Multiple sequence alignment - TraesCS6D01G263200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G263200 chr6D 100.000 7013 0 0 2790 9802 372144037 372151049 0.000000e+00 12951.0
1 TraesCS6D01G263200 chr6D 100.000 1764 0 0 713 2476 372141960 372143723 0.000000e+00 3258.0
2 TraesCS6D01G263200 chr6D 100.000 122 0 0 1 122 372141248 372141369 9.910000e-55 226.0
3 TraesCS6D01G263200 chr6D 92.857 112 8 0 3542 3653 126868580 126868469 7.880000e-36 163.0
4 TraesCS6D01G263200 chr6D 92.857 112 8 0 3542 3653 210769529 210769640 7.880000e-36 163.0
5 TraesCS6D01G263200 chr6D 81.081 185 17 9 3653 3821 123940253 123940071 2.220000e-26 132.0
6 TraesCS6D01G263200 chr6D 81.081 185 17 9 3653 3821 220806693 220806511 2.220000e-26 132.0
7 TraesCS6D01G263200 chr6D 81.081 185 17 9 3653 3821 308763371 308763553 2.220000e-26 132.0
8 TraesCS6D01G263200 chr6D 93.258 89 4 1 4453 4541 372145642 372145728 7.990000e-26 130.0
9 TraesCS6D01G263200 chr6D 93.258 89 4 1 4395 4481 372145700 372145788 7.990000e-26 130.0
10 TraesCS6D01G263200 chr6A 96.138 3496 100 10 5558 9025 514025615 514029103 0.000000e+00 5675.0
11 TraesCS6D01G263200 chr6A 92.516 2258 90 19 3239 5460 514023377 514025591 0.000000e+00 3160.0
12 TraesCS6D01G263200 chr6A 94.045 1780 71 19 713 2476 514020348 514022108 0.000000e+00 2667.0
13 TraesCS6D01G263200 chr6A 92.424 462 25 2 2790 3251 514022762 514023213 0.000000e+00 651.0
14 TraesCS6D01G263200 chr6A 85.341 689 34 18 9107 9782 514029101 514029735 0.000000e+00 651.0
15 TraesCS6D01G263200 chr6A 92.857 140 10 0 2790 2929 514022156 514022295 4.640000e-48 204.0
16 TraesCS6D01G263200 chr6A 93.162 117 7 1 4395 4510 514024545 514024661 4.710000e-38 171.0
17 TraesCS6D01G263200 chr6A 93.750 112 7 0 3542 3653 270600497 270600386 1.690000e-37 169.0
18 TraesCS6D01G263200 chr6A 95.000 100 4 1 4314 4413 457398008 457398106 1.320000e-33 156.0
19 TraesCS6D01G263200 chr6A 93.407 91 4 1 4453 4543 514024516 514024604 6.180000e-27 134.0
20 TraesCS6D01G263200 chr6A 94.253 87 5 0 4395 4481 514024574 514024660 6.180000e-27 134.0
21 TraesCS6D01G263200 chr6B 95.456 3433 95 9 5558 8956 557421224 557424629 0.000000e+00 5419.0
22 TraesCS6D01G263200 chr6B 93.318 1766 54 17 713 2443 557415703 557417439 0.000000e+00 2549.0
23 TraesCS6D01G263200 chr6B 95.595 840 34 2 3862 4701 557419586 557420422 0.000000e+00 1343.0
24 TraesCS6D01G263200 chr6B 92.428 766 38 7 4701 5460 557420449 557421200 0.000000e+00 1075.0
25 TraesCS6D01G263200 chr6B 91.264 641 25 4 3239 3873 557418355 557418970 0.000000e+00 845.0
26 TraesCS6D01G263200 chr6B 89.068 622 28 13 9107 9719 557424669 557425259 0.000000e+00 736.0
27 TraesCS6D01G263200 chr6B 93.939 462 25 3 2790 3251 557417748 557418206 0.000000e+00 695.0
28 TraesCS6D01G263200 chr6B 93.396 106 7 0 5458 5563 226361517 226361622 3.660000e-34 158.0
29 TraesCS6D01G263200 chr6B 91.667 108 7 2 4312 4419 503532845 503532740 2.210000e-31 148.0
30 TraesCS6D01G263200 chr6B 92.308 91 5 1 4453 4543 557420118 557420206 2.870000e-25 128.0
31 TraesCS6D01G263200 chr6B 93.103 87 6 0 4395 4481 557420176 557420262 2.870000e-25 128.0
32 TraesCS6D01G263200 chr6B 97.778 45 1 0 8981 9025 557424627 557424671 2.940000e-10 78.7
33 TraesCS6D01G263200 chr4B 87.500 168 20 1 4111 4277 10677318 10677485 1.000000e-44 193.0
34 TraesCS6D01G263200 chr4B 92.857 112 8 0 3542 3653 17496248 17496359 7.880000e-36 163.0
35 TraesCS6D01G263200 chr4B 82.873 181 16 7 4511 4676 172516651 172516831 2.210000e-31 148.0
36 TraesCS6D01G263200 chr2D 87.500 168 20 1 4111 4277 174475318 174475485 1.000000e-44 193.0
37 TraesCS6D01G263200 chr2D 92.727 110 7 1 5458 5566 169037568 169037677 3.660000e-34 158.0
38 TraesCS6D01G263200 chr2D 93.396 106 7 0 5458 5563 296364048 296364153 3.660000e-34 158.0
39 TraesCS6D01G263200 chr2D 81.622 185 16 11 3653 3821 82738516 82738698 4.770000e-28 137.0
40 TraesCS6D01G263200 chr2B 87.500 168 20 1 4111 4277 29850384 29850551 1.000000e-44 193.0
41 TraesCS6D01G263200 chr2B 93.636 110 7 0 3542 3651 399342135 399342026 2.190000e-36 165.0
42 TraesCS6D01G263200 chr2B 93.396 106 7 0 5458 5563 366017680 366017575 3.660000e-34 158.0
43 TraesCS6D01G263200 chr2B 91.228 114 6 2 5453 5563 560444269 560444381 1.710000e-32 152.0
44 TraesCS6D01G263200 chr2B 94.000 100 5 1 4314 4413 150605979 150606077 6.130000e-32 150.0
45 TraesCS6D01G263200 chr2B 92.929 99 4 2 9021 9119 142245672 142245577 3.690000e-29 141.0
46 TraesCS6D01G263200 chr2B 85.714 105 11 4 9133 9234 599664410 599664513 3.740000e-19 108.0
47 TraesCS6D01G263200 chr4D 86.705 173 22 1 4106 4277 353677786 353677958 3.610000e-44 191.0
48 TraesCS6D01G263200 chr4D 87.273 165 20 1 4114 4277 384937973 384937809 4.670000e-43 187.0
49 TraesCS6D01G263200 chr4D 85.311 177 25 1 4102 4277 32734250 32734074 2.170000e-41 182.0
50 TraesCS6D01G263200 chr4D 90.826 109 9 1 4314 4422 346468071 346467964 2.850000e-30 145.0
51 TraesCS6D01G263200 chr1D 86.667 165 21 1 4114 4277 207879236 207879072 2.170000e-41 182.0
52 TraesCS6D01G263200 chr1D 83.152 184 16 8 4511 4679 406409241 406409058 4.740000e-33 154.0
53 TraesCS6D01G263200 chr1D 94.845 97 4 1 9012 9108 192809908 192810003 6.130000e-32 150.0
54 TraesCS6D01G263200 chr1D 95.652 92 4 0 4585 4676 165548587 165548678 2.210000e-31 148.0
55 TraesCS6D01G263200 chr1D 78.894 199 33 6 9108 9300 371220049 371220244 1.030000e-24 126.0
56 TraesCS6D01G263200 chr1D 80.000 130 20 4 9108 9232 461118498 461118370 3.770000e-14 91.6
57 TraesCS6D01G263200 chr3B 95.413 109 5 0 3542 3650 180277635 180277527 3.640000e-39 174.0
58 TraesCS6D01G263200 chr3B 94.737 95 5 0 9022 9116 415928090 415928184 2.210000e-31 148.0
59 TraesCS6D01G263200 chr3A 94.340 106 6 0 5458 5563 600923077 600923182 7.880000e-36 163.0
60 TraesCS6D01G263200 chr3A 95.699 93 4 0 4584 4676 138337111 138337203 6.130000e-32 150.0
61 TraesCS6D01G263200 chr5D 90.323 124 11 1 3531 3653 251307878 251307755 2.830000e-35 161.0
62 TraesCS6D01G263200 chr5D 94.286 105 5 1 4309 4413 169960502 169960605 1.020000e-34 159.0
63 TraesCS6D01G263200 chr5D 93.204 103 6 1 4311 4413 206688098 206688199 6.130000e-32 150.0
64 TraesCS6D01G263200 chr5D 81.915 188 19 11 3653 3828 114170514 114170330 2.850000e-30 145.0
65 TraesCS6D01G263200 chr5D 81.152 191 18 9 3647 3821 320481007 320480819 4.770000e-28 137.0
66 TraesCS6D01G263200 chr5D 78.824 170 29 4 9114 9276 393615878 393616047 3.740000e-19 108.0
67 TraesCS6D01G263200 chr2A 92.727 110 7 1 5458 5566 180984003 180983894 3.660000e-34 158.0
68 TraesCS6D01G263200 chr2A 89.381 113 7 4 4568 4680 393116223 393116330 4.770000e-28 137.0
69 TraesCS6D01G263200 chr7B 93.333 105 7 0 5458 5562 213467937 213468041 1.320000e-33 156.0
70 TraesCS6D01G263200 chr7B 95.699 93 4 0 9023 9115 350387432 350387524 6.130000e-32 150.0
71 TraesCS6D01G263200 chr7B 93.069 101 4 3 9021 9120 681769395 681769297 2.850000e-30 145.0
72 TraesCS6D01G263200 chr7B 79.688 128 22 3 9108 9231 509511297 509511424 1.360000e-13 89.8
73 TraesCS6D01G263200 chr3D 93.333 105 7 0 5459 5563 87926161 87926057 1.320000e-33 156.0
74 TraesCS6D01G263200 chr3D 92.453 106 5 3 9020 9125 16318063 16318165 2.210000e-31 148.0
75 TraesCS6D01G263200 chr7A 94.792 96 5 0 4585 4680 309472413 309472318 6.130000e-32 150.0
76 TraesCS6D01G263200 chr5A 93.204 103 6 1 4311 4413 265550135 265550236 6.130000e-32 150.0
77 TraesCS6D01G263200 chr5A 82.682 179 19 8 3653 3821 141362986 141362810 2.210000e-31 148.0
78 TraesCS6D01G263200 chr5A 82.576 132 17 3 9108 9233 495380282 495380413 2.890000e-20 111.0
79 TraesCS6D01G263200 chr4A 82.703 185 17 8 4511 4680 608988214 608988398 6.130000e-32 150.0
80 TraesCS6D01G263200 chr4A 90.598 117 6 5 9011 9125 691017933 691017820 6.130000e-32 150.0
81 TraesCS6D01G263200 chr7D 92.929 99 7 0 9021 9119 514661126 514661028 2.850000e-30 145.0
82 TraesCS6D01G263200 chr5B 90.741 108 7 2 9013 9119 550844838 550844943 3.690000e-29 141.0
83 TraesCS6D01G263200 chr1A 79.762 168 28 2 9114 9276 470396994 470397160 6.220000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G263200 chr6D 372141248 372151049 9801 False 5478.333333 12951 100.000000 1 9802 3 chr6D.!!$F3 9801
1 TraesCS6D01G263200 chr6A 514020348 514029735 9387 False 1494.111111 5675 92.682556 713 9782 9 chr6A.!!$F2 9069
2 TraesCS6D01G263200 chr6B 557415703 557425259 9556 False 1299.670000 5419 93.425700 713 9719 10 chr6B.!!$F2 9006

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
120 121 1.003696 GCCTCTAGTTTGACAAGGCCT 59.996 52.381 0.00 0.0 45.45 5.19 F
1569 1571 1.202114 TCGAAGCAATTTGGTGATGCC 59.798 47.619 1.18 0.0 40.93 4.40 F
2923 2962 0.457851 AAGCCGAGTCGAAGATCCTG 59.542 55.000 15.64 0.0 40.67 3.86 F
3191 3827 0.179032 TGTCCAGGACGTGCACAATT 60.179 50.000 18.64 0.0 34.95 2.32 F
3769 4582 0.342665 AATTTGCCCATCCCATCCCA 59.657 50.000 0.00 0.0 0.00 4.37 F
5236 6714 0.106419 TCGGGAGCCAAAGTGGTTTT 60.106 50.000 0.00 0.0 40.46 2.43 F
5466 6949 0.391228 GCTTGGCTAGCTACTCCCTC 59.609 60.000 15.72 0.0 46.77 4.30 F
5471 6954 0.669619 GCTAGCTACTCCCTCCGTTC 59.330 60.000 7.70 0.0 0.00 3.95 F
5473 6956 0.924823 TAGCTACTCCCTCCGTTCCT 59.075 55.000 0.00 0.0 0.00 3.36 F
5475 6958 1.287146 AGCTACTCCCTCCGTTCCTAA 59.713 52.381 0.00 0.0 0.00 2.69 F
6475 7965 1.298859 GGACACAAAGGTAGCGGCAG 61.299 60.000 1.45 0.0 0.00 4.85 F
7514 9007 0.944386 CAAGGTAGCGCTGTTGTTGT 59.056 50.000 22.90 0.0 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1572 1574 0.108186 GCCTCACATCCACATCGACA 60.108 55.000 0.00 0.00 0.00 4.35 R
3150 3786 0.594796 CTGCAACACGCTGTTTTCCC 60.595 55.000 0.00 0.00 38.77 3.97 R
4216 5666 0.608130 GGGGTGAGGATTGGCAAAAC 59.392 55.000 3.01 0.00 0.00 2.43 R
5060 6538 0.392998 ACTGCCAGGGCGATTAACTG 60.393 55.000 5.74 0.00 45.51 3.16 R
5281 6759 1.867233 CAACGAGACCAAAGTCACAGG 59.133 52.381 0.00 0.00 46.15 4.00 R
6423 7913 0.647410 CCTGATTGTTACTCGCAGCG 59.353 55.000 9.06 9.06 0.00 5.18 R
6475 7965 2.032290 GGTTTACGGTCACAGCTTGAAC 60.032 50.000 4.44 4.44 38.76 3.18 R
6775 8265 4.103785 ACAATGCCAGTCAGCTATAGGAAT 59.896 41.667 1.04 0.00 0.00 3.01 R
6855 8345 6.117911 TGTGATGTTACAACAGTTCTTGTG 57.882 37.500 0.00 0.00 43.04 3.33 R
7100 8590 7.779798 AGGAGGTTTCAGCATTATTAGCATTTA 59.220 33.333 0.00 0.00 0.00 1.40 R
7859 9352 1.823295 GCCTCTTCATGGCGAGGTA 59.177 57.895 23.42 0.00 46.75 3.08 R
9091 10615 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.530633 AACGATACTATTTCTTCATCAAGGTAC 57.469 33.333 0.00 0.00 0.00 3.34
27 28 8.142551 ACGATACTATTTCTTCATCAAGGTACC 58.857 37.037 2.73 2.73 0.00 3.34
28 29 8.141909 CGATACTATTTCTTCATCAAGGTACCA 58.858 37.037 15.94 0.00 0.00 3.25
73 74 8.728088 AATAAAGACTTGATGCTAAACAAACG 57.272 30.769 0.00 0.00 0.00 3.60
74 75 6.371809 AAAGACTTGATGCTAAACAAACGA 57.628 33.333 0.00 0.00 0.00 3.85
75 76 6.371809 AAGACTTGATGCTAAACAAACGAA 57.628 33.333 0.00 0.00 0.00 3.85
76 77 6.371809 AGACTTGATGCTAAACAAACGAAA 57.628 33.333 0.00 0.00 0.00 3.46
77 78 6.430451 AGACTTGATGCTAAACAAACGAAAG 58.570 36.000 0.00 0.00 0.00 2.62
78 79 6.260050 AGACTTGATGCTAAACAAACGAAAGA 59.740 34.615 0.00 0.00 0.00 2.52
79 80 6.199393 ACTTGATGCTAAACAAACGAAAGAC 58.801 36.000 0.00 0.00 0.00 3.01
80 81 6.038271 ACTTGATGCTAAACAAACGAAAGACT 59.962 34.615 0.00 0.00 0.00 3.24
81 82 6.371809 TGATGCTAAACAAACGAAAGACTT 57.628 33.333 0.00 0.00 0.00 3.01
82 83 6.198687 TGATGCTAAACAAACGAAAGACTTG 58.801 36.000 0.00 0.00 34.93 3.16
83 84 5.804692 TGCTAAACAAACGAAAGACTTGA 57.195 34.783 0.00 0.00 33.67 3.02
84 85 6.371809 TGCTAAACAAACGAAAGACTTGAT 57.628 33.333 0.00 0.00 33.67 2.57
85 86 6.198687 TGCTAAACAAACGAAAGACTTGATG 58.801 36.000 0.00 0.00 33.67 3.07
86 87 5.115622 GCTAAACAAACGAAAGACTTGATGC 59.884 40.000 0.00 0.00 33.67 3.91
87 88 4.900635 AACAAACGAAAGACTTGATGCT 57.099 36.364 0.00 0.00 33.67 3.79
88 89 6.371809 AAACAAACGAAAGACTTGATGCTA 57.628 33.333 0.00 0.00 33.67 3.49
89 90 6.371809 AACAAACGAAAGACTTGATGCTAA 57.628 33.333 0.00 0.00 33.67 3.09
90 91 6.371809 ACAAACGAAAGACTTGATGCTAAA 57.628 33.333 0.00 0.00 33.67 1.85
91 92 6.199393 ACAAACGAAAGACTTGATGCTAAAC 58.801 36.000 0.00 0.00 33.67 2.01
92 93 6.183360 ACAAACGAAAGACTTGATGCTAAACA 60.183 34.615 0.00 0.00 33.67 2.83
93 94 6.371809 AACGAAAGACTTGATGCTAAACAA 57.628 33.333 0.00 0.00 0.00 2.83
94 95 6.371809 ACGAAAGACTTGATGCTAAACAAA 57.628 33.333 0.00 0.00 0.00 2.83
95 96 6.199393 ACGAAAGACTTGATGCTAAACAAAC 58.801 36.000 0.00 0.00 0.00 2.93
96 97 5.336990 CGAAAGACTTGATGCTAAACAAACG 59.663 40.000 0.00 0.00 0.00 3.60
97 98 6.371809 AAAGACTTGATGCTAAACAAACGA 57.628 33.333 0.00 0.00 0.00 3.85
98 99 6.371809 AAGACTTGATGCTAAACAAACGAA 57.628 33.333 0.00 0.00 0.00 3.85
99 100 6.371809 AGACTTGATGCTAAACAAACGAAA 57.628 33.333 0.00 0.00 0.00 3.46
100 101 6.430451 AGACTTGATGCTAAACAAACGAAAG 58.570 36.000 0.00 0.00 0.00 2.62
101 102 4.976116 ACTTGATGCTAAACAAACGAAAGC 59.024 37.500 0.00 0.00 0.00 3.51
102 103 3.896122 TGATGCTAAACAAACGAAAGCC 58.104 40.909 0.00 0.00 32.14 4.35
103 104 3.568007 TGATGCTAAACAAACGAAAGCCT 59.432 39.130 0.00 0.00 32.14 4.58
104 105 3.619233 TGCTAAACAAACGAAAGCCTC 57.381 42.857 0.00 0.00 32.14 4.70
105 106 3.211045 TGCTAAACAAACGAAAGCCTCT 58.789 40.909 0.00 0.00 32.14 3.69
106 107 4.382291 TGCTAAACAAACGAAAGCCTCTA 58.618 39.130 0.00 0.00 32.14 2.43
107 108 4.451096 TGCTAAACAAACGAAAGCCTCTAG 59.549 41.667 0.00 0.00 32.14 2.43
108 109 4.451435 GCTAAACAAACGAAAGCCTCTAGT 59.549 41.667 0.00 0.00 0.00 2.57
109 110 5.049612 GCTAAACAAACGAAAGCCTCTAGTT 60.050 40.000 0.00 0.00 0.00 2.24
110 111 5.830000 AAACAAACGAAAGCCTCTAGTTT 57.170 34.783 0.00 0.00 35.68 2.66
114 115 3.746045 ACGAAAGCCTCTAGTTTGACA 57.254 42.857 0.00 0.00 0.00 3.58
115 116 4.067972 ACGAAAGCCTCTAGTTTGACAA 57.932 40.909 0.00 0.00 0.00 3.18
116 117 4.058817 ACGAAAGCCTCTAGTTTGACAAG 58.941 43.478 0.00 0.00 0.00 3.16
117 118 3.433615 CGAAAGCCTCTAGTTTGACAAGG 59.566 47.826 0.00 0.00 0.00 3.61
119 120 1.454201 GCCTCTAGTTTGACAAGGCC 58.546 55.000 0.00 0.00 45.45 5.19
120 121 1.003696 GCCTCTAGTTTGACAAGGCCT 59.996 52.381 0.00 0.00 45.45 5.19
121 122 2.236395 GCCTCTAGTTTGACAAGGCCTA 59.764 50.000 5.16 0.00 45.45 3.93
749 750 2.058001 ATCCACGCCGTCCATCTGA 61.058 57.895 0.00 0.00 0.00 3.27
756 757 3.849951 CGTCCATCTGACCCCGGG 61.850 72.222 15.80 15.80 41.18 5.73
865 866 1.373497 CGGAAACTCTGCGTGCTCT 60.373 57.895 0.00 0.00 33.55 4.09
983 984 4.658786 ACGCCCTCTCAACCCCCT 62.659 66.667 0.00 0.00 0.00 4.79
1496 1498 1.749063 GGTTTGTGGATTCCCGATTCC 59.251 52.381 0.00 0.00 34.29 3.01
1552 1554 1.935873 CGTACTAGTGACCGGAATCGA 59.064 52.381 9.46 0.00 39.00 3.59
1568 1570 2.634982 TCGAAGCAATTTGGTGATGC 57.365 45.000 1.18 0.00 40.34 3.91
1569 1571 1.202114 TCGAAGCAATTTGGTGATGCC 59.798 47.619 1.18 0.00 40.93 4.40
1570 1572 1.632422 GAAGCAATTTGGTGATGCCG 58.368 50.000 1.18 0.00 40.93 5.69
1571 1573 1.202114 GAAGCAATTTGGTGATGCCGA 59.798 47.619 1.18 0.00 40.93 5.54
1572 1574 1.477553 AGCAATTTGGTGATGCCGAT 58.522 45.000 0.00 0.00 40.93 4.18
1573 1575 1.135527 AGCAATTTGGTGATGCCGATG 59.864 47.619 0.00 0.00 40.93 3.84
1581 1583 0.578683 GTGATGCCGATGTCGATGTG 59.421 55.000 3.62 0.00 43.02 3.21
1614 1616 4.678622 TGCTCGCGTCTATCAAAATTCTA 58.321 39.130 5.77 0.00 0.00 2.10
1700 1702 8.604035 GTCTGCTGATTTTTCGATATAGTTCAA 58.396 33.333 0.00 0.00 0.00 2.69
1703 1705 7.132863 GCTGATTTTTCGATATAGTTCAACCC 58.867 38.462 0.00 0.00 0.00 4.11
1780 1782 2.750237 GGATTTTGGCCGAGCGGT 60.750 61.111 10.94 0.00 37.65 5.68
1983 1986 3.841643 CCAATTGCTTACTCAAGGCTTG 58.158 45.455 21.17 21.17 31.96 4.01
2068 2072 4.202673 ACAAACTGTGATATCCCAAACCCT 60.203 41.667 0.00 0.00 0.00 4.34
2090 2094 6.540189 CCCTATTTAGGATCACAACTTCACTG 59.460 42.308 5.16 0.00 46.63 3.66
2091 2095 7.106239 CCTATTTAGGATCACAACTTCACTGT 58.894 38.462 0.00 0.00 46.63 3.55
2092 2096 8.258007 CCTATTTAGGATCACAACTTCACTGTA 58.742 37.037 0.00 0.00 46.63 2.74
2093 2097 9.307121 CTATTTAGGATCACAACTTCACTGTAG 57.693 37.037 0.00 0.00 0.00 2.74
2094 2098 4.543590 AGGATCACAACTTCACTGTAGG 57.456 45.455 0.00 0.00 0.00 3.18
2095 2099 4.160329 AGGATCACAACTTCACTGTAGGA 58.840 43.478 0.00 0.00 0.00 2.94
2096 2100 4.021016 AGGATCACAACTTCACTGTAGGAC 60.021 45.833 0.00 0.00 0.00 3.85
2097 2101 3.364889 TCACAACTTCACTGTAGGACG 57.635 47.619 0.00 0.00 0.00 4.79
2098 2102 2.691526 TCACAACTTCACTGTAGGACGT 59.308 45.455 0.00 0.00 0.00 4.34
2140 2144 6.352516 GGATACATTGGAGAATTGAGTCTGT 58.647 40.000 0.00 0.00 0.00 3.41
2150 2172 6.772716 GGAGAATTGAGTCTGTAGAGAGAGAT 59.227 42.308 0.00 0.00 0.00 2.75
2180 2219 0.899019 GGGGAAGGTCAGAGACAGAC 59.101 60.000 0.00 0.00 33.68 3.51
2258 2297 7.231722 ACACCATACAGTCATCCTTATACTCTC 59.768 40.741 0.00 0.00 0.00 3.20
2359 2398 2.041115 GGCTCAAACGCTCCTTCCC 61.041 63.158 0.00 0.00 0.00 3.97
2369 2408 1.984570 CTCCTTCCCGCCTCACTCA 60.985 63.158 0.00 0.00 0.00 3.41
2377 2416 2.665603 GCCTCACTCACCTGGTCC 59.334 66.667 0.00 0.00 0.00 4.46
2438 2477 1.153086 GCAGAGCTGTACCCCCATG 60.153 63.158 0.00 0.00 0.00 3.66
2445 2484 0.820891 CTGTACCCCCATGCATCAGC 60.821 60.000 0.00 0.00 42.57 4.26
2448 2487 1.998444 TACCCCCATGCATCAGCCTG 61.998 60.000 0.00 0.00 41.13 4.85
2853 2892 9.902684 TTATTATCATTTTACCACGGTAAAGGA 57.097 29.630 18.26 18.75 46.80 3.36
2859 2898 1.821216 ACCACGGTAAAGGATGCAAG 58.179 50.000 0.00 0.00 0.00 4.01
2867 2906 1.720781 AAAGGATGCAAGGTGCCTTT 58.279 45.000 12.31 12.31 44.23 3.11
2923 2962 0.457851 AAGCCGAGTCGAAGATCCTG 59.542 55.000 15.64 0.00 40.67 3.86
2931 2970 4.439426 CGAGTCGAAGATCCTGTGATTTCT 60.439 45.833 6.73 0.00 40.67 2.52
2932 2971 5.004922 AGTCGAAGATCCTGTGATTTCTC 57.995 43.478 0.00 0.00 40.67 2.87
3089 3725 3.748083 ACATTGACTTGTGATCTGTGCT 58.252 40.909 0.00 0.00 0.00 4.40
3098 3734 6.237901 ACTTGTGATCTGTGCTAAAATGGTA 58.762 36.000 0.00 0.00 0.00 3.25
3166 3802 2.292016 TGTATGGGAAAACAGCGTGTTG 59.708 45.455 4.51 0.00 40.14 3.33
3191 3827 0.179032 TGTCCAGGACGTGCACAATT 60.179 50.000 18.64 0.00 34.95 2.32
3212 3848 7.596248 ACAATTGATATTAATTTCATCAGCGGC 59.404 33.333 13.59 0.00 30.77 6.53
3243 3879 1.755380 GTACACGAGATAGGTGGGCTT 59.245 52.381 0.00 0.00 39.69 4.35
3262 4075 4.513318 GGCTTAGCTATGACACTTTGATCC 59.487 45.833 10.67 0.00 0.00 3.36
3286 4099 6.253298 CCTGATGTTGGCACGTAAATAAATTG 59.747 38.462 0.00 0.00 0.00 2.32
3308 4121 4.586841 TGTACTGGCTTTTTAACCTTGCAT 59.413 37.500 0.00 0.00 0.00 3.96
3340 4153 5.958955 AGCAAGAAAAGTTCTAATGGATGC 58.041 37.500 3.13 3.13 39.61 3.91
3435 4248 9.253832 TGGATGTGTAAAAATGGAATGATAAGT 57.746 29.630 0.00 0.00 0.00 2.24
3448 4261 5.696724 GGAATGATAAGTAATCCACCAGTCG 59.303 44.000 0.00 0.00 33.22 4.18
3456 4269 6.045072 AGTAATCCACCAGTCGAATTGTAA 57.955 37.500 0.00 0.00 0.00 2.41
3516 4329 9.367444 CTCTAATTCGTCTACACCAAACTTATT 57.633 33.333 0.00 0.00 0.00 1.40
3517 4330 9.146984 TCTAATTCGTCTACACCAAACTTATTG 57.853 33.333 0.00 0.00 0.00 1.90
3518 4331 7.972832 AATTCGTCTACACCAAACTTATTGA 57.027 32.000 0.00 0.00 0.00 2.57
3519 4332 7.596749 ATTCGTCTACACCAAACTTATTGAG 57.403 36.000 0.00 0.00 0.00 3.02
3520 4333 5.475719 TCGTCTACACCAAACTTATTGAGG 58.524 41.667 0.00 0.00 0.00 3.86
3521 4334 5.244402 TCGTCTACACCAAACTTATTGAGGA 59.756 40.000 0.00 0.00 0.00 3.71
3522 4335 6.070995 TCGTCTACACCAAACTTATTGAGGAT 60.071 38.462 0.00 0.00 0.00 3.24
3523 4336 6.036083 CGTCTACACCAAACTTATTGAGGATG 59.964 42.308 0.00 0.00 0.00 3.51
3524 4337 6.879458 GTCTACACCAAACTTATTGAGGATGT 59.121 38.462 0.00 0.00 0.00 3.06
3525 4338 8.038944 GTCTACACCAAACTTATTGAGGATGTA 58.961 37.037 0.00 0.00 0.00 2.29
3526 4339 8.768397 TCTACACCAAACTTATTGAGGATGTAT 58.232 33.333 0.00 0.00 0.00 2.29
3527 4340 9.396022 CTACACCAAACTTATTGAGGATGTATT 57.604 33.333 0.00 0.00 0.00 1.89
3528 4341 8.055279 ACACCAAACTTATTGAGGATGTATTG 57.945 34.615 0.00 0.00 0.00 1.90
3529 4342 6.974622 CACCAAACTTATTGAGGATGTATTGC 59.025 38.462 0.00 0.00 0.00 3.56
3530 4343 6.663093 ACCAAACTTATTGAGGATGTATTGCA 59.337 34.615 0.00 0.00 0.00 4.08
3531 4344 7.342799 ACCAAACTTATTGAGGATGTATTGCAT 59.657 33.333 0.00 0.00 41.24 3.96
3532 4345 8.199449 CCAAACTTATTGAGGATGTATTGCATT 58.801 33.333 0.00 0.00 38.06 3.56
3533 4346 9.590451 CAAACTTATTGAGGATGTATTGCATTT 57.410 29.630 0.00 0.00 38.06 2.32
3534 4347 9.807649 AAACTTATTGAGGATGTATTGCATTTC 57.192 29.630 0.00 0.00 38.06 2.17
3535 4348 8.757982 ACTTATTGAGGATGTATTGCATTTCT 57.242 30.769 0.00 0.00 38.06 2.52
3536 4349 9.193806 ACTTATTGAGGATGTATTGCATTTCTT 57.806 29.630 0.00 0.00 38.06 2.52
3539 4352 8.937634 ATTGAGGATGTATTGCATTTCTTTTC 57.062 30.769 0.00 0.00 38.06 2.29
3703 4516 2.081161 GCCCTGACATCCCCATCCT 61.081 63.158 0.00 0.00 0.00 3.24
3712 4525 4.533707 TGACATCCCCATCCTCATCTATTC 59.466 45.833 0.00 0.00 0.00 1.75
3761 4574 1.069049 CGGGGATGAAATTTGCCCATC 59.931 52.381 17.54 13.44 44.60 3.51
3769 4582 0.342665 AATTTGCCCATCCCATCCCA 59.657 50.000 0.00 0.00 0.00 4.37
3770 4583 0.569204 ATTTGCCCATCCCATCCCAT 59.431 50.000 0.00 0.00 0.00 4.00
3772 4585 0.398806 TTGCCCATCCCATCCCATTG 60.399 55.000 0.00 0.00 0.00 2.82
3849 4672 4.549155 AGGCACTCTAGCTGGTGT 57.451 55.556 14.54 8.27 36.03 4.16
3850 4673 2.765352 AGGCACTCTAGCTGGTGTT 58.235 52.632 1.62 0.00 36.03 3.32
3856 4679 1.072331 ACTCTAGCTGGTGTTTGGGTG 59.928 52.381 0.00 0.00 0.00 4.61
3866 5316 1.903404 GTTTGGGTGGTGGCTGAGG 60.903 63.158 0.00 0.00 0.00 3.86
3893 5343 2.016604 GCAACATGCCCGGATAAGACA 61.017 52.381 0.73 0.00 37.42 3.41
3921 5371 1.907255 ACCTTTGGACCTAGTGCTACC 59.093 52.381 0.00 0.00 0.00 3.18
4049 5499 6.509317 TCTGCGAATTTGTTTGTGAAATTC 57.491 33.333 0.00 0.00 42.56 2.17
4055 5505 7.169140 GCGAATTTGTTTGTGAAATTCTTAGGT 59.831 33.333 13.32 0.00 43.28 3.08
4064 5514 3.187637 TGAAATTCTTAGGTTTGACCGCG 59.812 43.478 0.00 0.00 44.90 6.46
4083 5533 4.267690 CCGCGTTGTGTATATATAGGCATG 59.732 45.833 4.92 0.00 0.00 4.06
4097 5547 0.740737 GGCATGTACATGGTCCAAGC 59.259 55.000 31.63 18.16 39.16 4.01
4144 5594 0.981943 GGTATCGGGTATGGGGAAGG 59.018 60.000 0.00 0.00 0.00 3.46
4149 5599 2.391972 GGGTATGGGGAAGGGGGTG 61.392 68.421 0.00 0.00 0.00 4.61
4151 5601 1.642513 GGTATGGGGAAGGGGGTGTC 61.643 65.000 0.00 0.00 0.00 3.67
4170 5620 1.192146 CGTCCCCATCCCCATCGTAT 61.192 60.000 0.00 0.00 0.00 3.06
4229 5679 1.644509 GGAAGGGTTTTGCCAATCCT 58.355 50.000 0.00 0.00 39.25 3.24
4295 5745 0.893270 CAAAGGCCATTGTCGTCCCA 60.893 55.000 12.62 0.00 0.00 4.37
4322 5772 1.364901 CGTACGACACACCCCTGTT 59.635 57.895 10.44 0.00 0.00 3.16
4421 5871 2.619332 CCCCGACCTCTCTCGATATCAT 60.619 54.545 3.12 0.00 35.58 2.45
4422 5872 3.085533 CCCGACCTCTCTCGATATCATT 58.914 50.000 3.12 0.00 35.58 2.57
4481 5931 3.119673 CCCGACCTCTCTTGATATCATCG 60.120 52.174 6.17 10.54 0.00 3.84
4506 5956 1.149288 ACCCCGGCCTCTCTTGATATA 59.851 52.381 0.00 0.00 0.00 0.86
4507 5957 2.225650 ACCCCGGCCTCTCTTGATATAT 60.226 50.000 0.00 0.00 0.00 0.86
4581 6031 1.225855 ATGCACGTTGTATATGCCCG 58.774 50.000 0.00 0.00 38.63 6.13
4684 6134 3.271729 GGACCCGATCCTTTCTTTTCTC 58.728 50.000 0.00 0.00 45.22 2.87
4718 6195 6.861065 AATATTGGGACACGTAATTAGCTG 57.139 37.500 0.00 0.00 39.29 4.24
4726 6203 5.135508 ACACGTAATTAGCTGAAGTCAGT 57.864 39.130 9.94 0.43 45.45 3.41
4758 6235 3.743396 GGTGGAATTTAATGTGCGCAAAA 59.257 39.130 14.00 9.95 0.00 2.44
4811 6289 9.912634 ATGAACTGTAAGAAATTGTACAAATGG 57.087 29.630 13.23 0.00 37.43 3.16
4965 6443 8.920509 AAAAAGAATAAGTAACAAAGCACGTT 57.079 26.923 0.00 0.00 0.00 3.99
4980 6458 4.021916 AGCACGTTCTATGTTAGGTAGGT 58.978 43.478 0.00 0.00 0.00 3.08
4983 6461 6.153340 AGCACGTTCTATGTTAGGTAGGTAAA 59.847 38.462 0.00 0.00 0.00 2.01
5011 6489 4.500887 GCAGCCTACGTGATAATACCTTGA 60.501 45.833 0.00 0.00 0.00 3.02
5028 6506 5.675538 ACCTTGAAAGCATACTCAGATACC 58.324 41.667 0.00 0.00 0.00 2.73
5049 6527 1.398041 CAATGCTACGTGGACATGTGG 59.602 52.381 1.15 5.61 32.72 4.17
5060 6538 2.705658 TGGACATGTGGTCTGGGATATC 59.294 50.000 1.15 0.00 46.16 1.63
5068 6546 6.174720 TGTGGTCTGGGATATCAGTTAATC 57.825 41.667 4.83 0.00 36.25 1.75
5092 6570 1.256361 TGGCAGTGGCAGAGAGAGAG 61.256 60.000 16.56 0.00 43.71 3.20
5093 6571 0.969917 GGCAGTGGCAGAGAGAGAGA 60.970 60.000 12.58 0.00 43.71 3.10
5094 6572 0.457035 GCAGTGGCAGAGAGAGAGAG 59.543 60.000 0.00 0.00 40.72 3.20
5095 6573 1.954733 GCAGTGGCAGAGAGAGAGAGA 60.955 57.143 0.00 0.00 40.72 3.10
5096 6574 2.019249 CAGTGGCAGAGAGAGAGAGAG 58.981 57.143 0.00 0.00 0.00 3.20
5097 6575 1.915489 AGTGGCAGAGAGAGAGAGAGA 59.085 52.381 0.00 0.00 0.00 3.10
5103 6581 4.024048 GGCAGAGAGAGAGAGAGAAATACG 60.024 50.000 0.00 0.00 0.00 3.06
5107 6585 4.714632 AGAGAGAGAGAGAAATACGAGGG 58.285 47.826 0.00 0.00 0.00 4.30
5124 6602 5.021458 ACGAGGGGAGAACTAGAAATACAA 58.979 41.667 0.00 0.00 0.00 2.41
5170 6648 3.564511 CCTTGTACAAGCGTTGATTTGG 58.435 45.455 27.05 9.14 37.11 3.28
5233 6711 2.750350 CTCGGGAGCCAAAGTGGT 59.250 61.111 0.00 0.00 40.46 4.16
5235 6713 0.537371 CTCGGGAGCCAAAGTGGTTT 60.537 55.000 0.00 0.00 40.46 3.27
5236 6714 0.106419 TCGGGAGCCAAAGTGGTTTT 60.106 50.000 0.00 0.00 40.46 2.43
5237 6715 0.750249 CGGGAGCCAAAGTGGTTTTT 59.250 50.000 0.00 0.00 40.46 1.94
5281 6759 7.435784 TGTTTTTCAGGGTTCTAAAATTAACGC 59.564 33.333 0.00 0.00 38.44 4.84
5466 6949 0.391228 GCTTGGCTAGCTACTCCCTC 59.609 60.000 15.72 0.00 46.77 4.30
5467 6950 1.044611 CTTGGCTAGCTACTCCCTCC 58.955 60.000 15.72 0.00 0.00 4.30
5468 6951 0.755698 TTGGCTAGCTACTCCCTCCG 60.756 60.000 15.72 0.00 0.00 4.63
5469 6952 1.152715 GGCTAGCTACTCCCTCCGT 60.153 63.158 15.72 0.00 0.00 4.69
5471 6954 0.669619 GCTAGCTACTCCCTCCGTTC 59.330 60.000 7.70 0.00 0.00 3.95
5472 6955 1.320507 CTAGCTACTCCCTCCGTTCC 58.679 60.000 0.00 0.00 0.00 3.62
5473 6956 0.924823 TAGCTACTCCCTCCGTTCCT 59.075 55.000 0.00 0.00 0.00 3.36
5475 6958 1.287146 AGCTACTCCCTCCGTTCCTAA 59.713 52.381 0.00 0.00 0.00 2.69
5476 6959 2.105766 GCTACTCCCTCCGTTCCTAAA 58.894 52.381 0.00 0.00 0.00 1.85
5477 6960 2.699321 GCTACTCCCTCCGTTCCTAAAT 59.301 50.000 0.00 0.00 0.00 1.40
5479 6962 4.527427 GCTACTCCCTCCGTTCCTAAATAT 59.473 45.833 0.00 0.00 0.00 1.28
5480 6963 5.713861 GCTACTCCCTCCGTTCCTAAATATA 59.286 44.000 0.00 0.00 0.00 0.86
5482 6965 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
5484 6967 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
5485 6968 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
5486 6969 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
5487 6970 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
5488 6971 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
5489 6972 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
5516 6999 8.307483 AGAGATTTGAATATGGACTACATACGG 58.693 37.037 0.00 0.00 44.41 4.02
5517 7000 8.190326 AGATTTGAATATGGACTACATACGGA 57.810 34.615 0.00 0.00 44.41 4.69
5518 7001 8.816894 AGATTTGAATATGGACTACATACGGAT 58.183 33.333 0.00 0.00 44.41 4.18
5519 7002 8.777865 ATTTGAATATGGACTACATACGGATG 57.222 34.615 5.94 5.94 44.41 3.51
5521 7004 8.411991 TTGAATATGGACTACATACGGATGTA 57.588 34.615 19.32 19.32 44.77 2.29
5522 7005 8.589701 TGAATATGGACTACATACGGATGTAT 57.410 34.615 20.64 9.39 45.42 2.29
5523 7006 9.689501 TGAATATGGACTACATACGGATGTATA 57.310 33.333 20.64 11.30 45.42 1.47
5528 7011 8.728337 TGGACTACATACGGATGTATATAGAC 57.272 38.462 20.64 10.95 45.42 2.59
5529 7012 8.323567 TGGACTACATACGGATGTATATAGACA 58.676 37.037 20.64 12.12 45.42 3.41
5530 7013 9.339850 GGACTACATACGGATGTATATAGACAT 57.660 37.037 20.64 12.70 45.42 3.06
5648 7131 5.418840 TGGATCATTTTGGCTACCTTCTTTC 59.581 40.000 0.00 0.00 0.00 2.62
5815 7298 2.681778 AGCCTCGCCTGCTACTGT 60.682 61.111 0.00 0.00 37.28 3.55
5882 7365 4.777896 TCATCTCCTGTAAAGCCAGTTACT 59.222 41.667 4.70 0.00 35.41 2.24
5909 7392 3.719268 TCAGTTGTTGCACTATCCCAT 57.281 42.857 0.00 0.00 0.00 4.00
5933 7416 4.133820 CTGGTCAACCACATGTTAAGTCA 58.866 43.478 0.00 0.00 42.01 3.41
6099 7582 2.451490 TGTTTGCTTGGTTCTGGAACA 58.549 42.857 14.25 0.00 42.85 3.18
6165 7654 7.880160 TTGTCAACTCCTTAAATATGATGGG 57.120 36.000 0.00 0.00 0.00 4.00
6274 7764 7.233757 ACTCAGTTTCACACTATTACTTCCTCT 59.766 37.037 0.00 0.00 32.76 3.69
6325 7815 5.465390 GTGATTGTTTTTGGTTTTCCTAGCC 59.535 40.000 0.00 0.00 41.38 3.93
6423 7913 2.760092 TGCTAGGTCCAATTCAAATGCC 59.240 45.455 0.00 0.00 0.00 4.40
6475 7965 1.298859 GGACACAAAGGTAGCGGCAG 61.299 60.000 1.45 0.00 0.00 4.85
6544 8034 2.329379 GGACAGCGTCTTCTGTTACTG 58.671 52.381 8.26 0.00 46.40 2.74
7004 8494 5.750352 ATCAAGCCAAACTCCATGAAAAT 57.250 34.783 0.00 0.00 0.00 1.82
7100 8590 2.142292 ATCTCCGGGCCTGCAAAAGT 62.142 55.000 5.85 0.00 0.00 2.66
7514 9007 0.944386 CAAGGTAGCGCTGTTGTTGT 59.056 50.000 22.90 0.00 0.00 3.32
7526 9019 3.378427 GCTGTTGTTGTGGAAGAGAAAGT 59.622 43.478 0.00 0.00 0.00 2.66
7563 9056 7.596494 CAAACTCTGAACCACATACAATCAAT 58.404 34.615 0.00 0.00 0.00 2.57
7640 9133 5.428253 TGCTATAGAAGGAAAAATCGCTGT 58.572 37.500 3.21 0.00 0.00 4.40
7719 9212 6.769341 TGGAAATGACATCAGTAATGGATGAG 59.231 38.462 9.18 0.00 43.80 2.90
7726 9219 5.295292 ACATCAGTAATGGATGAGAAAAGCG 59.705 40.000 9.18 0.00 43.80 4.68
7728 9221 5.674525 TCAGTAATGGATGAGAAAAGCGAT 58.325 37.500 0.00 0.00 0.00 4.58
7804 9297 1.976404 AGATGACCATCGATGCTGGAT 59.024 47.619 20.25 8.32 42.48 3.41
7806 9299 1.957668 TGACCATCGATGCTGGATTG 58.042 50.000 20.25 6.94 37.22 2.67
7859 9352 5.825593 TCAACTGAAAATGGAGTAGGAGT 57.174 39.130 0.00 0.00 0.00 3.85
7894 9387 6.494835 TGAAGAGGCATGCATAGATAAGTCTA 59.505 38.462 21.36 0.00 41.03 2.59
7956 9449 0.780637 TTCCAAATGGGGTGCTACCA 59.219 50.000 0.00 2.77 41.02 3.25
7999 9492 2.380941 GTCAGGAGACTAAGGAGGGTC 58.619 57.143 0.00 0.00 41.64 4.46
8018 9511 4.258206 CCTTGTGGGTTGCAGTGT 57.742 55.556 0.00 0.00 0.00 3.55
8083 9577 5.244851 TGCATCCAATTTACTTTTGCAGGTA 59.755 36.000 0.00 0.00 34.03 3.08
8198 9701 8.566260 GCTGATTTAGAATCTTATGATGCAACT 58.434 33.333 0.00 0.00 30.44 3.16
8280 9783 2.930950 ACAAATGTCATACCCCCATCG 58.069 47.619 0.00 0.00 0.00 3.84
8317 9820 8.871629 TTGTAATTGCTAAACCCTTTCAGATA 57.128 30.769 0.00 0.00 0.00 1.98
8557 10060 2.489329 CCCTTGAATGAAACACGCTCAT 59.511 45.455 0.00 0.00 34.97 2.90
8578 10081 9.077674 GCTCATCAGATAGGTTATTATTACACG 57.922 37.037 0.00 0.00 0.00 4.49
8657 10160 1.699054 TTATGCAGATGCCCGGAGCT 61.699 55.000 0.73 0.00 44.23 4.09
8777 10297 0.804989 CTGGGGACTGAATCGTTTGC 59.195 55.000 0.00 0.00 0.00 3.68
8778 10298 0.953471 TGGGGACTGAATCGTTTGCG 60.953 55.000 0.00 0.00 39.92 4.85
8938 10462 2.568696 TGAGCTATGAAGTGAGTCGC 57.431 50.000 0.00 0.00 0.00 5.19
8966 10490 3.980646 ACTAGCGAATTGTTGTTGCAA 57.019 38.095 0.00 0.00 0.00 4.08
8968 10492 2.575694 AGCGAATTGTTGTTGCAACA 57.424 40.000 27.96 27.96 37.08 3.33
8969 10493 3.096489 AGCGAATTGTTGTTGCAACAT 57.904 38.095 31.48 17.35 38.95 2.71
8976 10500 1.270199 TGTTGTTGCAACATGGGCATC 60.270 47.619 31.48 15.79 41.58 3.91
9026 10550 9.988815 ATCATGTCTGACATAAACCTTATACTC 57.011 33.333 21.88 0.00 36.53 2.59
9027 10551 8.421784 TCATGTCTGACATAAACCTTATACTCC 58.578 37.037 21.88 0.00 36.53 3.85
9028 10552 7.120923 TGTCTGACATAAACCTTATACTCCC 57.879 40.000 6.36 0.00 0.00 4.30
9029 10553 6.901300 TGTCTGACATAAACCTTATACTCCCT 59.099 38.462 6.36 0.00 0.00 4.20
9030 10554 7.069578 TGTCTGACATAAACCTTATACTCCCTC 59.930 40.741 6.36 0.00 0.00 4.30
9031 10555 6.553852 TCTGACATAAACCTTATACTCCCTCC 59.446 42.308 0.00 0.00 0.00 4.30
9032 10556 5.303589 TGACATAAACCTTATACTCCCTCCG 59.696 44.000 0.00 0.00 0.00 4.63
9033 10557 5.214293 ACATAAACCTTATACTCCCTCCGT 58.786 41.667 0.00 0.00 0.00 4.69
9034 10558 5.664457 ACATAAACCTTATACTCCCTCCGTT 59.336 40.000 0.00 0.00 0.00 4.44
9035 10559 6.157471 ACATAAACCTTATACTCCCTCCGTTT 59.843 38.462 0.00 0.00 0.00 3.60
9036 10560 4.750021 AACCTTATACTCCCTCCGTTTC 57.250 45.455 0.00 0.00 0.00 2.78
9037 10561 3.716431 ACCTTATACTCCCTCCGTTTCA 58.284 45.455 0.00 0.00 0.00 2.69
9038 10562 4.098894 ACCTTATACTCCCTCCGTTTCAA 58.901 43.478 0.00 0.00 0.00 2.69
9039 10563 4.533311 ACCTTATACTCCCTCCGTTTCAAA 59.467 41.667 0.00 0.00 0.00 2.69
9040 10564 5.013391 ACCTTATACTCCCTCCGTTTCAAAA 59.987 40.000 0.00 0.00 0.00 2.44
9041 10565 6.120220 CCTTATACTCCCTCCGTTTCAAAAT 58.880 40.000 0.00 0.00 0.00 1.82
9042 10566 7.092757 ACCTTATACTCCCTCCGTTTCAAAATA 60.093 37.037 0.00 0.00 0.00 1.40
9043 10567 7.441458 CCTTATACTCCCTCCGTTTCAAAATAG 59.559 40.741 0.00 0.00 0.00 1.73
9044 10568 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
9045 10569 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
9046 10570 5.186198 ACTCCCTCCGTTTCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
9047 10571 5.045869 ACTCCCTCCGTTTCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
9048 10572 5.183228 TCCCTCCGTTTCAAAATAGATGAC 58.817 41.667 0.00 0.00 0.00 3.06
9049 10573 5.045869 TCCCTCCGTTTCAAAATAGATGACT 60.046 40.000 0.00 0.00 0.00 3.41
9050 10574 5.294552 CCCTCCGTTTCAAAATAGATGACTC 59.705 44.000 0.00 0.00 0.00 3.36
9051 10575 5.874810 CCTCCGTTTCAAAATAGATGACTCA 59.125 40.000 0.00 0.00 0.00 3.41
9052 10576 6.371548 CCTCCGTTTCAAAATAGATGACTCAA 59.628 38.462 0.00 0.00 0.00 3.02
9053 10577 7.129109 TCCGTTTCAAAATAGATGACTCAAC 57.871 36.000 0.00 0.00 0.00 3.18
9054 10578 6.934645 TCCGTTTCAAAATAGATGACTCAACT 59.065 34.615 0.00 0.00 0.00 3.16
9055 10579 7.444183 TCCGTTTCAAAATAGATGACTCAACTT 59.556 33.333 0.00 0.00 0.00 2.66
9056 10580 8.076178 CCGTTTCAAAATAGATGACTCAACTTT 58.924 33.333 0.00 0.00 0.00 2.66
9057 10581 8.895845 CGTTTCAAAATAGATGACTCAACTTTG 58.104 33.333 0.00 0.00 0.00 2.77
9058 10582 9.736023 GTTTCAAAATAGATGACTCAACTTTGT 57.264 29.630 0.00 0.00 0.00 2.83
9061 10585 9.778741 TCAAAATAGATGACTCAACTTTGTACT 57.221 29.630 0.00 0.00 0.00 2.73
9081 10605 9.909644 TTGTACTAAAGTTAGTAGAAAGCTGAG 57.090 33.333 14.92 0.00 44.40 3.35
9082 10606 9.075678 TGTACTAAAGTTAGTAGAAAGCTGAGT 57.924 33.333 10.51 0.00 44.40 3.41
9083 10607 9.558648 GTACTAAAGTTAGTAGAAAGCTGAGTC 57.441 37.037 10.51 0.00 44.40 3.36
9084 10608 8.179509 ACTAAAGTTAGTAGAAAGCTGAGTCA 57.820 34.615 1.81 0.00 41.92 3.41
9085 10609 8.808092 ACTAAAGTTAGTAGAAAGCTGAGTCAT 58.192 33.333 1.81 0.00 41.92 3.06
9086 10610 9.296400 CTAAAGTTAGTAGAAAGCTGAGTCATC 57.704 37.037 0.00 0.00 0.00 2.92
9087 10611 7.475137 AAGTTAGTAGAAAGCTGAGTCATCT 57.525 36.000 0.00 0.00 0.00 2.90
9088 10612 8.582657 AAGTTAGTAGAAAGCTGAGTCATCTA 57.417 34.615 0.00 0.00 0.00 1.98
9089 10613 8.760980 AGTTAGTAGAAAGCTGAGTCATCTAT 57.239 34.615 0.00 0.00 0.00 1.98
9090 10614 9.196139 AGTTAGTAGAAAGCTGAGTCATCTATT 57.804 33.333 0.00 0.04 0.00 1.73
9091 10615 9.810545 GTTAGTAGAAAGCTGAGTCATCTATTT 57.189 33.333 0.00 0.00 0.00 1.40
9093 10617 8.715191 AGTAGAAAGCTGAGTCATCTATTTTG 57.285 34.615 0.00 0.00 0.00 2.44
9094 10618 6.998968 AGAAAGCTGAGTCATCTATTTTGG 57.001 37.500 0.00 0.00 0.00 3.28
9095 10619 6.715280 AGAAAGCTGAGTCATCTATTTTGGA 58.285 36.000 0.00 0.00 0.00 3.53
9096 10620 7.170965 AGAAAGCTGAGTCATCTATTTTGGAA 58.829 34.615 0.00 0.00 0.00 3.53
9097 10621 6.749923 AAGCTGAGTCATCTATTTTGGAAC 57.250 37.500 0.00 0.00 0.00 3.62
9098 10622 4.872691 AGCTGAGTCATCTATTTTGGAACG 59.127 41.667 0.00 0.00 0.00 3.95
9099 10623 4.034510 GCTGAGTCATCTATTTTGGAACGG 59.965 45.833 0.00 0.00 0.00 4.44
9100 10624 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
9101 10625 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
9102 10626 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
9103 10627 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
9104 10628 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
9105 10629 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
9184 10711 8.642432 AAGGCTAAGAAGCTTTTTGATTTAGTT 58.358 29.630 12.27 0.00 44.97 2.24
9234 10761 1.519498 GTATGGGTAGGGGAAGGCTT 58.481 55.000 0.00 0.00 0.00 4.35
9235 10762 1.850998 GTATGGGTAGGGGAAGGCTTT 59.149 52.381 0.00 0.00 0.00 3.51
9315 10850 1.997606 GACGTACACATAGGTTGCCAC 59.002 52.381 0.00 0.00 29.55 5.01
9377 10912 1.886861 AAACACAGCACGATCGTCGC 61.887 55.000 25.29 25.29 45.12 5.19
9378 10913 2.804931 CACAGCACGATCGTCGCA 60.805 61.111 30.35 0.00 45.12 5.10
9574 11114 4.729918 CAGCTTCAGCCCGCCCTT 62.730 66.667 0.00 0.00 43.38 3.95
9630 11170 2.110967 CCTTCGTCGTCGAGGCCTA 61.111 63.158 4.42 0.00 46.81 3.93
9631 11171 1.062206 CTTCGTCGTCGAGGCCTAC 59.938 63.158 4.42 0.00 46.81 3.18
9632 11172 2.320339 CTTCGTCGTCGAGGCCTACC 62.320 65.000 4.42 0.00 46.81 3.18
9633 11173 3.885521 CGTCGTCGAGGCCTACCC 61.886 72.222 4.42 0.00 39.71 3.69
9635 11175 1.153086 GTCGTCGAGGCCTACCCTA 60.153 63.158 4.42 0.00 46.60 3.53
9746 11289 0.389948 ACGCAAACCCTGAGATCGAC 60.390 55.000 0.00 0.00 0.00 4.20
9784 11327 9.906660 TCGTTTAACTGAAATATGCTGATTTTT 57.093 25.926 0.00 0.00 0.00 1.94
9785 11328 9.941991 CGTTTAACTGAAATATGCTGATTTTTG 57.058 29.630 0.00 0.00 0.00 2.44
9790 11333 8.976986 ACTGAAATATGCTGATTTTTGAAGAC 57.023 30.769 0.00 0.00 0.00 3.01
9791 11334 7.752239 ACTGAAATATGCTGATTTTTGAAGACG 59.248 33.333 0.00 0.00 0.00 4.18
9792 11335 7.592938 TGAAATATGCTGATTTTTGAAGACGT 58.407 30.769 0.00 0.00 0.00 4.34
9793 11336 7.538334 TGAAATATGCTGATTTTTGAAGACGTG 59.462 33.333 0.00 0.00 0.00 4.49
9794 11337 4.836125 ATGCTGATTTTTGAAGACGTGT 57.164 36.364 0.00 0.00 0.00 4.49
9795 11338 3.951306 TGCTGATTTTTGAAGACGTGTG 58.049 40.909 0.00 0.00 0.00 3.82
9796 11339 3.243035 TGCTGATTTTTGAAGACGTGTGG 60.243 43.478 0.00 0.00 0.00 4.17
9797 11340 3.853307 GCTGATTTTTGAAGACGTGTGGG 60.853 47.826 0.00 0.00 0.00 4.61
9798 11341 3.546724 TGATTTTTGAAGACGTGTGGGA 58.453 40.909 0.00 0.00 0.00 4.37
9799 11342 4.141287 TGATTTTTGAAGACGTGTGGGAT 58.859 39.130 0.00 0.00 0.00 3.85
9800 11343 3.980646 TTTTTGAAGACGTGTGGGATG 57.019 42.857 0.00 0.00 0.00 3.51
9801 11344 1.890876 TTTGAAGACGTGTGGGATGG 58.109 50.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.530633 GTACCTTGATGAAGAAATAGTATCGTT 57.469 33.333 0.00 0.00 0.00 3.85
1 2 8.142551 GGTACCTTGATGAAGAAATAGTATCGT 58.857 37.037 4.06 0.00 0.00 3.73
2 3 8.141909 TGGTACCTTGATGAAGAAATAGTATCG 58.858 37.037 14.36 0.00 0.00 2.92
47 48 9.180678 CGTTTGTTTAGCATCAAGTCTTTATTT 57.819 29.630 0.00 0.00 0.00 1.40
48 49 8.564574 TCGTTTGTTTAGCATCAAGTCTTTATT 58.435 29.630 0.00 0.00 0.00 1.40
49 50 8.094798 TCGTTTGTTTAGCATCAAGTCTTTAT 57.905 30.769 0.00 0.00 0.00 1.40
50 51 7.485418 TCGTTTGTTTAGCATCAAGTCTTTA 57.515 32.000 0.00 0.00 0.00 1.85
51 52 6.371809 TCGTTTGTTTAGCATCAAGTCTTT 57.628 33.333 0.00 0.00 0.00 2.52
52 53 6.371809 TTCGTTTGTTTAGCATCAAGTCTT 57.628 33.333 0.00 0.00 0.00 3.01
53 54 6.260050 TCTTTCGTTTGTTTAGCATCAAGTCT 59.740 34.615 0.00 0.00 0.00 3.24
54 55 6.357240 GTCTTTCGTTTGTTTAGCATCAAGTC 59.643 38.462 0.00 0.00 0.00 3.01
55 56 6.038271 AGTCTTTCGTTTGTTTAGCATCAAGT 59.962 34.615 0.00 0.00 0.00 3.16
56 57 6.430451 AGTCTTTCGTTTGTTTAGCATCAAG 58.570 36.000 0.00 0.00 0.00 3.02
57 58 6.371809 AGTCTTTCGTTTGTTTAGCATCAA 57.628 33.333 0.00 0.00 0.00 2.57
58 59 6.037720 TCAAGTCTTTCGTTTGTTTAGCATCA 59.962 34.615 0.00 0.00 0.00 3.07
59 60 6.427150 TCAAGTCTTTCGTTTGTTTAGCATC 58.573 36.000 0.00 0.00 0.00 3.91
60 61 6.371809 TCAAGTCTTTCGTTTGTTTAGCAT 57.628 33.333 0.00 0.00 0.00 3.79
61 62 5.804692 TCAAGTCTTTCGTTTGTTTAGCA 57.195 34.783 0.00 0.00 0.00 3.49
62 63 5.115622 GCATCAAGTCTTTCGTTTGTTTAGC 59.884 40.000 0.00 0.00 0.00 3.09
63 64 6.430451 AGCATCAAGTCTTTCGTTTGTTTAG 58.570 36.000 0.00 0.00 0.00 1.85
64 65 6.371809 AGCATCAAGTCTTTCGTTTGTTTA 57.628 33.333 0.00 0.00 0.00 2.01
65 66 5.248870 AGCATCAAGTCTTTCGTTTGTTT 57.751 34.783 0.00 0.00 0.00 2.83
66 67 4.900635 AGCATCAAGTCTTTCGTTTGTT 57.099 36.364 0.00 0.00 0.00 2.83
67 68 6.183360 TGTTTAGCATCAAGTCTTTCGTTTGT 60.183 34.615 0.00 0.00 0.00 2.83
68 69 6.198687 TGTTTAGCATCAAGTCTTTCGTTTG 58.801 36.000 0.00 0.00 0.00 2.93
69 70 6.371809 TGTTTAGCATCAAGTCTTTCGTTT 57.628 33.333 0.00 0.00 0.00 3.60
70 71 6.371809 TTGTTTAGCATCAAGTCTTTCGTT 57.628 33.333 0.00 0.00 0.00 3.85
71 72 6.199393 GTTTGTTTAGCATCAAGTCTTTCGT 58.801 36.000 0.00 0.00 0.00 3.85
72 73 5.336990 CGTTTGTTTAGCATCAAGTCTTTCG 59.663 40.000 0.00 0.00 0.00 3.46
73 74 6.427150 TCGTTTGTTTAGCATCAAGTCTTTC 58.573 36.000 0.00 0.00 0.00 2.62
74 75 6.371809 TCGTTTGTTTAGCATCAAGTCTTT 57.628 33.333 0.00 0.00 0.00 2.52
75 76 6.371809 TTCGTTTGTTTAGCATCAAGTCTT 57.628 33.333 0.00 0.00 0.00 3.01
76 77 6.371809 TTTCGTTTGTTTAGCATCAAGTCT 57.628 33.333 0.00 0.00 0.00 3.24
77 78 5.115622 GCTTTCGTTTGTTTAGCATCAAGTC 59.884 40.000 0.00 0.00 0.00 3.01
78 79 4.976116 GCTTTCGTTTGTTTAGCATCAAGT 59.024 37.500 0.00 0.00 0.00 3.16
79 80 4.382754 GGCTTTCGTTTGTTTAGCATCAAG 59.617 41.667 0.00 0.00 33.60 3.02
80 81 4.037446 AGGCTTTCGTTTGTTTAGCATCAA 59.963 37.500 0.00 0.00 33.60 2.57
81 82 3.568007 AGGCTTTCGTTTGTTTAGCATCA 59.432 39.130 0.00 0.00 33.60 3.07
82 83 4.083271 AGAGGCTTTCGTTTGTTTAGCATC 60.083 41.667 0.00 0.00 41.46 3.91
83 84 3.821033 AGAGGCTTTCGTTTGTTTAGCAT 59.179 39.130 0.00 0.00 33.60 3.79
84 85 3.211045 AGAGGCTTTCGTTTGTTTAGCA 58.789 40.909 0.00 0.00 33.60 3.49
85 86 3.898517 AGAGGCTTTCGTTTGTTTAGC 57.101 42.857 0.00 0.00 0.00 3.09
86 87 6.541111 AACTAGAGGCTTTCGTTTGTTTAG 57.459 37.500 0.00 0.00 0.00 1.85
87 88 6.539464 TCAAACTAGAGGCTTTCGTTTGTTTA 59.461 34.615 24.66 10.99 42.82 2.01
88 89 5.355910 TCAAACTAGAGGCTTTCGTTTGTTT 59.644 36.000 24.66 11.86 42.82 2.83
89 90 4.879545 TCAAACTAGAGGCTTTCGTTTGTT 59.120 37.500 24.66 7.68 42.82 2.83
90 91 4.272748 GTCAAACTAGAGGCTTTCGTTTGT 59.727 41.667 24.66 0.00 42.82 2.83
91 92 4.272504 TGTCAAACTAGAGGCTTTCGTTTG 59.727 41.667 21.78 21.78 43.33 2.93
92 93 4.448210 TGTCAAACTAGAGGCTTTCGTTT 58.552 39.130 0.00 2.36 0.00 3.60
93 94 4.067972 TGTCAAACTAGAGGCTTTCGTT 57.932 40.909 0.00 0.00 0.00 3.85
94 95 3.746045 TGTCAAACTAGAGGCTTTCGT 57.254 42.857 0.00 0.00 0.00 3.85
95 96 3.433615 CCTTGTCAAACTAGAGGCTTTCG 59.566 47.826 0.00 0.00 0.00 3.46
865 866 3.545574 TCGAGCACCACACCAGCA 61.546 61.111 0.00 0.00 0.00 4.41
983 984 0.177141 CGCTTCAATTAGACGGGGGA 59.823 55.000 0.00 0.00 0.00 4.81
1496 1498 2.618053 CAGTAAACTGGTAGGAAGCGG 58.382 52.381 2.01 0.00 40.20 5.52
1528 1530 1.730501 TCCGGTCACTAGTACGACTG 58.269 55.000 13.00 13.00 38.10 3.51
1552 1554 1.255882 TCGGCATCACCAAATTGCTT 58.744 45.000 0.00 0.00 39.03 3.91
1568 1570 1.202405 TCACATCCACATCGACATCGG 60.202 52.381 0.73 0.00 40.29 4.18
1569 1571 2.122564 CTCACATCCACATCGACATCG 58.877 52.381 0.00 0.00 41.45 3.84
1570 1572 2.477825 CCTCACATCCACATCGACATC 58.522 52.381 0.00 0.00 0.00 3.06
1571 1573 1.473965 GCCTCACATCCACATCGACAT 60.474 52.381 0.00 0.00 0.00 3.06
1572 1574 0.108186 GCCTCACATCCACATCGACA 60.108 55.000 0.00 0.00 0.00 4.35
1573 1575 0.176680 AGCCTCACATCCACATCGAC 59.823 55.000 0.00 0.00 0.00 4.20
1581 1583 2.894387 GCGAGCAGCCTCACATCC 60.894 66.667 0.00 0.00 40.81 3.51
1647 1649 3.117926 AGCAGCATCCACATGGTAATACA 60.118 43.478 0.00 0.00 38.76 2.29
1700 1702 3.595021 ACTAAAGTACAACAGGAGGGGT 58.405 45.455 0.00 0.00 0.00 4.95
1703 1705 5.130292 TCGAACTAAAGTACAACAGGAGG 57.870 43.478 0.00 0.00 0.00 4.30
1919 1922 6.028146 TGATGCTTCAAACATGTTATGCTT 57.972 33.333 12.39 9.05 0.00 3.91
2068 2072 8.258007 CCTACAGTGAAGTTGTGATCCTAAATA 58.742 37.037 0.00 0.00 0.00 1.40
2090 2094 7.650903 CCAAATTATCTTACCTACACGTCCTAC 59.349 40.741 0.00 0.00 0.00 3.18
2091 2095 7.201938 CCCAAATTATCTTACCTACACGTCCTA 60.202 40.741 0.00 0.00 0.00 2.94
2092 2096 6.407752 CCCAAATTATCTTACCTACACGTCCT 60.408 42.308 0.00 0.00 0.00 3.85
2093 2097 5.756833 CCCAAATTATCTTACCTACACGTCC 59.243 44.000 0.00 0.00 0.00 4.79
2094 2098 6.576185 TCCCAAATTATCTTACCTACACGTC 58.424 40.000 0.00 0.00 0.00 4.34
2095 2099 6.549433 TCCCAAATTATCTTACCTACACGT 57.451 37.500 0.00 0.00 0.00 4.49
2096 2100 8.145767 TGTATCCCAAATTATCTTACCTACACG 58.854 37.037 0.00 0.00 0.00 4.49
2140 2144 7.026247 TCCCCAAGTCTATCTATCTCTCTCTA 58.974 42.308 0.00 0.00 0.00 2.43
2150 2172 4.232122 TCTGACCTTCCCCAAGTCTATCTA 59.768 45.833 0.00 0.00 0.00 1.98
2180 2219 5.945784 TCAGTCCCTATTTCCATTTCTTGTG 59.054 40.000 0.00 0.00 0.00 3.33
2359 2398 2.262915 GACCAGGTGAGTGAGGCG 59.737 66.667 0.00 0.00 0.00 5.52
2369 2408 0.900647 CTGACGAAGGAGGACCAGGT 60.901 60.000 0.00 0.00 38.94 4.00
2377 2416 3.608241 GCGATGATACTCTGACGAAGGAG 60.608 52.174 0.00 0.00 35.86 3.69
2445 2484 2.825836 GAGCAATGACGGGCCAGG 60.826 66.667 8.08 0.00 0.00 4.45
2448 2487 1.372087 CTCTTGAGCAATGACGGGCC 61.372 60.000 0.00 0.00 0.00 5.80
2450 2489 1.699656 CGCTCTTGAGCAATGACGGG 61.700 60.000 20.59 0.33 34.41 5.28
2808 2847 3.829728 AACGGCTAGATATCCCTACCT 57.170 47.619 0.00 0.00 0.00 3.08
2867 2906 5.079689 TCAGTTTGTAGATGTCGCCATAA 57.920 39.130 0.00 0.00 0.00 1.90
2873 2912 4.330074 GGACCAATCAGTTTGTAGATGTCG 59.670 45.833 0.00 0.00 33.15 4.35
2874 2913 5.245531 TGGACCAATCAGTTTGTAGATGTC 58.754 41.667 0.00 0.00 33.15 3.06
2923 2962 3.810310 ATCCGGACAGAGAGAAATCAC 57.190 47.619 6.12 0.00 0.00 3.06
2931 2970 1.964223 GCTGGAATATCCGGACAGAGA 59.036 52.381 20.05 0.00 45.95 3.10
2932 2971 1.688735 TGCTGGAATATCCGGACAGAG 59.311 52.381 20.05 6.76 45.95 3.35
3013 3649 3.428045 CGGGAGCCAAAAATCTGATTCAC 60.428 47.826 2.92 0.00 0.00 3.18
3127 3763 9.263446 TCCCATACATATCCCTTGTATTACTAC 57.737 37.037 0.00 0.00 38.02 2.73
3150 3786 0.594796 CTGCAACACGCTGTTTTCCC 60.595 55.000 0.00 0.00 38.77 3.97
3166 3802 1.956170 CACGTCCTGGACACACTGC 60.956 63.158 25.42 0.00 32.09 4.40
3191 3827 5.997129 TCAGCCGCTGATGAAATTAATATCA 59.003 36.000 19.36 0.00 35.39 2.15
3212 3848 1.733416 CTCGTGTACGCGCACATCAG 61.733 60.000 23.52 10.51 39.19 2.90
3243 3879 6.098838 ACATCAGGATCAAAGTGTCATAGCTA 59.901 38.462 0.00 0.00 0.00 3.32
3262 4075 6.806249 ACAATTTATTTACGTGCCAACATCAG 59.194 34.615 0.00 0.00 0.00 2.90
3286 4099 4.577834 TGCAAGGTTAAAAAGCCAGTAC 57.422 40.909 0.00 0.00 0.00 2.73
3323 4136 6.811253 TTGTACGCATCCATTAGAACTTTT 57.189 33.333 0.00 0.00 0.00 2.27
3368 4181 6.995511 TTTGCGAGGTTAAACATAATAGCT 57.004 33.333 0.00 0.00 0.00 3.32
3435 4248 6.373216 CCTTTTACAATTCGACTGGTGGATTA 59.627 38.462 0.00 0.00 0.00 1.75
3448 4261 7.867403 TGAATCAGAACAAGCCTTTTACAATTC 59.133 33.333 0.00 0.00 0.00 2.17
3456 4269 6.870439 GCTTAAATGAATCAGAACAAGCCTTT 59.130 34.615 9.22 0.00 32.88 3.11
3516 4329 7.707624 AGAAAAGAAATGCAATACATCCTCA 57.292 32.000 0.00 0.00 38.34 3.86
3517 4330 8.677300 TGTAGAAAAGAAATGCAATACATCCTC 58.323 33.333 0.00 0.00 38.34 3.71
3518 4331 8.579850 TGTAGAAAAGAAATGCAATACATCCT 57.420 30.769 0.00 0.00 38.34 3.24
3519 4332 9.076596 GTTGTAGAAAAGAAATGCAATACATCC 57.923 33.333 0.00 0.00 38.34 3.51
3520 4333 9.624697 TGTTGTAGAAAAGAAATGCAATACATC 57.375 29.630 0.00 0.00 38.34 3.06
3521 4334 9.979578 TTGTTGTAGAAAAGAAATGCAATACAT 57.020 25.926 0.00 0.00 42.30 2.29
3522 4335 9.462174 CTTGTTGTAGAAAAGAAATGCAATACA 57.538 29.630 0.00 0.00 0.00 2.29
3523 4336 9.677567 TCTTGTTGTAGAAAAGAAATGCAATAC 57.322 29.630 0.00 0.00 0.00 1.89
3525 4338 9.598517 TTTCTTGTTGTAGAAAAGAAATGCAAT 57.401 25.926 13.58 0.00 42.19 3.56
3526 4339 8.994429 TTTCTTGTTGTAGAAAAGAAATGCAA 57.006 26.923 13.58 0.00 42.19 4.08
3527 4340 7.222611 GCTTTCTTGTTGTAGAAAAGAAATGCA 59.777 33.333 20.20 0.00 44.55 3.96
3528 4341 7.306807 GGCTTTCTTGTTGTAGAAAAGAAATGC 60.307 37.037 15.93 17.65 44.55 3.56
3529 4342 7.922811 AGGCTTTCTTGTTGTAGAAAAGAAATG 59.077 33.333 15.93 12.92 44.55 2.32
3530 4343 8.011844 AGGCTTTCTTGTTGTAGAAAAGAAAT 57.988 30.769 15.93 6.25 44.55 2.17
3531 4344 7.404671 AGGCTTTCTTGTTGTAGAAAAGAAA 57.595 32.000 15.30 15.30 43.86 2.52
3532 4345 7.404671 AAGGCTTTCTTGTTGTAGAAAAGAA 57.595 32.000 0.00 6.13 42.01 2.52
3533 4346 7.122055 TGAAAGGCTTTCTTGTTGTAGAAAAGA 59.878 33.333 33.01 10.63 42.01 2.52
3534 4347 7.257722 TGAAAGGCTTTCTTGTTGTAGAAAAG 58.742 34.615 33.01 0.00 42.01 2.27
3535 4348 7.164230 TGAAAGGCTTTCTTGTTGTAGAAAA 57.836 32.000 33.01 11.59 42.01 2.29
3536 4349 6.767524 TGAAAGGCTTTCTTGTTGTAGAAA 57.232 33.333 33.01 11.77 40.76 2.52
3537 4350 6.767524 TTGAAAGGCTTTCTTGTTGTAGAA 57.232 33.333 33.01 17.33 40.32 2.10
3538 4351 6.016276 GGATTGAAAGGCTTTCTTGTTGTAGA 60.016 38.462 33.01 12.89 40.32 2.59
3539 4352 6.152379 GGATTGAAAGGCTTTCTTGTTGTAG 58.848 40.000 33.01 0.00 40.32 2.74
3703 4516 6.068853 GGGATGGGATAATTGGGAATAGATGA 60.069 42.308 0.00 0.00 0.00 2.92
3712 4525 3.565617 AATGGGGATGGGATAATTGGG 57.434 47.619 0.00 0.00 0.00 4.12
3788 4607 1.959710 TTTTTATGGGGAAAGGGGGC 58.040 50.000 0.00 0.00 0.00 5.80
3849 4672 1.650242 TTCCTCAGCCACCACCCAAA 61.650 55.000 0.00 0.00 0.00 3.28
3850 4673 2.067932 CTTCCTCAGCCACCACCCAA 62.068 60.000 0.00 0.00 0.00 4.12
3856 4679 2.045536 CTGCCTTCCTCAGCCACC 60.046 66.667 0.00 0.00 0.00 4.61
3893 5343 5.313712 CACTAGGTCCAAAGGTAACACATT 58.686 41.667 0.00 0.00 41.41 2.71
4049 5499 1.070175 CACAACGCGGTCAAACCTAAG 60.070 52.381 12.47 0.00 35.66 2.18
4055 5505 5.921976 CCTATATATACACAACGCGGTCAAA 59.078 40.000 12.47 0.00 0.00 2.69
4064 5514 9.098355 CCATGTACATGCCTATATATACACAAC 57.902 37.037 27.27 0.00 37.49 3.32
4083 5533 6.613755 AAATATAACGCTTGGACCATGTAC 57.386 37.500 9.01 0.00 0.00 2.90
4097 5547 7.897153 GGTAACCCGCTTTTTAAATATAACG 57.103 36.000 0.00 0.00 0.00 3.18
4130 5580 3.175710 CCCCCTTCCCCATACCCG 61.176 72.222 0.00 0.00 0.00 5.28
4149 5599 2.829592 GATGGGGATGGGGACGAC 59.170 66.667 0.00 0.00 0.00 4.34
4151 5601 1.192146 ATACGATGGGGATGGGGACG 61.192 60.000 0.00 0.00 0.00 4.79
4170 5620 6.449041 ACCAAACTAGTTTATTCCCCATAGGA 59.551 38.462 20.15 0.00 45.68 2.94
4216 5666 0.608130 GGGGTGAGGATTGGCAAAAC 59.392 55.000 3.01 0.00 0.00 2.43
4229 5679 4.601857 GGGATTTCATCTATTAGGGGGTGA 59.398 45.833 0.00 0.00 0.00 4.02
4295 5745 2.195922 GTGTGTCGTACGTGGAAAGTT 58.804 47.619 16.05 0.00 0.00 2.66
4322 5772 4.431416 TCACCAAAGAACTAGCCAAGAA 57.569 40.909 0.00 0.00 0.00 2.52
4481 5931 2.838693 GAGAGGCCGGGGTAGACC 60.839 72.222 2.18 0.00 39.11 3.85
4581 6031 5.416952 AACATCATCTGAGATGGTTTGGTTC 59.583 40.000 21.27 0.00 43.13 3.62
4684 6134 4.081697 GTGTCCCAATATTTTTGGTCAGGG 60.082 45.833 5.34 0.00 37.88 4.45
4718 6195 3.191371 CCACCCAAAGCAATACTGACTTC 59.809 47.826 0.00 0.00 0.00 3.01
4726 6203 7.102346 CACATTAAATTCCACCCAAAGCAATA 58.898 34.615 0.00 0.00 0.00 1.90
4965 6443 7.307550 TGCCCTATTTACCTACCTAACATAGA 58.692 38.462 0.00 0.00 0.00 1.98
4980 6458 2.390696 TCACGTAGGCTGCCCTATTTA 58.609 47.619 16.57 0.00 45.22 1.40
4983 6461 2.304221 TATCACGTAGGCTGCCCTAT 57.696 50.000 16.57 0.00 45.22 2.57
5011 6489 4.823989 GCATTGGGTATCTGAGTATGCTTT 59.176 41.667 0.00 0.00 35.32 3.51
5028 6506 1.398041 CACATGTCCACGTAGCATTGG 59.602 52.381 0.00 0.00 0.00 3.16
5049 6527 4.246458 GGCGATTAACTGATATCCCAGAC 58.754 47.826 0.00 0.00 37.59 3.51
5060 6538 0.392998 ACTGCCAGGGCGATTAACTG 60.393 55.000 5.74 0.00 45.51 3.16
5092 6570 3.955551 AGTTCTCCCCTCGTATTTCTCTC 59.044 47.826 0.00 0.00 0.00 3.20
5093 6571 3.983821 AGTTCTCCCCTCGTATTTCTCT 58.016 45.455 0.00 0.00 0.00 3.10
5094 6572 5.131784 TCTAGTTCTCCCCTCGTATTTCTC 58.868 45.833 0.00 0.00 0.00 2.87
5095 6573 5.126699 TCTAGTTCTCCCCTCGTATTTCT 57.873 43.478 0.00 0.00 0.00 2.52
5096 6574 5.848833 TTCTAGTTCTCCCCTCGTATTTC 57.151 43.478 0.00 0.00 0.00 2.17
5097 6575 6.809976 ATTTCTAGTTCTCCCCTCGTATTT 57.190 37.500 0.00 0.00 0.00 1.40
5103 6581 8.871125 TGATATTGTATTTCTAGTTCTCCCCTC 58.129 37.037 0.00 0.00 0.00 4.30
5124 6602 9.129532 GGCCTAGTACTAAACCGTATATGATAT 57.870 37.037 3.76 0.00 0.00 1.63
5170 6648 2.235845 TCTGCTGCTATGTGAGATGC 57.764 50.000 0.00 0.00 0.00 3.91
5281 6759 1.867233 CAACGAGACCAAAGTCACAGG 59.133 52.381 0.00 0.00 46.15 4.00
5460 6943 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
5462 6945 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
5463 6946 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
5490 6973 8.307483 CCGTATGTAGTCCATATTCAAATCTCT 58.693 37.037 0.00 0.00 38.29 3.10
5491 6974 8.304596 TCCGTATGTAGTCCATATTCAAATCTC 58.695 37.037 0.00 0.00 38.29 2.75
5492 6975 8.190326 TCCGTATGTAGTCCATATTCAAATCT 57.810 34.615 0.00 0.00 38.29 2.40
5493 6976 8.873830 CATCCGTATGTAGTCCATATTCAAATC 58.126 37.037 0.00 0.00 38.29 2.17
5494 6977 8.375506 ACATCCGTATGTAGTCCATATTCAAAT 58.624 33.333 0.00 0.00 44.66 2.32
5495 6978 7.732025 ACATCCGTATGTAGTCCATATTCAAA 58.268 34.615 0.00 0.00 44.66 2.69
5496 6979 7.297936 ACATCCGTATGTAGTCCATATTCAA 57.702 36.000 0.00 0.00 44.66 2.69
5497 6980 6.911250 ACATCCGTATGTAGTCCATATTCA 57.089 37.500 0.00 0.00 44.66 2.57
5543 7026 8.678199 GCAGCTAGGAGTAAAATGAATAAAACT 58.322 33.333 0.00 0.00 0.00 2.66
5544 7027 8.678199 AGCAGCTAGGAGTAAAATGAATAAAAC 58.322 33.333 0.00 0.00 0.00 2.43
5545 7028 8.677300 CAGCAGCTAGGAGTAAAATGAATAAAA 58.323 33.333 0.00 0.00 0.00 1.52
5546 7029 8.046708 TCAGCAGCTAGGAGTAAAATGAATAAA 58.953 33.333 0.00 0.00 0.00 1.40
5547 7030 7.564793 TCAGCAGCTAGGAGTAAAATGAATAA 58.435 34.615 0.00 0.00 0.00 1.40
5548 7031 7.124573 TCAGCAGCTAGGAGTAAAATGAATA 57.875 36.000 0.00 0.00 0.00 1.75
5549 7032 5.994250 TCAGCAGCTAGGAGTAAAATGAAT 58.006 37.500 0.00 0.00 0.00 2.57
5550 7033 5.420725 TCAGCAGCTAGGAGTAAAATGAA 57.579 39.130 0.00 0.00 0.00 2.57
5551 7034 5.420725 TTCAGCAGCTAGGAGTAAAATGA 57.579 39.130 0.00 0.00 0.00 2.57
5552 7035 6.317140 TGAATTCAGCAGCTAGGAGTAAAATG 59.683 38.462 3.38 0.00 0.00 2.32
5553 7036 6.418101 TGAATTCAGCAGCTAGGAGTAAAAT 58.582 36.000 3.38 0.00 0.00 1.82
5554 7037 5.804639 TGAATTCAGCAGCTAGGAGTAAAA 58.195 37.500 3.38 0.00 0.00 1.52
5555 7038 5.420725 TGAATTCAGCAGCTAGGAGTAAA 57.579 39.130 3.38 0.00 0.00 2.01
5556 7039 5.620738 ATGAATTCAGCAGCTAGGAGTAA 57.379 39.130 14.54 0.00 0.00 2.24
5557 7040 5.620738 AATGAATTCAGCAGCTAGGAGTA 57.379 39.130 14.54 0.00 0.00 2.59
5558 7041 4.500499 AATGAATTCAGCAGCTAGGAGT 57.500 40.909 14.54 0.00 0.00 3.85
5559 7042 4.880120 TCAAATGAATTCAGCAGCTAGGAG 59.120 41.667 14.54 0.00 0.00 3.69
5648 7131 8.577296 TCCTTGACTTCTTCCATCTATATAACG 58.423 37.037 0.00 0.00 0.00 3.18
5815 7298 4.399483 ACAGAGGTAGAAGTTACTGGGA 57.601 45.455 0.00 0.00 0.00 4.37
5882 7365 5.414454 GGATAGTGCAACAACTGAATGGTTA 59.586 40.000 0.00 0.00 41.43 2.85
5933 7416 5.584551 AAGGACCATTAACACCTCTTTCT 57.415 39.130 0.00 0.00 31.89 2.52
6069 7552 2.692557 ACCAAGCAAACATGTTACAGCA 59.307 40.909 23.81 0.00 0.00 4.41
6099 7582 5.927281 ATCATAGGCAAAAGCAAGACATT 57.073 34.783 0.00 0.00 0.00 2.71
6165 7654 7.493367 AGCTAGACAGTTTCAGTTATCCATAC 58.507 38.462 0.00 0.00 0.00 2.39
6217 7707 5.050023 GCACCTTTAGGAATAATTCTCGAGC 60.050 44.000 7.81 0.00 38.94 5.03
6325 7815 4.853924 ACACAGCCAAATTAGTTTCTGG 57.146 40.909 4.97 0.00 0.00 3.86
6423 7913 0.647410 CCTGATTGTTACTCGCAGCG 59.353 55.000 9.06 9.06 0.00 5.18
6475 7965 2.032290 GGTTTACGGTCACAGCTTGAAC 60.032 50.000 4.44 4.44 38.76 3.18
6775 8265 4.103785 ACAATGCCAGTCAGCTATAGGAAT 59.896 41.667 1.04 0.00 0.00 3.01
6855 8345 6.117911 TGTGATGTTACAACAGTTCTTGTG 57.882 37.500 0.00 0.00 43.04 3.33
7100 8590 7.779798 AGGAGGTTTCAGCATTATTAGCATTTA 59.220 33.333 0.00 0.00 0.00 1.40
7514 9007 3.038280 TCAGTGTGGACTTTCTCTTCCA 58.962 45.455 0.00 0.00 39.72 3.53
7526 9019 2.170397 TCAGAGTTTGCTTCAGTGTGGA 59.830 45.455 0.00 0.00 0.00 4.02
7563 9056 4.339530 GTGCTGGTAGTCATCTCTACATCA 59.660 45.833 6.27 0.00 41.20 3.07
7594 9087 2.162681 GTTGCTGCTTTGACCTATGGT 58.837 47.619 0.00 0.00 39.44 3.55
7623 9116 4.821805 TCTTCAACAGCGATTTTTCCTTCT 59.178 37.500 0.00 0.00 0.00 2.85
7628 9121 9.214953 CAGTATTATCTTCAACAGCGATTTTTC 57.785 33.333 0.00 0.00 0.00 2.29
7640 9133 5.684030 GCCCGAGTTCCAGTATTATCTTCAA 60.684 44.000 0.00 0.00 0.00 2.69
7719 9212 5.938322 TCTTCAATACCAACATCGCTTTTC 58.062 37.500 0.00 0.00 0.00 2.29
7726 9219 5.410924 GGGCTTTTCTTCAATACCAACATC 58.589 41.667 0.00 0.00 0.00 3.06
7728 9221 3.576550 GGGGCTTTTCTTCAATACCAACA 59.423 43.478 0.00 0.00 0.00 3.33
7804 9297 2.618241 GTTGTGTGTGATCTGCTTCCAA 59.382 45.455 0.00 0.00 0.00 3.53
7806 9299 2.498167 AGTTGTGTGTGATCTGCTTCC 58.502 47.619 0.00 0.00 0.00 3.46
7859 9352 1.823295 GCCTCTTCATGGCGAGGTA 59.177 57.895 23.42 0.00 46.75 3.08
7894 9387 4.318332 TGATCTGACATTTCGCTGAAGTT 58.682 39.130 0.00 0.00 0.00 2.66
7956 9449 2.686915 GCATAAAGCTTCATCTGTGGCT 59.313 45.455 0.00 0.00 41.15 4.75
8018 9511 2.334977 TGTTGTCTTCTCTTAGGGCCA 58.665 47.619 6.18 0.00 0.00 5.36
8083 9577 8.724229 GTTAATAACTGGTTGGATTAGAAACGT 58.276 33.333 0.00 0.00 0.00 3.99
8198 9701 2.265367 TGAGGATTCAGTTAGGCCACA 58.735 47.619 5.01 0.00 0.00 4.17
8280 9783 7.665561 TTAGCAATTACAATTTGAAAAGGCC 57.334 32.000 2.79 0.00 0.00 5.19
8317 9820 7.346471 ACATAAGGTCAGGTACAAATTGCTAT 58.654 34.615 0.00 0.00 0.00 2.97
8578 10081 2.785258 GGCGATGCCGACAAACTC 59.215 61.111 0.00 0.00 44.91 3.01
8657 10160 1.371183 CCTCACGAGGCACCAAGAA 59.629 57.895 0.00 0.00 42.44 2.52
8938 10462 5.408356 ACAACAATTCGCTAGTACAGGTAG 58.592 41.667 0.00 0.00 0.00 3.18
8969 10493 5.337956 AACCATTAGATTATGGATGCCCA 57.662 39.130 9.49 0.00 46.63 5.36
9017 10541 4.748277 TTGAAACGGAGGGAGTATAAGG 57.252 45.455 0.00 0.00 0.00 2.69
9022 10546 6.155565 TCATCTATTTTGAAACGGAGGGAGTA 59.844 38.462 0.00 0.00 0.00 2.59
9023 10547 4.903045 TCTATTTTGAAACGGAGGGAGT 57.097 40.909 0.00 0.00 0.00 3.85
9024 10548 5.294552 GTCATCTATTTTGAAACGGAGGGAG 59.705 44.000 0.00 0.00 0.00 4.30
9025 10549 5.045869 AGTCATCTATTTTGAAACGGAGGGA 60.046 40.000 0.00 0.00 0.00 4.20
9026 10550 5.186198 AGTCATCTATTTTGAAACGGAGGG 58.814 41.667 0.00 0.00 0.00 4.30
9027 10551 5.874810 TGAGTCATCTATTTTGAAACGGAGG 59.125 40.000 0.00 0.00 0.00 4.30
9028 10552 6.968131 TGAGTCATCTATTTTGAAACGGAG 57.032 37.500 0.00 0.00 0.00 4.63
9029 10553 6.934645 AGTTGAGTCATCTATTTTGAAACGGA 59.065 34.615 1.70 0.00 0.00 4.69
9030 10554 7.133891 AGTTGAGTCATCTATTTTGAAACGG 57.866 36.000 1.70 0.00 0.00 4.44
9031 10555 8.895845 CAAAGTTGAGTCATCTATTTTGAAACG 58.104 33.333 4.14 0.00 38.91 3.60
9032 10556 9.736023 ACAAAGTTGAGTCATCTATTTTGAAAC 57.264 29.630 15.99 0.00 38.91 2.78
9035 10559 9.778741 AGTACAAAGTTGAGTCATCTATTTTGA 57.221 29.630 15.99 3.46 38.91 2.69
9055 10579 9.909644 CTCAGCTTTCTACTAACTTTAGTACAA 57.090 33.333 4.98 0.00 43.36 2.41
9056 10580 9.075678 ACTCAGCTTTCTACTAACTTTAGTACA 57.924 33.333 4.98 0.00 43.36 2.90
9057 10581 9.558648 GACTCAGCTTTCTACTAACTTTAGTAC 57.441 37.037 4.98 0.00 43.36 2.73
9058 10582 9.293404 TGACTCAGCTTTCTACTAACTTTAGTA 57.707 33.333 8.29 8.29 43.36 1.82
9059 10583 8.179509 TGACTCAGCTTTCTACTAACTTTAGT 57.820 34.615 6.85 6.85 45.39 2.24
9060 10584 9.296400 GATGACTCAGCTTTCTACTAACTTTAG 57.704 37.037 0.00 0.00 36.82 1.85
9061 10585 9.026121 AGATGACTCAGCTTTCTACTAACTTTA 57.974 33.333 0.00 0.00 0.00 1.85
9062 10586 7.902087 AGATGACTCAGCTTTCTACTAACTTT 58.098 34.615 0.00 0.00 0.00 2.66
9063 10587 7.475137 AGATGACTCAGCTTTCTACTAACTT 57.525 36.000 0.00 0.00 0.00 2.66
9064 10588 8.760980 ATAGATGACTCAGCTTTCTACTAACT 57.239 34.615 1.33 0.00 30.76 2.24
9065 10589 9.810545 AAATAGATGACTCAGCTTTCTACTAAC 57.189 33.333 1.33 0.00 30.76 2.34
9067 10591 9.809096 CAAAATAGATGACTCAGCTTTCTACTA 57.191 33.333 1.33 0.00 30.76 1.82
9068 10592 7.768120 CCAAAATAGATGACTCAGCTTTCTACT 59.232 37.037 1.33 0.00 30.76 2.57
9069 10593 7.766278 TCCAAAATAGATGACTCAGCTTTCTAC 59.234 37.037 1.33 0.00 30.76 2.59
9070 10594 7.851228 TCCAAAATAGATGACTCAGCTTTCTA 58.149 34.615 1.33 0.00 30.76 2.10
9071 10595 6.715280 TCCAAAATAGATGACTCAGCTTTCT 58.285 36.000 1.33 0.00 30.76 2.52
9072 10596 6.992063 TCCAAAATAGATGACTCAGCTTTC 57.008 37.500 1.33 0.00 30.76 2.62
9073 10597 6.128172 CGTTCCAAAATAGATGACTCAGCTTT 60.128 38.462 1.33 0.00 30.76 3.51
9074 10598 5.352569 CGTTCCAAAATAGATGACTCAGCTT 59.647 40.000 1.33 0.00 30.76 3.74
9075 10599 4.872691 CGTTCCAAAATAGATGACTCAGCT 59.127 41.667 1.74 1.74 33.54 4.24
9076 10600 4.034510 CCGTTCCAAAATAGATGACTCAGC 59.965 45.833 0.00 0.00 0.00 4.26
9077 10601 5.419542 TCCGTTCCAAAATAGATGACTCAG 58.580 41.667 0.00 0.00 0.00 3.35
9078 10602 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
9079 10603 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
9080 10604 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
9081 10605 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
9082 10606 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
9083 10607 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
9084 10608 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
9085 10609 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
9086 10610 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
9087 10611 3.198417 GGTACTCCCTCCGTTCCAAAATA 59.802 47.826 0.00 0.00 0.00 1.40
9088 10612 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
9089 10613 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
9090 10614 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
9091 10615 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
9092 10616 1.002069 TAGGTACTCCCTCCGTTCCA 58.998 55.000 0.00 0.00 44.81 3.53
9093 10617 2.237643 GATAGGTACTCCCTCCGTTCC 58.762 57.143 0.00 0.00 44.81 3.62
9094 10618 2.941480 TGATAGGTACTCCCTCCGTTC 58.059 52.381 0.00 0.00 44.81 3.95
9095 10619 3.614568 ATGATAGGTACTCCCTCCGTT 57.385 47.619 0.00 0.00 44.81 4.44
9096 10620 4.949966 ATATGATAGGTACTCCCTCCGT 57.050 45.455 0.00 0.00 44.81 4.69
9097 10621 5.511363 AGAATATGATAGGTACTCCCTCCG 58.489 45.833 0.00 0.00 44.81 4.63
9098 10622 7.645002 ACTAGAATATGATAGGTACTCCCTCC 58.355 42.308 0.00 0.00 44.81 4.30
9099 10623 9.536510 AAACTAGAATATGATAGGTACTCCCTC 57.463 37.037 0.00 0.00 44.81 4.30
9184 10711 9.699410 ATCAAATCATATCTTACCAAAACCTCA 57.301 29.630 0.00 0.00 0.00 3.86
9289 10822 5.047847 GCAACCTATGTGTACGTCATGTAT 58.952 41.667 11.84 0.00 35.02 2.29
9309 10844 5.059833 TGATTATACGCATATGTGTGGCAA 58.940 37.500 28.04 19.01 40.16 4.52
9315 10850 4.329801 ACGCCATGATTATACGCATATGTG 59.670 41.667 14.72 14.72 0.00 3.21
9377 10912 1.475280 CTGTTCCTGGGTGCATGAATG 59.525 52.381 0.00 0.00 0.00 2.67
9378 10913 1.355381 TCTGTTCCTGGGTGCATGAAT 59.645 47.619 0.00 0.00 0.00 2.57
9447 10984 2.113986 GAGTGGCACCCAAGCTGT 59.886 61.111 15.27 0.00 34.18 4.40
9574 11114 4.641645 CAGACCCCGCCAAGTGCA 62.642 66.667 0.00 0.00 41.33 4.57
9630 11170 2.301738 GGCTCAGCAGGGTTAGGGT 61.302 63.158 0.00 0.00 0.00 4.34
9631 11171 2.592308 GGCTCAGCAGGGTTAGGG 59.408 66.667 0.00 0.00 0.00 3.53
9632 11172 2.592308 GGGCTCAGCAGGGTTAGG 59.408 66.667 0.00 0.00 0.00 2.69
9633 11173 2.187946 CGGGCTCAGCAGGGTTAG 59.812 66.667 0.00 0.00 0.00 2.34
9634 11174 2.606519 ACGGGCTCAGCAGGGTTA 60.607 61.111 0.00 0.00 0.00 2.85
9635 11175 4.021925 GACGGGCTCAGCAGGGTT 62.022 66.667 0.00 0.00 0.00 4.11
9726 11269 1.135199 GTCGATCTCAGGGTTTGCGTA 60.135 52.381 0.00 0.00 0.00 4.42
9759 11302 9.941991 CAAAAATCAGCATATTTCAGTTAAACG 57.058 29.630 0.00 0.00 0.00 3.60
9765 11308 7.752239 CGTCTTCAAAAATCAGCATATTTCAGT 59.248 33.333 0.00 0.00 0.00 3.41
9772 11315 5.334802 CCACACGTCTTCAAAAATCAGCATA 60.335 40.000 0.00 0.00 0.00 3.14
9782 11325 1.890876 CCATCCCACACGTCTTCAAA 58.109 50.000 0.00 0.00 0.00 2.69
9783 11326 3.623848 CCATCCCACACGTCTTCAA 57.376 52.632 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.