Multiple sequence alignment - TraesCS6D01G259500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G259500 chr6D 100.000 7738 0 0 1 7738 365733952 365726215 0.000000e+00 14290.0
1 TraesCS6D01G259500 chr6B 97.001 1867 46 7 3999 5861 550319387 550317527 0.000000e+00 3129.0
2 TraesCS6D01G259500 chr6B 96.246 1838 57 7 2022 3856 550321238 550319410 0.000000e+00 3001.0
3 TraesCS6D01G259500 chr6B 93.212 1370 52 14 623 1973 550322577 550321230 0.000000e+00 1977.0
4 TraesCS6D01G259500 chr6B 93.405 834 33 8 6023 6850 550317528 550316711 0.000000e+00 1216.0
5 TraesCS6D01G259500 chr6B 83.442 308 32 10 7100 7399 550316461 550316165 1.280000e-67 268.0
6 TraesCS6D01G259500 chr6B 83.217 143 16 2 3853 3987 171967016 171967158 2.930000e-24 124.0
7 TraesCS6D01G259500 chr6B 91.463 82 7 0 6865 6946 550316647 550316566 6.350000e-21 113.0
8 TraesCS6D01G259500 chr6A 95.617 1871 59 17 3999 5861 506537548 506535693 0.000000e+00 2979.0
9 TraesCS6D01G259500 chr6A 93.326 1753 52 23 623 2347 506540695 506538980 0.000000e+00 2529.0
10 TraesCS6D01G259500 chr6A 96.414 1422 35 6 2443 3856 506538984 506537571 0.000000e+00 2329.0
11 TraesCS6D01G259500 chr6A 94.243 938 48 4 6065 7002 506535643 506534712 0.000000e+00 1428.0
12 TraesCS6D01G259500 chr6A 84.418 661 55 24 7097 7738 506526549 506525918 2.390000e-169 606.0
13 TraesCS6D01G259500 chr6A 82.064 407 39 22 186 568 143970238 143970634 4.510000e-82 316.0
14 TraesCS6D01G259500 chr6A 96.364 55 1 1 3940 3994 108925982 108925929 1.070000e-13 89.8
15 TraesCS6D01G259500 chr1D 96.320 625 22 1 1 624 224397196 224397820 0.000000e+00 1026.0
16 TraesCS6D01G259500 chr1D 94.972 179 9 0 5851 6029 323833080 323833258 1.640000e-71 281.0
17 TraesCS6D01G259500 chr3A 95.534 627 27 1 1 626 614232852 614233478 0.000000e+00 1002.0
18 TraesCS6D01G259500 chr3A 90.000 210 15 5 5856 6062 650035711 650035917 4.600000e-67 267.0
19 TraesCS6D01G259500 chr3A 87.162 148 16 3 3850 3994 359076598 359076451 1.730000e-36 165.0
20 TraesCS6D01G259500 chr3A 82.550 149 14 6 3856 3994 16114000 16113854 3.790000e-23 121.0
21 TraesCS6D01G259500 chr3A 83.459 133 11 4 3872 3994 746316911 746316780 6.350000e-21 113.0
22 TraesCS6D01G259500 chr2D 97.582 579 14 0 1 579 503572270 503572848 0.000000e+00 992.0
23 TraesCS6D01G259500 chr2D 82.540 378 50 14 2 371 503572344 503572713 1.250000e-82 318.0
24 TraesCS6D01G259500 chr2D 96.067 178 6 1 5860 6037 560959485 560959661 9.820000e-74 289.0
25 TraesCS6D01G259500 chr2D 94.086 186 9 1 5851 6036 89441455 89441272 1.640000e-71 281.0
26 TraesCS6D01G259500 chr2D 95.918 49 2 0 573 621 118235776 118235824 6.440000e-11 80.5
27 TraesCS6D01G259500 chr1A 95.016 622 30 1 1 621 219383727 219384348 0.000000e+00 976.0
28 TraesCS6D01G259500 chr1A 83.217 143 16 2 3853 3987 580659375 580659233 2.930000e-24 124.0
29 TraesCS6D01G259500 chr4A 94.277 629 24 3 1 628 56265660 56265043 0.000000e+00 952.0
30 TraesCS6D01G259500 chr2A 93.207 633 25 3 1 621 277608653 277608027 0.000000e+00 915.0
31 TraesCS6D01G259500 chr2A 92.469 571 21 1 1 571 32943410 32943958 0.000000e+00 797.0
32 TraesCS6D01G259500 chr2A 93.023 43 3 0 4110 4152 66294843 66294801 6.480000e-06 63.9
33 TraesCS6D01G259500 chr5D 95.949 469 16 3 158 625 46089136 46089602 0.000000e+00 758.0
34 TraesCS6D01G259500 chr5D 97.884 189 4 0 1 189 46088703 46088891 2.080000e-85 327.0
35 TraesCS6D01G259500 chr5D 96.512 172 4 2 5853 6024 274578007 274578176 4.570000e-72 283.0
36 TraesCS6D01G259500 chr5A 94.773 440 21 2 186 624 600355437 600354999 0.000000e+00 684.0
37 TraesCS6D01G259500 chr5A 84.932 146 14 2 3850 3987 152480833 152480978 2.910000e-29 141.0
38 TraesCS6D01G259500 chr5A 82.877 146 15 4 3852 3987 136398127 136397982 1.050000e-23 122.0
39 TraesCS6D01G259500 chr7D 95.556 180 8 0 5851 6030 381458379 381458558 9.820000e-74 289.0
40 TraesCS6D01G259500 chr7D 84.906 212 29 3 2680 2889 188577586 188577796 2.190000e-50 211.0
41 TraesCS6D01G259500 chr7D 73.964 507 82 37 174 635 167364186 167363685 8.040000e-35 159.0
42 TraesCS6D01G259500 chr7D 76.821 302 52 15 2956 3242 188577938 188578236 3.740000e-33 154.0
43 TraesCS6D01G259500 chr4D 96.067 178 5 2 5856 6033 93338209 93338034 9.820000e-74 289.0
44 TraesCS6D01G259500 chr1B 94.149 188 9 2 5856 6043 15441217 15441032 1.270000e-72 285.0
45 TraesCS6D01G259500 chr3D 94.149 188 8 3 5859 6044 467257994 467257808 4.570000e-72 283.0
46 TraesCS6D01G259500 chr3D 90.385 52 4 1 573 623 529504054 529504003 5.010000e-07 67.6
47 TraesCS6D01G259500 chr7B 84.018 219 31 4 2673 2889 332804902 332805118 2.830000e-49 207.0
48 TraesCS6D01G259500 chr7B 77.152 302 51 15 2956 3242 332805262 332805560 8.040000e-35 159.0
49 TraesCS6D01G259500 chr7B 91.379 58 5 0 3937 3994 184214687 184214744 6.440000e-11 80.5
50 TraesCS6D01G259500 chr7B 93.878 49 3 0 573 621 199992101 199992053 2.990000e-09 75.0
51 TraesCS6D01G259500 chr3B 84.615 156 11 6 3850 3994 530257447 530257600 8.090000e-30 143.0
52 TraesCS6D01G259500 chr3B 83.660 153 12 6 3853 3994 243250305 243250455 1.750000e-26 132.0
53 TraesCS6D01G259500 chr3B 82.993 147 17 3 3856 3994 749997819 749997673 8.150000e-25 126.0
54 TraesCS6D01G259500 chr4B 86.290 124 9 2 3849 3964 568607404 568607527 2.270000e-25 128.0
55 TraesCS6D01G259500 chr4B 83.217 143 16 2 3853 3987 366928421 366928563 2.930000e-24 124.0
56 TraesCS6D01G259500 chr4B 81.818 143 17 7 3851 3984 211982168 211982026 2.280000e-20 111.0
57 TraesCS6D01G259500 chrUn 86.667 105 6 2 3853 3949 85135484 85135380 8.210000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G259500 chr6D 365726215 365733952 7737 True 14290.000000 14290 100.0000 1 7738 1 chr6D.!!$R1 7737
1 TraesCS6D01G259500 chr6B 550316165 550322577 6412 True 1617.333333 3129 92.4615 623 7399 6 chr6B.!!$R1 6776
2 TraesCS6D01G259500 chr6A 506534712 506540695 5983 True 2316.250000 2979 94.9000 623 7002 4 chr6A.!!$R3 6379
3 TraesCS6D01G259500 chr6A 506525918 506526549 631 True 606.000000 606 84.4180 7097 7738 1 chr6A.!!$R2 641
4 TraesCS6D01G259500 chr1D 224397196 224397820 624 False 1026.000000 1026 96.3200 1 624 1 chr1D.!!$F1 623
5 TraesCS6D01G259500 chr3A 614232852 614233478 626 False 1002.000000 1002 95.5340 1 626 1 chr3A.!!$F1 625
6 TraesCS6D01G259500 chr2D 503572270 503572848 578 False 655.000000 992 90.0610 1 579 2 chr2D.!!$F3 578
7 TraesCS6D01G259500 chr1A 219383727 219384348 621 False 976.000000 976 95.0160 1 621 1 chr1A.!!$F1 620
8 TraesCS6D01G259500 chr4A 56265043 56265660 617 True 952.000000 952 94.2770 1 628 1 chr4A.!!$R1 627
9 TraesCS6D01G259500 chr2A 277608027 277608653 626 True 915.000000 915 93.2070 1 621 1 chr2A.!!$R2 620
10 TraesCS6D01G259500 chr2A 32943410 32943958 548 False 797.000000 797 92.4690 1 571 1 chr2A.!!$F1 570
11 TraesCS6D01G259500 chr5D 46088703 46089602 899 False 542.500000 758 96.9165 1 625 2 chr5D.!!$F2 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
823 1126 0.466555 CAGACCCGAAAAACCCACCA 60.467 55.000 0.00 0.0 0.00 4.17 F
1051 1359 0.179181 AACACGCATCGACGATACGT 60.179 50.000 26.10 26.1 41.86 3.57 F
1052 1360 0.652071 ACACGCATCGACGATACGTA 59.348 50.000 29.68 0.0 39.59 3.57 F
1284 1592 1.147824 CCAGATCCCGCATTGCTCT 59.852 57.895 7.12 0.0 0.00 4.09 F
1702 2023 1.208706 TTGATTGGTGCCCCGATAGA 58.791 50.000 0.00 0.0 34.74 1.98 F
2092 2470 1.672441 GCTCTCTTGCTCTCACTGTGG 60.672 57.143 8.11 0.0 0.00 4.17 F
3989 4389 1.842052 TGTGGACTACATACGGAGCA 58.158 50.000 0.00 0.0 33.42 4.26 F
5232 5642 0.473755 TCTTGCAGAAGGAAGGCACA 59.526 50.000 0.00 0.0 42.77 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2092 2470 1.693083 GATGGTTGTGTACGCGAGCC 61.693 60.000 15.93 13.32 0.00 4.70 R
2951 3346 4.398044 TGACACCTTCAAAGAAAGAACACC 59.602 41.667 0.00 0.00 0.00 4.16 R
3060 3455 6.203723 GGATCCAGAATTAAGGTGAAGAATCG 59.796 42.308 6.95 0.00 0.00 3.34 R
3318 3713 6.658816 ACTCACAAATGCAACCACAAGATATA 59.341 34.615 0.00 0.00 0.00 0.86 R
3698 4096 2.402564 CACCCTATGTGGACCTCAGAT 58.597 52.381 2.23 0.00 41.52 2.90 R
3993 4393 0.249531 TGTACAGAAACGAGCGGCAA 60.250 50.000 1.45 0.00 0.00 4.52 R
6006 6420 0.712380 ACTACCCCCTCCGTTCCTAA 59.288 55.000 0.00 0.00 0.00 2.69 R
6967 7518 0.035317 AGTGCAGCAAGTGATCGGAA 59.965 50.000 0.00 0.00 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 1.078918 CTGCAATGGAGCTCGACCA 60.079 57.895 7.83 0.50 41.83 4.02
148 149 4.047125 CCTTGGACCATGCCGGGT 62.047 66.667 2.18 0.00 46.02 5.28
235 512 2.753043 CGGGCTGCAATGGAGCTT 60.753 61.111 25.07 0.00 36.63 3.74
438 715 4.802051 GGGCCGCAATGGAGCTCA 62.802 66.667 17.19 1.87 42.00 4.26
790 1093 0.949105 CATATAGCCCGAACCACCGC 60.949 60.000 0.00 0.00 0.00 5.68
823 1126 0.466555 CAGACCCGAAAAACCCACCA 60.467 55.000 0.00 0.00 0.00 4.17
845 1148 3.083349 CTGCCGATCCAGGGTCCA 61.083 66.667 0.00 0.00 0.00 4.02
846 1149 3.083349 TGCCGATCCAGGGTCCAG 61.083 66.667 0.00 0.00 0.00 3.86
847 1150 3.866582 GCCGATCCAGGGTCCAGG 61.867 72.222 0.00 0.00 0.00 4.45
1051 1359 0.179181 AACACGCATCGACGATACGT 60.179 50.000 26.10 26.10 41.86 3.57
1052 1360 0.652071 ACACGCATCGACGATACGTA 59.348 50.000 29.68 0.00 39.59 3.57
1216 1524 2.675242 CGCCTCCCCATTACCACCA 61.675 63.158 0.00 0.00 0.00 4.17
1217 1525 1.694856 GCCTCCCCATTACCACCAA 59.305 57.895 0.00 0.00 0.00 3.67
1284 1592 1.147824 CCAGATCCCGCATTGCTCT 59.852 57.895 7.12 0.00 0.00 4.09
1600 1921 7.092264 TGGGATTAAAGTGATGGATTCTTCTCT 60.092 37.037 0.00 0.00 0.00 3.10
1601 1922 8.432805 GGGATTAAAGTGATGGATTCTTCTCTA 58.567 37.037 0.00 0.00 0.00 2.43
1602 1923 9.487790 GGATTAAAGTGATGGATTCTTCTCTAG 57.512 37.037 0.00 0.00 0.00 2.43
1610 1931 6.657117 TGATGGATTCTTCTCTAGTAGGATCG 59.343 42.308 0.00 0.00 30.69 3.69
1687 2008 5.014123 TCTCCTGTTTGGGATAGTGTTTGAT 59.986 40.000 0.00 0.00 34.56 2.57
1696 2017 1.917872 TAGTGTTTGATTGGTGCCCC 58.082 50.000 0.00 0.00 0.00 5.80
1702 2023 1.208706 TTGATTGGTGCCCCGATAGA 58.791 50.000 0.00 0.00 34.74 1.98
1967 2345 4.890088 TGCCGTCAGGTATTACAATATCC 58.110 43.478 0.00 0.00 40.50 2.59
1969 2347 4.560108 GCCGTCAGGTATTACAATATCCGT 60.560 45.833 0.00 0.00 40.50 4.69
1970 2348 5.535333 CCGTCAGGTATTACAATATCCGTT 58.465 41.667 0.00 0.00 0.00 4.44
1971 2349 5.404366 CCGTCAGGTATTACAATATCCGTTG 59.596 44.000 0.00 0.00 35.25 4.10
1972 2350 5.981315 CGTCAGGTATTACAATATCCGTTGT 59.019 40.000 0.00 0.00 44.09 3.32
1973 2351 7.140705 CGTCAGGTATTACAATATCCGTTGTA 58.859 38.462 0.00 0.00 42.08 2.41
1974 2352 7.811236 CGTCAGGTATTACAATATCCGTTGTAT 59.189 37.037 0.89 0.00 42.35 2.29
1975 2353 8.922676 GTCAGGTATTACAATATCCGTTGTATG 58.077 37.037 0.89 0.00 42.35 2.39
1976 2354 8.644216 TCAGGTATTACAATATCCGTTGTATGT 58.356 33.333 0.89 0.00 42.35 2.29
1977 2355 9.268268 CAGGTATTACAATATCCGTTGTATGTT 57.732 33.333 0.89 0.00 42.35 2.71
1978 2356 9.841295 AGGTATTACAATATCCGTTGTATGTTT 57.159 29.630 0.89 0.00 42.35 2.83
1982 2360 9.997482 ATTACAATATCCGTTGTATGTTTCAAC 57.003 29.630 0.89 0.00 42.35 3.18
1983 2361 7.441890 ACAATATCCGTTGTATGTTTCAACA 57.558 32.000 8.98 0.00 43.40 3.33
1984 2362 7.302524 ACAATATCCGTTGTATGTTTCAACAC 58.697 34.615 8.98 0.00 43.40 3.32
1985 2363 7.041030 ACAATATCCGTTGTATGTTTCAACACA 60.041 33.333 8.98 0.00 43.40 3.72
1986 2364 4.539509 TCCGTTGTATGTTTCAACACAC 57.460 40.909 8.98 0.00 43.40 3.82
1987 2365 4.193090 TCCGTTGTATGTTTCAACACACT 58.807 39.130 2.95 0.00 43.40 3.55
1988 2366 4.034626 TCCGTTGTATGTTTCAACACACTG 59.965 41.667 2.95 0.00 43.40 3.66
1989 2367 4.034626 CCGTTGTATGTTTCAACACACTGA 59.965 41.667 2.95 0.00 43.40 3.41
1990 2368 5.277779 CCGTTGTATGTTTCAACACACTGAT 60.278 40.000 2.95 0.00 43.40 2.90
1991 2369 6.073494 CCGTTGTATGTTTCAACACACTGATA 60.073 38.462 2.95 0.00 43.40 2.15
1992 2370 7.348956 CGTTGTATGTTTCAACACACTGATAA 58.651 34.615 2.95 0.00 43.40 1.75
1993 2371 7.530525 CGTTGTATGTTTCAACACACTGATAAG 59.469 37.037 2.95 0.00 43.40 1.73
1994 2372 8.342634 GTTGTATGTTTCAACACACTGATAAGT 58.657 33.333 2.95 0.00 42.51 2.24
1995 2373 9.549078 TTGTATGTTTCAACACACTGATAAGTA 57.451 29.630 2.95 0.00 42.51 2.24
1996 2374 9.203421 TGTATGTTTCAACACACTGATAAGTAG 57.797 33.333 2.95 0.00 42.51 2.57
1997 2375 6.539649 TGTTTCAACACACTGATAAGTAGC 57.460 37.500 0.00 0.00 33.17 3.58
1998 2376 6.052360 TGTTTCAACACACTGATAAGTAGCA 58.948 36.000 0.00 0.00 33.17 3.49
1999 2377 6.540551 TGTTTCAACACACTGATAAGTAGCAA 59.459 34.615 0.00 0.00 33.17 3.91
2000 2378 6.785488 TTCAACACACTGATAAGTAGCAAG 57.215 37.500 0.00 0.00 0.00 4.01
2001 2379 6.096673 TCAACACACTGATAAGTAGCAAGA 57.903 37.500 0.00 0.00 0.00 3.02
2002 2380 6.159293 TCAACACACTGATAAGTAGCAAGAG 58.841 40.000 0.00 0.00 0.00 2.85
2003 2381 4.499183 ACACACTGATAAGTAGCAAGAGC 58.501 43.478 0.00 0.00 42.56 4.09
2004 2382 4.021104 ACACACTGATAAGTAGCAAGAGCA 60.021 41.667 0.00 0.00 45.49 4.26
2005 2383 5.114780 CACACTGATAAGTAGCAAGAGCAT 58.885 41.667 0.00 0.00 45.49 3.79
2006 2384 5.583854 CACACTGATAAGTAGCAAGAGCATT 59.416 40.000 0.00 0.00 45.49 3.56
2007 2385 5.583854 ACACTGATAAGTAGCAAGAGCATTG 59.416 40.000 0.00 0.00 45.49 2.82
2008 2386 5.583854 CACTGATAAGTAGCAAGAGCATTGT 59.416 40.000 3.93 0.00 45.49 2.71
2009 2387 6.093219 CACTGATAAGTAGCAAGAGCATTGTT 59.907 38.462 3.93 0.72 45.49 2.83
2010 2388 6.656693 ACTGATAAGTAGCAAGAGCATTGTTT 59.343 34.615 3.93 0.00 45.49 2.83
2011 2389 7.175641 ACTGATAAGTAGCAAGAGCATTGTTTT 59.824 33.333 3.93 0.00 45.49 2.43
2012 2390 7.530010 TGATAAGTAGCAAGAGCATTGTTTTC 58.470 34.615 3.93 0.00 45.49 2.29
2013 2391 4.773323 AGTAGCAAGAGCATTGTTTTCC 57.227 40.909 3.93 0.00 45.49 3.13
2014 2392 3.507622 AGTAGCAAGAGCATTGTTTTCCC 59.492 43.478 3.93 0.00 45.49 3.97
2015 2393 2.318908 AGCAAGAGCATTGTTTTCCCA 58.681 42.857 3.93 0.00 45.49 4.37
2016 2394 2.901839 AGCAAGAGCATTGTTTTCCCAT 59.098 40.909 3.93 0.00 45.49 4.00
2017 2395 2.997986 GCAAGAGCATTGTTTTCCCATG 59.002 45.455 3.93 0.00 41.58 3.66
2018 2396 3.306225 GCAAGAGCATTGTTTTCCCATGA 60.306 43.478 0.00 0.00 41.58 3.07
2019 2397 4.622220 GCAAGAGCATTGTTTTCCCATGAT 60.622 41.667 0.00 0.00 41.58 2.45
2020 2398 4.730949 AGAGCATTGTTTTCCCATGATG 57.269 40.909 0.00 0.00 0.00 3.07
2021 2399 4.346730 AGAGCATTGTTTTCCCATGATGA 58.653 39.130 0.00 0.00 0.00 2.92
2022 2400 4.960469 AGAGCATTGTTTTCCCATGATGAT 59.040 37.500 0.00 0.00 0.00 2.45
2023 2401 5.068723 AGAGCATTGTTTTCCCATGATGATC 59.931 40.000 0.00 0.00 31.97 2.92
2024 2402 4.960469 AGCATTGTTTTCCCATGATGATCT 59.040 37.500 0.00 0.00 0.00 2.75
2025 2403 6.131264 AGCATTGTTTTCCCATGATGATCTA 58.869 36.000 0.00 0.00 0.00 1.98
2032 2410 9.645128 TGTTTTCCCATGATGATCTAATGTTAT 57.355 29.630 0.00 0.00 0.00 1.89
2064 2442 9.339492 CTTATGAGAAAACAGAAGCAGAAATTC 57.661 33.333 0.00 0.00 33.52 2.17
2092 2470 1.672441 GCTCTCTTGCTCTCACTGTGG 60.672 57.143 8.11 0.00 0.00 4.17
2100 2478 4.363990 CTCACTGTGGGCTCGCGT 62.364 66.667 5.77 0.00 0.00 6.01
2270 2662 9.169592 CCTCGGTGAGTAAATTCCTAATTTTAA 57.830 33.333 3.19 0.00 41.16 1.52
2354 2746 9.444600 AATTATTACATTCGTACTTTGGTGTCT 57.555 29.630 0.00 0.00 0.00 3.41
2384 2776 4.829064 TGCACCAAGTTGTAAGATCAAC 57.171 40.909 1.45 1.94 45.33 3.18
2394 2786 9.436957 CAAGTTGTAAGATCAACCTAACATAGT 57.563 33.333 0.00 0.00 45.90 2.12
2406 2798 7.704899 TCAACCTAACATAGTATGAACACATCG 59.295 37.037 17.13 0.00 0.00 3.84
2438 2830 8.162878 AGGTTTAATCATGAATGCAGTGATAG 57.837 34.615 0.00 0.00 32.60 2.08
2469 2861 7.980099 ACTTGAAAGTTTCTCCGAACGATATAT 59.020 33.333 16.33 0.00 35.21 0.86
3060 3455 6.492429 AGGTAACCTGAAAATCCTTGTTAACC 59.508 38.462 2.48 0.00 29.57 2.85
3116 3511 3.370978 CAGTGCAAGTATGTACCTTTCCG 59.629 47.826 0.00 0.00 42.48 4.30
3317 3712 7.368059 CACTATCTCCATACGTAGTGCATAAA 58.632 38.462 0.08 0.00 45.73 1.40
3318 3713 8.029522 CACTATCTCCATACGTAGTGCATAAAT 58.970 37.037 0.08 0.00 45.73 1.40
3398 3793 5.179929 AGCTTGCAAATTTCTTTGTATTGCC 59.820 36.000 0.00 0.00 44.27 4.52
3698 4096 5.617528 TTCACAGTTTACTTGACCCTACA 57.382 39.130 0.00 0.00 0.00 2.74
3791 4191 3.154827 TGGATTCTTCCTGTGTTTCCC 57.845 47.619 0.00 0.00 43.07 3.97
3824 4224 4.980339 TTCCTATATGAAGCATGCTCCA 57.020 40.909 22.93 16.69 0.00 3.86
3862 4262 7.713734 TTCATATTAGGTAATACTCCCTCCG 57.286 40.000 0.00 0.00 31.57 4.63
3863 4263 6.797707 TCATATTAGGTAATACTCCCTCCGT 58.202 40.000 0.00 0.00 31.57 4.69
3864 4264 7.243824 TCATATTAGGTAATACTCCCTCCGTT 58.756 38.462 0.00 0.00 31.57 4.44
3866 4266 2.675583 AGGTAATACTCCCTCCGTTCC 58.324 52.381 0.00 0.00 0.00 3.62
3867 4267 2.246849 AGGTAATACTCCCTCCGTTCCT 59.753 50.000 0.00 0.00 0.00 3.36
3868 4268 3.464833 AGGTAATACTCCCTCCGTTCCTA 59.535 47.826 0.00 0.00 0.00 2.94
3871 4271 5.306419 GGTAATACTCCCTCCGTTCCTAAAT 59.694 44.000 0.00 0.00 0.00 1.40
3872 4272 6.494835 GGTAATACTCCCTCCGTTCCTAAATA 59.505 42.308 0.00 0.00 0.00 1.40
3875 4275 3.959449 ACTCCCTCCGTTCCTAAATACTC 59.041 47.826 0.00 0.00 0.00 2.59
3876 4276 3.303049 TCCCTCCGTTCCTAAATACTCC 58.697 50.000 0.00 0.00 0.00 3.85
3879 4279 3.321396 CCTCCGTTCCTAAATACTCCCTC 59.679 52.174 0.00 0.00 0.00 4.30
3880 4280 4.216708 CTCCGTTCCTAAATACTCCCTCT 58.783 47.826 0.00 0.00 0.00 3.69
3881 4281 3.958798 TCCGTTCCTAAATACTCCCTCTG 59.041 47.826 0.00 0.00 0.00 3.35
3882 4282 3.705072 CCGTTCCTAAATACTCCCTCTGT 59.295 47.826 0.00 0.00 0.00 3.41
3883 4283 4.891756 CCGTTCCTAAATACTCCCTCTGTA 59.108 45.833 0.00 0.00 0.00 2.74
3884 4284 5.361857 CCGTTCCTAAATACTCCCTCTGTAA 59.638 44.000 0.00 0.00 0.00 2.41
3885 4285 6.127253 CCGTTCCTAAATACTCCCTCTGTAAA 60.127 42.308 0.00 0.00 0.00 2.01
3886 4286 6.755607 CGTTCCTAAATACTCCCTCTGTAAAC 59.244 42.308 0.00 0.00 0.00 2.01
3887 4287 7.363617 CGTTCCTAAATACTCCCTCTGTAAACT 60.364 40.741 0.00 0.00 0.00 2.66
3888 4288 8.975295 GTTCCTAAATACTCCCTCTGTAAACTA 58.025 37.037 0.00 0.00 0.00 2.24
3889 4289 9.725206 TTCCTAAATACTCCCTCTGTAAACTAT 57.275 33.333 0.00 0.00 0.00 2.12
3897 4297 8.411991 ACTCCCTCTGTAAACTATATAAGAGC 57.588 38.462 2.53 0.00 31.76 4.09
3898 4298 8.005388 ACTCCCTCTGTAAACTATATAAGAGCA 58.995 37.037 2.53 0.00 31.76 4.26
3899 4299 8.958060 TCCCTCTGTAAACTATATAAGAGCAT 57.042 34.615 2.53 0.00 31.76 3.79
3900 4300 9.381038 TCCCTCTGTAAACTATATAAGAGCATT 57.619 33.333 2.53 0.00 31.76 3.56
3952 4352 9.819754 ATATTAGTTTACGGAGGGAGTATAAGT 57.180 33.333 0.00 0.00 0.00 2.24
3953 4353 7.573968 TTAGTTTACGGAGGGAGTATAAGTC 57.426 40.000 0.00 0.00 0.00 3.01
3954 4354 5.764432 AGTTTACGGAGGGAGTATAAGTCT 58.236 41.667 0.00 0.00 0.00 3.24
3955 4355 6.193504 AGTTTACGGAGGGAGTATAAGTCTT 58.806 40.000 0.00 0.00 0.00 3.01
3956 4356 6.666980 AGTTTACGGAGGGAGTATAAGTCTTT 59.333 38.462 0.00 0.00 0.00 2.52
3957 4357 6.705863 TTACGGAGGGAGTATAAGTCTTTC 57.294 41.667 0.00 0.00 0.00 2.62
3958 4358 4.869451 ACGGAGGGAGTATAAGTCTTTCT 58.131 43.478 0.00 0.00 0.00 2.52
3959 4359 6.011122 ACGGAGGGAGTATAAGTCTTTCTA 57.989 41.667 0.00 0.00 0.00 2.10
3960 4360 6.063404 ACGGAGGGAGTATAAGTCTTTCTAG 58.937 44.000 0.00 0.00 0.00 2.43
3961 4361 6.126536 ACGGAGGGAGTATAAGTCTTTCTAGA 60.127 42.308 0.00 0.00 0.00 2.43
3962 4362 6.428771 CGGAGGGAGTATAAGTCTTTCTAGAG 59.571 46.154 0.00 0.00 0.00 2.43
3963 4363 7.519927 GGAGGGAGTATAAGTCTTTCTAGAGA 58.480 42.308 0.00 0.00 0.00 3.10
3964 4364 7.446319 GGAGGGAGTATAAGTCTTTCTAGAGAC 59.554 44.444 4.36 4.36 45.05 3.36
3974 4374 5.415221 GTCTTTCTAGAGACTCCAATGTGG 58.585 45.833 0.00 0.00 42.18 4.17
3975 4375 5.186021 GTCTTTCTAGAGACTCCAATGTGGA 59.814 44.000 0.00 0.00 45.34 4.02
3976 4376 5.186021 TCTTTCTAGAGACTCCAATGTGGAC 59.814 44.000 0.00 0.00 42.67 4.02
3977 4377 4.323569 TCTAGAGACTCCAATGTGGACT 57.676 45.455 0.00 0.00 42.67 3.85
3978 4378 5.452341 TCTAGAGACTCCAATGTGGACTA 57.548 43.478 0.00 0.00 42.67 2.59
3979 4379 5.194432 TCTAGAGACTCCAATGTGGACTAC 58.806 45.833 0.00 0.00 42.67 2.73
3980 4380 3.779444 AGAGACTCCAATGTGGACTACA 58.221 45.455 0.00 0.00 42.67 2.74
3989 4389 1.842052 TGTGGACTACATACGGAGCA 58.158 50.000 0.00 0.00 33.42 4.26
3990 4390 2.172679 TGTGGACTACATACGGAGCAA 58.827 47.619 0.00 0.00 33.42 3.91
3991 4391 2.563620 TGTGGACTACATACGGAGCAAA 59.436 45.455 0.00 0.00 33.42 3.68
3992 4392 3.007074 TGTGGACTACATACGGAGCAAAA 59.993 43.478 0.00 0.00 33.42 2.44
3993 4393 4.189231 GTGGACTACATACGGAGCAAAAT 58.811 43.478 0.00 0.00 0.00 1.82
3994 4394 4.634443 GTGGACTACATACGGAGCAAAATT 59.366 41.667 0.00 0.00 0.00 1.82
3995 4395 4.634004 TGGACTACATACGGAGCAAAATTG 59.366 41.667 0.00 0.00 0.00 2.32
4023 4423 7.493313 GCTCGTTTCTGTACAAATTCAAATTG 58.507 34.615 0.00 0.00 0.00 2.32
4024 4424 7.167468 GCTCGTTTCTGTACAAATTCAAATTGT 59.833 33.333 0.00 0.00 43.14 2.71
4052 4452 9.170584 GAATTAAACTGTTCTACTTTGTTGCTC 57.829 33.333 0.00 0.00 0.00 4.26
4371 4771 7.425577 TGTTTTGTCTATGAGTTGTGAGATG 57.574 36.000 0.00 0.00 0.00 2.90
4401 4801 8.133024 TGTAACCTTATCTTGCCATTTGAATT 57.867 30.769 0.00 0.00 0.00 2.17
4604 5014 5.392919 CGACATATCCCAGCTCTGAGATAAG 60.393 48.000 9.28 4.27 34.66 1.73
4752 5162 4.571176 GGTGTTTCCGTTGAGAATATCTCC 59.429 45.833 5.00 0.00 42.73 3.71
4987 5397 8.126700 TGAAATCATCTTTCGATCATTGATGTG 58.873 33.333 3.32 0.00 36.74 3.21
4998 5408 9.762933 TTCGATCATTGATGTGAAGTTGATATA 57.237 29.630 3.32 0.00 0.00 0.86
5209 5619 5.183904 GTGAGCTCATAATGTGTTTCCCTTT 59.816 40.000 21.47 0.00 0.00 3.11
5232 5642 0.473755 TCTTGCAGAAGGAAGGCACA 59.526 50.000 0.00 0.00 42.77 4.57
5386 5796 8.123445 CAAATTGCTTTGCTGTCTATTTATCC 57.877 34.615 0.00 0.00 35.69 2.59
5539 5949 8.970020 TCCTATTTCGGTAAGTTTGTCACTATA 58.030 33.333 0.00 0.00 32.94 1.31
5574 5984 6.659242 CCTTTTAGTTCATGTAACCACTCCAT 59.341 38.462 0.00 0.00 39.03 3.41
5631 6041 2.721090 GCGCAACTCACATCTGTTTTTC 59.279 45.455 0.30 0.00 0.00 2.29
5796 6206 7.873719 TTTTGAAGAGAAAGGTTGTCATGTA 57.126 32.000 0.00 0.00 0.00 2.29
5828 6238 1.187567 ACCATGTTTGCCAAGGAGCC 61.188 55.000 0.00 0.00 35.43 4.70
5833 6243 2.268076 TTTGCCAAGGAGCCGCTTC 61.268 57.895 0.00 0.00 0.00 3.86
5834 6244 2.974692 TTTGCCAAGGAGCCGCTTCA 62.975 55.000 0.34 0.00 0.00 3.02
5842 6256 1.280421 AGGAGCCGCTTCAATTCTTCT 59.720 47.619 0.34 0.00 0.00 2.85
5865 6279 9.886132 TTCTTCTGTTAGTTTTATGATACTCCC 57.114 33.333 0.00 0.00 0.00 4.30
5866 6280 9.268282 TCTTCTGTTAGTTTTATGATACTCCCT 57.732 33.333 0.00 0.00 0.00 4.20
5867 6281 9.535878 CTTCTGTTAGTTTTATGATACTCCCTC 57.464 37.037 0.00 0.00 0.00 4.30
5868 6282 8.019656 TCTGTTAGTTTTATGATACTCCCTCC 57.980 38.462 0.00 0.00 0.00 4.30
5869 6283 6.812998 TGTTAGTTTTATGATACTCCCTCCG 58.187 40.000 0.00 0.00 0.00 4.63
5870 6284 6.608405 TGTTAGTTTTATGATACTCCCTCCGA 59.392 38.462 0.00 0.00 0.00 4.55
5871 6285 7.289317 TGTTAGTTTTATGATACTCCCTCCGAT 59.711 37.037 0.00 0.00 0.00 4.18
5872 6286 6.347859 AGTTTTATGATACTCCCTCCGATC 57.652 41.667 0.00 0.00 0.00 3.69
5873 6287 5.246429 AGTTTTATGATACTCCCTCCGATCC 59.754 44.000 0.00 0.00 0.00 3.36
5874 6288 4.676799 TTATGATACTCCCTCCGATCCT 57.323 45.455 0.00 0.00 0.00 3.24
5875 6289 5.791303 TTATGATACTCCCTCCGATCCTA 57.209 43.478 0.00 0.00 0.00 2.94
5876 6290 4.676799 ATGATACTCCCTCCGATCCTAA 57.323 45.455 0.00 0.00 0.00 2.69
5877 6291 4.464652 TGATACTCCCTCCGATCCTAAA 57.535 45.455 0.00 0.00 0.00 1.85
5878 6292 5.011982 TGATACTCCCTCCGATCCTAAAT 57.988 43.478 0.00 0.00 0.00 1.40
5879 6293 6.148735 TGATACTCCCTCCGATCCTAAATA 57.851 41.667 0.00 0.00 0.00 1.40
5880 6294 6.742756 TGATACTCCCTCCGATCCTAAATAT 58.257 40.000 0.00 0.00 0.00 1.28
5881 6295 7.189794 TGATACTCCCTCCGATCCTAAATATT 58.810 38.462 0.00 0.00 0.00 1.28
5882 6296 7.678598 TGATACTCCCTCCGATCCTAAATATTT 59.321 37.037 5.89 5.89 0.00 1.40
5883 6297 6.115448 ACTCCCTCCGATCCTAAATATTTG 57.885 41.667 11.05 1.40 0.00 2.32
5884 6298 5.607171 ACTCCCTCCGATCCTAAATATTTGT 59.393 40.000 11.05 0.00 0.00 2.83
5885 6299 6.110411 TCCCTCCGATCCTAAATATTTGTC 57.890 41.667 11.05 3.45 0.00 3.18
5886 6300 5.844516 TCCCTCCGATCCTAAATATTTGTCT 59.155 40.000 11.05 0.00 0.00 3.41
5887 6301 6.329197 TCCCTCCGATCCTAAATATTTGTCTT 59.671 38.462 11.05 0.00 0.00 3.01
5888 6302 6.998673 CCCTCCGATCCTAAATATTTGTCTTT 59.001 38.462 11.05 0.00 0.00 2.52
5889 6303 7.502561 CCCTCCGATCCTAAATATTTGTCTTTT 59.497 37.037 11.05 0.00 0.00 2.27
5890 6304 8.903820 CCTCCGATCCTAAATATTTGTCTTTTT 58.096 33.333 11.05 0.00 0.00 1.94
5907 6321 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
5908 6322 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
5924 6338 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
5925 6339 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
5926 6340 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
5927 6341 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
5928 6342 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
5929 6343 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
5930 6344 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
5931 6345 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
5932 6346 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
5933 6347 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
5935 6349 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
5963 6377 9.890629 TTAGAGTGTAGATTCACATATTTTGCT 57.109 29.630 0.00 0.00 40.37 3.91
5964 6378 8.430801 AGAGTGTAGATTCACATATTTTGCTC 57.569 34.615 0.00 0.00 40.37 4.26
5965 6379 7.497249 AGAGTGTAGATTCACATATTTTGCTCC 59.503 37.037 0.00 0.00 40.37 4.70
5966 6380 6.258727 AGTGTAGATTCACATATTTTGCTCCG 59.741 38.462 0.00 0.00 40.37 4.63
5967 6381 6.037172 GTGTAGATTCACATATTTTGCTCCGT 59.963 38.462 0.00 0.00 38.12 4.69
5968 6382 7.223971 GTGTAGATTCACATATTTTGCTCCGTA 59.776 37.037 0.00 0.00 38.12 4.02
5969 6383 7.931407 TGTAGATTCACATATTTTGCTCCGTAT 59.069 33.333 0.00 0.00 0.00 3.06
5970 6384 7.194607 AGATTCACATATTTTGCTCCGTATG 57.805 36.000 0.00 0.00 0.00 2.39
5971 6385 6.767902 AGATTCACATATTTTGCTCCGTATGT 59.232 34.615 0.00 0.00 38.05 2.29
5972 6386 7.931407 AGATTCACATATTTTGCTCCGTATGTA 59.069 33.333 0.00 0.00 36.05 2.29
5973 6387 7.477144 TTCACATATTTTGCTCCGTATGTAG 57.523 36.000 0.00 0.00 36.05 2.74
5974 6388 6.578944 TCACATATTTTGCTCCGTATGTAGT 58.421 36.000 0.00 0.00 36.05 2.73
5975 6389 6.700081 TCACATATTTTGCTCCGTATGTAGTC 59.300 38.462 0.00 0.00 36.05 2.59
5976 6390 6.478673 CACATATTTTGCTCCGTATGTAGTCA 59.521 38.462 0.00 0.00 36.05 3.41
5977 6391 6.479001 ACATATTTTGCTCCGTATGTAGTCAC 59.521 38.462 0.00 0.00 36.35 3.67
5978 6392 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
5979 6393 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
5980 6394 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
5981 6395 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
5982 6396 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
5983 6397 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
5984 6398 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
5985 6399 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
5986 6400 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
5987 6401 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
5988 6402 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
5989 6403 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
5990 6404 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
5991 6405 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
5992 6406 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
5993 6407 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
5994 6408 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
5995 6409 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
5996 6410 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
5997 6411 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
5998 6412 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
5999 6413 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
6000 6414 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
6001 6415 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
6002 6416 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
6015 6429 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
6016 6430 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
6017 6431 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
6018 6432 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
6019 6433 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
6020 6434 4.788679 ACAAATATTTAGGAACGGAGGGG 58.211 43.478 0.00 0.00 0.00 4.79
6021 6435 4.142038 CAAATATTTAGGAACGGAGGGGG 58.858 47.826 0.00 0.00 0.00 5.40
6250 6674 4.698575 CAGGAATACTTGGAGAAGGTAGC 58.301 47.826 0.00 0.00 32.95 3.58
6269 6693 8.674263 AGGTAGCTTTCATGAATCAATAAGAG 57.326 34.615 9.40 2.06 0.00 2.85
6276 6700 7.502120 TTCATGAATCAATAAGAGCTTAGCC 57.498 36.000 3.38 0.00 0.00 3.93
6279 6703 4.141711 TGAATCAATAAGAGCTTAGCCCGT 60.142 41.667 0.00 0.00 0.00 5.28
6281 6705 2.764010 TCAATAAGAGCTTAGCCCGTGA 59.236 45.455 0.00 0.00 0.00 4.35
6284 6708 2.202756 GAGCTTAGCCCGTGACCG 60.203 66.667 0.00 0.00 0.00 4.79
6288 6712 1.153823 CTTAGCCCGTGACCGTCAG 60.154 63.158 0.08 0.00 0.00 3.51
6326 6751 8.045507 TCTCATTGATAACAAGATTCTGCTTCT 58.954 33.333 0.00 0.00 39.46 2.85
6346 6771 6.381481 TTCTTGACGTCTAACTCTTGTACA 57.619 37.500 17.92 0.00 0.00 2.90
6492 6917 2.045536 CTCTGAGGGCCAAGCACC 60.046 66.667 6.18 0.00 28.43 5.01
6493 6918 2.853542 TCTGAGGGCCAAGCACCA 60.854 61.111 6.18 0.00 28.43 4.17
6494 6919 2.674380 CTGAGGGCCAAGCACCAC 60.674 66.667 6.18 0.00 28.43 4.16
6497 6922 1.973812 GAGGGCCAAGCACCACTTC 60.974 63.158 6.18 0.00 36.04 3.01
6525 6950 4.558860 GGTTACGAATCTACTACGCGTTTT 59.441 41.667 20.78 7.39 36.51 2.43
6551 6976 4.630644 TTCTCTTTTGCTCCATCTGACT 57.369 40.909 0.00 0.00 0.00 3.41
6588 7013 2.174210 AGTGATCTTGTCATCCCATGGG 59.826 50.000 26.30 26.30 39.48 4.00
6604 7029 4.584743 CCCATGGGTTATTCTTTTCCTAGC 59.415 45.833 23.93 0.00 0.00 3.42
6609 7034 7.849322 TGGGTTATTCTTTTCCTAGCTTTTT 57.151 32.000 0.00 0.00 0.00 1.94
6747 7173 1.243902 GAGAGGGTCCATCTCTAGCG 58.756 60.000 23.46 0.00 41.23 4.26
6790 7216 1.815003 CCACAGGAGCAGTTCAATTCC 59.185 52.381 0.00 0.00 0.00 3.01
6901 7380 7.517614 TGCAATTCCTGTGTTCATAGTTTTA 57.482 32.000 0.00 0.00 0.00 1.52
6902 7381 8.121305 TGCAATTCCTGTGTTCATAGTTTTAT 57.879 30.769 0.00 0.00 0.00 1.40
6948 7499 1.378911 CATTGGCAGCCACCTAGCA 60.379 57.895 15.89 0.00 30.78 3.49
6956 7507 2.491693 GCAGCCACCTAGCATTTTAACA 59.508 45.455 0.00 0.00 34.23 2.41
6967 7518 8.909923 ACCTAGCATTTTAACAAAACTACTGTT 58.090 29.630 0.00 0.00 40.13 3.16
6985 7536 0.874390 TTTCCGATCACTTGCTGCAC 59.126 50.000 0.00 0.00 0.00 4.57
6997 7548 5.048782 TCACTTGCTGCACTTTAGTTTATGG 60.049 40.000 0.00 0.00 0.00 2.74
7002 7553 4.734695 GCTGCACTTTAGTTTATGGATGGC 60.735 45.833 0.00 0.00 0.00 4.40
7003 7554 4.599041 TGCACTTTAGTTTATGGATGGCT 58.401 39.130 0.00 0.00 0.00 4.75
7004 7555 4.640201 TGCACTTTAGTTTATGGATGGCTC 59.360 41.667 0.00 0.00 0.00 4.70
7005 7556 4.884164 GCACTTTAGTTTATGGATGGCTCT 59.116 41.667 0.00 0.00 0.00 4.09
7006 7557 6.055588 GCACTTTAGTTTATGGATGGCTCTA 58.944 40.000 0.00 0.00 0.00 2.43
7007 7558 6.712547 GCACTTTAGTTTATGGATGGCTCTAT 59.287 38.462 0.00 0.00 0.00 1.98
7008 7559 7.229506 GCACTTTAGTTTATGGATGGCTCTATT 59.770 37.037 0.00 0.00 0.00 1.73
7009 7560 8.562892 CACTTTAGTTTATGGATGGCTCTATTG 58.437 37.037 0.00 0.00 0.00 1.90
7010 7561 7.229506 ACTTTAGTTTATGGATGGCTCTATTGC 59.770 37.037 0.00 0.00 0.00 3.56
7021 7572 2.888594 GCTCTATTGCCTTGTCGTACA 58.111 47.619 0.00 0.00 0.00 2.90
7022 7573 3.259064 GCTCTATTGCCTTGTCGTACAA 58.741 45.455 0.00 0.00 36.54 2.41
7034 7585 4.099380 TGTCGTACAAGAATCGTATGCA 57.901 40.909 0.00 0.00 0.00 3.96
7035 7586 4.678622 TGTCGTACAAGAATCGTATGCAT 58.321 39.130 3.79 3.79 0.00 3.96
7036 7587 4.502645 TGTCGTACAAGAATCGTATGCATG 59.497 41.667 10.16 0.00 0.00 4.06
7037 7588 4.048504 TCGTACAAGAATCGTATGCATGG 58.951 43.478 10.16 0.84 0.00 3.66
7038 7589 3.802139 CGTACAAGAATCGTATGCATGGT 59.198 43.478 10.16 0.00 0.00 3.55
7039 7590 4.318050 CGTACAAGAATCGTATGCATGGTG 60.318 45.833 10.16 0.00 0.00 4.17
7040 7591 3.609853 ACAAGAATCGTATGCATGGTGT 58.390 40.909 10.16 0.00 0.00 4.16
7041 7592 4.009675 ACAAGAATCGTATGCATGGTGTT 58.990 39.130 10.16 0.00 0.00 3.32
7042 7593 4.142622 ACAAGAATCGTATGCATGGTGTTG 60.143 41.667 10.16 7.24 0.00 3.33
7043 7594 3.609853 AGAATCGTATGCATGGTGTTGT 58.390 40.909 10.16 0.00 0.00 3.32
7044 7595 4.765273 AGAATCGTATGCATGGTGTTGTA 58.235 39.130 10.16 0.00 0.00 2.41
7045 7596 5.368145 AGAATCGTATGCATGGTGTTGTAT 58.632 37.500 10.16 0.00 0.00 2.29
7046 7597 5.237127 AGAATCGTATGCATGGTGTTGTATG 59.763 40.000 10.16 0.00 0.00 2.39
7052 7603 3.004024 GCATGGTGTTGTATGCATAGC 57.996 47.619 6.67 0.00 46.72 2.97
7053 7604 2.358582 GCATGGTGTTGTATGCATAGCA 59.641 45.455 6.67 3.50 46.72 3.49
7054 7605 3.181488 GCATGGTGTTGTATGCATAGCAA 60.181 43.478 6.67 11.44 46.72 3.91
7055 7606 4.353737 CATGGTGTTGTATGCATAGCAAC 58.646 43.478 27.43 27.43 43.62 4.17
7056 7607 3.416156 TGGTGTTGTATGCATAGCAACA 58.584 40.909 30.13 30.13 46.65 3.33
7059 7610 4.683501 TGTTGTATGCATAGCAACACTG 57.316 40.909 30.13 0.00 44.82 3.66
7071 7622 3.859745 GCAACACTGCTTTTTAAAGGC 57.140 42.857 4.81 4.81 45.74 4.35
7072 7623 2.218530 GCAACACTGCTTTTTAAAGGCG 59.781 45.455 7.27 5.03 45.74 5.52
7073 7624 3.443976 CAACACTGCTTTTTAAAGGCGT 58.556 40.909 7.27 5.59 36.53 5.68
7074 7625 3.349488 ACACTGCTTTTTAAAGGCGTC 57.651 42.857 7.27 0.00 36.53 5.19
7075 7626 2.949644 ACACTGCTTTTTAAAGGCGTCT 59.050 40.909 7.27 0.00 36.53 4.18
7076 7627 3.243068 ACACTGCTTTTTAAAGGCGTCTG 60.243 43.478 7.27 4.87 36.53 3.51
7077 7628 3.003275 CACTGCTTTTTAAAGGCGTCTGA 59.997 43.478 7.27 0.00 36.53 3.27
7078 7629 3.251004 ACTGCTTTTTAAAGGCGTCTGAG 59.749 43.478 7.27 1.64 36.53 3.35
7079 7630 2.031157 TGCTTTTTAAAGGCGTCTGAGC 60.031 45.455 7.27 0.00 36.53 4.26
7080 7631 2.226674 GCTTTTTAAAGGCGTCTGAGCT 59.773 45.455 0.00 0.00 36.53 4.09
7081 7632 3.304726 GCTTTTTAAAGGCGTCTGAGCTT 60.305 43.478 0.00 0.00 36.53 3.74
7082 7633 4.793028 GCTTTTTAAAGGCGTCTGAGCTTT 60.793 41.667 0.00 0.00 38.08 3.51
7083 7634 4.911514 TTTTAAAGGCGTCTGAGCTTTT 57.088 36.364 0.00 11.57 45.98 2.27
7084 7635 4.911514 TTTAAAGGCGTCTGAGCTTTTT 57.088 36.364 11.92 9.21 42.51 1.94
7085 7636 6.380095 TTTTAAAGGCGTCTGAGCTTTTTA 57.620 33.333 11.92 8.56 42.51 1.52
7086 7637 6.380095 TTTAAAGGCGTCTGAGCTTTTTAA 57.620 33.333 11.92 12.05 42.51 1.52
7087 7638 4.911514 AAAGGCGTCTGAGCTTTTTAAA 57.088 36.364 0.00 0.00 42.51 1.52
7088 7639 4.489679 AAGGCGTCTGAGCTTTTTAAAG 57.510 40.909 0.00 0.00 32.30 1.85
7237 7789 4.820716 GCTGCTAGAGATCCACATCAAAAT 59.179 41.667 0.00 0.00 0.00 1.82
7238 7790 5.994054 GCTGCTAGAGATCCACATCAAAATA 59.006 40.000 0.00 0.00 0.00 1.40
7239 7791 6.484643 GCTGCTAGAGATCCACATCAAAATAA 59.515 38.462 0.00 0.00 0.00 1.40
7240 7792 7.012704 GCTGCTAGAGATCCACATCAAAATAAA 59.987 37.037 0.00 0.00 0.00 1.40
7299 7854 6.231211 ACAACCGTATGACTGAAGAAATCTT 58.769 36.000 0.00 0.00 39.23 2.40
7407 7962 2.056906 GACCACCTCAGCCACCTTGT 62.057 60.000 0.00 0.00 0.00 3.16
7449 8023 2.890474 CTGCACGGCGGATGGTAC 60.890 66.667 13.24 0.00 37.02 3.34
7455 8029 2.513897 GGCGGATGGTACCTGCAC 60.514 66.667 14.36 1.78 33.60 4.57
7463 8037 1.518572 GGTACCTGCACGACGGATG 60.519 63.158 4.06 0.00 0.00 3.51
7464 8038 1.509463 GTACCTGCACGACGGATGA 59.491 57.895 0.00 0.00 0.00 2.92
7466 8040 0.821517 TACCTGCACGACGGATGAAT 59.178 50.000 0.00 0.00 0.00 2.57
7480 8054 0.833287 ATGAATGAGAGGTGGGACGG 59.167 55.000 0.00 0.00 0.00 4.79
7484 8058 3.148279 GAGAGGTGGGACGGCGAT 61.148 66.667 16.62 0.00 0.00 4.58
7495 8069 0.739813 GACGGCGATGTAGGCAAAGT 60.740 55.000 16.62 0.00 36.37 2.66
7507 8081 4.025401 CAAAGTGGCGCGGTGACC 62.025 66.667 8.83 0.00 0.00 4.02
7525 8099 3.474570 GGGTGGAGCAGCGGAGAT 61.475 66.667 0.00 0.00 32.08 2.75
7526 8100 2.107953 GGTGGAGCAGCGGAGATC 59.892 66.667 0.00 0.00 0.00 2.75
7527 8101 2.107953 GTGGAGCAGCGGAGATCC 59.892 66.667 4.50 4.50 44.25 3.36
7537 8111 3.635510 GGAGATCCGACAAGGCCT 58.364 61.111 0.00 0.00 40.77 5.19
7538 8112 1.908483 GGAGATCCGACAAGGCCTT 59.092 57.895 13.78 13.78 40.77 4.35
7539 8113 0.462759 GGAGATCCGACAAGGCCTTG 60.463 60.000 38.30 38.30 45.58 3.61
7540 8114 1.078143 AGATCCGACAAGGCCTTGC 60.078 57.895 39.52 30.15 44.03 4.01
7563 8137 0.453390 GAGACCGGGGTAGTACAACG 59.547 60.000 6.32 5.81 0.00 4.10
7572 8146 2.699768 TAGTACAACGACGGGCCGG 61.700 63.158 31.78 16.15 0.00 6.13
7591 8165 1.751927 CCAGGGAGGAAGTGCATGC 60.752 63.158 11.82 11.82 41.22 4.06
7656 8230 1.488705 TAGGTGGGCCTGAGGTGTTG 61.489 60.000 4.53 0.00 46.47 3.33
7665 8239 2.613223 GCCTGAGGTGTTGAAGTCCTAC 60.613 54.545 0.00 0.00 0.00 3.18
7682 8262 5.188751 AGTCCTACAAGAAGAGGAAGAATGG 59.811 44.000 0.00 0.00 43.52 3.16
7701 8281 2.288666 GGCGATAGATGCTCCAACAAA 58.711 47.619 0.00 0.00 39.76 2.83
7707 8290 3.515602 AGATGCTCCAACAAAACCTCT 57.484 42.857 0.00 0.00 0.00 3.69
7712 8295 3.244561 TGCTCCAACAAAACCTCTAGGAG 60.245 47.826 2.23 0.00 43.04 3.69
7723 8306 1.739750 CTCTAGGAGGGGAATGGCAT 58.260 55.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 1.446907 CGAAGCTCCATTGCAACTCT 58.553 50.000 0.00 0.00 34.99 3.24
235 512 2.745884 CCATTGCAACTCCGGCGA 60.746 61.111 9.30 0.00 0.00 5.54
503 791 1.073216 CACGGTAGCAGCGAGTCAAG 61.073 60.000 13.25 0.00 42.41 3.02
580 879 9.793259 ATAAGCCGGATGATTTCTTAGAAAATA 57.207 29.630 11.63 4.33 0.00 1.40
664 964 4.919774 AAAGTTGGGTTGGGTTCTTTTT 57.080 36.364 0.00 0.00 0.00 1.94
669 969 2.285083 GCAAAAAGTTGGGTTGGGTTC 58.715 47.619 0.00 0.00 35.10 3.62
677 977 2.492088 GGTAGCTAGGCAAAAAGTTGGG 59.508 50.000 0.00 0.00 35.10 4.12
714 1014 6.801718 AAAGTTAGGTAAGCCAAAAAGGTT 57.198 33.333 0.00 0.00 40.61 3.50
715 1015 6.460537 CGAAAAGTTAGGTAAGCCAAAAAGGT 60.461 38.462 0.00 0.00 40.61 3.50
716 1016 5.918576 CGAAAAGTTAGGTAAGCCAAAAAGG 59.081 40.000 0.00 0.00 41.84 3.11
717 1017 6.731164 TCGAAAAGTTAGGTAAGCCAAAAAG 58.269 36.000 0.00 0.00 37.19 2.27
790 1093 0.951040 GGTCTGTCCTTTGCCTGTCG 60.951 60.000 0.00 0.00 0.00 4.35
823 1126 3.801997 CCTGGATCGGCAGGGCTT 61.802 66.667 9.54 0.00 35.04 4.35
950 1254 4.446745 GGAGTAAATTTTATACCGGGGGCT 60.447 45.833 6.32 0.00 0.00 5.19
1442 1763 2.380410 CGCTAGCGGTGGTCACAAC 61.380 63.158 29.29 0.00 35.56 3.32
1600 1921 6.070995 AGTCAACAAAACCATCGATCCTACTA 60.071 38.462 0.00 0.00 0.00 1.82
1601 1922 4.935808 GTCAACAAAACCATCGATCCTACT 59.064 41.667 0.00 0.00 0.00 2.57
1602 1923 4.935808 AGTCAACAAAACCATCGATCCTAC 59.064 41.667 0.00 0.00 0.00 3.18
1610 1931 6.695713 GTCAACCTTAAGTCAACAAAACCATC 59.304 38.462 0.97 0.00 0.00 3.51
1687 2008 7.453402 ATGAATTCATCTATCGGGGCACCAA 62.453 44.000 15.36 0.00 41.65 3.67
1696 2017 6.037500 ACACACAACCATGAATTCATCTATCG 59.962 38.462 18.16 6.83 33.61 2.92
1702 2023 4.341806 ACACACACACAACCATGAATTCAT 59.658 37.500 15.36 15.36 36.96 2.57
1972 2350 7.875554 TGCTACTTATCAGTGTGTTGAAACATA 59.124 33.333 0.00 0.00 36.48 2.29
1973 2351 6.710295 TGCTACTTATCAGTGTGTTGAAACAT 59.290 34.615 0.00 0.00 36.48 2.71
1974 2352 6.052360 TGCTACTTATCAGTGTGTTGAAACA 58.948 36.000 0.00 0.00 34.06 2.83
1975 2353 6.539649 TGCTACTTATCAGTGTGTTGAAAC 57.460 37.500 0.00 0.00 34.06 2.78
1976 2354 6.989759 TCTTGCTACTTATCAGTGTGTTGAAA 59.010 34.615 0.00 0.00 34.06 2.69
1977 2355 6.521162 TCTTGCTACTTATCAGTGTGTTGAA 58.479 36.000 0.00 0.00 34.06 2.69
1978 2356 6.096673 TCTTGCTACTTATCAGTGTGTTGA 57.903 37.500 0.00 0.00 34.06 3.18
1979 2357 5.163913 GCTCTTGCTACTTATCAGTGTGTTG 60.164 44.000 0.00 0.00 34.06 3.33
1980 2358 4.932200 GCTCTTGCTACTTATCAGTGTGTT 59.068 41.667 0.00 0.00 34.06 3.32
1981 2359 4.021104 TGCTCTTGCTACTTATCAGTGTGT 60.021 41.667 0.00 0.00 40.48 3.72
1982 2360 4.498241 TGCTCTTGCTACTTATCAGTGTG 58.502 43.478 0.00 0.00 40.48 3.82
1983 2361 4.808414 TGCTCTTGCTACTTATCAGTGT 57.192 40.909 0.00 0.00 40.48 3.55
1984 2362 5.583854 ACAATGCTCTTGCTACTTATCAGTG 59.416 40.000 0.00 0.00 40.48 3.66
1985 2363 5.738909 ACAATGCTCTTGCTACTTATCAGT 58.261 37.500 0.26 0.00 40.48 3.41
1986 2364 6.674694 AACAATGCTCTTGCTACTTATCAG 57.325 37.500 0.26 0.00 40.48 2.90
1987 2365 7.362056 GGAAAACAATGCTCTTGCTACTTATCA 60.362 37.037 0.26 0.00 40.48 2.15
1988 2366 6.969473 GGAAAACAATGCTCTTGCTACTTATC 59.031 38.462 0.26 0.00 40.48 1.75
1989 2367 6.127619 GGGAAAACAATGCTCTTGCTACTTAT 60.128 38.462 0.26 0.00 40.48 1.73
1990 2368 5.183140 GGGAAAACAATGCTCTTGCTACTTA 59.817 40.000 0.26 0.00 40.48 2.24
1991 2369 4.021981 GGGAAAACAATGCTCTTGCTACTT 60.022 41.667 0.26 0.00 40.48 2.24
1992 2370 3.507622 GGGAAAACAATGCTCTTGCTACT 59.492 43.478 0.26 0.00 40.48 2.57
1993 2371 3.255642 TGGGAAAACAATGCTCTTGCTAC 59.744 43.478 0.26 0.00 40.48 3.58
1994 2372 3.495331 TGGGAAAACAATGCTCTTGCTA 58.505 40.909 0.26 0.00 40.48 3.49
1995 2373 2.318908 TGGGAAAACAATGCTCTTGCT 58.681 42.857 0.26 0.00 40.48 3.91
1996 2374 2.818130 TGGGAAAACAATGCTCTTGC 57.182 45.000 0.26 0.00 40.20 4.01
1997 2375 4.524316 TCATGGGAAAACAATGCTCTTG 57.476 40.909 0.00 0.00 0.00 3.02
1998 2376 4.773674 TCATCATGGGAAAACAATGCTCTT 59.226 37.500 0.00 0.00 0.00 2.85
1999 2377 4.346730 TCATCATGGGAAAACAATGCTCT 58.653 39.130 0.00 0.00 0.00 4.09
2000 2378 4.724074 TCATCATGGGAAAACAATGCTC 57.276 40.909 0.00 0.00 0.00 4.26
2001 2379 4.960469 AGATCATCATGGGAAAACAATGCT 59.040 37.500 0.00 0.00 0.00 3.79
2002 2380 5.272283 AGATCATCATGGGAAAACAATGC 57.728 39.130 0.00 0.00 0.00 3.56
2003 2381 8.418662 ACATTAGATCATCATGGGAAAACAATG 58.581 33.333 0.00 0.00 0.00 2.82
2004 2382 8.543293 ACATTAGATCATCATGGGAAAACAAT 57.457 30.769 0.00 0.00 0.00 2.71
2005 2383 7.959658 ACATTAGATCATCATGGGAAAACAA 57.040 32.000 0.00 0.00 0.00 2.83
2006 2384 7.959658 AACATTAGATCATCATGGGAAAACA 57.040 32.000 0.00 0.00 0.00 2.83
2064 2442 3.810579 AGCAAGAGAGCTCGAAGTG 57.189 52.632 8.37 6.72 42.18 3.16
2092 2470 1.693083 GATGGTTGTGTACGCGAGCC 61.693 60.000 15.93 13.32 0.00 4.70
2100 2478 6.707440 ACAAAACAATCAGATGGTTGTGTA 57.293 33.333 21.15 0.00 40.27 2.90
2406 2798 9.294030 CTGCATTCATGATTAAACCTTTAGAAC 57.706 33.333 0.00 0.00 0.00 3.01
2414 2806 7.859377 CACTATCACTGCATTCATGATTAAACC 59.141 37.037 0.00 0.00 34.86 3.27
2420 2812 7.677892 AGTATCACTATCACTGCATTCATGAT 58.322 34.615 0.00 7.71 36.95 2.45
2438 2830 6.591261 GTTCGGAGAAACTTTCAAGTATCAC 58.409 40.000 4.34 0.00 45.90 3.06
2522 2914 6.128254 GGCCAGAGTTTTAAGTATCAGTGTTC 60.128 42.308 0.00 0.00 0.00 3.18
2934 3329 5.579511 AGAACACCGATTTAGGATTAACACG 59.420 40.000 0.00 0.00 34.73 4.49
2937 3332 8.265165 AGAAAGAACACCGATTTAGGATTAAC 57.735 34.615 0.00 0.00 34.73 2.01
2951 3346 4.398044 TGACACCTTCAAAGAAAGAACACC 59.602 41.667 0.00 0.00 0.00 4.16
3060 3455 6.203723 GGATCCAGAATTAAGGTGAAGAATCG 59.796 42.308 6.95 0.00 0.00 3.34
3317 3712 7.340232 ACTCACAAATGCAACCACAAGATATAT 59.660 33.333 0.00 0.00 0.00 0.86
3318 3713 6.658816 ACTCACAAATGCAACCACAAGATATA 59.341 34.615 0.00 0.00 0.00 0.86
3506 3903 3.567530 CTTCTCAGCAGATAGAGCATCG 58.432 50.000 0.00 0.00 42.67 3.84
3555 3952 7.761249 ACAAGAAAGTATGCCAAAATAGAATGC 59.239 33.333 0.00 0.00 0.00 3.56
3698 4096 2.402564 CACCCTATGTGGACCTCAGAT 58.597 52.381 2.23 0.00 41.52 2.90
3852 4252 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
3853 4253 3.959449 GAGTATTTAGGAACGGAGGGAGT 59.041 47.826 0.00 0.00 0.00 3.85
3854 4254 3.321396 GGAGTATTTAGGAACGGAGGGAG 59.679 52.174 0.00 0.00 0.00 4.30
3855 4255 3.303049 GGAGTATTTAGGAACGGAGGGA 58.697 50.000 0.00 0.00 0.00 4.20
3856 4256 2.367894 GGGAGTATTTAGGAACGGAGGG 59.632 54.545 0.00 0.00 0.00 4.30
3857 4257 3.306613 AGGGAGTATTTAGGAACGGAGG 58.693 50.000 0.00 0.00 0.00 4.30
3858 4258 4.038162 CAGAGGGAGTATTTAGGAACGGAG 59.962 50.000 0.00 0.00 0.00 4.63
3859 4259 3.958798 CAGAGGGAGTATTTAGGAACGGA 59.041 47.826 0.00 0.00 0.00 4.69
3860 4260 3.705072 ACAGAGGGAGTATTTAGGAACGG 59.295 47.826 0.00 0.00 0.00 4.44
3861 4261 6.461110 TTACAGAGGGAGTATTTAGGAACG 57.539 41.667 0.00 0.00 0.00 3.95
3862 4262 7.849160 AGTTTACAGAGGGAGTATTTAGGAAC 58.151 38.462 0.00 0.00 0.00 3.62
3863 4263 9.725206 ATAGTTTACAGAGGGAGTATTTAGGAA 57.275 33.333 0.00 0.00 0.00 3.36
3871 4271 9.517868 GCTCTTATATAGTTTACAGAGGGAGTA 57.482 37.037 8.33 0.00 0.00 2.59
3872 4272 8.005388 TGCTCTTATATAGTTTACAGAGGGAGT 58.995 37.037 8.33 0.00 0.00 3.85
3926 4326 9.819754 ACTTATACTCCCTCCGTAAACTAATAT 57.180 33.333 0.00 0.00 0.00 1.28
3927 4327 9.289782 GACTTATACTCCCTCCGTAAACTAATA 57.710 37.037 0.00 0.00 0.00 0.98
3928 4328 8.003629 AGACTTATACTCCCTCCGTAAACTAAT 58.996 37.037 0.00 0.00 0.00 1.73
3929 4329 7.349598 AGACTTATACTCCCTCCGTAAACTAA 58.650 38.462 0.00 0.00 0.00 2.24
3930 4330 6.904626 AGACTTATACTCCCTCCGTAAACTA 58.095 40.000 0.00 0.00 0.00 2.24
3931 4331 5.764432 AGACTTATACTCCCTCCGTAAACT 58.236 41.667 0.00 0.00 0.00 2.66
3932 4332 6.462552 AAGACTTATACTCCCTCCGTAAAC 57.537 41.667 0.00 0.00 0.00 2.01
3933 4333 6.894103 AGAAAGACTTATACTCCCTCCGTAAA 59.106 38.462 0.00 0.00 0.00 2.01
3934 4334 6.430007 AGAAAGACTTATACTCCCTCCGTAA 58.570 40.000 0.00 0.00 0.00 3.18
3935 4335 6.011122 AGAAAGACTTATACTCCCTCCGTA 57.989 41.667 0.00 0.00 0.00 4.02
3936 4336 4.869451 AGAAAGACTTATACTCCCTCCGT 58.131 43.478 0.00 0.00 0.00 4.69
3937 4337 6.297582 TCTAGAAAGACTTATACTCCCTCCG 58.702 44.000 0.00 0.00 0.00 4.63
3938 4338 7.446319 GTCTCTAGAAAGACTTATACTCCCTCC 59.554 44.444 5.16 0.00 42.01 4.30
3939 4339 8.387190 GTCTCTAGAAAGACTTATACTCCCTC 57.613 42.308 5.16 0.00 42.01 4.30
3951 4351 5.186021 TCCACATTGGAGTCTCTAGAAAGAC 59.814 44.000 4.36 4.36 42.67 3.01
3952 4352 5.333581 TCCACATTGGAGTCTCTAGAAAGA 58.666 41.667 0.00 0.00 42.67 2.52
3953 4353 5.186797 AGTCCACATTGGAGTCTCTAGAAAG 59.813 44.000 0.00 0.00 46.94 2.62
3954 4354 5.087323 AGTCCACATTGGAGTCTCTAGAAA 58.913 41.667 0.00 0.00 46.94 2.52
3955 4355 4.678256 AGTCCACATTGGAGTCTCTAGAA 58.322 43.478 0.00 0.00 46.94 2.10
3956 4356 4.323569 AGTCCACATTGGAGTCTCTAGA 57.676 45.455 0.00 0.00 46.94 2.43
3957 4357 4.950475 TGTAGTCCACATTGGAGTCTCTAG 59.050 45.833 5.80 0.00 46.94 2.43
3958 4358 4.930696 TGTAGTCCACATTGGAGTCTCTA 58.069 43.478 5.80 0.00 46.94 2.43
3959 4359 3.779444 TGTAGTCCACATTGGAGTCTCT 58.221 45.455 5.80 0.00 46.94 3.10
3960 4360 4.744795 ATGTAGTCCACATTGGAGTCTC 57.255 45.455 5.80 2.80 46.94 3.36
3961 4361 4.098044 CGTATGTAGTCCACATTGGAGTCT 59.902 45.833 5.80 0.00 46.94 3.24
3962 4362 4.360563 CGTATGTAGTCCACATTGGAGTC 58.639 47.826 5.80 0.37 46.94 3.36
3965 4365 3.367321 TCCGTATGTAGTCCACATTGGA 58.633 45.455 6.85 6.85 46.01 3.53
3966 4366 3.717707 CTCCGTATGTAGTCCACATTGG 58.282 50.000 0.00 0.00 46.01 3.16
3967 4367 3.123804 GCTCCGTATGTAGTCCACATTG 58.876 50.000 0.00 0.00 46.01 2.82
3968 4368 2.764010 TGCTCCGTATGTAGTCCACATT 59.236 45.455 0.00 0.00 46.01 2.71
3970 4370 1.842052 TGCTCCGTATGTAGTCCACA 58.158 50.000 0.00 0.00 42.69 4.17
3971 4371 2.953466 TTGCTCCGTATGTAGTCCAC 57.047 50.000 0.00 0.00 0.00 4.02
3972 4372 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
3973 4373 5.156804 CAATTTTGCTCCGTATGTAGTCC 57.843 43.478 0.00 0.00 0.00 3.85
3988 4388 1.715519 CAGAAACGAGCGGCAATTTTG 59.284 47.619 1.45 0.00 0.00 2.44
3989 4389 1.336755 ACAGAAACGAGCGGCAATTTT 59.663 42.857 1.45 0.00 0.00 1.82
3990 4390 0.951558 ACAGAAACGAGCGGCAATTT 59.048 45.000 1.45 0.00 0.00 1.82
3991 4391 1.463444 GTACAGAAACGAGCGGCAATT 59.537 47.619 1.45 0.00 0.00 2.32
3992 4392 1.076332 GTACAGAAACGAGCGGCAAT 58.924 50.000 1.45 0.00 0.00 3.56
3993 4393 0.249531 TGTACAGAAACGAGCGGCAA 60.250 50.000 1.45 0.00 0.00 4.52
3994 4394 0.249531 TTGTACAGAAACGAGCGGCA 60.250 50.000 1.45 0.00 0.00 5.69
3995 4395 0.863144 TTTGTACAGAAACGAGCGGC 59.137 50.000 0.00 0.00 0.00 6.53
3996 4396 3.185594 TGAATTTGTACAGAAACGAGCGG 59.814 43.478 0.00 0.00 0.00 5.52
3997 4397 4.383774 TGAATTTGTACAGAAACGAGCG 57.616 40.909 0.00 0.00 0.00 5.03
4170 4570 3.313526 GCATATACAACAAGCAGGGACAG 59.686 47.826 0.00 0.00 0.00 3.51
4371 4771 6.699575 ATGGCAAGATAAGGTTACATGAAC 57.300 37.500 0.00 0.00 37.31 3.18
4436 4836 2.134789 ACCCCATGATTCTTGTCTGC 57.865 50.000 0.00 0.00 0.00 4.26
4752 5162 1.882623 GCCCAAGGTGAAAGTTGAGAG 59.117 52.381 0.00 0.00 0.00 3.20
4826 5236 5.940470 GTGGGATTCTGTGAATTAACTGAGT 59.060 40.000 3.04 0.68 30.84 3.41
5087 5497 5.460419 GCATACCAAACGTTTGTTCATTTCA 59.540 36.000 32.63 9.27 37.31 2.69
5175 5585 5.948162 ACATTATGAGCTCACAGAACCATTT 59.052 36.000 20.97 0.92 0.00 2.32
5209 5619 3.758554 GTGCCTTCCTTCTGCAAGATTAA 59.241 43.478 0.00 0.00 46.36 1.40
5232 5642 7.288810 TGCATTGAACTTCTTTCCTTTGTAT 57.711 32.000 0.00 0.00 32.58 2.29
5386 5796 4.843220 ACCTGAAATCAACAGCTCAAAG 57.157 40.909 0.00 0.00 34.47 2.77
5631 6041 3.464907 GGTCATCATGGACTGATCACAG 58.535 50.000 0.00 0.00 42.91 3.66
5774 6184 8.463930 AAATACATGACAACCTTTCTCTTCAA 57.536 30.769 0.00 0.00 0.00 2.69
5796 6206 6.266558 TGGCAAACATGGTTACTAGTTGAAAT 59.733 34.615 0.00 0.00 0.00 2.17
5828 6238 6.473397 ACTAACAGAAGAAGAATTGAAGCG 57.527 37.500 0.00 0.00 0.00 4.68
5842 6256 8.483758 GGAGGGAGTATCATAAAACTAACAGAA 58.516 37.037 0.00 0.00 36.25 3.02
5859 6273 6.785963 ACAAATATTTAGGATCGGAGGGAGTA 59.214 38.462 0.00 0.00 0.00 2.59
5860 6274 5.607171 ACAAATATTTAGGATCGGAGGGAGT 59.393 40.000 0.00 0.00 0.00 3.85
5861 6275 6.014156 AGACAAATATTTAGGATCGGAGGGAG 60.014 42.308 0.00 0.00 0.00 4.30
5862 6276 5.844516 AGACAAATATTTAGGATCGGAGGGA 59.155 40.000 0.00 0.00 0.00 4.20
5863 6277 6.115448 AGACAAATATTTAGGATCGGAGGG 57.885 41.667 0.00 0.00 0.00 4.30
5864 6278 8.451908 AAAAGACAAATATTTAGGATCGGAGG 57.548 34.615 0.00 0.00 0.00 4.30
5881 6295 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
5882 6296 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
5886 6300 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
5887 6301 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
5888 6302 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
5889 6303 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
5890 6304 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
5891 6305 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
5892 6306 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
5893 6307 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
5894 6308 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
5895 6309 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
5896 6310 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
5897 6311 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
5898 6312 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
5899 6313 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
5900 6314 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
5901 6315 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
5902 6316 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
5903 6317 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
5904 6318 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
5905 6319 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
5906 6320 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
5907 6321 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
5909 6323 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
5937 6351 9.890629 AGCAAAATATGTGAATCTACACTCTAA 57.109 29.630 0.00 0.00 40.87 2.10
5938 6352 9.534565 GAGCAAAATATGTGAATCTACACTCTA 57.465 33.333 0.00 0.00 40.87 2.43
5939 6353 7.497249 GGAGCAAAATATGTGAATCTACACTCT 59.503 37.037 0.00 0.00 40.87 3.24
5940 6354 7.517417 CGGAGCAAAATATGTGAATCTACACTC 60.517 40.741 0.00 0.00 40.87 3.51
5941 6355 6.258727 CGGAGCAAAATATGTGAATCTACACT 59.741 38.462 0.00 0.00 40.87 3.55
5942 6356 6.037172 ACGGAGCAAAATATGTGAATCTACAC 59.963 38.462 0.00 0.00 40.68 2.90
5943 6357 6.112734 ACGGAGCAAAATATGTGAATCTACA 58.887 36.000 0.00 0.00 34.63 2.74
5944 6358 6.604735 ACGGAGCAAAATATGTGAATCTAC 57.395 37.500 0.00 0.00 0.00 2.59
5945 6359 7.931407 ACATACGGAGCAAAATATGTGAATCTA 59.069 33.333 3.70 0.00 36.99 1.98
5946 6360 6.767902 ACATACGGAGCAAAATATGTGAATCT 59.232 34.615 3.70 0.00 36.99 2.40
5947 6361 6.959361 ACATACGGAGCAAAATATGTGAATC 58.041 36.000 3.70 0.00 36.99 2.52
5948 6362 6.942532 ACATACGGAGCAAAATATGTGAAT 57.057 33.333 3.70 0.00 36.99 2.57
5949 6363 7.045416 ACTACATACGGAGCAAAATATGTGAA 58.955 34.615 11.70 0.00 38.42 3.18
5950 6364 6.578944 ACTACATACGGAGCAAAATATGTGA 58.421 36.000 11.70 0.44 38.42 3.58
5951 6365 6.478673 TGACTACATACGGAGCAAAATATGTG 59.521 38.462 11.70 6.56 38.42 3.21
5952 6366 6.479001 GTGACTACATACGGAGCAAAATATGT 59.521 38.462 8.26 8.26 40.47 2.29
5953 6367 6.701841 AGTGACTACATACGGAGCAAAATATG 59.298 38.462 0.00 0.00 0.00 1.78
5954 6368 6.817184 AGTGACTACATACGGAGCAAAATAT 58.183 36.000 0.00 0.00 0.00 1.28
5955 6369 6.216801 AGTGACTACATACGGAGCAAAATA 57.783 37.500 0.00 0.00 0.00 1.40
5956 6370 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
5957 6371 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
5958 6372 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
5959 6373 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
5960 6374 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
5961 6375 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
5962 6376 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
5963 6377 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
5964 6378 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
5965 6379 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
5966 6380 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
5968 6382 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
5969 6383 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
5970 6384 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
5971 6385 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
5972 6386 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
5973 6387 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
5974 6388 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
5975 6389 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
5976 6390 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
5989 6403 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
5990 6404 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
5991 6405 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
5992 6406 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
5993 6407 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
5994 6408 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
5995 6409 6.120220 CCCTCCGTTCCTAAATATTTGTCTT 58.880 40.000 11.05 0.00 0.00 3.01
5996 6410 5.397559 CCCCTCCGTTCCTAAATATTTGTCT 60.398 44.000 11.05 0.00 0.00 3.41
5997 6411 4.820173 CCCCTCCGTTCCTAAATATTTGTC 59.180 45.833 11.05 0.00 0.00 3.18
5998 6412 4.385977 CCCCCTCCGTTCCTAAATATTTGT 60.386 45.833 11.05 0.00 0.00 2.83
5999 6413 4.142038 CCCCCTCCGTTCCTAAATATTTG 58.858 47.826 11.05 1.40 0.00 2.32
6000 6414 3.789840 ACCCCCTCCGTTCCTAAATATTT 59.210 43.478 5.89 5.89 0.00 1.40
6001 6415 3.400419 ACCCCCTCCGTTCCTAAATATT 58.600 45.455 0.00 0.00 0.00 1.28
6002 6416 3.070525 ACCCCCTCCGTTCCTAAATAT 57.929 47.619 0.00 0.00 0.00 1.28
6003 6417 2.574074 ACCCCCTCCGTTCCTAAATA 57.426 50.000 0.00 0.00 0.00 1.40
6004 6418 2.293385 ACTACCCCCTCCGTTCCTAAAT 60.293 50.000 0.00 0.00 0.00 1.40
6005 6419 1.079323 ACTACCCCCTCCGTTCCTAAA 59.921 52.381 0.00 0.00 0.00 1.85
6006 6420 0.712380 ACTACCCCCTCCGTTCCTAA 59.288 55.000 0.00 0.00 0.00 2.69
6007 6421 1.607225 TACTACCCCCTCCGTTCCTA 58.393 55.000 0.00 0.00 0.00 2.94
6008 6422 0.939698 ATACTACCCCCTCCGTTCCT 59.060 55.000 0.00 0.00 0.00 3.36
6009 6423 2.158400 ACTATACTACCCCCTCCGTTCC 60.158 54.545 0.00 0.00 0.00 3.62
6010 6424 3.235750 ACTATACTACCCCCTCCGTTC 57.764 52.381 0.00 0.00 0.00 3.95
6011 6425 4.814224 TTACTATACTACCCCCTCCGTT 57.186 45.455 0.00 0.00 0.00 4.44
6012 6426 4.416848 TCTTTACTATACTACCCCCTCCGT 59.583 45.833 0.00 0.00 0.00 4.69
6013 6427 4.990526 TCTTTACTATACTACCCCCTCCG 58.009 47.826 0.00 0.00 0.00 4.63
6014 6428 6.493115 GTCTTCTTTACTATACTACCCCCTCC 59.507 46.154 0.00 0.00 0.00 4.30
6015 6429 7.065504 TGTCTTCTTTACTATACTACCCCCTC 58.934 42.308 0.00 0.00 0.00 4.30
6016 6430 6.989894 TGTCTTCTTTACTATACTACCCCCT 58.010 40.000 0.00 0.00 0.00 4.79
6017 6431 7.289549 ACATGTCTTCTTTACTATACTACCCCC 59.710 40.741 0.00 0.00 0.00 5.40
6018 6432 8.247666 ACATGTCTTCTTTACTATACTACCCC 57.752 38.462 0.00 0.00 0.00 4.95
6062 6476 0.679505 TCCTGGAGAACACAAGTCCG 59.320 55.000 0.00 0.00 32.51 4.79
6074 6498 0.907486 TCTGCCTCAACATCCTGGAG 59.093 55.000 1.52 0.00 0.00 3.86
6137 6561 0.322546 GCCCTTCGAATTGGAGTGGT 60.323 55.000 15.90 0.00 0.00 4.16
6250 6674 8.074972 GGCTAAGCTCTTATTGATTCATGAAAG 58.925 37.037 13.09 4.21 0.00 2.62
6269 6693 2.508663 GACGGTCACGGGCTAAGC 60.509 66.667 2.62 0.00 46.48 3.09
6276 6700 2.430921 GTGCTCTGACGGTCACGG 60.431 66.667 6.76 4.13 46.48 4.94
6284 6708 2.433318 GAGGTGCCGTGCTCTGAC 60.433 66.667 0.00 0.00 0.00 3.51
6288 6712 1.078848 AATGAGAGGTGCCGTGCTC 60.079 57.895 0.00 0.00 0.00 4.26
6326 6751 5.049198 ACGATGTACAAGAGTTAGACGTCAA 60.049 40.000 19.50 7.32 0.00 3.18
6330 6755 3.542704 GCACGATGTACAAGAGTTAGACG 59.457 47.826 0.00 0.00 0.00 4.18
6346 6771 0.251354 ATGCTCTTCACCTGCACGAT 59.749 50.000 0.00 0.00 39.63 3.73
6492 6917 3.926616 AGATTCGTAACCCACTGAAGTG 58.073 45.455 3.35 3.35 45.23 3.16
6493 6918 4.771054 AGTAGATTCGTAACCCACTGAAGT 59.229 41.667 0.00 0.00 0.00 3.01
6494 6919 5.326200 AGTAGATTCGTAACCCACTGAAG 57.674 43.478 0.00 0.00 0.00 3.02
6497 6922 4.595116 CGTAGTAGATTCGTAACCCACTG 58.405 47.826 0.00 0.00 0.00 3.66
6525 6950 5.046087 TCAGATGGAGCAAAAGAGAATCAGA 60.046 40.000 0.00 0.00 37.82 3.27
6551 6976 1.967779 TCACTGTCTCGAATCCCAACA 59.032 47.619 0.00 0.00 0.00 3.33
6588 7013 8.793592 TCTCCAAAAAGCTAGGAAAAGAATAAC 58.206 33.333 0.00 0.00 0.00 1.89
6609 7034 9.034800 AGCCAAAAATGATAATAAAACTCTCCA 57.965 29.630 0.00 0.00 0.00 3.86
6656 7081 1.427020 GCTGAATCTCGCCAACAGC 59.573 57.895 0.00 0.00 44.88 4.40
6747 7173 5.757808 GGTTCTCCTATGAATCAAAGAGAGC 59.242 44.000 12.52 12.52 32.38 4.09
6790 7216 1.991965 CGCCATTTGTTTTTCCCATCG 59.008 47.619 0.00 0.00 0.00 3.84
6853 7316 4.224274 TCCCAACGACGCAACGGT 62.224 61.111 0.00 0.00 37.61 4.83
6854 7317 3.708734 GTCCCAACGACGCAACGG 61.709 66.667 0.00 0.00 37.61 4.44
6901 7380 7.394641 GTGAAATTTCTGAAGGGTCTCCTAAAT 59.605 37.037 18.64 0.00 44.07 1.40
6902 7381 6.715264 GTGAAATTTCTGAAGGGTCTCCTAAA 59.285 38.462 18.64 0.00 44.07 1.85
6967 7518 0.035317 AGTGCAGCAAGTGATCGGAA 59.965 50.000 0.00 0.00 0.00 4.30
6985 7536 7.588512 GCAATAGAGCCATCCATAAACTAAAG 58.411 38.462 0.00 0.00 0.00 1.85
7012 7563 4.487019 TGCATACGATTCTTGTACGACAA 58.513 39.130 0.00 0.00 36.54 3.18
7013 7564 4.099380 TGCATACGATTCTTGTACGACA 57.901 40.909 0.00 0.00 0.00 4.35
7014 7565 4.085055 CCATGCATACGATTCTTGTACGAC 60.085 45.833 0.00 0.00 0.00 4.34
7015 7566 4.048504 CCATGCATACGATTCTTGTACGA 58.951 43.478 0.00 0.00 0.00 3.43
7016 7567 3.802139 ACCATGCATACGATTCTTGTACG 59.198 43.478 0.00 0.00 0.00 3.67
7017 7568 4.570772 ACACCATGCATACGATTCTTGTAC 59.429 41.667 0.00 0.00 0.00 2.90
7018 7569 4.765273 ACACCATGCATACGATTCTTGTA 58.235 39.130 0.00 0.00 0.00 2.41
7019 7570 3.609853 ACACCATGCATACGATTCTTGT 58.390 40.909 0.00 0.00 0.00 3.16
7020 7571 4.142622 ACAACACCATGCATACGATTCTTG 60.143 41.667 0.00 0.00 0.00 3.02
7021 7572 4.009675 ACAACACCATGCATACGATTCTT 58.990 39.130 0.00 0.00 0.00 2.52
7022 7573 3.609853 ACAACACCATGCATACGATTCT 58.390 40.909 0.00 0.00 0.00 2.40
7023 7574 5.443261 CATACAACACCATGCATACGATTC 58.557 41.667 0.00 0.00 0.00 2.52
7024 7575 4.261155 GCATACAACACCATGCATACGATT 60.261 41.667 0.00 0.00 45.51 3.34
7025 7576 3.250762 GCATACAACACCATGCATACGAT 59.749 43.478 0.00 0.00 45.51 3.73
7026 7577 2.611751 GCATACAACACCATGCATACGA 59.388 45.455 0.00 0.00 45.51 3.43
7027 7578 2.985751 GCATACAACACCATGCATACG 58.014 47.619 0.00 0.00 45.51 3.06
7032 7583 2.358582 TGCTATGCATACAACACCATGC 59.641 45.455 1.16 2.13 46.21 4.06
7033 7584 4.142425 TGTTGCTATGCATACAACACCATG 60.142 41.667 30.13 12.47 46.33 3.66
7034 7585 4.015764 TGTTGCTATGCATACAACACCAT 58.984 39.130 30.13 3.34 46.33 3.55
7035 7586 3.416156 TGTTGCTATGCATACAACACCA 58.584 40.909 30.13 18.94 46.33 4.17
7039 7590 3.429085 GCAGTGTTGCTATGCATACAAC 58.571 45.455 27.43 27.43 46.95 3.32
7040 7591 3.763097 GCAGTGTTGCTATGCATACAA 57.237 42.857 1.16 9.57 46.95 2.41
7052 7603 3.443976 ACGCCTTTAAAAAGCAGTGTTG 58.556 40.909 9.76 0.00 34.69 3.33
7053 7604 3.380320 AGACGCCTTTAAAAAGCAGTGTT 59.620 39.130 9.76 0.00 34.69 3.32
7054 7605 2.949644 AGACGCCTTTAAAAAGCAGTGT 59.050 40.909 9.76 2.91 34.69 3.55
7055 7606 3.003275 TCAGACGCCTTTAAAAAGCAGTG 59.997 43.478 9.76 0.00 34.69 3.66
7056 7607 3.211045 TCAGACGCCTTTAAAAAGCAGT 58.789 40.909 9.76 8.21 34.69 4.40
7057 7608 3.814945 CTCAGACGCCTTTAAAAAGCAG 58.185 45.455 9.76 5.78 34.69 4.24
7058 7609 2.031157 GCTCAGACGCCTTTAAAAAGCA 60.031 45.455 9.76 0.00 34.69 3.91
7059 7610 2.226674 AGCTCAGACGCCTTTAAAAAGC 59.773 45.455 0.00 0.73 34.69 3.51
7060 7611 4.489679 AAGCTCAGACGCCTTTAAAAAG 57.510 40.909 0.00 0.00 35.79 2.27
7061 7612 4.911514 AAAGCTCAGACGCCTTTAAAAA 57.088 36.364 0.00 0.00 0.00 1.94
7062 7613 4.911514 AAAAGCTCAGACGCCTTTAAAA 57.088 36.364 0.00 0.00 0.00 1.52
7063 7614 4.911514 AAAAAGCTCAGACGCCTTTAAA 57.088 36.364 0.00 0.00 0.00 1.52
7064 7615 6.380095 TTTAAAAAGCTCAGACGCCTTTAA 57.620 33.333 0.00 0.00 31.40 1.52
7065 7616 5.997385 CTTTAAAAAGCTCAGACGCCTTTA 58.003 37.500 0.00 0.00 0.00 1.85
7066 7617 4.860072 CTTTAAAAAGCTCAGACGCCTTT 58.140 39.130 0.00 0.00 0.00 3.11
7067 7618 4.489679 CTTTAAAAAGCTCAGACGCCTT 57.510 40.909 0.00 0.00 0.00 4.35
7079 7630 4.917415 CCTTGATGTCGTGGCTTTAAAAAG 59.083 41.667 0.00 0.00 39.03 2.27
7080 7631 4.794655 GCCTTGATGTCGTGGCTTTAAAAA 60.795 41.667 8.27 0.00 41.92 1.94
7081 7632 3.305064 GCCTTGATGTCGTGGCTTTAAAA 60.305 43.478 8.27 0.00 41.92 1.52
7082 7633 2.227865 GCCTTGATGTCGTGGCTTTAAA 59.772 45.455 8.27 0.00 41.92 1.52
7083 7634 1.810151 GCCTTGATGTCGTGGCTTTAA 59.190 47.619 8.27 0.00 41.92 1.52
7084 7635 1.448985 GCCTTGATGTCGTGGCTTTA 58.551 50.000 8.27 0.00 41.92 1.85
7085 7636 1.244019 GGCCTTGATGTCGTGGCTTT 61.244 55.000 13.20 0.00 44.36 3.51
7086 7637 1.675641 GGCCTTGATGTCGTGGCTT 60.676 57.895 13.20 0.00 44.36 4.35
7087 7638 2.045926 GGCCTTGATGTCGTGGCT 60.046 61.111 13.20 0.00 44.36 4.75
7088 7639 2.359850 TGGCCTTGATGTCGTGGC 60.360 61.111 3.32 7.32 44.22 5.01
7089 7640 1.003355 AGTGGCCTTGATGTCGTGG 60.003 57.895 3.32 0.00 0.00 4.94
7090 7641 1.021390 GGAGTGGCCTTGATGTCGTG 61.021 60.000 3.32 0.00 0.00 4.35
7091 7642 1.296715 GGAGTGGCCTTGATGTCGT 59.703 57.895 3.32 0.00 0.00 4.34
7092 7643 4.208632 GGAGTGGCCTTGATGTCG 57.791 61.111 3.32 0.00 0.00 4.35
7167 7718 4.229304 TGGAACTTGGAAGAACAGACAA 57.771 40.909 0.00 0.00 0.00 3.18
7299 7854 4.357947 GTGGAGGACGTCGCTGCA 62.358 66.667 19.14 19.14 0.00 4.41
7407 7962 1.546029 CATCCCAGTCGTGAAGAGTCA 59.454 52.381 0.00 0.00 0.00 3.41
7449 8023 0.460109 TCATTCATCCGTCGTGCAGG 60.460 55.000 0.00 0.00 0.00 4.85
7455 8029 1.536922 CCACCTCTCATTCATCCGTCG 60.537 57.143 0.00 0.00 0.00 5.12
7463 8037 1.153349 GCCGTCCCACCTCTCATTC 60.153 63.158 0.00 0.00 0.00 2.67
7464 8038 2.990479 GCCGTCCCACCTCTCATT 59.010 61.111 0.00 0.00 0.00 2.57
7466 8040 3.957435 ATCGCCGTCCCACCTCTCA 62.957 63.158 0.00 0.00 0.00 3.27
7480 8054 1.429423 GCCACTTTGCCTACATCGC 59.571 57.895 0.00 0.00 0.00 4.58
7484 8058 3.047280 CGCGCCACTTTGCCTACA 61.047 61.111 0.00 0.00 0.00 2.74
7520 8094 0.462759 CAAGGCCTTGTCGGATCTCC 60.463 60.000 33.46 0.00 35.92 3.71
7521 8095 1.092345 GCAAGGCCTTGTCGGATCTC 61.092 60.000 38.87 20.67 42.31 2.75
7522 8096 1.078143 GCAAGGCCTTGTCGGATCT 60.078 57.895 38.87 4.50 42.31 2.75
7523 8097 2.115291 GGCAAGGCCTTGTCGGATC 61.115 63.158 38.87 24.33 46.69 3.36
7524 8098 2.044946 GGCAAGGCCTTGTCGGAT 60.045 61.111 38.87 6.16 46.69 4.18
7542 8116 0.324645 TTGTACTACCCCGGTCTCCC 60.325 60.000 0.00 0.00 0.00 4.30
7543 8117 0.820226 GTTGTACTACCCCGGTCTCC 59.180 60.000 0.00 0.00 0.00 3.71
7544 8118 0.453390 CGTTGTACTACCCCGGTCTC 59.547 60.000 0.00 0.00 0.00 3.36
7545 8119 0.038166 TCGTTGTACTACCCCGGTCT 59.962 55.000 0.00 0.00 0.00 3.85
7546 8120 0.171231 GTCGTTGTACTACCCCGGTC 59.829 60.000 0.00 0.00 0.00 4.79
7547 8121 1.586154 CGTCGTTGTACTACCCCGGT 61.586 60.000 0.00 0.00 0.00 5.28
7548 8122 1.137404 CGTCGTTGTACTACCCCGG 59.863 63.158 0.00 0.00 0.00 5.73
7549 8123 1.137404 CCGTCGTTGTACTACCCCG 59.863 63.158 1.76 4.51 0.00 5.73
7550 8124 1.512694 CCCGTCGTTGTACTACCCC 59.487 63.158 1.76 0.00 0.00 4.95
7553 8127 1.514873 CGGCCCGTCGTTGTACTAC 60.515 63.158 0.00 0.00 0.00 2.73
7555 8129 4.060038 CCGGCCCGTCGTTGTACT 62.060 66.667 0.85 0.00 0.00 2.73
7572 8146 1.751927 CATGCACTTCCTCCCTGGC 60.752 63.158 0.00 0.00 35.26 4.85
7574 8148 1.001764 TGCATGCACTTCCTCCCTG 60.002 57.895 18.46 0.00 0.00 4.45
7591 8165 1.338200 CGACCCTTCCCTCTTGTTCTG 60.338 57.143 0.00 0.00 0.00 3.02
7618 8192 0.250166 AAAACCCCACTCGGAACTCG 60.250 55.000 0.00 0.00 40.90 4.18
7619 8193 2.614734 CCTAAAACCCCACTCGGAACTC 60.615 54.545 0.00 0.00 0.00 3.01
7620 8194 1.350019 CCTAAAACCCCACTCGGAACT 59.650 52.381 0.00 0.00 0.00 3.01
7621 8195 1.072806 ACCTAAAACCCCACTCGGAAC 59.927 52.381 0.00 0.00 0.00 3.62
7622 8196 1.072648 CACCTAAAACCCCACTCGGAA 59.927 52.381 0.00 0.00 0.00 4.30
7623 8197 0.688487 CACCTAAAACCCCACTCGGA 59.312 55.000 0.00 0.00 0.00 4.55
7624 8198 0.322187 CCACCTAAAACCCCACTCGG 60.322 60.000 0.00 0.00 0.00 4.63
7647 8221 3.964688 TCTTGTAGGACTTCAACACCTCA 59.035 43.478 0.00 0.00 35.52 3.86
7656 8230 5.986501 TCTTCCTCTTCTTGTAGGACTTC 57.013 43.478 0.00 0.00 41.63 3.01
7665 8239 2.977914 TCGCCATTCTTCCTCTTCTTG 58.022 47.619 0.00 0.00 0.00 3.02
7682 8262 3.487544 GGTTTTGTTGGAGCATCTATCGC 60.488 47.826 0.00 0.00 33.73 4.58
7707 8290 3.360740 TCTAATGCCATTCCCCTCCTA 57.639 47.619 0.00 0.00 0.00 2.94
7712 8295 2.154462 CGTGATCTAATGCCATTCCCC 58.846 52.381 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.