5346 12699 0.248215 CGATCTACCGGCGTTAACGT 60.248 55.000 27.28 11.56 42.22 3.99
5347 12700 0.248215 ACGATCTACCGGCGTTAACG 60.248 55.000 23.40 23.40 43.27 3.18
5348 12701 1.202177 TGACGATCTACCGGCGTTAAC 60.202 52.381 6.01 0.00 41.26 2.01
5349 12702 1.093972 TGACGATCTACCGGCGTTAA 58.906 50.000 6.01 0.00 41.26 2.01
5350 12703 1.064505 CTTGACGATCTACCGGCGTTA 59.935 52.381 6.01 0.00 41.26 3.18
5351 12704 0.179145 CTTGACGATCTACCGGCGTT 60.179 55.000 6.01 0.00 41.26 4.84
5352 12705 1.432251 CTTGACGATCTACCGGCGT 59.568 57.895 6.01 1.45 41.26 5.68
5353 12706 1.299165 CCTTGACGATCTACCGGCG 60.299 63.158 0.00 0.00 41.26 6.46
5354 12707 0.527817 CACCTTGACGATCTACCGGC 60.528 60.000 0.00 0.00 38.24 6.13
5355 12708 1.100510 TCACCTTGACGATCTACCGG 58.899 55.000 0.00 0.00 0.00 5.28
5356 12709 2.527100 GTTCACCTTGACGATCTACCG 58.473 52.381 0.00 0.00 0.00 4.02
5357 12710 2.418334 GGGTTCACCTTGACGATCTACC 60.418 54.545 0.00 0.00 35.85 3.18
5378 12731 0.179009 AAGGACCATCATGCATCCCG 60.179 55.000 0.00 0.00 30.99 5.14
5379 12732 1.325355 CAAGGACCATCATGCATCCC 58.675 55.000 0.00 0.00 30.99 3.85
5383 12736 0.994247 AGACCAAGGACCATCATGCA 59.006 50.000 0.00 0.00 0.00 3.96
5393 12746 5.473504 GCTAAAAATGACAAGAGACCAAGGA 59.526 40.000 0.00 0.00 0.00 3.36
5401 12756 6.400303 CGCAAATTGGCTAAAAATGACAAGAG 60.400 38.462 2.72 0.00 35.74 2.85
5419 12774 1.200020 GCCAGCTCTAACACGCAAATT 59.800 47.619 0.00 0.00 0.00 1.82
5463 12818 4.082571 AGCTAAAAAGTCATGTGTGCATCC 60.083 41.667 0.00 0.00 31.99 3.51
5516 12873 0.108424 AAGCTTAGAGACGGCAGCAG 60.108 55.000 0.00 0.00 34.49 4.24
5517 12874 0.108615 GAAGCTTAGAGACGGCAGCA 60.109 55.000 0.00 0.00 34.49 4.41
5518 12875 0.108615 TGAAGCTTAGAGACGGCAGC 60.109 55.000 0.00 0.00 0.00 5.25
5576 12933 1.000060 GAGCAATTGTGGCAAAGCAGA 60.000 47.619 7.40 0.00 0.00 4.26
5631 13004 1.068333 ACAGCATCGCCAACACATTTC 60.068 47.619 0.00 0.00 0.00 2.17
5635 13008 1.525765 ACACAGCATCGCCAACACA 60.526 52.632 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.