Multiple sequence alignment - TraesCS6D01G251900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G251900 chr6D 100.000 7669 0 0 1 7669 355877673 355870005 0.000000e+00 14163.0
1 TraesCS6D01G251900 chr6D 92.913 381 22 4 192 569 421064150 421063772 4.050000e-152 549.0
2 TraesCS6D01G251900 chr6D 90.331 393 34 3 175 564 100482229 100481838 5.310000e-141 512.0
3 TraesCS6D01G251900 chr6D 98.582 141 1 1 1 140 219229051 219229191 1.650000e-61 248.0
4 TraesCS6D01G251900 chr6D 85.492 193 24 2 5021 5209 237817228 237817036 1.690000e-46 198.0
5 TraesCS6D01G251900 chr6D 93.878 49 3 0 4953 5001 34019228 34019180 2.970000e-09 75.0
6 TraesCS6D01G251900 chr6D 100.000 38 0 0 4961 4998 430446605 430446642 3.840000e-08 71.3
7 TraesCS6D01G251900 chr6D 92.000 50 4 0 4952 5001 466538237 466538188 3.840000e-08 71.3
8 TraesCS6D01G251900 chr6D 97.500 40 1 0 4959 4998 57898594 57898633 1.380000e-07 69.4
9 TraesCS6D01G251900 chr6D 97.436 39 1 0 4960 4998 88882935 88882973 4.970000e-07 67.6
10 TraesCS6D01G251900 chr6D 97.297 37 0 1 5292 5328 8498068 8498033 2.310000e-05 62.1
11 TraesCS6D01G251900 chr6D 97.297 37 0 1 5292 5328 8836301 8836336 2.310000e-05 62.1
12 TraesCS6D01G251900 chr6D 100.000 33 0 0 5292 5324 26936942 26936974 2.310000e-05 62.1
13 TraesCS6D01G251900 chr6D 100.000 33 0 0 5292 5324 321495989 321495957 2.310000e-05 62.1
14 TraesCS6D01G251900 chr6D 100.000 33 0 0 5292 5324 358766795 358766827 2.310000e-05 62.1
15 TraesCS6D01G251900 chr6D 100.000 31 0 0 5294 5324 7795502 7795532 2.990000e-04 58.4
16 TraesCS6D01G251900 chr6D 100.000 31 0 0 5294 5324 119666806 119666776 2.990000e-04 58.4
17 TraesCS6D01G251900 chr6D 100.000 31 0 0 5294 5324 324166665 324166635 2.990000e-04 58.4
18 TraesCS6D01G251900 chr6D 100.000 31 0 0 5294 5324 348606156 348606126 2.990000e-04 58.4
19 TraesCS6D01G251900 chr6D 100.000 28 0 0 5264 5291 7795457 7795484 1.400000e-02 52.8
20 TraesCS6D01G251900 chr6D 100.000 28 0 0 5264 5291 115044566 115044593 1.400000e-02 52.8
21 TraesCS6D01G251900 chr6D 100.000 28 0 0 5264 5291 269191141 269191168 1.400000e-02 52.8
22 TraesCS6D01G251900 chr6D 100.000 28 0 0 5264 5291 272859326 272859299 1.400000e-02 52.8
23 TraesCS6D01G251900 chr6D 100.000 28 0 0 5264 5291 309582925 309582898 1.400000e-02 52.8
24 TraesCS6D01G251900 chr6D 100.000 28 0 0 5264 5291 327006507 327006534 1.400000e-02 52.8
25 TraesCS6D01G251900 chr6D 100.000 28 0 0 5264 5291 335426943 335426916 1.400000e-02 52.8
26 TraesCS6D01G251900 chr6A 96.251 4161 111 20 562 4718 498594009 498589890 0.000000e+00 6778.0
27 TraesCS6D01G251900 chr6A 93.019 1991 106 15 5696 7669 498588939 498586965 0.000000e+00 2876.0
28 TraesCS6D01G251900 chr6A 89.852 542 30 11 4709 5250 498589773 498589257 0.000000e+00 673.0
29 TraesCS6D01G251900 chr6A 88.822 331 17 6 5354 5671 498589259 498588936 9.330000e-104 388.0
30 TraesCS6D01G251900 chr6A 97.619 42 1 0 4957 4998 399220822 399220863 1.070000e-08 73.1
31 TraesCS6D01G251900 chr6A 100.000 28 0 0 5264 5291 28142718 28142745 1.400000e-02 52.8
32 TraesCS6D01G251900 chr6B 92.509 2336 113 28 5354 7664 536843649 536841351 0.000000e+00 3288.0
33 TraesCS6D01G251900 chr6B 97.520 1895 40 2 562 2456 536848380 536846493 0.000000e+00 3232.0
34 TraesCS6D01G251900 chr6B 93.907 1953 67 27 2481 4420 536846337 536844424 0.000000e+00 2900.0
35 TraesCS6D01G251900 chr6B 85.199 777 86 16 4493 5250 536844413 536843647 0.000000e+00 771.0
36 TraesCS6D01G251900 chr6B 88.235 187 21 1 5021 5206 374970251 374970437 1.000000e-53 222.0
37 TraesCS6D01G251900 chr6B 96.721 61 1 1 5264 5324 335976187 335976128 4.900000e-17 100.0
38 TraesCS6D01G251900 chr6B 93.443 61 2 1 5264 5324 493033380 493033322 1.060000e-13 89.8
39 TraesCS6D01G251900 chr6B 90.769 65 2 2 5264 5324 210130651 210130715 4.930000e-12 84.2
40 TraesCS6D01G251900 chr6B 90.476 63 2 2 5264 5322 544455731 544455793 6.380000e-11 80.5
41 TraesCS6D01G251900 chr6B 100.000 41 0 0 4958 4998 166127580 166127620 8.250000e-10 76.8
42 TraesCS6D01G251900 chr6B 97.619 42 1 0 133 174 536848412 536848371 1.070000e-08 73.1
43 TraesCS6D01G251900 chr6B 91.837 49 4 0 4961 5009 710231642 710231594 1.380000e-07 69.4
44 TraesCS6D01G251900 chr1D 93.781 402 18 6 167 562 55033265 55033665 1.420000e-166 597.0
45 TraesCS6D01G251900 chr1D 86.301 73 2 1 5261 5325 446276687 446276759 1.070000e-08 73.1
46 TraesCS6D01G251900 chr1D 95.349 43 2 0 4959 5001 298620954 298620912 1.380000e-07 69.4
47 TraesCS6D01G251900 chr1D 87.500 56 4 3 4958 5010 46636429 46636484 2.310000e-05 62.1
48 TraesCS6D01G251900 chr1D 100.000 33 0 0 5292 5324 264639951 264639919 2.310000e-05 62.1
49 TraesCS6D01G251900 chr1D 100.000 33 0 0 5292 5324 283320109 283320077 2.310000e-05 62.1
50 TraesCS6D01G251900 chr1D 100.000 33 0 0 5292 5324 327548766 327548798 2.310000e-05 62.1
51 TraesCS6D01G251900 chr1D 96.875 32 1 0 5261 5292 113906680 113906711 4.000000e-03 54.7
52 TraesCS6D01G251900 chr5D 93.909 394 20 3 173 563 417034908 417035300 6.630000e-165 592.0
53 TraesCS6D01G251900 chr5D 100.000 40 0 0 4959 4998 262513716 262513755 2.970000e-09 75.0
54 TraesCS6D01G251900 chr5D 95.455 44 2 0 4961 5004 231600497 231600540 3.840000e-08 71.3
55 TraesCS6D01G251900 chr2D 93.862 391 20 3 175 562 338338891 338338502 3.080000e-163 586.0
56 TraesCS6D01G251900 chr2D 91.560 391 28 4 175 562 541464691 541465079 1.130000e-147 534.0
57 TraesCS6D01G251900 chr2D 90.909 396 31 4 175 566 352214391 352213997 1.900000e-145 527.0
58 TraesCS6D01G251900 chr2D 99.275 138 1 0 1 138 536263067 536262930 4.590000e-62 250.0
59 TraesCS6D01G251900 chr2D 97.887 142 3 0 1 142 375990699 375990840 5.940000e-61 246.0
60 TraesCS6D01G251900 chr2D 93.651 63 2 2 5264 5324 196832199 196832261 8.190000e-15 93.5
61 TraesCS6D01G251900 chr4D 91.858 393 26 5 174 562 94599654 94600044 1.880000e-150 544.0
62 TraesCS6D01G251900 chr4D 90.281 391 34 3 175 562 308755630 308756019 6.870000e-140 508.0
63 TraesCS6D01G251900 chr4D 93.333 45 3 0 4957 5001 94883432 94883388 4.970000e-07 67.6
64 TraesCS6D01G251900 chrUn 98.582 141 0 2 1 139 291740523 291740383 1.650000e-61 248.0
65 TraesCS6D01G251900 chrUn 95.238 42 2 0 4960 5001 8484440 8484399 4.970000e-07 67.6
66 TraesCS6D01G251900 chrUn 97.368 38 1 0 4961 4998 12894000 12894037 1.790000e-06 65.8
67 TraesCS6D01G251900 chrUn 93.333 45 2 1 4954 4998 37406962 37406919 1.790000e-06 65.8
68 TraesCS6D01G251900 chrUn 93.182 44 3 0 4958 5001 50416667 50416624 1.790000e-06 65.8
69 TraesCS6D01G251900 chrUn 95.122 41 2 0 4961 5001 67413436 67413396 1.790000e-06 65.8
70 TraesCS6D01G251900 chrUn 97.368 38 1 0 4961 4998 108971453 108971490 1.790000e-06 65.8
71 TraesCS6D01G251900 chrUn 97.368 38 1 0 4961 4998 267452865 267452902 1.790000e-06 65.8
72 TraesCS6D01G251900 chrUn 97.368 38 1 0 4961 4998 340256233 340256270 1.790000e-06 65.8
73 TraesCS6D01G251900 chrUn 95.122 41 2 0 4961 5001 347805190 347805150 1.790000e-06 65.8
74 TraesCS6D01G251900 chrUn 96.970 33 1 0 5292 5324 59655803 59655771 1.000000e-03 56.5
75 TraesCS6D01G251900 chrUn 100.000 28 0 0 5264 5291 24221083 24221110 1.400000e-02 52.8
76 TraesCS6D01G251900 chrUn 100.000 28 0 0 5264 5291 476757010 476757037 1.400000e-02 52.8
77 TraesCS6D01G251900 chr7D 98.571 140 2 0 1 140 195291235 195291096 1.650000e-61 248.0
78 TraesCS6D01G251900 chr7D 93.865 163 7 2 1 160 562346987 562347149 7.690000e-60 243.0
79 TraesCS6D01G251900 chr7D 100.000 30 0 0 5262 5291 534359249 534359278 1.000000e-03 56.5
80 TraesCS6D01G251900 chr7D 96.774 31 1 0 5261 5291 447693559 447693589 1.400000e-02 52.8
81 TraesCS6D01G251900 chr3D 96.078 153 3 3 1 151 141173925 141174076 5.940000e-61 246.0
82 TraesCS6D01G251900 chr3D 96.000 150 4 1 1 148 228794520 228794371 7.690000e-60 243.0
83 TraesCS6D01G251900 chr3D 86.885 61 0 6 5264 5324 22461308 22461360 2.310000e-05 62.1
84 TraesCS6D01G251900 chr5A 92.216 167 5 5 1 160 159605767 159605932 5.990000e-56 230.0
85 TraesCS6D01G251900 chr2A 85.340 191 24 4 5021 5209 285617405 285617217 2.180000e-45 195.0
86 TraesCS6D01G251900 chr2A 92.188 64 2 1 5264 5324 712286620 712286683 3.810000e-13 87.9
87 TraesCS6D01G251900 chr3B 81.313 198 16 6 5021 5217 417495465 417495642 2.890000e-29 141.0
88 TraesCS6D01G251900 chr3B 90.566 53 3 2 4961 5011 607809449 607809397 1.380000e-07 69.4
89 TraesCS6D01G251900 chr7B 95.082 61 1 2 5264 5324 476990561 476990503 2.280000e-15 95.3
90 TraesCS6D01G251900 chr7B 88.889 63 3 2 5264 5322 510883918 510883856 2.970000e-09 75.0
91 TraesCS6D01G251900 chr7B 90.385 52 3 2 4950 5001 228837967 228837918 4.970000e-07 67.6
92 TraesCS6D01G251900 chr7A 93.443 61 2 2 5264 5324 70937335 70937277 1.060000e-13 89.8
93 TraesCS6D01G251900 chr5B 93.443 61 2 2 5264 5324 680503395 680503453 1.060000e-13 89.8
94 TraesCS6D01G251900 chr5B 97.561 41 1 0 4958 4998 502503906 502503946 3.840000e-08 71.3
95 TraesCS6D01G251900 chr5B 95.455 44 2 0 4958 5001 591529291 591529248 3.840000e-08 71.3
96 TraesCS6D01G251900 chr5B 90.000 50 4 1 4949 4998 352488608 352488656 6.420000e-06 63.9
97 TraesCS6D01G251900 chr5B 100.000 29 0 0 5264 5292 327750266 327750294 4.000000e-03 54.7
98 TraesCS6D01G251900 chr1B 90.769 65 2 2 5264 5324 451312032 451312096 4.930000e-12 84.2
99 TraesCS6D01G251900 chr1B 89.286 56 4 2 4954 5007 428191384 428191329 1.380000e-07 69.4
100 TraesCS6D01G251900 chr1B 85.507 69 2 4 5264 5324 525502051 525502119 1.790000e-06 65.8
101 TraesCS6D01G251900 chr4B 95.455 44 2 0 4958 5001 1770217 1770174 3.840000e-08 71.3
102 TraesCS6D01G251900 chr4B 91.837 49 4 0 4961 5009 124018918 124018870 1.380000e-07 69.4
103 TraesCS6D01G251900 chr4B 86.765 68 2 1 5264 5324 128024787 128024720 1.380000e-07 69.4
104 TraesCS6D01G251900 chr4B 93.333 45 3 0 4957 5001 158699502 158699458 4.970000e-07 67.6
105 TraesCS6D01G251900 chr2B 90.741 54 3 2 4945 4998 584129388 584129439 3.840000e-08 71.3
106 TraesCS6D01G251900 chr1A 88.525 61 4 1 5264 5324 427324709 427324766 3.840000e-08 71.3
107 TraesCS6D01G251900 chr1A 96.875 32 1 0 5264 5295 589815014 589814983 4.000000e-03 54.7
108 TraesCS6D01G251900 chr1A 96.875 32 0 1 5264 5294 84310273 84310242 1.400000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G251900 chr6D 355870005 355877673 7668 True 14163.00 14163 100.0000 1 7669 1 chr6D.!!$R12 7668
1 TraesCS6D01G251900 chr6A 498586965 498594009 7044 True 2678.75 6778 91.9860 562 7669 4 chr6A.!!$R1 7107
2 TraesCS6D01G251900 chr6B 536841351 536848412 7061 True 2052.82 3288 93.3508 133 7664 5 chr6B.!!$R4 7531


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
441 442 0.107456 CTATCTGGGAGGCGTTGCAT 59.893 55.000 0.00 0.00 0.00 3.96 F
443 444 0.107456 ATCTGGGAGGCGTTGCATAG 59.893 55.000 0.00 0.00 0.00 2.23 F
491 492 0.478507 ACACAAAAGGGTCAGGGGAG 59.521 55.000 0.00 0.00 0.00 4.30 F
1818 1819 0.543749 AGGTAAGGCTGATGCAGGAC 59.456 55.000 0.00 0.00 41.91 3.85 F
2207 2208 0.896940 CAAGCTGCCTCCAACCACAT 60.897 55.000 0.00 0.00 0.00 3.21 F
2407 2408 0.986019 ACCGGATACAGGGATTGGCA 60.986 55.000 9.46 0.00 35.02 4.92 F
3120 3258 1.870055 CTCCAAGCAATGCGGCAGTT 61.870 55.000 9.25 0.26 35.83 3.16 F
3847 3985 2.161855 GTGTCAGGTCAATTGCATGGA 58.838 47.619 12.34 0.00 0.00 3.41 F
3943 4081 2.564947 AGTCATGGACTTCACTCAGGAC 59.435 50.000 0.00 0.00 40.28 3.85 F
4935 5221 3.132111 GGGAGGAGTCAATGAGAGAGAAC 59.868 52.174 0.00 0.00 0.00 3.01 F
4976 5262 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12 F
4978 5264 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2207 2208 1.065410 ACCATGTCCCCAGGTGACAA 61.065 55.000 9.04 0.0 45.15 3.18 R
2407 2408 8.023021 TGAATACCTCATAAGTAAGTGCATCT 57.977 34.615 0.00 0.0 0.00 2.90 R
2607 2740 0.033208 TCCCCATTTCATGCCCACTC 60.033 55.000 0.00 0.0 0.00 3.51 R
2820 2958 1.331756 GCTACCACATCAATGGAAGCG 59.668 52.381 0.00 0.0 43.02 4.68 R
4033 4172 1.274416 ACCAATGAGCTAGGGAAGGGA 60.274 52.381 0.00 0.0 0.00 4.20 R
4039 4179 3.798202 GTAGTGAACCAATGAGCTAGGG 58.202 50.000 0.00 0.0 0.00 3.53 R
4963 5249 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.0 0.00 4.20 R
4964 5250 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.0 0.00 4.30 R
4965 5251 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.0 0.00 4.30 R
6082 6402 2.286872 GAGACACTCCTGCAATCATGG 58.713 52.381 0.00 0.0 0.00 3.66 R
6174 6494 2.856988 AACCCCGGAAAGCCCTGA 60.857 61.111 0.73 0.0 0.00 3.86 R
6800 7123 3.226429 GACAGGCACGTCTGAGGCA 62.226 63.158 10.93 0.0 38.11 4.75 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.255394 TCTGTTTGTCTATGTATTCACACATG 57.745 34.615 0.00 0.00 39.46 3.21
26 27 7.877612 TCTGTTTGTCTATGTATTCACACATGT 59.122 33.333 0.00 0.00 39.46 3.21
27 28 9.150348 CTGTTTGTCTATGTATTCACACATGTA 57.850 33.333 0.00 0.00 39.46 2.29
28 29 9.665719 TGTTTGTCTATGTATTCACACATGTAT 57.334 29.630 0.00 0.00 39.46 2.29
38 39 8.608317 TGTATTCACACATGTATTATGTTTCCG 58.392 33.333 0.00 0.00 0.00 4.30
39 40 6.429791 TTCACACATGTATTATGTTTCCGG 57.570 37.500 0.00 0.00 0.00 5.14
40 41 5.492895 TCACACATGTATTATGTTTCCGGT 58.507 37.500 0.00 0.00 0.00 5.28
41 42 5.941058 TCACACATGTATTATGTTTCCGGTT 59.059 36.000 0.00 0.00 0.00 4.44
42 43 7.104290 TCACACATGTATTATGTTTCCGGTTA 58.896 34.615 0.00 0.00 0.00 2.85
43 44 7.606839 TCACACATGTATTATGTTTCCGGTTAA 59.393 33.333 0.00 0.00 0.00 2.01
44 45 8.402472 CACACATGTATTATGTTTCCGGTTAAT 58.598 33.333 0.00 1.95 0.00 1.40
45 46 9.616156 ACACATGTATTATGTTTCCGGTTAATA 57.384 29.630 0.00 0.00 0.00 0.98
46 47 9.872757 CACATGTATTATGTTTCCGGTTAATAC 57.127 33.333 0.00 12.47 37.73 1.89
47 48 9.616156 ACATGTATTATGTTTCCGGTTAATACA 57.384 29.630 22.83 22.83 44.85 2.29
55 56 7.311364 TGTTTCCGGTTAATACAATTCTAGC 57.689 36.000 0.00 0.00 0.00 3.42
56 57 6.879993 TGTTTCCGGTTAATACAATTCTAGCA 59.120 34.615 0.00 0.00 0.00 3.49
57 58 7.554835 TGTTTCCGGTTAATACAATTCTAGCAT 59.445 33.333 0.00 0.00 0.00 3.79
58 59 7.490962 TTCCGGTTAATACAATTCTAGCATG 57.509 36.000 0.00 0.00 0.00 4.06
59 60 6.822442 TCCGGTTAATACAATTCTAGCATGA 58.178 36.000 0.00 0.00 0.00 3.07
60 61 7.276658 TCCGGTTAATACAATTCTAGCATGAA 58.723 34.615 0.00 0.00 0.00 2.57
61 62 7.936847 TCCGGTTAATACAATTCTAGCATGAAT 59.063 33.333 0.00 0.00 38.19 2.57
62 63 9.214957 CCGGTTAATACAATTCTAGCATGAATA 57.785 33.333 0.00 0.00 35.82 1.75
137 138 2.158325 GGGCATATTTCCTTCATCCCCA 60.158 50.000 0.00 0.00 0.00 4.96
164 165 1.153353 TTTGGACGAACGGAATCAGC 58.847 50.000 0.00 0.00 0.00 4.26
165 166 0.672401 TTGGACGAACGGAATCAGCC 60.672 55.000 0.00 0.00 0.00 4.85
166 167 1.814169 GGACGAACGGAATCAGCCC 60.814 63.158 0.00 0.00 0.00 5.19
167 168 1.218316 GACGAACGGAATCAGCCCT 59.782 57.895 0.00 0.00 0.00 5.19
168 169 1.079127 ACGAACGGAATCAGCCCTG 60.079 57.895 0.00 0.00 0.00 4.45
169 170 2.464459 CGAACGGAATCAGCCCTGC 61.464 63.158 0.00 0.00 0.00 4.85
170 171 2.044946 AACGGAATCAGCCCTGCC 60.045 61.111 0.00 0.00 0.00 4.85
171 172 3.976701 AACGGAATCAGCCCTGCCG 62.977 63.158 10.08 10.08 46.83 5.69
173 174 3.797353 GGAATCAGCCCTGCCGGA 61.797 66.667 5.05 0.00 0.00 5.14
174 175 2.203126 GAATCAGCCCTGCCGGAG 60.203 66.667 5.05 0.00 0.00 4.63
188 189 2.810439 CCGGAGGCAAATTTGACAAA 57.190 45.000 25.59 2.48 46.14 2.83
189 190 3.317603 CCGGAGGCAAATTTGACAAAT 57.682 42.857 25.59 7.62 46.14 2.32
190 191 3.663025 CCGGAGGCAAATTTGACAAATT 58.337 40.909 25.59 18.41 46.14 1.82
191 192 4.064388 CCGGAGGCAAATTTGACAAATTT 58.936 39.130 26.12 26.12 45.05 1.82
216 217 8.956533 TGACCTATAATCGAAATCAAATCACA 57.043 30.769 0.00 0.00 0.00 3.58
217 218 9.045223 TGACCTATAATCGAAATCAAATCACAG 57.955 33.333 0.00 0.00 0.00 3.66
218 219 9.261180 GACCTATAATCGAAATCAAATCACAGA 57.739 33.333 0.00 0.00 0.00 3.41
219 220 9.613428 ACCTATAATCGAAATCAAATCACAGAA 57.387 29.630 0.00 0.00 0.00 3.02
224 225 8.679288 AATCGAAATCAAATCACAGAATGAAC 57.321 30.769 0.00 0.00 41.93 3.18
225 226 7.439157 TCGAAATCAAATCACAGAATGAACT 57.561 32.000 0.00 0.00 41.93 3.01
226 227 7.300320 TCGAAATCAAATCACAGAATGAACTG 58.700 34.615 0.00 0.00 41.93 3.16
227 228 6.525628 CGAAATCAAATCACAGAATGAACTGG 59.474 38.462 0.00 0.00 41.93 4.00
228 229 6.906157 AATCAAATCACAGAATGAACTGGT 57.094 33.333 0.00 0.00 41.93 4.00
229 230 6.906157 ATCAAATCACAGAATGAACTGGTT 57.094 33.333 0.00 0.00 41.93 3.67
230 231 6.075762 TCAAATCACAGAATGAACTGGTTG 57.924 37.500 0.00 0.00 41.93 3.77
231 232 4.510038 AATCACAGAATGAACTGGTTGC 57.490 40.909 0.00 0.00 41.93 4.17
232 233 1.872952 TCACAGAATGAACTGGTTGCG 59.127 47.619 0.00 0.00 39.69 4.85
233 234 1.872952 CACAGAATGAACTGGTTGCGA 59.127 47.619 0.00 0.00 39.69 5.10
234 235 2.290367 CACAGAATGAACTGGTTGCGAA 59.710 45.455 0.00 0.00 39.69 4.70
235 236 2.948979 ACAGAATGAACTGGTTGCGAAA 59.051 40.909 0.00 0.00 39.69 3.46
236 237 3.243068 ACAGAATGAACTGGTTGCGAAAC 60.243 43.478 0.00 0.00 39.69 2.78
237 238 3.003689 CAGAATGAACTGGTTGCGAAACT 59.996 43.478 6.17 0.00 39.69 2.66
238 239 4.213270 CAGAATGAACTGGTTGCGAAACTA 59.787 41.667 6.17 0.00 39.69 2.24
239 240 5.003804 AGAATGAACTGGTTGCGAAACTAT 58.996 37.500 6.17 0.00 0.00 2.12
240 241 5.473504 AGAATGAACTGGTTGCGAAACTATT 59.526 36.000 6.17 0.00 0.00 1.73
241 242 5.705609 ATGAACTGGTTGCGAAACTATTT 57.294 34.783 6.17 0.00 0.00 1.40
242 243 5.103290 TGAACTGGTTGCGAAACTATTTC 57.897 39.130 13.74 13.74 36.32 2.17
243 244 4.576873 TGAACTGGTTGCGAAACTATTTCA 59.423 37.500 17.86 17.86 39.63 2.69
244 245 4.483476 ACTGGTTGCGAAACTATTTCAC 57.517 40.909 6.17 0.00 39.63 3.18
245 246 4.134563 ACTGGTTGCGAAACTATTTCACT 58.865 39.130 6.17 0.00 39.63 3.41
246 247 4.213482 ACTGGTTGCGAAACTATTTCACTC 59.787 41.667 6.17 0.00 39.63 3.51
247 248 3.500680 TGGTTGCGAAACTATTTCACTCC 59.499 43.478 6.17 1.39 39.63 3.85
248 249 3.119955 GGTTGCGAAACTATTTCACTCCC 60.120 47.826 6.17 0.00 39.63 4.30
249 250 2.706890 TGCGAAACTATTTCACTCCCC 58.293 47.619 2.50 0.00 39.63 4.81
250 251 2.304761 TGCGAAACTATTTCACTCCCCT 59.695 45.455 2.50 0.00 39.63 4.79
251 252 2.678336 GCGAAACTATTTCACTCCCCTG 59.322 50.000 2.50 0.00 39.63 4.45
252 253 3.618997 GCGAAACTATTTCACTCCCCTGA 60.619 47.826 2.50 0.00 39.63 3.86
253 254 3.933332 CGAAACTATTTCACTCCCCTGAC 59.067 47.826 2.50 0.00 39.63 3.51
254 255 4.262617 GAAACTATTTCACTCCCCTGACC 58.737 47.826 0.00 0.00 39.45 4.02
255 256 2.197465 ACTATTTCACTCCCCTGACCC 58.803 52.381 0.00 0.00 0.00 4.46
256 257 2.225908 ACTATTTCACTCCCCTGACCCT 60.226 50.000 0.00 0.00 0.00 4.34
257 258 1.760405 ATTTCACTCCCCTGACCCTT 58.240 50.000 0.00 0.00 0.00 3.95
258 259 1.529744 TTTCACTCCCCTGACCCTTT 58.470 50.000 0.00 0.00 0.00 3.11
259 260 1.529744 TTCACTCCCCTGACCCTTTT 58.470 50.000 0.00 0.00 0.00 2.27
260 261 0.771127 TCACTCCCCTGACCCTTTTG 59.229 55.000 0.00 0.00 0.00 2.44
261 262 0.478507 CACTCCCCTGACCCTTTTGT 59.521 55.000 0.00 0.00 0.00 2.83
262 263 0.478507 ACTCCCCTGACCCTTTTGTG 59.521 55.000 0.00 0.00 0.00 3.33
263 264 0.478507 CTCCCCTGACCCTTTTGTGT 59.521 55.000 0.00 0.00 0.00 3.72
264 265 1.702957 CTCCCCTGACCCTTTTGTGTA 59.297 52.381 0.00 0.00 0.00 2.90
265 266 1.702957 TCCCCTGACCCTTTTGTGTAG 59.297 52.381 0.00 0.00 0.00 2.74
266 267 1.534729 CCCTGACCCTTTTGTGTAGC 58.465 55.000 0.00 0.00 0.00 3.58
267 268 1.156736 CCTGACCCTTTTGTGTAGCG 58.843 55.000 0.00 0.00 0.00 4.26
268 269 0.517316 CTGACCCTTTTGTGTAGCGC 59.483 55.000 0.00 0.00 0.00 5.92
269 270 0.887387 TGACCCTTTTGTGTAGCGCC 60.887 55.000 2.29 0.00 0.00 6.53
270 271 1.583495 GACCCTTTTGTGTAGCGCCC 61.583 60.000 2.29 0.00 0.00 6.13
271 272 1.602323 CCCTTTTGTGTAGCGCCCA 60.602 57.895 2.29 0.00 0.00 5.36
272 273 1.586154 CCCTTTTGTGTAGCGCCCAG 61.586 60.000 2.29 0.00 0.00 4.45
273 274 1.586154 CCTTTTGTGTAGCGCCCAGG 61.586 60.000 2.29 0.00 0.00 4.45
274 275 2.200170 CTTTTGTGTAGCGCCCAGGC 62.200 60.000 2.29 0.00 37.85 4.85
285 286 4.087892 CCCAGGCGCTGCACTAGT 62.088 66.667 7.64 0.00 0.00 2.57
286 287 2.816958 CCAGGCGCTGCACTAGTG 60.817 66.667 18.93 18.93 39.95 2.74
296 297 3.566261 CACTAGTGCAACGCCCAG 58.434 61.111 10.54 0.00 45.86 4.45
297 298 1.005037 CACTAGTGCAACGCCCAGA 60.005 57.895 10.54 0.00 45.86 3.86
298 299 0.602638 CACTAGTGCAACGCCCAGAA 60.603 55.000 10.54 0.00 45.86 3.02
299 300 0.320771 ACTAGTGCAACGCCCAGAAG 60.321 55.000 0.00 0.00 45.86 2.85
300 301 1.639298 CTAGTGCAACGCCCAGAAGC 61.639 60.000 0.00 0.00 45.86 3.86
301 302 2.111999 TAGTGCAACGCCCAGAAGCT 62.112 55.000 0.00 0.00 45.86 3.74
302 303 1.671054 GTGCAACGCCCAGAAGCTA 60.671 57.895 0.00 0.00 0.00 3.32
303 304 1.375908 TGCAACGCCCAGAAGCTAG 60.376 57.895 0.00 0.00 0.00 3.42
304 305 2.109126 GCAACGCCCAGAAGCTAGG 61.109 63.158 0.00 0.00 0.00 3.02
305 306 2.109126 CAACGCCCAGAAGCTAGGC 61.109 63.158 6.87 6.87 43.53 3.93
316 317 2.496817 GCTAGGCGCTGCACTAGT 59.503 61.111 21.78 0.00 39.07 2.57
317 318 1.880340 GCTAGGCGCTGCACTAGTG 60.880 63.158 18.93 18.93 39.07 2.74
327 328 3.566261 CACTAGTGCAACGCCCAG 58.434 61.111 10.54 0.00 45.86 4.45
328 329 2.034879 CACTAGTGCAACGCCCAGG 61.035 63.158 10.54 0.00 45.86 4.45
329 330 2.214216 ACTAGTGCAACGCCCAGGA 61.214 57.895 0.00 0.00 45.86 3.86
330 331 1.448540 CTAGTGCAACGCCCAGGAG 60.449 63.158 0.00 0.00 45.86 3.69
331 332 3.605749 TAGTGCAACGCCCAGGAGC 62.606 63.158 0.00 0.00 45.86 4.70
333 334 3.318384 TGCAACGCCCAGGAGCTA 61.318 61.111 0.00 0.00 0.00 3.32
334 335 2.512515 GCAACGCCCAGGAGCTAG 60.513 66.667 0.00 0.00 0.00 3.42
335 336 2.187946 CAACGCCCAGGAGCTAGG 59.812 66.667 0.00 0.00 0.00 3.02
336 337 3.787001 AACGCCCAGGAGCTAGGC 61.787 66.667 6.50 6.50 43.53 3.93
347 348 3.494336 GCTAGGCGCTGCACTGTG 61.494 66.667 7.64 2.76 35.14 3.66
348 349 2.047844 CTAGGCGCTGCACTGTGT 60.048 61.111 7.64 0.00 0.00 3.72
349 350 1.215382 CTAGGCGCTGCACTGTGTA 59.785 57.895 7.64 3.78 0.00 2.90
350 351 0.803768 CTAGGCGCTGCACTGTGTAG 60.804 60.000 19.77 19.77 33.01 2.74
351 352 1.532604 TAGGCGCTGCACTGTGTAGT 61.533 55.000 23.60 9.32 37.75 2.73
359 360 2.030562 ACTGTGTAGTGTGGCGCC 59.969 61.111 22.73 22.73 35.34 6.53
360 361 2.343758 CTGTGTAGTGTGGCGCCT 59.656 61.111 29.70 9.99 0.00 5.52
361 362 1.183030 ACTGTGTAGTGTGGCGCCTA 61.183 55.000 29.70 14.39 35.34 3.93
362 363 0.458543 CTGTGTAGTGTGGCGCCTAG 60.459 60.000 29.70 7.79 0.00 3.02
375 376 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
376 377 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
377 378 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
378 379 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
388 389 4.081030 CGCTGCACGCTGACTTGG 62.081 66.667 0.00 0.00 36.13 3.61
389 390 4.395583 GCTGCACGCTGACTTGGC 62.396 66.667 0.00 0.00 35.14 4.52
390 391 3.730761 CTGCACGCTGACTTGGCC 61.731 66.667 0.00 0.00 0.00 5.36
391 392 4.560743 TGCACGCTGACTTGGCCA 62.561 61.111 0.00 0.00 0.00 5.36
392 393 4.030452 GCACGCTGACTTGGCCAC 62.030 66.667 3.88 0.00 0.00 5.01
393 394 2.591429 CACGCTGACTTGGCCACA 60.591 61.111 3.88 0.00 0.00 4.17
394 395 1.968017 CACGCTGACTTGGCCACAT 60.968 57.895 3.88 0.00 0.00 3.21
395 396 0.673333 CACGCTGACTTGGCCACATA 60.673 55.000 3.88 0.00 0.00 2.29
396 397 0.253044 ACGCTGACTTGGCCACATAT 59.747 50.000 3.88 0.00 0.00 1.78
397 398 0.659427 CGCTGACTTGGCCACATATG 59.341 55.000 3.88 0.00 0.00 1.78
406 407 3.717899 CCACATATGGGTGCGACG 58.282 61.111 7.80 0.00 43.04 5.12
407 408 2.534019 CCACATATGGGTGCGACGC 61.534 63.158 14.19 14.19 43.04 5.19
408 409 1.521457 CACATATGGGTGCGACGCT 60.521 57.895 22.08 2.17 31.67 5.07
409 410 1.521457 ACATATGGGTGCGACGCTG 60.521 57.895 22.08 11.28 31.67 5.18
410 411 2.108976 ATATGGGTGCGACGCTGG 59.891 61.111 22.08 0.00 31.67 4.85
411 412 4.830765 TATGGGTGCGACGCTGGC 62.831 66.667 22.08 10.89 31.67 4.85
424 425 3.833645 CTGGCCGTGTAGCGCCTA 61.834 66.667 2.29 0.00 39.71 3.93
425 426 3.151710 TGGCCGTGTAGCGCCTAT 61.152 61.111 2.29 0.00 39.71 2.57
426 427 2.355956 GGCCGTGTAGCGCCTATC 60.356 66.667 2.29 0.00 39.71 2.08
427 428 2.728817 GCCGTGTAGCGCCTATCT 59.271 61.111 2.29 0.00 39.71 1.98
428 429 1.661821 GCCGTGTAGCGCCTATCTG 60.662 63.158 2.29 0.00 39.71 2.90
429 430 1.007271 CCGTGTAGCGCCTATCTGG 60.007 63.158 2.29 0.00 39.71 3.86
430 431 1.007271 CGTGTAGCGCCTATCTGGG 60.007 63.158 2.29 0.00 36.00 4.45
431 432 1.452953 CGTGTAGCGCCTATCTGGGA 61.453 60.000 2.29 0.00 36.00 4.37
432 433 0.315568 GTGTAGCGCCTATCTGGGAG 59.684 60.000 2.29 0.00 36.00 4.30
433 434 0.827925 TGTAGCGCCTATCTGGGAGG 60.828 60.000 2.29 0.00 37.12 4.30
439 440 1.227674 CCTATCTGGGAGGCGTTGC 60.228 63.158 0.00 0.00 0.00 4.17
440 441 1.522092 CTATCTGGGAGGCGTTGCA 59.478 57.895 0.00 0.00 0.00 4.08
441 442 0.107456 CTATCTGGGAGGCGTTGCAT 59.893 55.000 0.00 0.00 0.00 3.96
442 443 1.344438 CTATCTGGGAGGCGTTGCATA 59.656 52.381 0.00 0.00 0.00 3.14
443 444 0.107456 ATCTGGGAGGCGTTGCATAG 59.893 55.000 0.00 0.00 0.00 2.23
444 445 0.975556 TCTGGGAGGCGTTGCATAGA 60.976 55.000 0.00 0.00 0.00 1.98
445 446 0.531532 CTGGGAGGCGTTGCATAGAG 60.532 60.000 0.00 0.00 0.00 2.43
446 447 1.227674 GGGAGGCGTTGCATAGAGG 60.228 63.158 0.00 0.00 0.00 3.69
447 448 1.227674 GGAGGCGTTGCATAGAGGG 60.228 63.158 0.00 0.00 0.00 4.30
448 449 1.522569 GAGGCGTTGCATAGAGGGT 59.477 57.895 0.00 0.00 0.00 4.34
449 450 0.811616 GAGGCGTTGCATAGAGGGTG 60.812 60.000 0.00 0.00 0.00 4.61
450 451 1.078426 GGCGTTGCATAGAGGGTGT 60.078 57.895 0.00 0.00 0.00 4.16
451 452 1.369091 GGCGTTGCATAGAGGGTGTG 61.369 60.000 0.00 0.00 0.00 3.82
452 453 1.369091 GCGTTGCATAGAGGGTGTGG 61.369 60.000 0.00 0.00 0.00 4.17
453 454 1.369091 CGTTGCATAGAGGGTGTGGC 61.369 60.000 0.00 0.00 0.00 5.01
454 455 1.078497 TTGCATAGAGGGTGTGGCG 60.078 57.895 0.00 0.00 0.00 5.69
455 456 2.897350 GCATAGAGGGTGTGGCGC 60.897 66.667 0.00 0.00 0.00 6.53
456 457 2.203070 CATAGAGGGTGTGGCGCC 60.203 66.667 22.73 22.73 0.00 6.53
457 458 3.849951 ATAGAGGGTGTGGCGCCG 61.850 66.667 23.90 0.00 34.37 6.46
478 479 4.627801 TGGCGGGCGCTACACAAA 62.628 61.111 7.64 0.00 41.60 2.83
479 480 3.358707 GGCGGGCGCTACACAAAA 61.359 61.111 7.64 0.00 41.60 2.44
480 481 2.175811 GCGGGCGCTACACAAAAG 59.824 61.111 7.64 0.00 38.26 2.27
481 482 2.867472 CGGGCGCTACACAAAAGG 59.133 61.111 7.64 0.00 0.00 3.11
482 483 2.686816 CGGGCGCTACACAAAAGGG 61.687 63.158 7.64 0.00 0.00 3.95
483 484 1.602605 GGGCGCTACACAAAAGGGT 60.603 57.895 7.64 0.00 0.00 4.34
484 485 1.583495 GGGCGCTACACAAAAGGGTC 61.583 60.000 7.64 0.00 0.00 4.46
485 486 0.887387 GGCGCTACACAAAAGGGTCA 60.887 55.000 7.64 0.00 32.25 4.02
486 487 0.517316 GCGCTACACAAAAGGGTCAG 59.483 55.000 0.00 0.00 0.00 3.51
487 488 1.156736 CGCTACACAAAAGGGTCAGG 58.843 55.000 0.00 0.00 0.00 3.86
488 489 1.534729 GCTACACAAAAGGGTCAGGG 58.465 55.000 0.00 0.00 0.00 4.45
489 490 1.886655 GCTACACAAAAGGGTCAGGGG 60.887 57.143 0.00 0.00 0.00 4.79
490 491 1.702957 CTACACAAAAGGGTCAGGGGA 59.297 52.381 0.00 0.00 0.00 4.81
491 492 0.478507 ACACAAAAGGGTCAGGGGAG 59.521 55.000 0.00 0.00 0.00 4.30
492 493 0.478507 CACAAAAGGGTCAGGGGAGT 59.521 55.000 0.00 0.00 0.00 3.85
493 494 0.478507 ACAAAAGGGTCAGGGGAGTG 59.521 55.000 0.00 0.00 0.00 3.51
494 495 0.771127 CAAAAGGGTCAGGGGAGTGA 59.229 55.000 0.00 0.00 0.00 3.41
495 496 1.144913 CAAAAGGGTCAGGGGAGTGAA 59.855 52.381 0.00 0.00 0.00 3.18
496 497 1.529744 AAAGGGTCAGGGGAGTGAAA 58.470 50.000 0.00 0.00 0.00 2.69
497 498 1.760405 AAGGGTCAGGGGAGTGAAAT 58.240 50.000 0.00 0.00 0.00 2.17
498 499 2.661176 AGGGTCAGGGGAGTGAAATA 57.339 50.000 0.00 0.00 0.00 1.40
499 500 2.482494 AGGGTCAGGGGAGTGAAATAG 58.518 52.381 0.00 0.00 0.00 1.73
500 501 2.197465 GGGTCAGGGGAGTGAAATAGT 58.803 52.381 0.00 0.00 0.00 2.12
501 502 2.576648 GGGTCAGGGGAGTGAAATAGTT 59.423 50.000 0.00 0.00 0.00 2.24
502 503 3.010250 GGGTCAGGGGAGTGAAATAGTTT 59.990 47.826 0.00 0.00 0.00 2.66
503 504 4.262617 GGTCAGGGGAGTGAAATAGTTTC 58.737 47.826 0.00 0.00 40.08 2.78
504 505 3.933332 GTCAGGGGAGTGAAATAGTTTCG 59.067 47.826 0.00 0.00 42.55 3.46
512 513 4.483476 GTGAAATAGTTTCGCAACCAGT 57.517 40.909 10.21 0.00 46.56 4.00
513 514 4.855531 GTGAAATAGTTTCGCAACCAGTT 58.144 39.130 10.21 0.00 46.56 3.16
514 515 4.909880 GTGAAATAGTTTCGCAACCAGTTC 59.090 41.667 10.21 0.41 46.56 3.01
515 516 4.576873 TGAAATAGTTTCGCAACCAGTTCA 59.423 37.500 5.34 5.34 42.55 3.18
516 517 5.240623 TGAAATAGTTTCGCAACCAGTTCAT 59.759 36.000 5.34 0.00 42.55 2.57
517 518 5.705609 AATAGTTTCGCAACCAGTTCATT 57.294 34.783 0.00 0.00 32.70 2.57
518 519 3.626028 AGTTTCGCAACCAGTTCATTC 57.374 42.857 0.00 0.00 32.70 2.67
519 520 3.214328 AGTTTCGCAACCAGTTCATTCT 58.786 40.909 0.00 0.00 32.70 2.40
520 521 3.003689 AGTTTCGCAACCAGTTCATTCTG 59.996 43.478 0.00 0.00 32.70 3.02
521 522 2.254546 TCGCAACCAGTTCATTCTGT 57.745 45.000 0.00 0.00 34.02 3.41
522 523 1.872952 TCGCAACCAGTTCATTCTGTG 59.127 47.619 0.00 0.00 34.02 3.66
523 524 1.872952 CGCAACCAGTTCATTCTGTGA 59.127 47.619 0.00 0.00 34.02 3.58
524 525 2.485426 CGCAACCAGTTCATTCTGTGAT 59.515 45.455 0.00 0.00 36.54 3.06
525 526 3.058016 CGCAACCAGTTCATTCTGTGATT 60.058 43.478 0.00 0.00 36.54 2.57
526 527 4.557296 CGCAACCAGTTCATTCTGTGATTT 60.557 41.667 0.00 0.00 36.54 2.17
527 528 4.682860 GCAACCAGTTCATTCTGTGATTTG 59.317 41.667 0.00 0.00 36.54 2.32
528 529 5.507817 GCAACCAGTTCATTCTGTGATTTGA 60.508 40.000 0.00 0.00 36.54 2.69
529 530 6.684686 CAACCAGTTCATTCTGTGATTTGAT 58.315 36.000 0.00 0.00 36.54 2.57
530 531 6.906157 ACCAGTTCATTCTGTGATTTGATT 57.094 33.333 0.00 0.00 36.54 2.57
531 532 7.294017 ACCAGTTCATTCTGTGATTTGATTT 57.706 32.000 0.00 0.00 36.54 2.17
532 533 7.373493 ACCAGTTCATTCTGTGATTTGATTTC 58.627 34.615 0.00 0.00 36.54 2.17
533 534 6.525628 CCAGTTCATTCTGTGATTTGATTTCG 59.474 38.462 0.00 0.00 36.54 3.46
534 535 7.300320 CAGTTCATTCTGTGATTTGATTTCGA 58.700 34.615 0.00 0.00 36.54 3.71
535 536 7.966753 CAGTTCATTCTGTGATTTGATTTCGAT 59.033 33.333 0.00 0.00 36.54 3.59
536 537 8.517878 AGTTCATTCTGTGATTTGATTTCGATT 58.482 29.630 0.00 0.00 36.54 3.34
537 538 9.773328 GTTCATTCTGTGATTTGATTTCGATTA 57.227 29.630 0.00 0.00 36.54 1.75
542 543 9.613428 TTCTGTGATTTGATTTCGATTATAGGT 57.387 29.630 0.00 0.00 0.00 3.08
543 544 9.261180 TCTGTGATTTGATTTCGATTATAGGTC 57.739 33.333 0.00 0.00 0.00 3.85
544 545 8.956533 TGTGATTTGATTTCGATTATAGGTCA 57.043 30.769 0.00 0.00 0.00 4.02
545 546 9.389755 TGTGATTTGATTTCGATTATAGGTCAA 57.610 29.630 0.00 0.00 0.00 3.18
844 845 3.855853 GGCCGCCTCCTCCTCTTC 61.856 72.222 0.71 0.00 0.00 2.87
1017 1018 3.122297 CGGCATGTCTCTTGATCTCTTC 58.878 50.000 0.00 0.00 0.00 2.87
1020 1021 4.370917 GCATGTCTCTTGATCTCTTCTCC 58.629 47.826 0.00 0.00 0.00 3.71
1023 1024 5.191727 TGTCTCTTGATCTCTTCTCCTCT 57.808 43.478 0.00 0.00 0.00 3.69
1092 1093 2.248431 GTCACGTTCGTTGCTGCC 59.752 61.111 0.00 0.00 0.00 4.85
1096 1097 4.012895 CGTTCGTTGCTGCCGCTT 62.013 61.111 0.70 0.00 36.97 4.68
1536 1537 3.280920 GGCACAGCCTTATCTCTCG 57.719 57.895 0.00 0.00 46.69 4.04
1731 1732 2.158957 GGCCAATTCTACTCATCACCGA 60.159 50.000 0.00 0.00 0.00 4.69
1773 1774 1.193874 CCACGAACTAAAGCGGTTCAC 59.806 52.381 0.00 0.00 41.99 3.18
1792 1793 2.947652 CACAGTAGCATTGGCATAAGCT 59.052 45.455 12.41 12.41 44.61 3.74
1794 1795 4.576053 CACAGTAGCATTGGCATAAGCTTA 59.424 41.667 8.99 8.99 44.61 3.09
1818 1819 0.543749 AGGTAAGGCTGATGCAGGAC 59.456 55.000 0.00 0.00 41.91 3.85
1838 1839 4.821805 GGACAGGATTGAAGACTTTGTGAA 59.178 41.667 0.00 0.00 0.00 3.18
1851 1852 5.641209 AGACTTTGTGAAGCATATGTCAGAC 59.359 40.000 4.29 0.00 36.29 3.51
1971 1972 1.906574 GAGTACTTGGTGACCCATGGA 59.093 52.381 15.22 0.00 41.49 3.41
2058 2059 5.079689 AGAGAGCTAAACTTGGCTACTTC 57.920 43.478 0.00 0.47 45.48 3.01
2066 2067 6.016192 GCTAAACTTGGCTACTTCCTTTTCTT 60.016 38.462 0.00 0.00 0.00 2.52
2069 2070 3.764237 TGGCTACTTCCTTTTCTTCGT 57.236 42.857 0.00 0.00 0.00 3.85
2136 2137 3.074412 ACTGTTTTCTGTTATCCCTGCG 58.926 45.455 0.00 0.00 0.00 5.18
2143 2144 1.480954 CTGTTATCCCTGCGTGTAGGT 59.519 52.381 3.27 0.00 36.02 3.08
2152 2153 2.038837 GCGTGTAGGTTTGGGAGGC 61.039 63.158 0.00 0.00 0.00 4.70
2207 2208 0.896940 CAAGCTGCCTCCAACCACAT 60.897 55.000 0.00 0.00 0.00 3.21
2407 2408 0.986019 ACCGGATACAGGGATTGGCA 60.986 55.000 9.46 0.00 35.02 4.92
2572 2704 6.757897 AATCCTTTCGTTTTATGATCTGCA 57.242 33.333 0.00 0.00 0.00 4.41
2820 2958 5.842907 AGGAATGGTTTGCTGAAAAGTAAC 58.157 37.500 0.00 0.00 31.54 2.50
3006 3144 4.416505 GAACAAGAAGAGGCATGTTCTG 57.583 45.455 11.82 8.51 45.05 3.02
3120 3258 1.870055 CTCCAAGCAATGCGGCAGTT 61.870 55.000 9.25 0.26 35.83 3.16
3624 3762 2.677875 CTGGAAGGTGGGCTTGGC 60.678 66.667 0.00 0.00 0.00 4.52
3810 3948 6.040616 CCGACTCTCCAGTTGTAAAGGTATAT 59.959 42.308 0.00 0.00 32.49 0.86
3847 3985 2.161855 GTGTCAGGTCAATTGCATGGA 58.838 47.619 12.34 0.00 0.00 3.41
3868 4006 5.014123 TGGAATGTCTATGTTTTCTGGGTCT 59.986 40.000 0.00 0.00 0.00 3.85
3943 4081 2.564947 AGTCATGGACTTCACTCAGGAC 59.435 50.000 0.00 0.00 40.28 3.85
4033 4172 8.523915 TGAATCATATGCTGTTTGGTCTTTAT 57.476 30.769 0.00 0.00 0.00 1.40
4039 4179 4.079253 TGCTGTTTGGTCTTTATCCCTTC 58.921 43.478 0.00 0.00 0.00 3.46
4077 4217 9.112725 GGTTCACTACCTTTTTAAGAGTGTAAA 57.887 33.333 0.00 0.00 44.10 2.01
4095 4235 6.262273 AGTGTAAATTTGGTCAACACTGTAGG 59.738 38.462 18.43 0.00 46.62 3.18
4134 4274 5.916661 ATAGCAAGTCTCGGAAAGTAGAA 57.083 39.130 0.00 0.00 0.00 2.10
4452 4603 5.492895 TGTGGTTGCCGAAGATAATTTAGA 58.507 37.500 0.00 0.00 0.00 2.10
4546 4697 4.822026 ACTCAACTTGGAGGATAAGAACG 58.178 43.478 0.00 0.00 39.27 3.95
4548 4699 5.479375 ACTCAACTTGGAGGATAAGAACGTA 59.521 40.000 0.00 0.00 39.27 3.57
4549 4700 6.154706 ACTCAACTTGGAGGATAAGAACGTAT 59.845 38.462 0.00 0.00 39.27 3.06
4551 4702 7.039882 TCAACTTGGAGGATAAGAACGTATTC 58.960 38.462 0.00 0.00 34.78 1.75
4554 4709 6.156429 ACTTGGAGGATAAGAACGTATTCCTT 59.844 38.462 0.00 0.00 35.18 3.36
4779 5064 8.665685 GGAACTTATATCCAACAGTAACAACAG 58.334 37.037 0.00 0.00 36.92 3.16
4842 5128 9.030301 GCATAAAACTGCAAAGAGTTTCTTTTA 57.970 29.630 2.65 0.00 44.23 1.52
4872 5158 9.469807 AAATGCAAATAGTTCAACGAAATGTTA 57.530 25.926 0.00 0.00 39.29 2.41
4935 5221 3.132111 GGGAGGAGTCAATGAGAGAGAAC 59.868 52.174 0.00 0.00 0.00 3.01
4964 5250 6.321945 CCTAAGAGTCCTTTAGGGAAGTACTC 59.678 46.154 9.42 4.04 46.24 2.59
4965 5251 4.612401 AGAGTCCTTTAGGGAAGTACTCC 58.388 47.826 0.00 0.00 46.76 3.85
4966 5252 6.809392 TAAGAGTCCTTTAGGGAAGTACTCCC 60.809 46.154 17.92 17.92 46.76 4.30
4973 5259 2.502633 GGAAGTACTCCCTCCGTCC 58.497 63.158 0.00 0.00 38.44 4.79
4974 5260 1.042003 GGAAGTACTCCCTCCGTCCC 61.042 65.000 0.00 0.00 38.44 4.46
4976 5262 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
4977 5263 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4978 5264 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4979 5265 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
4980 5266 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4981 5267 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4982 5268 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4983 5269 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4984 5270 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4985 5271 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4986 5272 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4987 5273 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4988 5274 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
4989 5275 4.069304 TCCGTCCCAAAATAAGTGTCTTG 58.931 43.478 0.00 0.00 0.00 3.02
4990 5276 4.069304 CCGTCCCAAAATAAGTGTCTTGA 58.931 43.478 0.00 0.00 0.00 3.02
4991 5277 4.083484 CCGTCCCAAAATAAGTGTCTTGAC 60.083 45.833 0.00 0.00 0.00 3.18
4992 5278 4.083484 CGTCCCAAAATAAGTGTCTTGACC 60.083 45.833 0.00 0.00 0.00 4.02
4993 5279 5.070685 GTCCCAAAATAAGTGTCTTGACCT 58.929 41.667 0.00 0.00 0.00 3.85
4994 5280 5.535030 GTCCCAAAATAAGTGTCTTGACCTT 59.465 40.000 0.00 4.52 0.00 3.50
5079 5385 4.299586 TGTATCCACATTTGAGGCAAGA 57.700 40.909 0.00 0.00 0.00 3.02
5175 5482 2.286294 CGTCTGGCTATCTTCAACATGC 59.714 50.000 0.00 0.00 0.00 4.06
5254 5561 6.656965 TGGATGGCCAATCATATATTACCT 57.343 37.500 10.96 0.00 42.49 3.08
5255 5562 6.662755 TGGATGGCCAATCATATATTACCTC 58.337 40.000 10.96 0.00 42.49 3.85
5256 5563 6.064717 GGATGGCCAATCATATATTACCTCC 58.935 44.000 10.96 2.40 36.98 4.30
5257 5564 6.353864 GGATGGCCAATCATATATTACCTCCA 60.354 42.308 10.96 0.00 36.98 3.86
5258 5565 6.656965 TGGCCAATCATATATTACCTCCAT 57.343 37.500 0.61 0.00 0.00 3.41
5259 5566 6.662755 TGGCCAATCATATATTACCTCCATC 58.337 40.000 0.61 0.00 0.00 3.51
5260 5567 6.064717 GGCCAATCATATATTACCTCCATCC 58.935 44.000 0.00 0.00 0.00 3.51
5261 5568 6.064717 GCCAATCATATATTACCTCCATCCC 58.935 44.000 0.00 0.00 0.00 3.85
5262 5569 6.353864 GCCAATCATATATTACCTCCATCCCA 60.354 42.308 0.00 0.00 0.00 4.37
5263 5570 7.641111 GCCAATCATATATTACCTCCATCCCAT 60.641 40.741 0.00 0.00 0.00 4.00
5264 5571 8.948362 CCAATCATATATTACCTCCATCCCATA 58.052 37.037 0.00 0.00 0.00 2.74
5266 5573 9.973880 AATCATATATTACCTCCATCCCATAGA 57.026 33.333 0.00 0.00 0.00 1.98
5268 5575 9.973880 TCATATATTACCTCCATCCCATAGATT 57.026 33.333 0.00 0.00 30.59 2.40
5271 5578 6.786843 ATTACCTCCATCCCATAGATTTGT 57.213 37.500 0.00 0.00 30.59 2.83
5272 5579 4.713792 ACCTCCATCCCATAGATTTGTC 57.286 45.455 0.00 0.00 30.59 3.18
5273 5580 4.310740 ACCTCCATCCCATAGATTTGTCT 58.689 43.478 0.00 0.00 30.59 3.41
5274 5581 5.476983 ACCTCCATCCCATAGATTTGTCTA 58.523 41.667 0.00 0.00 30.59 2.59
5275 5582 5.545723 ACCTCCATCCCATAGATTTGTCTAG 59.454 44.000 0.00 0.00 30.59 2.43
5276 5583 5.782331 CCTCCATCCCATAGATTTGTCTAGA 59.218 44.000 0.00 0.00 30.59 2.43
5277 5584 6.443206 CCTCCATCCCATAGATTTGTCTAGAT 59.557 42.308 0.00 0.00 30.59 1.98
5278 5585 7.621285 CCTCCATCCCATAGATTTGTCTAGATA 59.379 40.741 0.00 0.00 30.59 1.98
5279 5586 9.211410 CTCCATCCCATAGATTTGTCTAGATAT 57.789 37.037 0.00 0.00 30.59 1.63
5280 5587 8.985922 TCCATCCCATAGATTTGTCTAGATATG 58.014 37.037 0.00 0.00 30.59 1.78
5281 5588 8.209584 CCATCCCATAGATTTGTCTAGATATGG 58.790 40.741 16.25 16.25 39.46 2.74
5282 5589 8.985922 CATCCCATAGATTTGTCTAGATATGGA 58.014 37.037 21.71 12.44 41.34 3.41
5283 5590 9.741198 ATCCCATAGATTTGTCTAGATATGGAT 57.259 33.333 21.71 13.61 41.34 3.41
5284 5591 8.985922 TCCCATAGATTTGTCTAGATATGGATG 58.014 37.037 21.71 11.16 41.34 3.51
5285 5592 8.766476 CCCATAGATTTGTCTAGATATGGATGT 58.234 37.037 21.71 6.28 41.34 3.06
5322 5629 9.968870 ACATCCGTATCTAGAAAAATCTAAGAC 57.031 33.333 0.00 0.00 0.00 3.01
5323 5630 9.967346 CATCCGTATCTAGAAAAATCTAAGACA 57.033 33.333 0.00 0.00 0.00 3.41
5325 5632 9.404848 TCCGTATCTAGAAAAATCTAAGACAGA 57.595 33.333 0.00 0.00 37.79 3.41
5326 5633 9.672086 CCGTATCTAGAAAAATCTAAGACAGAG 57.328 37.037 0.00 0.00 36.48 3.35
5327 5634 9.672086 CGTATCTAGAAAAATCTAAGACAGAGG 57.328 37.037 0.00 0.00 36.48 3.69
5328 5635 9.974980 GTATCTAGAAAAATCTAAGACAGAGGG 57.025 37.037 0.00 0.00 36.48 4.30
5329 5636 8.846423 ATCTAGAAAAATCTAAGACAGAGGGA 57.154 34.615 0.00 0.00 36.48 4.20
5330 5637 8.299990 TCTAGAAAAATCTAAGACAGAGGGAG 57.700 38.462 0.00 0.00 36.48 4.30
5331 5638 6.943899 AGAAAAATCTAAGACAGAGGGAGT 57.056 37.500 0.00 0.00 36.48 3.85
5332 5639 9.191479 CTAGAAAAATCTAAGACAGAGGGAGTA 57.809 37.037 0.00 0.00 36.48 2.59
5333 5640 8.437274 AGAAAAATCTAAGACAGAGGGAGTAA 57.563 34.615 0.00 0.00 36.48 2.24
5334 5641 8.881262 AGAAAAATCTAAGACAGAGGGAGTAAA 58.119 33.333 0.00 0.00 36.48 2.01
5335 5642 9.503399 GAAAAATCTAAGACAGAGGGAGTAAAA 57.497 33.333 0.00 0.00 36.48 1.52
5336 5643 9.862149 AAAAATCTAAGACAGAGGGAGTAAAAA 57.138 29.630 0.00 0.00 36.48 1.94
5338 5645 9.674068 AAATCTAAGACAGAGGGAGTAAAAATC 57.326 33.333 0.00 0.00 36.48 2.17
5339 5646 8.616799 ATCTAAGACAGAGGGAGTAAAAATCT 57.383 34.615 0.00 0.00 36.48 2.40
5340 5647 9.716556 ATCTAAGACAGAGGGAGTAAAAATCTA 57.283 33.333 0.00 0.00 36.48 1.98
5341 5648 9.543231 TCTAAGACAGAGGGAGTAAAAATCTAA 57.457 33.333 0.00 0.00 0.00 2.10
5342 5649 9.810545 CTAAGACAGAGGGAGTAAAAATCTAAG 57.189 37.037 0.00 0.00 0.00 2.18
5343 5650 8.437274 AAGACAGAGGGAGTAAAAATCTAAGA 57.563 34.615 0.00 0.00 0.00 2.10
5344 5651 7.842982 AGACAGAGGGAGTAAAAATCTAAGAC 58.157 38.462 0.00 0.00 0.00 3.01
5345 5652 7.455008 AGACAGAGGGAGTAAAAATCTAAGACA 59.545 37.037 0.00 0.00 0.00 3.41
5346 5653 7.616313 ACAGAGGGAGTAAAAATCTAAGACAG 58.384 38.462 0.00 0.00 0.00 3.51
5347 5654 7.455008 ACAGAGGGAGTAAAAATCTAAGACAGA 59.545 37.037 0.00 0.00 37.79 3.41
5348 5655 7.978975 CAGAGGGAGTAAAAATCTAAGACAGAG 59.021 40.741 0.00 0.00 36.48 3.35
5349 5656 7.125053 AGAGGGAGTAAAAATCTAAGACAGAGG 59.875 40.741 0.00 0.00 36.48 3.69
5350 5657 6.157123 AGGGAGTAAAAATCTAAGACAGAGGG 59.843 42.308 0.00 0.00 36.48 4.30
5351 5658 6.156429 GGGAGTAAAAATCTAAGACAGAGGGA 59.844 42.308 0.00 0.00 36.48 4.20
5352 5659 7.269316 GGAGTAAAAATCTAAGACAGAGGGAG 58.731 42.308 0.00 0.00 36.48 4.30
5384 5691 2.593346 AGCCACGATCAATCTCTCAC 57.407 50.000 0.00 0.00 0.00 3.51
5417 5724 4.279922 GGGTACAAATACAAACAAGCTGGT 59.720 41.667 0.00 0.00 32.40 4.00
5482 5789 5.937975 ATCCAACAAAATAAGGTGGGATG 57.062 39.130 0.00 0.00 44.41 3.51
5488 5795 7.665145 CCAACAAAATAAGGTGGGATGAATTTT 59.335 33.333 0.00 0.00 28.85 1.82
5489 5796 9.065798 CAACAAAATAAGGTGGGATGAATTTTT 57.934 29.630 0.00 0.00 0.00 1.94
5491 5798 9.942850 ACAAAATAAGGTGGGATGAATTTTTAG 57.057 29.630 0.00 0.00 0.00 1.85
5523 5830 5.496556 TCACATTTAGATGGTGGTGGTAAG 58.503 41.667 0.00 0.00 37.60 2.34
5531 5838 3.586470 TGGTGGTGGTAAGTGTTCATT 57.414 42.857 0.00 0.00 0.00 2.57
5606 5926 7.661437 TCTTGCATCTATTTGTTGTGTCTACTT 59.339 33.333 0.00 0.00 0.00 2.24
5607 5927 7.132694 TGCATCTATTTGTTGTGTCTACTTG 57.867 36.000 0.00 0.00 0.00 3.16
5636 5956 4.433186 TTTGTGCATTCGATGTTTAGGG 57.567 40.909 0.00 0.00 0.00 3.53
5637 5957 1.742831 TGTGCATTCGATGTTTAGGGC 59.257 47.619 0.00 0.00 0.00 5.19
5638 5958 2.017049 GTGCATTCGATGTTTAGGGCT 58.983 47.619 0.00 0.00 0.00 5.19
5663 5983 3.696281 TTTGCCATGAATGCGTCTATG 57.304 42.857 0.00 0.00 0.00 2.23
5667 5987 1.941975 CCATGAATGCGTCTATGTGCA 59.058 47.619 0.00 0.00 46.51 4.57
5670 5990 2.270923 TGAATGCGTCTATGTGCACTC 58.729 47.619 19.41 3.39 45.07 3.51
5678 5998 4.499188 GCGTCTATGTGCACTCCTGTATTA 60.499 45.833 19.41 0.00 0.00 0.98
5679 5999 5.773575 CGTCTATGTGCACTCCTGTATTAT 58.226 41.667 19.41 1.95 0.00 1.28
5898 6218 7.772757 TCAATCTTGTGCATTGTGGTATATACA 59.227 33.333 14.70 0.00 33.61 2.29
5932 6252 7.592938 ACTTCTTTAATTGAACATCGCATCAA 58.407 30.769 0.00 0.00 39.66 2.57
5941 6261 8.959734 ATTGAACATCGCATCAATATTGTATG 57.040 30.769 14.97 16.17 42.77 2.39
5970 6290 3.459232 TGCATAGTCCTTCGATCCTTG 57.541 47.619 0.00 0.00 0.00 3.61
5973 6293 3.432326 GCATAGTCCTTCGATCCTTGGTT 60.432 47.826 0.00 0.00 0.00 3.67
6002 6322 8.863049 GTTTGCTTTAACACATCAGGATAATTG 58.137 33.333 0.00 0.00 0.00 2.32
6016 6336 7.114754 TCAGGATAATTGTTCAGCATTTCTCT 58.885 34.615 0.00 0.00 0.00 3.10
6185 6505 7.057264 AGTTAGAAGAATATTCAGGGCTTTCC 58.943 38.462 17.56 0.42 0.00 3.13
6700 7023 3.126514 CAGTTCACTGTCTTGATGGCATC 59.873 47.826 20.52 20.52 39.09 3.91
6758 7081 6.639671 GCGAAGAGCTAAAGGATGTATATG 57.360 41.667 0.00 0.00 44.04 1.78
6767 7090 4.672587 AAGGATGTATATGCAGTCGTGT 57.327 40.909 0.00 0.00 0.00 4.49
6800 7123 3.718956 AGGGCTGAGAAACTATAATGCCT 59.281 43.478 0.00 0.00 39.12 4.75
6802 7125 3.251972 GGCTGAGAAACTATAATGCCTGC 59.748 47.826 0.00 0.00 36.52 4.85
6837 7160 4.507710 TGTCTGGTATCAATCTGTGAAGC 58.492 43.478 0.00 0.00 40.50 3.86
6879 7202 8.461249 AAGATATGAAGAGAAATTGGTGGATG 57.539 34.615 0.00 0.00 0.00 3.51
6901 7224 0.107993 CATGGAAGAGCTTCGCCAGA 60.108 55.000 8.13 0.00 40.37 3.86
6908 7231 0.671781 GAGCTTCGCCAGATGTGTGT 60.672 55.000 0.00 0.00 0.00 3.72
6927 7250 9.896645 ATGTGTGTTTATCTTGAGATGACTTAT 57.103 29.630 3.79 0.00 36.05 1.73
6931 7254 8.535592 GTGTTTATCTTGAGATGACTTATCACG 58.464 37.037 3.79 0.00 37.79 4.35
6934 7257 4.424626 TCTTGAGATGACTTATCACGTGC 58.575 43.478 11.67 0.00 37.79 5.34
7180 7504 6.488062 GCATTTCATCTCGAAGTTAAATGC 57.512 37.500 21.74 21.74 46.60 3.56
7219 7543 2.937149 GGTGCGTTTCTCTTAATCCCTC 59.063 50.000 0.00 0.00 0.00 4.30
7296 7620 3.847671 TGGAGTGTGTTGTAACATCCA 57.152 42.857 12.28 12.28 41.59 3.41
7350 7674 2.163010 TGTCCTACTCCTTTTCGTAGCG 59.837 50.000 0.00 0.00 33.46 4.26
7409 7737 6.781943 AGACTACTCTTGTACTAGTGTTCCT 58.218 40.000 15.33 8.80 0.00 3.36
7458 7786 4.503007 TCGCTGTTTTCGCTATCTGATTAC 59.497 41.667 0.00 0.00 0.00 1.89
7477 7805 3.665745 ACTGAAATTGGCACCATTGAC 57.334 42.857 0.00 0.00 0.00 3.18
7526 7854 3.268013 ACGTTTTTCACACTGCTATGC 57.732 42.857 0.00 0.00 0.00 3.14
7534 7862 2.553602 TCACACTGCTATGCCACAAAAG 59.446 45.455 0.00 0.00 0.00 2.27
7624 7959 4.833478 ATATATTGCCTGGCCTCTACAG 57.167 45.455 17.53 0.00 35.74 2.74
7630 7965 0.683973 CCTGGCCTCTACAGCATAGG 59.316 60.000 3.32 0.00 34.65 2.57
7661 7997 5.539582 TGCCATGTTTATTACAACGTCTC 57.460 39.130 0.00 0.00 40.89 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.877612 ACATGTGTGAATACATAGACAAACAGA 59.122 33.333 0.00 0.00 39.17 3.41
1 2 8.032952 ACATGTGTGAATACATAGACAAACAG 57.967 34.615 0.00 0.00 39.17 3.16
2 3 7.977789 ACATGTGTGAATACATAGACAAACA 57.022 32.000 0.00 0.00 39.17 2.83
12 13 8.608317 CGGAAACATAATACATGTGTGAATACA 58.392 33.333 9.11 0.00 34.63 2.29
13 14 8.067784 CCGGAAACATAATACATGTGTGAATAC 58.932 37.037 9.11 0.00 31.80 1.89
14 15 7.771361 ACCGGAAACATAATACATGTGTGAATA 59.229 33.333 9.46 0.00 31.80 1.75
15 16 6.601613 ACCGGAAACATAATACATGTGTGAAT 59.398 34.615 9.46 0.00 31.80 2.57
16 17 5.941058 ACCGGAAACATAATACATGTGTGAA 59.059 36.000 9.46 0.00 31.80 3.18
17 18 5.492895 ACCGGAAACATAATACATGTGTGA 58.507 37.500 9.46 0.00 31.80 3.58
18 19 5.811399 ACCGGAAACATAATACATGTGTG 57.189 39.130 9.46 4.81 31.80 3.82
19 20 7.925043 TTAACCGGAAACATAATACATGTGT 57.075 32.000 9.46 0.00 31.80 3.72
20 21 9.872757 GTATTAACCGGAAACATAATACATGTG 57.127 33.333 9.46 0.00 39.40 3.21
21 22 9.616156 TGTATTAACCGGAAACATAATACATGT 57.384 29.630 22.31 2.69 42.13 3.21
29 30 9.048446 GCTAGAATTGTATTAACCGGAAACATA 57.952 33.333 9.46 0.00 0.00 2.29
30 31 7.554835 TGCTAGAATTGTATTAACCGGAAACAT 59.445 33.333 9.46 0.00 0.00 2.71
31 32 6.879993 TGCTAGAATTGTATTAACCGGAAACA 59.120 34.615 9.46 1.34 0.00 2.83
32 33 7.311364 TGCTAGAATTGTATTAACCGGAAAC 57.689 36.000 9.46 0.00 0.00 2.78
33 34 7.771361 TCATGCTAGAATTGTATTAACCGGAAA 59.229 33.333 9.46 1.61 0.00 3.13
34 35 7.276658 TCATGCTAGAATTGTATTAACCGGAA 58.723 34.615 9.46 0.00 0.00 4.30
35 36 6.822442 TCATGCTAGAATTGTATTAACCGGA 58.178 36.000 9.46 0.00 0.00 5.14
36 37 7.490962 TTCATGCTAGAATTGTATTAACCGG 57.509 36.000 0.00 0.00 0.00 5.28
110 111 5.478332 GGATGAAGGAAATATGCCCTAAAGG 59.522 44.000 0.00 0.00 39.47 3.11
111 112 5.478332 GGGATGAAGGAAATATGCCCTAAAG 59.522 44.000 0.00 0.00 31.36 1.85
112 113 5.393866 GGGATGAAGGAAATATGCCCTAAA 58.606 41.667 0.00 0.00 31.36 1.85
113 114 4.202673 GGGGATGAAGGAAATATGCCCTAA 60.203 45.833 5.86 0.00 45.81 2.69
114 115 3.333680 GGGGATGAAGGAAATATGCCCTA 59.666 47.826 5.86 0.00 45.81 3.53
115 116 2.110721 GGGGATGAAGGAAATATGCCCT 59.889 50.000 5.86 0.00 45.81 5.19
116 117 2.529632 GGGGATGAAGGAAATATGCCC 58.470 52.381 0.00 0.00 43.76 5.36
117 118 2.893489 GTGGGGATGAAGGAAATATGCC 59.107 50.000 0.00 0.00 0.00 4.40
118 119 2.893489 GGTGGGGATGAAGGAAATATGC 59.107 50.000 0.00 0.00 0.00 3.14
119 120 3.140895 AGGGTGGGGATGAAGGAAATATG 59.859 47.826 0.00 0.00 0.00 1.78
120 121 3.140895 CAGGGTGGGGATGAAGGAAATAT 59.859 47.826 0.00 0.00 0.00 1.28
121 122 2.513738 CAGGGTGGGGATGAAGGAAATA 59.486 50.000 0.00 0.00 0.00 1.40
122 123 1.288932 CAGGGTGGGGATGAAGGAAAT 59.711 52.381 0.00 0.00 0.00 2.17
123 124 0.704076 CAGGGTGGGGATGAAGGAAA 59.296 55.000 0.00 0.00 0.00 3.13
124 125 0.178846 TCAGGGTGGGGATGAAGGAA 60.179 55.000 0.00 0.00 0.00 3.36
125 126 0.046242 ATCAGGGTGGGGATGAAGGA 59.954 55.000 0.00 0.00 0.00 3.36
126 127 0.929244 AATCAGGGTGGGGATGAAGG 59.071 55.000 0.00 0.00 0.00 3.46
127 128 2.762327 CAAAATCAGGGTGGGGATGAAG 59.238 50.000 0.00 0.00 0.00 3.02
128 129 2.559478 CCAAAATCAGGGTGGGGATGAA 60.559 50.000 0.00 0.00 0.00 2.57
129 130 1.006998 CCAAAATCAGGGTGGGGATGA 59.993 52.381 0.00 0.00 0.00 2.92
130 131 1.006998 TCCAAAATCAGGGTGGGGATG 59.993 52.381 0.00 0.00 32.95 3.51
131 132 1.007118 GTCCAAAATCAGGGTGGGGAT 59.993 52.381 0.00 0.00 32.95 3.85
137 138 1.519408 CGTTCGTCCAAAATCAGGGT 58.481 50.000 0.00 0.00 0.00 4.34
168 169 4.112059 AATTTGTCAAATTTGCCTCCGGC 61.112 43.478 16.26 0.00 40.26 6.13
169 170 2.810439 TTTGTCAAATTTGCCTCCGG 57.190 45.000 13.54 0.00 0.00 5.14
190 191 9.389755 TGTGATTTGATTTCGATTATAGGTCAA 57.610 29.630 0.00 0.00 0.00 3.18
191 192 8.956533 TGTGATTTGATTTCGATTATAGGTCA 57.043 30.769 0.00 0.00 0.00 4.02
192 193 9.261180 TCTGTGATTTGATTTCGATTATAGGTC 57.739 33.333 0.00 0.00 0.00 3.85
193 194 9.613428 TTCTGTGATTTGATTTCGATTATAGGT 57.387 29.630 0.00 0.00 0.00 3.08
198 199 9.773328 GTTCATTCTGTGATTTGATTTCGATTA 57.227 29.630 0.00 0.00 36.54 1.75
199 200 8.517878 AGTTCATTCTGTGATTTGATTTCGATT 58.482 29.630 0.00 0.00 36.54 3.34
200 201 7.966753 CAGTTCATTCTGTGATTTGATTTCGAT 59.033 33.333 0.00 0.00 36.54 3.59
201 202 7.300320 CAGTTCATTCTGTGATTTGATTTCGA 58.700 34.615 0.00 0.00 36.54 3.71
202 203 6.525628 CCAGTTCATTCTGTGATTTGATTTCG 59.474 38.462 0.00 0.00 36.54 3.46
203 204 7.373493 ACCAGTTCATTCTGTGATTTGATTTC 58.627 34.615 0.00 0.00 36.54 2.17
204 205 7.294017 ACCAGTTCATTCTGTGATTTGATTT 57.706 32.000 0.00 0.00 36.54 2.17
205 206 6.906157 ACCAGTTCATTCTGTGATTTGATT 57.094 33.333 0.00 0.00 36.54 2.57
206 207 6.684686 CAACCAGTTCATTCTGTGATTTGAT 58.315 36.000 0.00 0.00 36.54 2.57
207 208 5.507817 GCAACCAGTTCATTCTGTGATTTGA 60.508 40.000 0.00 0.00 36.54 2.69
208 209 4.682860 GCAACCAGTTCATTCTGTGATTTG 59.317 41.667 0.00 0.00 36.54 2.32
209 210 4.557296 CGCAACCAGTTCATTCTGTGATTT 60.557 41.667 0.00 0.00 36.54 2.17
210 211 3.058016 CGCAACCAGTTCATTCTGTGATT 60.058 43.478 0.00 0.00 36.54 2.57
211 212 2.485426 CGCAACCAGTTCATTCTGTGAT 59.515 45.455 0.00 0.00 36.54 3.06
212 213 1.872952 CGCAACCAGTTCATTCTGTGA 59.127 47.619 0.00 0.00 34.02 3.58
213 214 1.872952 TCGCAACCAGTTCATTCTGTG 59.127 47.619 0.00 0.00 34.02 3.66
214 215 2.254546 TCGCAACCAGTTCATTCTGT 57.745 45.000 0.00 0.00 34.02 3.41
215 216 3.003689 AGTTTCGCAACCAGTTCATTCTG 59.996 43.478 0.00 0.00 32.70 3.02
216 217 3.214328 AGTTTCGCAACCAGTTCATTCT 58.786 40.909 0.00 0.00 32.70 2.40
217 218 3.626028 AGTTTCGCAACCAGTTCATTC 57.374 42.857 0.00 0.00 32.70 2.67
218 219 5.705609 AATAGTTTCGCAACCAGTTCATT 57.294 34.783 0.00 0.00 32.70 2.57
219 220 5.240623 TGAAATAGTTTCGCAACCAGTTCAT 59.759 36.000 5.34 0.00 42.55 2.57
220 221 4.576873 TGAAATAGTTTCGCAACCAGTTCA 59.423 37.500 5.34 5.34 42.55 3.18
221 222 4.909880 GTGAAATAGTTTCGCAACCAGTTC 59.090 41.667 10.21 0.41 46.56 3.01
222 223 4.855531 GTGAAATAGTTTCGCAACCAGTT 58.144 39.130 10.21 0.00 46.56 3.16
223 224 4.483476 GTGAAATAGTTTCGCAACCAGT 57.517 40.909 10.21 0.00 46.56 4.00
231 232 3.933332 GTCAGGGGAGTGAAATAGTTTCG 59.067 47.826 0.00 0.00 42.55 3.46
232 233 4.262617 GGTCAGGGGAGTGAAATAGTTTC 58.737 47.826 0.00 0.00 40.08 2.78
233 234 3.010250 GGGTCAGGGGAGTGAAATAGTTT 59.990 47.826 0.00 0.00 0.00 2.66
234 235 2.576648 GGGTCAGGGGAGTGAAATAGTT 59.423 50.000 0.00 0.00 0.00 2.24
235 236 2.197465 GGGTCAGGGGAGTGAAATAGT 58.803 52.381 0.00 0.00 0.00 2.12
236 237 2.482494 AGGGTCAGGGGAGTGAAATAG 58.518 52.381 0.00 0.00 0.00 1.73
237 238 2.661176 AGGGTCAGGGGAGTGAAATA 57.339 50.000 0.00 0.00 0.00 1.40
238 239 1.760405 AAGGGTCAGGGGAGTGAAAT 58.240 50.000 0.00 0.00 0.00 2.17
239 240 1.529744 AAAGGGTCAGGGGAGTGAAA 58.470 50.000 0.00 0.00 0.00 2.69
240 241 1.144913 CAAAAGGGTCAGGGGAGTGAA 59.855 52.381 0.00 0.00 0.00 3.18
241 242 0.771127 CAAAAGGGTCAGGGGAGTGA 59.229 55.000 0.00 0.00 0.00 3.41
242 243 0.478507 ACAAAAGGGTCAGGGGAGTG 59.521 55.000 0.00 0.00 0.00 3.51
243 244 0.478507 CACAAAAGGGTCAGGGGAGT 59.521 55.000 0.00 0.00 0.00 3.85
244 245 0.478507 ACACAAAAGGGTCAGGGGAG 59.521 55.000 0.00 0.00 0.00 4.30
245 246 1.702957 CTACACAAAAGGGTCAGGGGA 59.297 52.381 0.00 0.00 0.00 4.81
246 247 1.886655 GCTACACAAAAGGGTCAGGGG 60.887 57.143 0.00 0.00 0.00 4.79
247 248 1.534729 GCTACACAAAAGGGTCAGGG 58.465 55.000 0.00 0.00 0.00 4.45
248 249 1.156736 CGCTACACAAAAGGGTCAGG 58.843 55.000 0.00 0.00 0.00 3.86
249 250 0.517316 GCGCTACACAAAAGGGTCAG 59.483 55.000 0.00 0.00 0.00 3.51
250 251 0.887387 GGCGCTACACAAAAGGGTCA 60.887 55.000 7.64 0.00 32.25 4.02
251 252 1.583495 GGGCGCTACACAAAAGGGTC 61.583 60.000 7.64 0.00 0.00 4.46
252 253 1.602605 GGGCGCTACACAAAAGGGT 60.603 57.895 7.64 0.00 0.00 4.34
253 254 1.586154 CTGGGCGCTACACAAAAGGG 61.586 60.000 7.64 0.00 0.00 3.95
254 255 1.586154 CCTGGGCGCTACACAAAAGG 61.586 60.000 7.64 0.42 0.00 3.11
255 256 1.875963 CCTGGGCGCTACACAAAAG 59.124 57.895 7.64 0.00 0.00 2.27
256 257 2.265182 GCCTGGGCGCTACACAAAA 61.265 57.895 7.64 0.00 0.00 2.44
257 258 2.671619 GCCTGGGCGCTACACAAA 60.672 61.111 7.64 0.00 0.00 2.83
268 269 4.087892 ACTAGTGCAGCGCCTGGG 62.088 66.667 2.29 0.00 31.21 4.45
269 270 2.816958 CACTAGTGCAGCGCCTGG 60.817 66.667 10.54 0.00 31.21 4.45
279 280 0.602638 TTCTGGGCGTTGCACTAGTG 60.603 55.000 18.93 18.93 30.56 2.74
280 281 0.320771 CTTCTGGGCGTTGCACTAGT 60.321 55.000 0.00 0.00 30.56 2.57
281 282 1.639298 GCTTCTGGGCGTTGCACTAG 61.639 60.000 0.00 0.00 30.56 2.57
282 283 1.671054 GCTTCTGGGCGTTGCACTA 60.671 57.895 0.00 0.00 30.56 2.74
283 284 2.111999 TAGCTTCTGGGCGTTGCACT 62.112 55.000 0.00 0.00 37.29 4.40
284 285 1.639298 CTAGCTTCTGGGCGTTGCAC 61.639 60.000 0.00 0.00 37.29 4.57
285 286 1.375908 CTAGCTTCTGGGCGTTGCA 60.376 57.895 0.00 0.00 37.29 4.08
286 287 2.109126 CCTAGCTTCTGGGCGTTGC 61.109 63.158 0.00 0.00 37.29 4.17
287 288 4.208632 CCTAGCTTCTGGGCGTTG 57.791 61.111 0.00 0.00 37.29 4.10
300 301 4.409342 CACTAGTGCAGCGCCTAG 57.591 61.111 10.54 14.52 36.35 3.02
310 311 2.034879 CCTGGGCGTTGCACTAGTG 61.035 63.158 18.93 18.93 30.56 2.74
311 312 2.172483 CTCCTGGGCGTTGCACTAGT 62.172 60.000 0.00 0.00 30.56 2.57
312 313 1.448540 CTCCTGGGCGTTGCACTAG 60.449 63.158 0.00 0.00 30.56 2.57
313 314 2.662596 CTCCTGGGCGTTGCACTA 59.337 61.111 0.00 0.00 30.56 2.74
315 316 3.605749 TAGCTCCTGGGCGTTGCAC 62.606 63.158 0.00 0.00 37.29 4.57
316 317 3.315142 CTAGCTCCTGGGCGTTGCA 62.315 63.158 0.00 0.00 37.29 4.08
317 318 2.512515 CTAGCTCCTGGGCGTTGC 60.513 66.667 0.00 0.00 37.29 4.17
318 319 2.187946 CCTAGCTCCTGGGCGTTG 59.812 66.667 0.00 0.00 37.29 4.10
331 332 0.803768 CTACACAGTGCAGCGCCTAG 60.804 60.000 2.29 0.00 0.00 3.02
332 333 1.215382 CTACACAGTGCAGCGCCTA 59.785 57.895 2.29 0.00 0.00 3.93
333 334 2.047844 CTACACAGTGCAGCGCCT 60.048 61.111 2.29 0.00 0.00 5.52
334 335 2.357517 ACTACACAGTGCAGCGCC 60.358 61.111 2.29 0.00 32.25 6.53
335 336 2.856032 CACTACACAGTGCAGCGC 59.144 61.111 0.00 0.00 45.44 5.92
342 343 1.183030 TAGGCGCCACACTACACAGT 61.183 55.000 31.54 5.27 34.42 3.55
343 344 0.458543 CTAGGCGCCACACTACACAG 60.459 60.000 31.54 6.91 0.00 3.66
344 345 1.589630 CTAGGCGCCACACTACACA 59.410 57.895 31.54 0.33 0.00 3.72
345 346 1.810030 GCTAGGCGCCACACTACAC 60.810 63.158 31.54 4.76 0.00 2.90
346 347 1.945354 GAGCTAGGCGCCACACTACA 61.945 60.000 31.54 2.99 40.39 2.74
347 348 1.227002 GAGCTAGGCGCCACACTAC 60.227 63.158 31.54 11.53 40.39 2.73
348 349 1.379977 AGAGCTAGGCGCCACACTA 60.380 57.895 31.54 11.42 40.39 2.74
349 350 2.681778 AGAGCTAGGCGCCACACT 60.682 61.111 31.54 21.99 40.39 3.55
350 351 2.202810 GAGAGCTAGGCGCCACAC 60.203 66.667 31.54 17.11 40.39 3.82
351 352 2.679996 TGAGAGCTAGGCGCCACA 60.680 61.111 31.54 15.42 40.39 4.17
352 353 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
353 354 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
373 374 3.730761 GGCCAAGTCAGCGTGCAG 61.731 66.667 0.00 0.00 0.00 4.41
374 375 4.560743 TGGCCAAGTCAGCGTGCA 62.561 61.111 0.61 0.00 0.00 4.57
375 376 4.030452 GTGGCCAAGTCAGCGTGC 62.030 66.667 7.24 0.00 0.00 5.34
376 377 0.673333 TATGTGGCCAAGTCAGCGTG 60.673 55.000 7.24 0.00 0.00 5.34
377 378 0.253044 ATATGTGGCCAAGTCAGCGT 59.747 50.000 7.24 0.00 0.00 5.07
378 379 0.659427 CATATGTGGCCAAGTCAGCG 59.341 55.000 7.24 0.00 0.00 5.18
379 380 1.027357 CCATATGTGGCCAAGTCAGC 58.973 55.000 7.24 0.00 39.01 4.26
380 381 1.064463 ACCCATATGTGGCCAAGTCAG 60.064 52.381 7.24 0.00 44.62 3.51
381 382 0.998928 ACCCATATGTGGCCAAGTCA 59.001 50.000 7.24 0.57 44.62 3.41
382 383 1.392589 CACCCATATGTGGCCAAGTC 58.607 55.000 7.24 0.00 44.62 3.01
383 384 0.684153 GCACCCATATGTGGCCAAGT 60.684 55.000 7.24 0.54 44.62 3.16
384 385 1.727511 CGCACCCATATGTGGCCAAG 61.728 60.000 7.24 0.00 44.62 3.61
385 386 1.752310 CGCACCCATATGTGGCCAA 60.752 57.895 7.24 0.00 44.62 4.52
386 387 2.124362 CGCACCCATATGTGGCCA 60.124 61.111 0.00 0.00 44.62 5.36
387 388 2.186826 GTCGCACCCATATGTGGCC 61.187 63.158 2.26 0.00 44.62 5.36
388 389 2.534019 CGTCGCACCCATATGTGGC 61.534 63.158 2.26 1.44 44.62 5.01
389 390 2.534019 GCGTCGCACCCATATGTGG 61.534 63.158 13.44 0.51 45.61 4.17
390 391 1.521457 AGCGTCGCACCCATATGTG 60.521 57.895 21.09 0.00 39.29 3.21
391 392 1.521457 CAGCGTCGCACCCATATGT 60.521 57.895 21.09 0.00 0.00 2.29
392 393 2.246739 CCAGCGTCGCACCCATATG 61.247 63.158 21.09 6.70 0.00 1.78
393 394 2.108976 CCAGCGTCGCACCCATAT 59.891 61.111 21.09 0.00 0.00 1.78
394 395 4.830765 GCCAGCGTCGCACCCATA 62.831 66.667 21.09 0.00 0.00 2.74
411 412 1.007271 CCAGATAGGCGCTACACGG 60.007 63.158 7.64 0.00 43.93 4.94
413 414 0.315568 CTCCCAGATAGGCGCTACAC 59.684 60.000 7.64 0.00 35.39 2.90
414 415 0.827925 CCTCCCAGATAGGCGCTACA 60.828 60.000 7.64 0.00 35.39 2.74
415 416 1.968310 CCTCCCAGATAGGCGCTAC 59.032 63.158 7.64 0.00 35.39 3.58
416 417 4.521559 CCTCCCAGATAGGCGCTA 57.478 61.111 7.64 0.00 35.39 4.26
421 422 1.227674 GCAACGCCTCCCAGATAGG 60.228 63.158 0.00 0.00 37.17 2.57
422 423 0.107456 ATGCAACGCCTCCCAGATAG 59.893 55.000 0.00 0.00 0.00 2.08
423 424 1.344438 CTATGCAACGCCTCCCAGATA 59.656 52.381 0.00 0.00 0.00 1.98
424 425 0.107456 CTATGCAACGCCTCCCAGAT 59.893 55.000 0.00 0.00 0.00 2.90
425 426 0.975556 TCTATGCAACGCCTCCCAGA 60.976 55.000 0.00 0.00 0.00 3.86
426 427 0.531532 CTCTATGCAACGCCTCCCAG 60.532 60.000 0.00 0.00 0.00 4.45
427 428 1.522092 CTCTATGCAACGCCTCCCA 59.478 57.895 0.00 0.00 0.00 4.37
428 429 1.227674 CCTCTATGCAACGCCTCCC 60.228 63.158 0.00 0.00 0.00 4.30
429 430 1.227674 CCCTCTATGCAACGCCTCC 60.228 63.158 0.00 0.00 0.00 4.30
430 431 0.811616 CACCCTCTATGCAACGCCTC 60.812 60.000 0.00 0.00 0.00 4.70
431 432 1.221840 CACCCTCTATGCAACGCCT 59.778 57.895 0.00 0.00 0.00 5.52
432 433 1.078426 ACACCCTCTATGCAACGCC 60.078 57.895 0.00 0.00 0.00 5.68
433 434 1.369091 CCACACCCTCTATGCAACGC 61.369 60.000 0.00 0.00 0.00 4.84
434 435 1.369091 GCCACACCCTCTATGCAACG 61.369 60.000 0.00 0.00 0.00 4.10
435 436 1.369091 CGCCACACCCTCTATGCAAC 61.369 60.000 0.00 0.00 0.00 4.17
436 437 1.078497 CGCCACACCCTCTATGCAA 60.078 57.895 0.00 0.00 0.00 4.08
437 438 2.584064 CGCCACACCCTCTATGCA 59.416 61.111 0.00 0.00 0.00 3.96
438 439 2.897350 GCGCCACACCCTCTATGC 60.897 66.667 0.00 0.00 0.00 3.14
439 440 2.203070 GGCGCCACACCCTCTATG 60.203 66.667 24.80 0.00 0.00 2.23
440 441 3.849951 CGGCGCCACACCCTCTAT 61.850 66.667 28.98 0.00 0.00 1.98
461 462 4.627801 TTTGTGTAGCGCCCGCCA 62.628 61.111 2.29 0.00 43.17 5.69
462 463 3.322706 CTTTTGTGTAGCGCCCGCC 62.323 63.158 2.29 0.00 43.17 6.13
463 464 2.175811 CTTTTGTGTAGCGCCCGC 59.824 61.111 2.29 4.20 42.33 6.13
464 465 2.686816 CCCTTTTGTGTAGCGCCCG 61.687 63.158 2.29 0.00 0.00 6.13
465 466 1.583495 GACCCTTTTGTGTAGCGCCC 61.583 60.000 2.29 0.00 0.00 6.13
466 467 0.887387 TGACCCTTTTGTGTAGCGCC 60.887 55.000 2.29 0.00 0.00 6.53
467 468 0.517316 CTGACCCTTTTGTGTAGCGC 59.483 55.000 0.00 0.00 0.00 5.92
468 469 1.156736 CCTGACCCTTTTGTGTAGCG 58.843 55.000 0.00 0.00 0.00 4.26
469 470 1.534729 CCCTGACCCTTTTGTGTAGC 58.465 55.000 0.00 0.00 0.00 3.58
470 471 1.702957 TCCCCTGACCCTTTTGTGTAG 59.297 52.381 0.00 0.00 0.00 2.74
471 472 1.702957 CTCCCCTGACCCTTTTGTGTA 59.297 52.381 0.00 0.00 0.00 2.90
472 473 0.478507 CTCCCCTGACCCTTTTGTGT 59.521 55.000 0.00 0.00 0.00 3.72
473 474 0.478507 ACTCCCCTGACCCTTTTGTG 59.521 55.000 0.00 0.00 0.00 3.33
474 475 0.478507 CACTCCCCTGACCCTTTTGT 59.521 55.000 0.00 0.00 0.00 2.83
475 476 0.771127 TCACTCCCCTGACCCTTTTG 59.229 55.000 0.00 0.00 0.00 2.44
476 477 1.529744 TTCACTCCCCTGACCCTTTT 58.470 50.000 0.00 0.00 0.00 2.27
477 478 1.529744 TTTCACTCCCCTGACCCTTT 58.470 50.000 0.00 0.00 0.00 3.11
478 479 1.760405 ATTTCACTCCCCTGACCCTT 58.240 50.000 0.00 0.00 0.00 3.95
479 480 2.225908 ACTATTTCACTCCCCTGACCCT 60.226 50.000 0.00 0.00 0.00 4.34
480 481 2.197465 ACTATTTCACTCCCCTGACCC 58.803 52.381 0.00 0.00 0.00 4.46
481 482 4.262617 GAAACTATTTCACTCCCCTGACC 58.737 47.826 0.00 0.00 39.45 4.02
482 483 3.933332 CGAAACTATTTCACTCCCCTGAC 59.067 47.826 2.50 0.00 39.63 3.51
483 484 3.618997 GCGAAACTATTTCACTCCCCTGA 60.619 47.826 2.50 0.00 39.63 3.86
484 485 2.678336 GCGAAACTATTTCACTCCCCTG 59.322 50.000 2.50 0.00 39.63 4.45
485 486 2.304761 TGCGAAACTATTTCACTCCCCT 59.695 45.455 2.50 0.00 39.63 4.79
486 487 2.706890 TGCGAAACTATTTCACTCCCC 58.293 47.619 2.50 0.00 39.63 4.81
487 488 3.119955 GGTTGCGAAACTATTTCACTCCC 60.120 47.826 6.17 0.00 39.63 4.30
488 489 3.500680 TGGTTGCGAAACTATTTCACTCC 59.499 43.478 6.17 1.39 39.63 3.85
489 490 4.213482 ACTGGTTGCGAAACTATTTCACTC 59.787 41.667 6.17 0.00 39.63 3.51
490 491 4.134563 ACTGGTTGCGAAACTATTTCACT 58.865 39.130 6.17 0.00 39.63 3.41
491 492 4.483476 ACTGGTTGCGAAACTATTTCAC 57.517 40.909 6.17 0.00 39.63 3.18
492 493 4.576873 TGAACTGGTTGCGAAACTATTTCA 59.423 37.500 17.86 17.86 39.63 2.69
493 494 5.103290 TGAACTGGTTGCGAAACTATTTC 57.897 39.130 13.74 13.74 36.32 2.17
494 495 5.705609 ATGAACTGGTTGCGAAACTATTT 57.294 34.783 6.17 0.00 0.00 1.40
495 496 5.473504 AGAATGAACTGGTTGCGAAACTATT 59.526 36.000 6.17 0.00 0.00 1.73
496 497 5.003804 AGAATGAACTGGTTGCGAAACTAT 58.996 37.500 6.17 0.00 0.00 2.12
497 498 4.213270 CAGAATGAACTGGTTGCGAAACTA 59.787 41.667 6.17 0.00 39.69 2.24
498 499 3.003689 CAGAATGAACTGGTTGCGAAACT 59.996 43.478 6.17 0.00 39.69 2.66
499 500 3.243068 ACAGAATGAACTGGTTGCGAAAC 60.243 43.478 0.00 0.00 39.69 2.78
500 501 2.948979 ACAGAATGAACTGGTTGCGAAA 59.051 40.909 0.00 0.00 39.69 3.46
501 502 2.290367 CACAGAATGAACTGGTTGCGAA 59.710 45.455 0.00 0.00 39.69 4.70
502 503 1.872952 CACAGAATGAACTGGTTGCGA 59.127 47.619 0.00 0.00 39.69 5.10
503 504 1.872952 TCACAGAATGAACTGGTTGCG 59.127 47.619 0.00 0.00 39.69 4.85
504 505 4.510038 AATCACAGAATGAACTGGTTGC 57.490 40.909 0.00 0.00 41.93 4.17
505 506 6.075762 TCAAATCACAGAATGAACTGGTTG 57.924 37.500 0.00 0.00 41.93 3.77
506 507 6.906157 ATCAAATCACAGAATGAACTGGTT 57.094 33.333 0.00 0.00 41.93 3.67
507 508 6.906157 AATCAAATCACAGAATGAACTGGT 57.094 33.333 0.00 0.00 41.93 4.00
508 509 6.525628 CGAAATCAAATCACAGAATGAACTGG 59.474 38.462 0.00 0.00 41.93 4.00
509 510 7.300320 TCGAAATCAAATCACAGAATGAACTG 58.700 34.615 0.00 0.00 41.93 3.16
510 511 7.439157 TCGAAATCAAATCACAGAATGAACT 57.561 32.000 0.00 0.00 41.93 3.01
511 512 8.679288 AATCGAAATCAAATCACAGAATGAAC 57.321 30.769 0.00 0.00 41.93 3.18
516 517 9.613428 ACCTATAATCGAAATCAAATCACAGAA 57.387 29.630 0.00 0.00 0.00 3.02
517 518 9.261180 GACCTATAATCGAAATCAAATCACAGA 57.739 33.333 0.00 0.00 0.00 3.41
518 519 9.045223 TGACCTATAATCGAAATCAAATCACAG 57.955 33.333 0.00 0.00 0.00 3.66
519 520 8.956533 TGACCTATAATCGAAATCAAATCACA 57.043 30.769 0.00 0.00 0.00 3.58
535 536 9.213799 GGCAAATTTGACAATTTTGACCTATAA 57.786 29.630 27.56 0.00 40.09 0.98
536 537 7.821846 GGGCAAATTTGACAATTTTGACCTATA 59.178 33.333 33.72 2.51 40.09 1.31
537 538 6.654582 GGGCAAATTTGACAATTTTGACCTAT 59.345 34.615 33.72 5.55 40.09 2.57
538 539 5.994668 GGGCAAATTTGACAATTTTGACCTA 59.005 36.000 33.72 3.60 40.09 3.08
539 540 4.821260 GGGCAAATTTGACAATTTTGACCT 59.179 37.500 33.72 5.89 40.09 3.85
540 541 4.023279 GGGGCAAATTTGACAATTTTGACC 60.023 41.667 33.51 33.51 40.09 4.02
541 542 4.821260 AGGGGCAAATTTGACAATTTTGAC 59.179 37.500 27.56 25.82 40.09 3.18
542 543 4.820716 CAGGGGCAAATTTGACAATTTTGA 59.179 37.500 27.56 0.07 40.09 2.69
543 544 4.557097 GCAGGGGCAAATTTGACAATTTTG 60.557 41.667 25.05 22.48 40.09 2.44
544 545 3.569277 GCAGGGGCAAATTTGACAATTTT 59.431 39.130 25.05 3.05 40.09 1.82
545 546 3.148412 GCAGGGGCAAATTTGACAATTT 58.852 40.909 25.05 4.81 42.37 1.82
546 547 2.552809 GGCAGGGGCAAATTTGACAATT 60.553 45.455 25.05 7.31 43.71 2.32
547 548 1.003464 GGCAGGGGCAAATTTGACAAT 59.997 47.619 25.05 10.22 43.71 2.71
548 549 0.396060 GGCAGGGGCAAATTTGACAA 59.604 50.000 25.05 0.00 43.71 3.18
549 550 1.814772 CGGCAGGGGCAAATTTGACA 61.815 55.000 25.05 0.00 43.71 3.58
550 551 1.079888 CGGCAGGGGCAAATTTGAC 60.080 57.895 22.31 19.34 43.71 3.18
551 552 2.282039 CCGGCAGGGGCAAATTTGA 61.282 57.895 22.31 0.00 43.71 2.69
552 553 2.265424 CCGGCAGGGGCAAATTTG 59.735 61.111 14.03 14.03 43.71 2.32
553 554 2.119391 TCCGGCAGGGGCAAATTT 59.881 55.556 2.05 0.00 43.71 1.82
554 555 2.679996 GTCCGGCAGGGGCAAATT 60.680 61.111 2.05 0.00 41.38 1.82
555 556 4.759205 GGTCCGGCAGGGGCAAAT 62.759 66.667 2.05 0.00 44.60 2.32
832 833 1.000486 TGGGTCGAAGAGGAGGAGG 60.000 63.158 0.00 0.00 36.95 4.30
1017 1018 6.648725 CAGAAGAAAACAAGAACCTAGAGGAG 59.351 42.308 1.60 0.00 38.94 3.69
1020 1021 5.180304 GCCAGAAGAAAACAAGAACCTAGAG 59.820 44.000 0.00 0.00 0.00 2.43
1023 1024 3.813166 CGCCAGAAGAAAACAAGAACCTA 59.187 43.478 0.00 0.00 0.00 3.08
1536 1537 1.456331 CTTGGGCATGGGGATGGAC 60.456 63.158 0.00 0.00 0.00 4.02
1631 1632 4.180057 GTTCTGATAACTCAGCAGGACAG 58.820 47.826 0.00 0.00 46.71 3.51
1773 1774 5.756195 TTAAGCTTATGCCAATGCTACTG 57.244 39.130 7.08 0.00 40.80 2.74
1792 1793 4.917385 TGCATCAGCCTTACCTTCTTTAA 58.083 39.130 0.00 0.00 41.13 1.52
1794 1795 3.350833 CTGCATCAGCCTTACCTTCTTT 58.649 45.455 0.00 0.00 41.13 2.52
1818 1819 4.276678 TGCTTCACAAAGTCTTCAATCCTG 59.723 41.667 0.00 0.00 34.79 3.86
1838 1839 2.035193 CGCAGTAGGTCTGACATATGCT 59.965 50.000 22.05 9.63 46.27 3.79
1875 1876 1.272490 TCCTGTGTAAACTCCAGCTCG 59.728 52.381 0.00 0.00 0.00 5.03
2136 2137 1.282382 TAGGCCTCCCAAACCTACAC 58.718 55.000 9.68 0.00 34.92 2.90
2143 2144 1.431243 ACCAAATGTAGGCCTCCCAAA 59.569 47.619 9.68 0.00 0.00 3.28
2152 2153 9.177608 TCAATTCTGAATAGAACCAAATGTAGG 57.822 33.333 2.85 0.00 45.17 3.18
2207 2208 1.065410 ACCATGTCCCCAGGTGACAA 61.065 55.000 9.04 0.00 45.15 3.18
2407 2408 8.023021 TGAATACCTCATAAGTAAGTGCATCT 57.977 34.615 0.00 0.00 0.00 2.90
2605 2738 0.324552 CCCATTTCATGCCCACTCCA 60.325 55.000 0.00 0.00 0.00 3.86
2606 2739 1.044790 CCCCATTTCATGCCCACTCC 61.045 60.000 0.00 0.00 0.00 3.85
2607 2740 0.033208 TCCCCATTTCATGCCCACTC 60.033 55.000 0.00 0.00 0.00 3.51
2609 2742 1.274712 TTTCCCCATTTCATGCCCAC 58.725 50.000 0.00 0.00 0.00 4.61
2610 2743 1.627834 GTTTTCCCCATTTCATGCCCA 59.372 47.619 0.00 0.00 0.00 5.36
2658 2795 4.450976 GAACCCCAATTTTGCTGTTCTTT 58.549 39.130 12.26 0.00 35.80 2.52
2661 2798 2.766313 GGAACCCCAATTTTGCTGTTC 58.234 47.619 11.58 11.58 36.89 3.18
2662 2799 2.928801 GGAACCCCAATTTTGCTGTT 57.071 45.000 0.00 0.00 0.00 3.16
2820 2958 1.331756 GCTACCACATCAATGGAAGCG 59.668 52.381 0.00 0.00 43.02 4.68
3006 3144 3.493303 GGAGGCCCCTGGATGACC 61.493 72.222 0.00 0.00 0.00 4.02
3120 3258 5.830457 TGACAACCTTTCAACCATGTTATCA 59.170 36.000 0.00 0.00 0.00 2.15
3624 3762 5.595542 TGAAGCCCTTTCCATCATAGATTTG 59.404 40.000 0.00 0.00 34.77 2.32
3810 3948 6.042781 ACCTGACACCTGAAACAGAAAGTATA 59.957 38.462 0.00 0.00 32.44 1.47
3847 3985 5.707298 CACAGACCCAGAAAACATAGACATT 59.293 40.000 0.00 0.00 0.00 2.71
3921 4059 2.828520 TCCTGAGTGAAGTCCATGACTC 59.171 50.000 0.00 0.00 42.59 3.36
3943 4081 4.761739 TCTGAACTTTGCAATTAGACCCAG 59.238 41.667 0.00 6.44 0.00 4.45
4033 4172 1.274416 ACCAATGAGCTAGGGAAGGGA 60.274 52.381 0.00 0.00 0.00 4.20
4039 4179 3.798202 GTAGTGAACCAATGAGCTAGGG 58.202 50.000 0.00 0.00 0.00 3.53
4095 4235 8.839310 ACTTGCTATAATCATAAGATCCACAC 57.161 34.615 0.00 0.00 31.90 3.82
4099 4239 7.704472 CCGAGACTTGCTATAATCATAAGATCC 59.296 40.741 0.00 0.00 31.90 3.36
4106 4246 6.821388 ACTTTCCGAGACTTGCTATAATCAT 58.179 36.000 0.00 0.00 0.00 2.45
4107 4247 6.222038 ACTTTCCGAGACTTGCTATAATCA 57.778 37.500 0.00 0.00 0.00 2.57
4181 4332 9.880157 GGAAACTGTGGTGAAATATACTAAGTA 57.120 33.333 0.00 0.00 0.00 2.24
4182 4333 8.603304 AGGAAACTGTGGTGAAATATACTAAGT 58.397 33.333 0.00 0.00 41.13 2.24
4183 4334 9.449719 AAGGAAACTGTGGTGAAATATACTAAG 57.550 33.333 0.00 0.00 42.68 2.18
4243 4394 7.571080 TGCTAATGATGCATCTAAAATGTGA 57.429 32.000 26.32 4.16 35.31 3.58
4585 4745 6.093495 GGCCAAATTTCCTTAAAAATGTAGGC 59.907 38.462 0.00 11.25 38.53 3.93
4595 4755 3.702045 CGGGTATGGCCAAATTTCCTTAA 59.298 43.478 10.96 0.00 39.65 1.85
4730 5015 6.326583 TCCTTTATCCGATGATAGTGAAACCT 59.673 38.462 0.00 0.00 34.98 3.50
4779 5064 5.539048 AGTTATGTCAGTCAGTGGTTGTAC 58.461 41.667 0.00 0.00 0.00 2.90
4864 5150 9.507329 ACTATGTATCCATGTCCATAACATTTC 57.493 33.333 0.00 0.00 46.73 2.17
4872 5158 7.582242 GCCTTGATACTATGTATCCATGTCCAT 60.582 40.741 13.18 0.00 32.29 3.41
4962 5248 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4963 5249 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4964 5250 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4965 5251 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4966 5252 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
4968 5254 4.069304 TCAAGACACTTATTTTGGGACGG 58.931 43.478 0.00 0.00 0.00 4.79
4969 5255 4.083484 GGTCAAGACACTTATTTTGGGACG 60.083 45.833 2.29 0.00 0.00 4.79
4971 5257 5.319043 AGGTCAAGACACTTATTTTGGGA 57.681 39.130 2.29 0.00 0.00 4.37
4972 5258 6.715264 ACTAAGGTCAAGACACTTATTTTGGG 59.285 38.462 2.29 0.00 0.00 4.12
4973 5259 7.094762 GGACTAAGGTCAAGACACTTATTTTGG 60.095 40.741 2.29 0.05 43.77 3.28
4974 5260 7.444183 TGGACTAAGGTCAAGACACTTATTTTG 59.556 37.037 2.29 0.34 43.77 2.44
4976 5262 7.074653 TGGACTAAGGTCAAGACACTTATTT 57.925 36.000 2.29 0.00 43.77 1.40
4977 5263 6.270231 ACTGGACTAAGGTCAAGACACTTATT 59.730 38.462 7.45 2.76 44.24 1.40
4978 5264 5.780793 ACTGGACTAAGGTCAAGACACTTAT 59.219 40.000 7.45 0.20 44.24 1.73
4979 5265 5.145564 ACTGGACTAAGGTCAAGACACTTA 58.854 41.667 7.45 6.73 44.24 2.24
4980 5266 3.967987 ACTGGACTAAGGTCAAGACACTT 59.032 43.478 7.45 5.99 44.24 3.16
4981 5267 3.577919 ACTGGACTAAGGTCAAGACACT 58.422 45.455 7.45 0.00 44.24 3.55
4982 5268 4.058817 CAACTGGACTAAGGTCAAGACAC 58.941 47.826 7.45 0.00 44.24 3.67
4983 5269 3.709653 ACAACTGGACTAAGGTCAAGACA 59.290 43.478 7.45 0.00 44.24 3.41
4984 5270 4.338379 ACAACTGGACTAAGGTCAAGAC 57.662 45.455 7.45 0.00 44.24 3.01
4985 5271 7.093465 CCTTATACAACTGGACTAAGGTCAAGA 60.093 40.741 7.45 0.00 44.24 3.02
4986 5272 7.042335 CCTTATACAACTGGACTAAGGTCAAG 58.958 42.308 0.00 0.00 46.26 3.02
4987 5273 6.727231 TCCTTATACAACTGGACTAAGGTCAA 59.273 38.462 6.56 0.00 43.77 3.18
4988 5274 6.258354 TCCTTATACAACTGGACTAAGGTCA 58.742 40.000 6.56 0.00 43.77 4.02
4989 5275 6.786967 TCCTTATACAACTGGACTAAGGTC 57.213 41.667 6.56 0.00 39.51 3.85
4990 5276 7.456902 TCTTTCCTTATACAACTGGACTAAGGT 59.543 37.037 6.56 0.00 39.51 3.50
4991 5277 7.848128 TCTTTCCTTATACAACTGGACTAAGG 58.152 38.462 0.00 0.00 39.75 2.69
4992 5278 9.535878 GATCTTTCCTTATACAACTGGACTAAG 57.464 37.037 0.00 0.00 0.00 2.18
4993 5279 9.268282 AGATCTTTCCTTATACAACTGGACTAA 57.732 33.333 0.00 0.00 0.00 2.24
4994 5280 8.840200 AGATCTTTCCTTATACAACTGGACTA 57.160 34.615 0.00 0.00 0.00 2.59
5067 5373 6.409524 TGATTGTTCTTTCTTGCCTCAAAT 57.590 33.333 0.00 0.00 0.00 2.32
5079 5385 8.331740 TGGGAGAGATTAGATTGATTGTTCTTT 58.668 33.333 0.00 0.00 0.00 2.52
5175 5482 5.986135 CCTTGATTCAGAACGGGATAACTAG 59.014 44.000 0.00 0.00 0.00 2.57
5247 5554 7.739444 AGACAAATCTATGGGATGGAGGTAATA 59.261 37.037 0.00 0.00 34.45 0.98
5248 5555 6.564152 AGACAAATCTATGGGATGGAGGTAAT 59.436 38.462 0.00 0.00 34.45 1.89
5249 5556 5.911178 AGACAAATCTATGGGATGGAGGTAA 59.089 40.000 0.00 0.00 34.45 2.85
5250 5557 5.476983 AGACAAATCTATGGGATGGAGGTA 58.523 41.667 0.00 0.00 34.45 3.08
5251 5558 4.310740 AGACAAATCTATGGGATGGAGGT 58.689 43.478 0.00 0.00 34.45 3.85
5252 5559 4.989875 AGACAAATCTATGGGATGGAGG 57.010 45.455 0.00 0.00 34.45 4.30
5253 5560 6.924913 TCTAGACAAATCTATGGGATGGAG 57.075 41.667 0.00 0.00 36.81 3.86
5254 5561 8.985922 CATATCTAGACAAATCTATGGGATGGA 58.014 37.037 0.00 0.00 36.81 3.41
5255 5562 8.209584 CCATATCTAGACAAATCTATGGGATGG 58.790 40.741 15.70 0.00 35.16 3.51
5256 5563 8.985922 TCCATATCTAGACAAATCTATGGGATG 58.014 37.037 20.34 3.60 37.71 3.51
5257 5564 9.741198 ATCCATATCTAGACAAATCTATGGGAT 57.259 33.333 20.34 13.09 37.71 3.85
5258 5565 8.985922 CATCCATATCTAGACAAATCTATGGGA 58.014 37.037 20.34 11.92 37.71 4.37
5259 5566 8.766476 ACATCCATATCTAGACAAATCTATGGG 58.234 37.037 20.34 12.09 37.71 4.00
5296 5603 9.968870 GTCTTAGATTTTTCTAGATACGGATGT 57.031 33.333 0.00 0.00 0.00 3.06
5297 5604 9.967346 TGTCTTAGATTTTTCTAGATACGGATG 57.033 33.333 0.00 0.00 0.00 3.51
5299 5606 9.404848 TCTGTCTTAGATTTTTCTAGATACGGA 57.595 33.333 0.00 0.00 0.00 4.69
5300 5607 9.672086 CTCTGTCTTAGATTTTTCTAGATACGG 57.328 37.037 0.00 0.00 34.21 4.02
5301 5608 9.672086 CCTCTGTCTTAGATTTTTCTAGATACG 57.328 37.037 0.00 0.00 34.21 3.06
5302 5609 9.974980 CCCTCTGTCTTAGATTTTTCTAGATAC 57.025 37.037 0.00 0.00 34.21 2.24
5303 5610 9.937876 TCCCTCTGTCTTAGATTTTTCTAGATA 57.062 33.333 0.00 0.00 34.21 1.98
5304 5611 8.846423 TCCCTCTGTCTTAGATTTTTCTAGAT 57.154 34.615 0.00 0.00 34.21 1.98
5305 5612 7.896496 ACTCCCTCTGTCTTAGATTTTTCTAGA 59.104 37.037 0.00 0.00 34.21 2.43
5306 5613 8.073467 ACTCCCTCTGTCTTAGATTTTTCTAG 57.927 38.462 0.00 0.00 34.21 2.43
5307 5614 9.543231 TTACTCCCTCTGTCTTAGATTTTTCTA 57.457 33.333 0.00 0.00 34.21 2.10
5308 5615 6.943899 ACTCCCTCTGTCTTAGATTTTTCT 57.056 37.500 0.00 0.00 34.21 2.52
5309 5616 9.503399 TTTTACTCCCTCTGTCTTAGATTTTTC 57.497 33.333 0.00 0.00 34.21 2.29
5310 5617 9.862149 TTTTTACTCCCTCTGTCTTAGATTTTT 57.138 29.630 0.00 0.00 34.21 1.94
5312 5619 9.674068 GATTTTTACTCCCTCTGTCTTAGATTT 57.326 33.333 0.00 0.00 34.21 2.17
5313 5620 9.052365 AGATTTTTACTCCCTCTGTCTTAGATT 57.948 33.333 0.00 0.00 34.21 2.40
5314 5621 8.616799 AGATTTTTACTCCCTCTGTCTTAGAT 57.383 34.615 0.00 0.00 34.21 1.98
5315 5622 9.543231 TTAGATTTTTACTCCCTCTGTCTTAGA 57.457 33.333 0.00 0.00 0.00 2.10
5316 5623 9.810545 CTTAGATTTTTACTCCCTCTGTCTTAG 57.189 37.037 0.00 0.00 0.00 2.18
5317 5624 9.543231 TCTTAGATTTTTACTCCCTCTGTCTTA 57.457 33.333 0.00 0.00 0.00 2.10
5318 5625 8.315482 GTCTTAGATTTTTACTCCCTCTGTCTT 58.685 37.037 0.00 0.00 0.00 3.01
5319 5626 7.455008 TGTCTTAGATTTTTACTCCCTCTGTCT 59.545 37.037 0.00 0.00 0.00 3.41
5320 5627 7.612677 TGTCTTAGATTTTTACTCCCTCTGTC 58.387 38.462 0.00 0.00 0.00 3.51
5321 5628 7.455008 TCTGTCTTAGATTTTTACTCCCTCTGT 59.545 37.037 0.00 0.00 0.00 3.41
5322 5629 7.841956 TCTGTCTTAGATTTTTACTCCCTCTG 58.158 38.462 0.00 0.00 0.00 3.35
5323 5630 7.125053 CCTCTGTCTTAGATTTTTACTCCCTCT 59.875 40.741 0.00 0.00 34.21 3.69
5324 5631 7.269316 CCTCTGTCTTAGATTTTTACTCCCTC 58.731 42.308 0.00 0.00 34.21 4.30
5325 5632 6.157123 CCCTCTGTCTTAGATTTTTACTCCCT 59.843 42.308 0.00 0.00 34.21 4.20
5326 5633 6.156429 TCCCTCTGTCTTAGATTTTTACTCCC 59.844 42.308 0.00 0.00 34.21 4.30
5327 5634 7.093245 ACTCCCTCTGTCTTAGATTTTTACTCC 60.093 40.741 0.00 0.00 34.21 3.85
5328 5635 7.842982 ACTCCCTCTGTCTTAGATTTTTACTC 58.157 38.462 0.00 0.00 34.21 2.59
5329 5636 7.800300 ACTCCCTCTGTCTTAGATTTTTACT 57.200 36.000 0.00 0.00 34.21 2.24
5330 5637 9.752961 GATACTCCCTCTGTCTTAGATTTTTAC 57.247 37.037 0.00 0.00 34.21 2.01
5331 5638 9.716556 AGATACTCCCTCTGTCTTAGATTTTTA 57.283 33.333 0.00 0.00 34.21 1.52
5332 5639 8.616799 AGATACTCCCTCTGTCTTAGATTTTT 57.383 34.615 0.00 0.00 34.21 1.94
5333 5640 8.616799 AAGATACTCCCTCTGTCTTAGATTTT 57.383 34.615 0.00 0.00 34.21 1.82
5334 5641 9.890915 ATAAGATACTCCCTCTGTCTTAGATTT 57.109 33.333 0.00 0.00 35.56 2.17
5337 5644 9.967451 CATATAAGATACTCCCTCTGTCTTAGA 57.033 37.037 0.00 0.00 35.56 2.10
5338 5645 9.747898 ACATATAAGATACTCCCTCTGTCTTAG 57.252 37.037 0.00 0.00 35.56 2.18
5340 5647 9.747898 CTACATATAAGATACTCCCTCTGTCTT 57.252 37.037 0.00 0.00 33.96 3.01
5341 5648 7.832187 GCTACATATAAGATACTCCCTCTGTCT 59.168 40.741 0.00 0.00 0.00 3.41
5342 5649 7.067737 GGCTACATATAAGATACTCCCTCTGTC 59.932 44.444 0.00 0.00 0.00 3.51
5343 5650 6.893005 GGCTACATATAAGATACTCCCTCTGT 59.107 42.308 0.00 0.00 0.00 3.41
5344 5651 6.892456 TGGCTACATATAAGATACTCCCTCTG 59.108 42.308 0.00 0.00 0.00 3.35
5345 5652 6.893005 GTGGCTACATATAAGATACTCCCTCT 59.107 42.308 0.00 0.00 0.00 3.69
5346 5653 6.183360 CGTGGCTACATATAAGATACTCCCTC 60.183 46.154 0.00 0.00 0.00 4.30
5347 5654 5.652891 CGTGGCTACATATAAGATACTCCCT 59.347 44.000 0.00 0.00 0.00 4.20
5348 5655 5.651139 TCGTGGCTACATATAAGATACTCCC 59.349 44.000 0.00 0.00 0.00 4.30
5349 5656 6.754702 TCGTGGCTACATATAAGATACTCC 57.245 41.667 0.00 0.00 0.00 3.85
5350 5657 7.986562 TGATCGTGGCTACATATAAGATACTC 58.013 38.462 0.00 0.00 0.00 2.59
5351 5658 7.939784 TGATCGTGGCTACATATAAGATACT 57.060 36.000 0.00 0.00 0.00 2.12
5352 5659 9.239002 GATTGATCGTGGCTACATATAAGATAC 57.761 37.037 0.00 0.00 0.00 2.24
5396 5703 8.943002 AGTATACCAGCTTGTTTGTATTTGTAC 58.057 33.333 0.00 0.00 0.00 2.90
5490 5797 9.730705 CCACCATCTAAATGTGATGTATAATCT 57.269 33.333 0.00 0.00 39.54 2.40
5491 5798 9.507329 ACCACCATCTAAATGTGATGTATAATC 57.493 33.333 0.00 0.00 39.54 1.75
5492 5799 9.288576 CACCACCATCTAAATGTGATGTATAAT 57.711 33.333 0.00 0.00 39.54 1.28
5515 5822 4.578928 ACACTCAAATGAACACTTACCACC 59.421 41.667 0.00 0.00 0.00 4.61
5523 5830 5.914635 CCACATGTAACACTCAAATGAACAC 59.085 40.000 0.00 0.00 0.00 3.32
5606 5926 5.752472 ACATCGAATGCACAAATTTCAAACA 59.248 32.000 0.00 0.00 0.00 2.83
5607 5927 6.214205 ACATCGAATGCACAAATTTCAAAC 57.786 33.333 0.00 0.00 0.00 2.93
5657 5977 8.361139 AGTAATAATACAGGAGTGCACATAGAC 58.639 37.037 21.04 3.89 34.29 2.59
5663 5983 6.106673 ACACAGTAATAATACAGGAGTGCAC 58.893 40.000 9.40 9.40 34.29 4.57
5667 5987 9.871238 CAACTTACACAGTAATAATACAGGAGT 57.129 33.333 0.00 0.00 32.94 3.85
5670 5990 9.095065 GTCCAACTTACACAGTAATAATACAGG 57.905 37.037 0.00 0.00 32.94 4.00
5678 5998 6.827727 ACTTGAGTCCAACTTACACAGTAAT 58.172 36.000 0.00 0.00 32.94 1.89
5679 5999 6.229936 ACTTGAGTCCAACTTACACAGTAA 57.770 37.500 0.00 0.00 32.94 2.24
5907 6227 7.144722 TGATGCGATGTTCAATTAAAGAAGT 57.855 32.000 0.00 0.00 0.00 3.01
5912 6232 9.800433 ACAATATTGATGCGATGTTCAATTAAA 57.200 25.926 22.16 0.00 41.52 1.52
5924 6244 8.382030 ACAAAGATCATACAATATTGATGCGA 57.618 30.769 22.16 12.07 32.84 5.10
5941 6261 4.870426 TCGAAGGACTATGCAACAAAGATC 59.130 41.667 0.00 0.00 0.00 2.75
5956 6276 3.146847 ACAAAACCAAGGATCGAAGGAC 58.853 45.455 0.00 0.00 0.00 3.85
5970 6290 6.238076 CCTGATGTGTTAAAGCAAACAAAACC 60.238 38.462 1.46 0.00 40.85 3.27
5973 6293 6.214191 TCCTGATGTGTTAAAGCAAACAAA 57.786 33.333 1.46 0.00 40.85 2.83
6002 6322 4.276926 ACCAGTGAAAGAGAAATGCTGAAC 59.723 41.667 0.00 0.00 0.00 3.18
6082 6402 2.286872 GAGACACTCCTGCAATCATGG 58.713 52.381 0.00 0.00 0.00 3.66
6174 6494 2.856988 AACCCCGGAAAGCCCTGA 60.857 61.111 0.73 0.00 0.00 3.86
6393 6716 3.973425 AGCCAGCAGAAGGATAAACATT 58.027 40.909 0.00 0.00 0.00 2.71
6777 7100 4.907875 AGGCATTATAGTTTCTCAGCCCTA 59.092 41.667 0.00 0.00 41.69 3.53
6779 7102 3.817647 CAGGCATTATAGTTTCTCAGCCC 59.182 47.826 0.00 0.00 41.69 5.19
6800 7123 3.226429 GACAGGCACGTCTGAGGCA 62.226 63.158 10.93 0.00 38.11 4.75
6802 7125 3.371021 AGACAGGCACGTCTGAGG 58.629 61.111 10.93 0.00 44.59 3.86
6837 7160 7.254137 TCATATCTTCTCGAGTTCTTTGTCTG 58.746 38.462 13.13 1.43 0.00 3.51
6901 7224 9.896645 ATAAGTCATCTCAAGATAAACACACAT 57.103 29.630 0.00 0.00 32.63 3.21
6908 7231 7.222805 GCACGTGATAAGTCATCTCAAGATAAA 59.777 37.037 22.23 0.00 36.60 1.40
6927 7250 4.617520 ACCACATGGCGCACGTGA 62.618 61.111 22.23 0.00 39.46 4.35
6931 7254 4.759096 GCGAACCACATGGCGCAC 62.759 66.667 10.83 0.00 43.19 5.34
6934 7257 3.803082 CTGGCGAACCACATGGCG 61.803 66.667 0.00 0.00 42.67 5.69
7180 7504 3.190535 GCACCTGTAACTTGGTATTGTGG 59.809 47.826 0.00 0.00 34.79 4.17
7236 7560 4.273148 AGAAAGAGACGCACCTGTTATT 57.727 40.909 0.00 0.00 0.00 1.40
7237 7561 3.963428 AGAAAGAGACGCACCTGTTAT 57.037 42.857 0.00 0.00 0.00 1.89
7238 7562 3.746045 AAGAAAGAGACGCACCTGTTA 57.254 42.857 0.00 0.00 0.00 2.41
7458 7786 2.598589 CGTCAATGGTGCCAATTTCAG 58.401 47.619 0.00 0.00 0.00 3.02
7477 7805 3.239941 GCATAGTAGACACGTGTTAAGCG 59.760 47.826 24.26 9.57 0.00 4.68
7526 7854 8.655651 TTGGTTTTAGATTTAAGCTTTTGTGG 57.344 30.769 3.20 0.00 0.00 4.17
7630 7965 0.109365 TAAACATGGCATGTGCGCAC 60.109 50.000 31.99 33.11 44.07 5.34
7634 7969 4.265085 CGTTGTAATAAACATGGCATGTGC 59.735 41.667 31.99 17.73 44.07 4.57



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.