Multiple sequence alignment - TraesCS6D01G254800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G254800 chr6D 100.000 4978 0 0 1 4978 359533171 359528194 0.000000e+00 9193.0
1 TraesCS6D01G254800 chr6A 96.211 4196 121 21 295 4464 501225840 501221657 0.000000e+00 6833.0
2 TraesCS6D01G254800 chr6A 87.275 723 58 18 4261 4978 501221659 501220966 0.000000e+00 795.0
3 TraesCS6D01G254800 chr6A 97.727 44 1 0 4105 4148 501221638 501221595 5.340000e-10 76.8
4 TraesCS6D01G254800 chr6A 95.455 44 2 0 4105 4148 501221832 501221789 2.490000e-08 71.3
5 TraesCS6D01G254800 chr6B 97.497 2877 64 5 270 3143 541161008 541158137 0.000000e+00 4907.0
6 TraesCS6D01G254800 chr6B 92.553 1759 83 20 3145 4882 541158090 541156359 0.000000e+00 2479.0
7 TraesCS6D01G254800 chr6B 95.082 122 6 0 68 189 541161129 541161008 5.090000e-45 193.0
8 TraesCS6D01G254800 chr4D 94.624 93 5 0 186 278 11557435 11557343 1.440000e-30 145.0
9 TraesCS6D01G254800 chr4A 94.505 91 5 0 186 276 737382248 737382338 1.870000e-29 141.0
10 TraesCS6D01G254800 chr4A 94.253 87 5 0 187 273 582528738 582528824 3.130000e-27 134.0
11 TraesCS6D01G254800 chr4A 90.625 96 8 1 181 275 37781654 37781749 5.230000e-25 126.0
12 TraesCS6D01G254800 chr1B 95.402 87 4 0 188 274 352526614 352526700 6.720000e-29 139.0
13 TraesCS6D01G254800 chr2D 94.382 89 5 0 187 275 28843710 28843798 2.420000e-28 137.0
14 TraesCS6D01G254800 chr2B 94.318 88 5 0 186 273 719092710 719092623 8.690000e-28 135.0
15 TraesCS6D01G254800 chr7B 94.253 87 5 0 188 274 201496476 201496562 3.130000e-27 134.0
16 TraesCS6D01G254800 chr5B 94.253 87 5 0 188 274 127201146 127201060 3.130000e-27 134.0
17 TraesCS6D01G254800 chr5B 88.889 63 5 2 628 689 143294200 143294261 5.340000e-10 76.8
18 TraesCS6D01G254800 chr5D 76.744 172 21 14 531 687 131504922 131505089 1.490000e-10 78.7
19 TraesCS6D01G254800 chr5A 88.889 63 5 2 628 689 151735830 151735769 5.340000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G254800 chr6D 359528194 359533171 4977 True 9193.000000 9193 100.000000 1 4978 1 chr6D.!!$R1 4977
1 TraesCS6D01G254800 chr6A 501220966 501225840 4874 True 2568.266667 6833 93.737667 295 4978 3 chr6A.!!$R2 4683
2 TraesCS6D01G254800 chr6B 541156359 541161129 4770 True 2526.333333 4907 95.044000 68 4882 3 chr6B.!!$R1 4814

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
42 43 0.032952 TGCCGCGAGAGTAGTTGTTT 59.967 50.000 8.23 0.0 0.00 2.83 F
57 58 0.248702 TGTTTTCTTTCCCGCGTTGC 60.249 50.000 4.92 0.0 0.00 4.17 F
1215 1219 0.472734 AGAGCTCAAGTGAGGGTGGT 60.473 55.000 17.77 0.0 42.29 4.16 F
1893 1897 0.322322 CTGGTTGCATGCAATTGGGT 59.678 50.000 33.94 0.0 38.28 4.51 F
2664 2668 1.204941 GTCTTGCACTACATCTCCGGT 59.795 52.381 0.00 0.0 0.00 5.28 F
3514 3566 1.069978 TGCATCTTTCTGTCCGTGTGA 59.930 47.619 0.00 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1505 1509 0.108898 CTTGCTGACCTCACTCTCGG 60.109 60.000 0.00 0.0 0.00 4.63 R
1809 1813 1.022735 TCTCGAGGGATCGTTGTAGC 58.977 55.000 13.56 0.0 0.00 3.58 R
3143 3149 1.064463 TGAGAGCACCCAAATGGATCC 60.064 52.381 4.20 4.2 37.39 3.36 R
3365 3416 1.067060 GGCCCAACTTTATCGCAATCC 59.933 52.381 0.00 0.0 0.00 3.01 R
3890 3942 1.136329 TTGCCTTCCTGCTTCTCCCT 61.136 55.000 0.00 0.0 0.00 4.20 R
4842 5109 0.111639 AATACGTGTTTGCCCCCAGT 59.888 50.000 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.363979 TGCGAAATACTTGTGTAATGCAA 57.636 34.783 0.00 0.00 31.80 4.08
23 24 5.948588 TGCGAAATACTTGTGTAATGCAAT 58.051 33.333 0.00 0.00 31.80 3.56
24 25 5.799435 TGCGAAATACTTGTGTAATGCAATG 59.201 36.000 0.00 0.00 31.80 2.82
25 26 5.275881 GCGAAATACTTGTGTAATGCAATGC 60.276 40.000 0.00 0.00 31.80 3.56
26 27 5.229887 CGAAATACTTGTGTAATGCAATGCC 59.770 40.000 1.53 0.00 31.80 4.40
27 28 2.634982 ACTTGTGTAATGCAATGCCG 57.365 45.000 1.53 0.00 0.00 5.69
28 29 1.270971 CTTGTGTAATGCAATGCCGC 58.729 50.000 1.53 0.00 0.00 6.53
29 30 0.455802 TTGTGTAATGCAATGCCGCG 60.456 50.000 1.53 0.00 33.35 6.46
30 31 1.301677 TGTGTAATGCAATGCCGCGA 61.302 50.000 8.23 0.00 33.35 5.87
31 32 0.589729 GTGTAATGCAATGCCGCGAG 60.590 55.000 8.23 0.00 33.35 5.03
32 33 0.742635 TGTAATGCAATGCCGCGAGA 60.743 50.000 8.23 0.00 33.35 4.04
33 34 0.041839 GTAATGCAATGCCGCGAGAG 60.042 55.000 8.23 0.00 33.35 3.20
34 35 0.461870 TAATGCAATGCCGCGAGAGT 60.462 50.000 8.23 0.00 33.35 3.24
35 36 0.461870 AATGCAATGCCGCGAGAGTA 60.462 50.000 8.23 0.00 33.35 2.59
36 37 0.877649 ATGCAATGCCGCGAGAGTAG 60.878 55.000 8.23 0.00 33.35 2.57
37 38 1.519455 GCAATGCCGCGAGAGTAGT 60.519 57.895 8.23 0.00 0.00 2.73
38 39 1.084370 GCAATGCCGCGAGAGTAGTT 61.084 55.000 8.23 0.00 0.00 2.24
39 40 0.647410 CAATGCCGCGAGAGTAGTTG 59.353 55.000 8.23 0.00 0.00 3.16
40 41 0.246635 AATGCCGCGAGAGTAGTTGT 59.753 50.000 8.23 0.00 0.00 3.32
41 42 0.246635 ATGCCGCGAGAGTAGTTGTT 59.753 50.000 8.23 0.00 0.00 2.83
42 43 0.032952 TGCCGCGAGAGTAGTTGTTT 59.967 50.000 8.23 0.00 0.00 2.83
43 44 1.145803 GCCGCGAGAGTAGTTGTTTT 58.854 50.000 8.23 0.00 0.00 2.43
44 45 1.126296 GCCGCGAGAGTAGTTGTTTTC 59.874 52.381 8.23 0.00 0.00 2.29
45 46 2.673833 CCGCGAGAGTAGTTGTTTTCT 58.326 47.619 8.23 0.00 0.00 2.52
46 47 3.057734 CCGCGAGAGTAGTTGTTTTCTT 58.942 45.455 8.23 0.00 0.00 2.52
47 48 3.493503 CCGCGAGAGTAGTTGTTTTCTTT 59.506 43.478 8.23 0.00 0.00 2.52
48 49 4.376109 CCGCGAGAGTAGTTGTTTTCTTTC 60.376 45.833 8.23 0.00 0.00 2.62
49 50 4.376109 CGCGAGAGTAGTTGTTTTCTTTCC 60.376 45.833 0.00 0.00 0.00 3.13
50 51 4.083961 GCGAGAGTAGTTGTTTTCTTTCCC 60.084 45.833 0.00 0.00 0.00 3.97
51 52 4.150098 CGAGAGTAGTTGTTTTCTTTCCCG 59.850 45.833 0.00 0.00 0.00 5.14
52 53 3.813724 AGAGTAGTTGTTTTCTTTCCCGC 59.186 43.478 0.00 0.00 0.00 6.13
53 54 2.546789 AGTAGTTGTTTTCTTTCCCGCG 59.453 45.455 0.00 0.00 0.00 6.46
54 55 1.385528 AGTTGTTTTCTTTCCCGCGT 58.614 45.000 4.92 0.00 0.00 6.01
55 56 1.746787 AGTTGTTTTCTTTCCCGCGTT 59.253 42.857 4.92 0.00 0.00 4.84
56 57 1.849829 GTTGTTTTCTTTCCCGCGTTG 59.150 47.619 4.92 0.00 0.00 4.10
57 58 0.248702 TGTTTTCTTTCCCGCGTTGC 60.249 50.000 4.92 0.00 0.00 4.17
85 86 6.691508 CATTAGTCGAATGGTATGGAGATCA 58.308 40.000 0.00 0.00 41.23 2.92
103 104 2.642427 TCATGTCGTAATGCATGGCTT 58.358 42.857 0.00 0.00 41.83 4.35
106 107 1.737236 TGTCGTAATGCATGGCTTCAC 59.263 47.619 0.00 0.00 0.00 3.18
188 189 7.581213 TTTCTTCTTCCAGATTTTGCAACTA 57.419 32.000 0.00 0.00 0.00 2.24
189 190 6.560253 TCTTCTTCCAGATTTTGCAACTAC 57.440 37.500 0.00 0.00 0.00 2.73
190 191 6.299141 TCTTCTTCCAGATTTTGCAACTACT 58.701 36.000 0.00 0.00 0.00 2.57
191 192 6.428159 TCTTCTTCCAGATTTTGCAACTACTC 59.572 38.462 0.00 0.00 0.00 2.59
192 193 5.003804 TCTTCCAGATTTTGCAACTACTCC 58.996 41.667 0.00 0.00 0.00 3.85
193 194 3.686016 TCCAGATTTTGCAACTACTCCC 58.314 45.455 0.00 0.00 0.00 4.30
194 195 3.330701 TCCAGATTTTGCAACTACTCCCT 59.669 43.478 0.00 0.00 0.00 4.20
195 196 3.691609 CCAGATTTTGCAACTACTCCCTC 59.308 47.826 0.00 0.00 0.00 4.30
196 197 3.691609 CAGATTTTGCAACTACTCCCTCC 59.308 47.826 0.00 0.00 0.00 4.30
197 198 2.178912 TTTTGCAACTACTCCCTCCG 57.821 50.000 0.00 0.00 0.00 4.63
198 199 1.053424 TTTGCAACTACTCCCTCCGT 58.947 50.000 0.00 0.00 0.00 4.69
199 200 1.053424 TTGCAACTACTCCCTCCGTT 58.947 50.000 0.00 0.00 0.00 4.44
200 201 1.053424 TGCAACTACTCCCTCCGTTT 58.947 50.000 0.00 0.00 0.00 3.60
201 202 1.001633 TGCAACTACTCCCTCCGTTTC 59.998 52.381 0.00 0.00 0.00 2.78
202 203 1.001633 GCAACTACTCCCTCCGTTTCA 59.998 52.381 0.00 0.00 0.00 2.69
203 204 2.549349 GCAACTACTCCCTCCGTTTCAA 60.549 50.000 0.00 0.00 0.00 2.69
204 205 3.735591 CAACTACTCCCTCCGTTTCAAA 58.264 45.455 0.00 0.00 0.00 2.69
205 206 4.131596 CAACTACTCCCTCCGTTTCAAAA 58.868 43.478 0.00 0.00 0.00 2.44
206 207 4.635699 ACTACTCCCTCCGTTTCAAAAT 57.364 40.909 0.00 0.00 0.00 1.82
207 208 5.750352 ACTACTCCCTCCGTTTCAAAATA 57.250 39.130 0.00 0.00 0.00 1.40
208 209 5.731591 ACTACTCCCTCCGTTTCAAAATAG 58.268 41.667 0.00 0.00 0.00 1.73
209 210 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
210 211 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
211 212 6.555463 ACTCCCTCCGTTTCAAAATAGATA 57.445 37.500 0.00 0.00 0.00 1.98
212 213 6.954232 ACTCCCTCCGTTTCAAAATAGATAA 58.046 36.000 0.00 0.00 0.00 1.75
213 214 6.822170 ACTCCCTCCGTTTCAAAATAGATAAC 59.178 38.462 0.00 0.00 0.00 1.89
214 215 6.954232 TCCCTCCGTTTCAAAATAGATAACT 58.046 36.000 0.00 0.00 0.00 2.24
215 216 7.046033 TCCCTCCGTTTCAAAATAGATAACTC 58.954 38.462 0.00 0.00 0.00 3.01
216 217 6.821665 CCCTCCGTTTCAAAATAGATAACTCA 59.178 38.462 0.00 0.00 0.00 3.41
217 218 7.335924 CCCTCCGTTTCAAAATAGATAACTCAA 59.664 37.037 0.00 0.00 0.00 3.02
218 219 8.175716 CCTCCGTTTCAAAATAGATAACTCAAC 58.824 37.037 0.00 0.00 0.00 3.18
219 220 8.842358 TCCGTTTCAAAATAGATAACTCAACT 57.158 30.769 0.00 0.00 0.00 3.16
220 221 9.280174 TCCGTTTCAAAATAGATAACTCAACTT 57.720 29.630 0.00 0.00 0.00 2.66
221 222 9.893305 CCGTTTCAAAATAGATAACTCAACTTT 57.107 29.630 0.00 0.00 0.00 2.66
247 248 9.563748 TGTACTAACTTTAATACAAAGTTGGCT 57.436 29.630 20.03 12.45 46.18 4.75
249 250 8.685838 ACTAACTTTAATACAAAGTTGGCTCA 57.314 30.769 20.03 4.38 46.18 4.26
250 251 9.297037 ACTAACTTTAATACAAAGTTGGCTCAT 57.703 29.630 20.03 4.10 46.18 2.90
251 252 9.774742 CTAACTTTAATACAAAGTTGGCTCATC 57.225 33.333 20.03 0.00 46.41 2.92
252 253 8.409358 AACTTTAATACAAAGTTGGCTCATCT 57.591 30.769 12.88 0.00 45.58 2.90
253 254 9.515226 AACTTTAATACAAAGTTGGCTCATCTA 57.485 29.630 12.88 0.00 45.58 1.98
254 255 9.686683 ACTTTAATACAAAGTTGGCTCATCTAT 57.313 29.630 0.00 0.00 37.18 1.98
259 260 6.899393 ACAAAGTTGGCTCATCTATTTTGA 57.101 33.333 0.00 0.00 0.00 2.69
260 261 7.288810 ACAAAGTTGGCTCATCTATTTTGAA 57.711 32.000 0.00 0.00 0.00 2.69
261 262 7.725251 ACAAAGTTGGCTCATCTATTTTGAAA 58.275 30.769 0.00 0.00 0.00 2.69
262 263 7.653311 ACAAAGTTGGCTCATCTATTTTGAAAC 59.347 33.333 0.00 0.00 0.00 2.78
263 264 5.942872 AGTTGGCTCATCTATTTTGAAACG 58.057 37.500 0.00 0.00 0.00 3.60
264 265 4.963276 TGGCTCATCTATTTTGAAACGG 57.037 40.909 0.00 0.00 0.00 4.44
265 266 4.584874 TGGCTCATCTATTTTGAAACGGA 58.415 39.130 0.00 0.00 0.00 4.69
266 267 4.635765 TGGCTCATCTATTTTGAAACGGAG 59.364 41.667 0.00 0.00 0.00 4.63
267 268 4.496507 GGCTCATCTATTTTGAAACGGAGC 60.497 45.833 0.00 0.00 43.23 4.70
268 269 4.783450 GCTCATCTATTTTGAAACGGAGCG 60.783 45.833 0.00 0.00 36.33 5.03
301 302 8.142551 ACGGAAGTACAAGATCAACTATTATCC 58.857 37.037 0.00 0.00 46.88 2.59
302 303 8.361139 CGGAAGTACAAGATCAACTATTATCCT 58.639 37.037 0.00 0.00 0.00 3.24
389 390 2.115337 ATCCATCTCCTCTTCCCCAG 57.885 55.000 0.00 0.00 0.00 4.45
672 675 2.956964 CAGCGATCTCGGGCGTTC 60.957 66.667 1.34 0.00 40.23 3.95
850 854 6.410942 AGTCTCATAATTGATCCGTGATGA 57.589 37.500 0.00 0.00 0.00 2.92
906 910 9.995003 TTGCCTTAATTGATTGTATTCTGTTTT 57.005 25.926 0.00 0.00 0.00 2.43
1089 1093 2.112815 GGAGAATTTGACGGCCCCG 61.113 63.158 4.96 4.96 46.03 5.73
1215 1219 0.472734 AGAGCTCAAGTGAGGGTGGT 60.473 55.000 17.77 0.00 42.29 4.16
1527 1531 0.835543 AGAGTGAGGTCAGCAAGCCT 60.836 55.000 0.00 0.00 37.91 4.58
1797 1801 5.116180 TGCAATATGGGAAAGTACGAAGAG 58.884 41.667 0.00 0.00 0.00 2.85
1878 1882 1.683385 GCTCTTGCCAAGTTTTCTGGT 59.317 47.619 4.04 0.00 0.00 4.00
1893 1897 0.322322 CTGGTTGCATGCAATTGGGT 59.678 50.000 33.94 0.00 38.28 4.51
2661 2665 2.028112 TGGTGTCTTGCACTACATCTCC 60.028 50.000 11.16 5.85 46.86 3.71
2664 2668 1.204941 GTCTTGCACTACATCTCCGGT 59.795 52.381 0.00 0.00 0.00 5.28
2931 2935 1.481871 TGGGAAGGTAAGCTCCGTAG 58.518 55.000 0.00 0.00 31.97 3.51
2937 2941 4.382793 GGAAGGTAAGCTCCGTAGTGATTT 60.383 45.833 0.00 0.00 0.00 2.17
2962 2966 9.621629 TTCCTTGTCAAGTTGTTTCTTCTATAA 57.378 29.630 11.61 0.00 0.00 0.98
3076 3080 2.364324 TCTAAGCCCTGCATAACCTACG 59.636 50.000 0.00 0.00 0.00 3.51
3130 3136 2.546778 CGCACCTCGCCTTTCTTATTA 58.453 47.619 0.00 0.00 37.30 0.98
3143 3149 9.778993 CGCCTTTCTTATTATCCATGATTTATG 57.221 33.333 0.00 0.00 36.50 1.90
3179 3230 2.828520 CTCTCAAGTCTCAACTAGGCCA 59.171 50.000 5.01 0.00 33.48 5.36
3182 3233 3.764434 CTCAAGTCTCAACTAGGCCACTA 59.236 47.826 5.01 0.00 33.48 2.74
3252 3303 6.712547 AGGATATGAGTAAAGCCATAAAGTGC 59.287 38.462 0.00 0.00 0.00 4.40
3284 3335 1.597937 GCAACTGTCGAGCCTTTGTTG 60.598 52.381 0.00 0.00 38.13 3.33
3365 3416 2.589798 AATTGAATTGGGCAGATGCG 57.410 45.000 0.00 0.00 43.26 4.73
3514 3566 1.069978 TGCATCTTTCTGTCCGTGTGA 59.930 47.619 0.00 0.00 0.00 3.58
3515 3567 2.289631 TGCATCTTTCTGTCCGTGTGAT 60.290 45.455 0.00 0.00 0.00 3.06
3604 3656 7.939784 TGATGCTAGTTCTGAACTAAGAGTA 57.060 36.000 25.52 17.95 42.99 2.59
3717 3769 2.496899 TGAAAACTGCATCTCCCTCC 57.503 50.000 0.00 0.00 0.00 4.30
3737 3789 5.307976 CCTCCCAGAATATGTCCAGTTGATA 59.692 44.000 0.00 0.00 0.00 2.15
3818 3870 2.289274 TGTTGAAATGCGCGAAGAGAAA 59.711 40.909 12.10 0.00 0.00 2.52
3887 3939 1.130054 AGTTGCTGAAGGAGGCTGGA 61.130 55.000 0.00 0.00 0.00 3.86
3890 3942 2.650116 GCTGAAGGAGGCTGGACGA 61.650 63.158 0.00 0.00 0.00 4.20
3972 4024 2.038557 GGGAAGAGGACTACAGTTGCAA 59.961 50.000 0.00 0.00 0.00 4.08
4069 4121 4.733077 TCAAATTTGGTGAGAGGGGTAA 57.267 40.909 17.90 0.00 0.00 2.85
4080 4132 3.394606 TGAGAGGGGTAAATGGGAATAGC 59.605 47.826 0.00 0.00 0.00 2.97
4295 4354 8.298854 TGTTTAGATGACACAAAAATGATCTGG 58.701 33.333 0.00 0.00 0.00 3.86
4299 4358 5.199024 TGACACAAAAATGATCTGGTTGG 57.801 39.130 0.00 0.00 0.00 3.77
4322 4381 5.344884 GTTGTTGTAAAGTTGCAAAGGCTA 58.655 37.500 0.00 0.00 41.91 3.93
4326 4385 7.717568 TGTTGTAAAGTTGCAAAGGCTATTAA 58.282 30.769 0.00 0.00 41.91 1.40
4345 4404 6.926630 ATTAACACCAGGAATGCCTTTTAA 57.073 33.333 0.00 0.00 43.90 1.52
4356 4416 1.064134 CCTTTTAATGCTCGGCGCC 59.936 57.895 19.07 19.07 38.05 6.53
4454 4719 9.517868 TTCACATTGTCATATGGATGCATATTA 57.482 29.630 16.32 6.97 32.62 0.98
4484 4749 9.582223 GATTAAATACATTAACAAGCGAGCTAC 57.418 33.333 0.00 0.00 36.35 3.58
4526 4791 1.334160 TTTCACCCTGTGTAGCTCGA 58.666 50.000 0.00 0.00 34.79 4.04
4532 4797 1.670087 CCCTGTGTAGCTCGAGTGTTG 60.670 57.143 15.13 0.00 0.00 3.33
4651 4918 0.461870 AGCTCGAGCACACAAACACA 60.462 50.000 36.87 0.00 45.16 3.72
4655 4922 2.013400 TCGAGCACACAAACACAACAT 58.987 42.857 0.00 0.00 0.00 2.71
4701 4968 6.767902 CAGTGTCTATAGCATTAACCATGGTT 59.232 38.462 31.85 31.85 41.00 3.67
4792 5059 8.551205 TCTAGCACAATCGACATAATTTGAATC 58.449 33.333 1.41 0.00 0.00 2.52
4819 5086 0.855349 GTCATATGAAGCACGCTCCG 59.145 55.000 7.07 0.00 0.00 4.63
4830 5097 1.856014 GCACGCTCCGTAATGATTTGC 60.856 52.381 0.00 0.00 38.32 3.68
4836 5103 3.466836 CTCCGTAATGATTTGCAGGCTA 58.533 45.455 0.00 0.00 0.00 3.93
4839 5106 2.290641 CGTAATGATTTGCAGGCTACCC 59.709 50.000 0.00 0.00 0.00 3.69
4840 5107 2.530460 AATGATTTGCAGGCTACCCA 57.470 45.000 0.00 0.00 0.00 4.51
4842 5109 0.991146 TGATTTGCAGGCTACCCAGA 59.009 50.000 0.00 0.00 0.00 3.86
4857 5124 2.113139 AGACTGGGGGCAAACACG 59.887 61.111 0.00 0.00 0.00 4.49
4874 5141 2.159894 ACACGTATTCGACAAACGCATG 60.160 45.455 11.92 7.53 40.18 4.06
4875 5142 2.091432 CACGTATTCGACAAACGCATGA 59.909 45.455 11.92 0.00 40.18 3.07
4899 5166 0.976073 TACTCCCCAAGCTCCCTTCG 60.976 60.000 0.00 0.00 0.00 3.79
4914 5181 3.332393 TTCGCCTCCCTCCTCCCAT 62.332 63.158 0.00 0.00 0.00 4.00
4918 5185 1.768077 CCTCCCTCCTCCCATGTCC 60.768 68.421 0.00 0.00 0.00 4.02
4925 5192 2.687200 CTCCCATGTCCCCGACCA 60.687 66.667 0.00 0.00 0.00 4.02
4965 5233 0.179062 CTCAGGGGAGAAAGATGCCG 60.179 60.000 0.00 0.00 44.26 5.69
4967 5235 1.997874 AGGGGAGAAAGATGCCGCT 60.998 57.895 0.00 0.00 39.79 5.52
4970 5238 1.092345 GGGAGAAAGATGCCGCTGTC 61.092 60.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.275881 GCATTGCATTACACAAGTATTTCGC 60.276 40.000 3.15 0.00 0.00 4.70
2 3 5.229887 GGCATTGCATTACACAAGTATTTCG 59.770 40.000 11.39 0.00 0.00 3.46
3 4 5.229887 CGGCATTGCATTACACAAGTATTTC 59.770 40.000 11.39 0.00 0.00 2.17
4 5 5.101628 CGGCATTGCATTACACAAGTATTT 58.898 37.500 11.39 0.00 0.00 1.40
5 6 4.671377 CGGCATTGCATTACACAAGTATT 58.329 39.130 11.39 0.00 0.00 1.89
6 7 3.489059 GCGGCATTGCATTACACAAGTAT 60.489 43.478 11.39 0.00 34.15 2.12
8 9 1.402720 GCGGCATTGCATTACACAAGT 60.403 47.619 11.39 0.00 34.15 3.16
9 10 1.270971 GCGGCATTGCATTACACAAG 58.729 50.000 11.39 0.00 34.15 3.16
10 11 0.455802 CGCGGCATTGCATTACACAA 60.456 50.000 11.39 0.00 34.15 3.33
11 12 1.136356 CGCGGCATTGCATTACACA 59.864 52.632 11.39 0.00 34.15 3.72
12 13 0.589729 CTCGCGGCATTGCATTACAC 60.590 55.000 11.39 0.00 34.15 2.90
13 14 0.742635 TCTCGCGGCATTGCATTACA 60.743 50.000 11.39 0.00 34.15 2.41
14 15 0.041839 CTCTCGCGGCATTGCATTAC 60.042 55.000 11.39 0.00 34.15 1.89
15 16 0.461870 ACTCTCGCGGCATTGCATTA 60.462 50.000 11.39 0.00 34.15 1.90
16 17 0.461870 TACTCTCGCGGCATTGCATT 60.462 50.000 11.39 0.00 34.15 3.56
17 18 0.877649 CTACTCTCGCGGCATTGCAT 60.878 55.000 11.39 0.00 34.15 3.96
18 19 1.519234 CTACTCTCGCGGCATTGCA 60.519 57.895 11.39 0.00 34.15 4.08
19 20 1.084370 AACTACTCTCGCGGCATTGC 61.084 55.000 6.13 0.00 0.00 3.56
20 21 0.647410 CAACTACTCTCGCGGCATTG 59.353 55.000 6.13 0.00 0.00 2.82
21 22 0.246635 ACAACTACTCTCGCGGCATT 59.753 50.000 6.13 0.00 0.00 3.56
22 23 0.246635 AACAACTACTCTCGCGGCAT 59.753 50.000 6.13 0.00 0.00 4.40
23 24 0.032952 AAACAACTACTCTCGCGGCA 59.967 50.000 6.13 0.00 0.00 5.69
24 25 1.126296 GAAAACAACTACTCTCGCGGC 59.874 52.381 6.13 0.00 0.00 6.53
25 26 2.673833 AGAAAACAACTACTCTCGCGG 58.326 47.619 6.13 0.00 0.00 6.46
26 27 4.376109 GGAAAGAAAACAACTACTCTCGCG 60.376 45.833 0.00 0.00 0.00 5.87
27 28 4.083961 GGGAAAGAAAACAACTACTCTCGC 60.084 45.833 0.00 0.00 0.00 5.03
28 29 4.150098 CGGGAAAGAAAACAACTACTCTCG 59.850 45.833 0.00 0.00 0.00 4.04
29 30 4.083961 GCGGGAAAGAAAACAACTACTCTC 60.084 45.833 0.00 0.00 0.00 3.20
30 31 3.813724 GCGGGAAAGAAAACAACTACTCT 59.186 43.478 0.00 0.00 0.00 3.24
31 32 3.363673 CGCGGGAAAGAAAACAACTACTC 60.364 47.826 0.00 0.00 0.00 2.59
32 33 2.546789 CGCGGGAAAGAAAACAACTACT 59.453 45.455 0.00 0.00 0.00 2.57
33 34 2.288729 ACGCGGGAAAGAAAACAACTAC 59.711 45.455 12.47 0.00 0.00 2.73
34 35 2.563702 ACGCGGGAAAGAAAACAACTA 58.436 42.857 12.47 0.00 0.00 2.24
35 36 1.385528 ACGCGGGAAAGAAAACAACT 58.614 45.000 12.47 0.00 0.00 3.16
36 37 1.849829 CAACGCGGGAAAGAAAACAAC 59.150 47.619 12.47 0.00 0.00 3.32
37 38 1.799548 GCAACGCGGGAAAGAAAACAA 60.800 47.619 12.47 0.00 0.00 2.83
38 39 0.248702 GCAACGCGGGAAAGAAAACA 60.249 50.000 12.47 0.00 0.00 2.83
39 40 2.502163 GCAACGCGGGAAAGAAAAC 58.498 52.632 12.47 0.00 0.00 2.43
51 52 2.403586 GACTAATGCCCGCAACGC 59.596 61.111 0.00 0.00 0.00 4.84
52 53 1.355796 TTCGACTAATGCCCGCAACG 61.356 55.000 0.00 0.00 0.00 4.10
53 54 1.014352 ATTCGACTAATGCCCGCAAC 58.986 50.000 0.00 0.00 0.00 4.17
54 55 1.013596 CATTCGACTAATGCCCGCAA 58.986 50.000 0.00 0.00 38.69 4.85
55 56 0.813610 CCATTCGACTAATGCCCGCA 60.814 55.000 0.00 0.00 43.18 5.69
56 57 0.814010 ACCATTCGACTAATGCCCGC 60.814 55.000 0.00 0.00 43.18 6.13
57 58 2.519377 TACCATTCGACTAATGCCCG 57.481 50.000 0.00 0.00 43.18 6.13
58 59 3.074412 CCATACCATTCGACTAATGCCC 58.926 50.000 0.00 0.00 43.18 5.36
59 60 3.997021 CTCCATACCATTCGACTAATGCC 59.003 47.826 0.00 0.00 43.18 4.40
60 61 4.883083 TCTCCATACCATTCGACTAATGC 58.117 43.478 0.00 0.00 43.18 3.56
61 62 6.691508 TGATCTCCATACCATTCGACTAATG 58.308 40.000 0.00 0.00 43.99 1.90
62 63 6.918067 TGATCTCCATACCATTCGACTAAT 57.082 37.500 0.00 0.00 0.00 1.73
63 64 6.267699 ACATGATCTCCATACCATTCGACTAA 59.732 38.462 0.00 0.00 33.31 2.24
64 65 5.775195 ACATGATCTCCATACCATTCGACTA 59.225 40.000 0.00 0.00 33.31 2.59
65 66 4.590647 ACATGATCTCCATACCATTCGACT 59.409 41.667 0.00 0.00 33.31 4.18
66 67 4.887748 ACATGATCTCCATACCATTCGAC 58.112 43.478 0.00 0.00 33.31 4.20
85 86 2.355756 GTGAAGCCATGCATTACGACAT 59.644 45.455 0.00 0.00 0.00 3.06
188 189 4.903045 TCTATTTTGAAACGGAGGGAGT 57.097 40.909 0.00 0.00 0.00 3.85
189 190 7.048512 AGTTATCTATTTTGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
190 191 6.954232 AGTTATCTATTTTGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
191 192 6.821665 TGAGTTATCTATTTTGAAACGGAGGG 59.178 38.462 0.00 0.00 0.00 4.30
192 193 7.843490 TGAGTTATCTATTTTGAAACGGAGG 57.157 36.000 0.00 0.00 0.00 4.30
193 194 8.936864 AGTTGAGTTATCTATTTTGAAACGGAG 58.063 33.333 0.00 0.00 0.00 4.63
194 195 8.842358 AGTTGAGTTATCTATTTTGAAACGGA 57.158 30.769 0.00 0.00 0.00 4.69
195 196 9.893305 AAAGTTGAGTTATCTATTTTGAAACGG 57.107 29.630 0.00 0.00 0.00 4.44
221 222 9.563748 AGCCAACTTTGTATTAAAGTTAGTACA 57.436 29.630 15.03 3.15 45.57 2.90
223 224 9.781633 TGAGCCAACTTTGTATTAAAGTTAGTA 57.218 29.630 15.03 2.00 45.57 1.82
224 225 8.685838 TGAGCCAACTTTGTATTAAAGTTAGT 57.314 30.769 15.03 5.56 45.57 2.24
225 226 9.774742 GATGAGCCAACTTTGTATTAAAGTTAG 57.225 33.333 15.03 10.61 45.57 2.34
226 227 9.515226 AGATGAGCCAACTTTGTATTAAAGTTA 57.485 29.630 15.03 3.25 45.57 2.24
228 229 9.686683 ATAGATGAGCCAACTTTGTATTAAAGT 57.313 29.630 0.00 0.00 41.82 2.66
233 234 9.023962 TCAAAATAGATGAGCCAACTTTGTATT 57.976 29.630 0.00 0.00 0.00 1.89
234 235 8.579850 TCAAAATAGATGAGCCAACTTTGTAT 57.420 30.769 0.00 0.00 0.00 2.29
235 236 7.994425 TCAAAATAGATGAGCCAACTTTGTA 57.006 32.000 0.00 0.00 0.00 2.41
236 237 6.899393 TCAAAATAGATGAGCCAACTTTGT 57.101 33.333 0.00 0.00 0.00 2.83
237 238 7.148918 CGTTTCAAAATAGATGAGCCAACTTTG 60.149 37.037 0.00 0.00 0.00 2.77
238 239 6.863126 CGTTTCAAAATAGATGAGCCAACTTT 59.137 34.615 0.00 0.00 0.00 2.66
239 240 6.381801 CGTTTCAAAATAGATGAGCCAACTT 58.618 36.000 0.00 0.00 0.00 2.66
240 241 5.106157 CCGTTTCAAAATAGATGAGCCAACT 60.106 40.000 0.00 0.00 0.00 3.16
241 242 5.095490 CCGTTTCAAAATAGATGAGCCAAC 58.905 41.667 0.00 0.00 0.00 3.77
242 243 5.007034 TCCGTTTCAAAATAGATGAGCCAA 58.993 37.500 0.00 0.00 0.00 4.52
243 244 4.584874 TCCGTTTCAAAATAGATGAGCCA 58.415 39.130 0.00 0.00 0.00 4.75
244 245 4.496507 GCTCCGTTTCAAAATAGATGAGCC 60.497 45.833 0.00 0.00 37.36 4.70
245 246 4.592179 GCTCCGTTTCAAAATAGATGAGC 58.408 43.478 0.00 0.00 36.34 4.26
246 247 4.566759 TCGCTCCGTTTCAAAATAGATGAG 59.433 41.667 0.00 0.00 0.00 2.90
247 248 4.500127 TCGCTCCGTTTCAAAATAGATGA 58.500 39.130 0.00 0.00 0.00 2.92
248 249 4.330074 ACTCGCTCCGTTTCAAAATAGATG 59.670 41.667 0.00 0.00 0.00 2.90
249 250 4.504858 ACTCGCTCCGTTTCAAAATAGAT 58.495 39.130 0.00 0.00 0.00 1.98
250 251 3.921677 ACTCGCTCCGTTTCAAAATAGA 58.078 40.909 0.00 0.00 0.00 1.98
251 252 5.100259 TCTACTCGCTCCGTTTCAAAATAG 58.900 41.667 0.00 0.00 0.00 1.73
252 253 5.063180 TCTACTCGCTCCGTTTCAAAATA 57.937 39.130 0.00 0.00 0.00 1.40
253 254 3.921677 TCTACTCGCTCCGTTTCAAAAT 58.078 40.909 0.00 0.00 0.00 1.82
254 255 3.374220 TCTACTCGCTCCGTTTCAAAA 57.626 42.857 0.00 0.00 0.00 2.44
255 256 3.054878 GTTCTACTCGCTCCGTTTCAAA 58.945 45.455 0.00 0.00 0.00 2.69
256 257 2.669364 GTTCTACTCGCTCCGTTTCAA 58.331 47.619 0.00 0.00 0.00 2.69
257 258 1.400629 CGTTCTACTCGCTCCGTTTCA 60.401 52.381 0.00 0.00 0.00 2.69
258 259 1.257539 CGTTCTACTCGCTCCGTTTC 58.742 55.000 0.00 0.00 0.00 2.78
259 260 0.109412 CCGTTCTACTCGCTCCGTTT 60.109 55.000 0.00 0.00 0.00 3.60
260 261 0.957395 TCCGTTCTACTCGCTCCGTT 60.957 55.000 0.00 0.00 0.00 4.44
261 262 0.957395 TTCCGTTCTACTCGCTCCGT 60.957 55.000 0.00 0.00 0.00 4.69
262 263 0.248134 CTTCCGTTCTACTCGCTCCG 60.248 60.000 0.00 0.00 0.00 4.63
263 264 0.810016 ACTTCCGTTCTACTCGCTCC 59.190 55.000 0.00 0.00 0.00 4.70
264 265 2.417933 TGTACTTCCGTTCTACTCGCTC 59.582 50.000 0.00 0.00 0.00 5.03
265 266 2.430465 TGTACTTCCGTTCTACTCGCT 58.570 47.619 0.00 0.00 0.00 4.93
266 267 2.907910 TGTACTTCCGTTCTACTCGC 57.092 50.000 0.00 0.00 0.00 5.03
267 268 4.675190 TCTTGTACTTCCGTTCTACTCG 57.325 45.455 0.00 0.00 0.00 4.18
268 269 6.192234 TGATCTTGTACTTCCGTTCTACTC 57.808 41.667 0.00 0.00 0.00 2.59
297 298 3.142787 TGATGAGGTCCATGGAGAGGATA 59.857 47.826 16.81 0.00 37.52 2.59
298 299 2.090324 TGATGAGGTCCATGGAGAGGAT 60.090 50.000 16.81 5.28 37.52 3.24
299 300 1.291939 TGATGAGGTCCATGGAGAGGA 59.708 52.381 16.81 0.00 35.17 3.71
300 301 1.415659 GTGATGAGGTCCATGGAGAGG 59.584 57.143 16.81 0.00 35.17 3.69
301 302 2.113807 TGTGATGAGGTCCATGGAGAG 58.886 52.381 16.81 0.00 35.17 3.20
302 303 2.252535 TGTGATGAGGTCCATGGAGA 57.747 50.000 16.81 0.00 35.17 3.71
641 644 4.436998 GCTGACGGGGTGGAGACG 62.437 72.222 0.00 0.00 0.00 4.18
642 645 4.436998 CGCTGACGGGGTGGAGAC 62.437 72.222 0.00 0.00 34.97 3.36
672 675 2.993899 ACGAGCTCATACCTCAAAAACG 59.006 45.455 15.40 0.00 0.00 3.60
906 910 4.985538 AGCTCTCCACAATACCTTGAAAA 58.014 39.130 0.00 0.00 36.20 2.29
965 969 3.259374 TCAGGCGAAAGATTCTTCTCACT 59.741 43.478 0.00 0.00 0.00 3.41
1089 1093 3.142838 ATGCTTGGCGCCATGGTC 61.143 61.111 35.18 23.38 38.05 4.02
1316 1320 1.062581 TCTCCTCCTCCTCCTCAATGG 60.063 57.143 0.00 0.00 37.10 3.16
1505 1509 0.108898 CTTGCTGACCTCACTCTCGG 60.109 60.000 0.00 0.00 0.00 4.63
1779 1783 3.132289 CAGCCTCTTCGTACTTTCCCATA 59.868 47.826 0.00 0.00 0.00 2.74
1797 1801 1.439679 GTTGTAGCACAGGTACAGCC 58.560 55.000 10.73 3.27 45.16 4.85
1809 1813 1.022735 TCTCGAGGGATCGTTGTAGC 58.977 55.000 13.56 0.00 0.00 3.58
1878 1882 1.046204 TGTCACCCAATTGCATGCAA 58.954 45.000 33.57 33.57 40.47 4.08
1893 1897 2.329267 CCTAGCATCCCATAGGTGTCA 58.671 52.381 0.00 0.00 34.92 3.58
1956 1960 2.173356 CCCCAATGTCTGCTTCTGGATA 59.827 50.000 0.00 0.00 0.00 2.59
2661 2665 4.570369 TCATATGCATCGCCATAATTACCG 59.430 41.667 0.19 0.00 31.96 4.02
2664 2668 5.817296 GGAGTCATATGCATCGCCATAATTA 59.183 40.000 0.19 0.00 31.96 1.40
2931 2935 6.564328 AGAAACAACTTGACAAGGAAATCAC 58.436 36.000 19.16 5.49 0.00 3.06
2937 2941 9.793259 ATTATAGAAGAAACAACTTGACAAGGA 57.207 29.630 19.16 0.00 0.00 3.36
2962 2966 8.297470 AGAAACATGTATGGTCTATTTTGCAT 57.703 30.769 0.00 0.00 0.00 3.96
3099 3104 2.044650 AGGTGCGCATGGAAGCAT 60.045 55.556 15.91 0.00 45.69 3.79
3143 3149 1.064463 TGAGAGCACCCAAATGGATCC 60.064 52.381 4.20 4.20 37.39 3.36
3155 3206 3.843999 CCTAGTTGAGACTTGAGAGCAC 58.156 50.000 0.00 0.00 37.33 4.40
3252 3303 5.277058 GCTCGACAGTTGCCATTTATAAGAG 60.277 44.000 0.00 0.00 0.00 2.85
3284 3335 4.479619 CAAGCTGGAAGATGCTAAACAAC 58.520 43.478 0.00 0.00 38.75 3.32
3365 3416 1.067060 GGCCCAACTTTATCGCAATCC 59.933 52.381 0.00 0.00 0.00 3.01
3514 3566 6.127897 GGTCTAACAAAGCAGCATGAAGTTAT 60.128 38.462 0.00 0.00 39.69 1.89
3515 3567 5.181245 GGTCTAACAAAGCAGCATGAAGTTA 59.819 40.000 0.00 1.62 39.69 2.24
3669 3721 8.853077 TCTTAATCTCAGATTTGCTTTCAGAA 57.147 30.769 4.90 0.00 0.00 3.02
3737 3789 7.271511 TGGCAACACAAAAGAACAGAAATATT 58.728 30.769 0.00 0.00 46.17 1.28
3818 3870 1.304381 TGGGTTCGCCGTACCTAGT 60.304 57.895 12.74 0.00 38.45 2.57
3887 3939 1.261238 CCTTCCTGCTTCTCCCTCGT 61.261 60.000 0.00 0.00 0.00 4.18
3890 3942 1.136329 TTGCCTTCCTGCTTCTCCCT 61.136 55.000 0.00 0.00 0.00 4.20
3972 4024 3.454371 AAAGCTGTAGTTCACTCACGT 57.546 42.857 0.00 0.00 0.00 4.49
4069 4121 3.560636 AACGCTACTGCTATTCCCATT 57.439 42.857 0.00 0.00 36.97 3.16
4080 4132 4.659088 TCTCGATACTCAAAACGCTACTG 58.341 43.478 0.00 0.00 0.00 2.74
4267 4326 9.288576 AGATCATTTTTGTGTCATCTAAACAGA 57.711 29.630 0.00 0.00 0.00 3.41
4295 4354 5.163903 CCTTTGCAACTTTACAACAACCAAC 60.164 40.000 0.00 0.00 0.00 3.77
4299 4358 4.180817 AGCCTTTGCAACTTTACAACAAC 58.819 39.130 0.00 0.00 41.13 3.32
4322 4381 6.926630 TTAAAAGGCATTCCTGGTGTTAAT 57.073 33.333 0.00 0.00 43.40 1.40
4326 4385 3.055891 GCATTAAAAGGCATTCCTGGTGT 60.056 43.478 0.00 0.00 43.40 4.16
4356 4416 3.095685 CGAAAAAGATCGCACTCACTG 57.904 47.619 0.00 0.00 35.85 3.66
4454 4719 9.935682 CTCGCTTGTTAATGTATTTAATCATGT 57.064 29.630 0.00 0.00 32.56 3.21
4532 4797 9.462174 TGTGTGTAAAATTTCATGAGAAACATC 57.538 29.630 0.00 0.00 45.79 3.06
4651 4918 7.230510 TGAGCAAGTAATAACAAGTGGAATGTT 59.769 33.333 0.00 0.00 43.14 2.71
4655 4922 6.204688 CACTGAGCAAGTAATAACAAGTGGAA 59.795 38.462 0.00 0.00 36.83 3.53
4701 4968 0.736053 GGCGAAACACCTGTTCAACA 59.264 50.000 0.00 0.00 37.25 3.33
4753 5020 4.808414 TGTGCTAGAGTTGCTCTAACAT 57.192 40.909 11.03 0.00 41.74 2.71
4773 5040 7.531871 GGATGTCGATTCAAATTATGTCGATTG 59.468 37.037 7.93 0.00 38.37 2.67
4819 5086 3.287222 TGGGTAGCCTGCAAATCATTAC 58.713 45.455 13.11 0.00 0.00 1.89
4839 5106 2.260869 CGTGTTTGCCCCCAGTCTG 61.261 63.158 0.00 0.00 0.00 3.51
4840 5107 1.412453 TACGTGTTTGCCCCCAGTCT 61.412 55.000 0.00 0.00 0.00 3.24
4842 5109 0.111639 AATACGTGTTTGCCCCCAGT 59.888 50.000 0.00 0.00 0.00 4.00
4848 5115 2.953640 TTGTCGAATACGTGTTTGCC 57.046 45.000 7.38 0.00 40.69 4.52
4857 5124 4.892655 TGAATCATGCGTTTGTCGAATAC 58.107 39.130 0.00 0.00 42.86 1.89
4874 5141 2.224646 GGGAGCTTGGGGAGTATGAATC 60.225 54.545 0.00 0.00 0.00 2.52
4875 5142 1.777272 GGGAGCTTGGGGAGTATGAAT 59.223 52.381 0.00 0.00 0.00 2.57
4899 5166 2.367512 ACATGGGAGGAGGGAGGC 60.368 66.667 0.00 0.00 0.00 4.70
4914 5181 4.077184 GATGCGTGGTCGGGGACA 62.077 66.667 0.00 0.00 37.56 4.02
4949 5217 1.997874 AGCGGCATCTTTCTCCCCT 60.998 57.895 1.45 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.