Multiple sequence alignment - TraesCS6D01G251900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G251900 | chr6D | 100.000 | 7669 | 0 | 0 | 1 | 7669 | 355877673 | 355870005 | 0.000000e+00 | 14163.0 |
1 | TraesCS6D01G251900 | chr6D | 92.913 | 381 | 22 | 4 | 192 | 569 | 421064150 | 421063772 | 4.050000e-152 | 549.0 |
2 | TraesCS6D01G251900 | chr6D | 90.331 | 393 | 34 | 3 | 175 | 564 | 100482229 | 100481838 | 5.310000e-141 | 512.0 |
3 | TraesCS6D01G251900 | chr6D | 98.582 | 141 | 1 | 1 | 1 | 140 | 219229051 | 219229191 | 1.650000e-61 | 248.0 |
4 | TraesCS6D01G251900 | chr6D | 85.492 | 193 | 24 | 2 | 5021 | 5209 | 237817228 | 237817036 | 1.690000e-46 | 198.0 |
5 | TraesCS6D01G251900 | chr6D | 93.878 | 49 | 3 | 0 | 4953 | 5001 | 34019228 | 34019180 | 2.970000e-09 | 75.0 |
6 | TraesCS6D01G251900 | chr6D | 100.000 | 38 | 0 | 0 | 4961 | 4998 | 430446605 | 430446642 | 3.840000e-08 | 71.3 |
7 | TraesCS6D01G251900 | chr6D | 92.000 | 50 | 4 | 0 | 4952 | 5001 | 466538237 | 466538188 | 3.840000e-08 | 71.3 |
8 | TraesCS6D01G251900 | chr6D | 97.500 | 40 | 1 | 0 | 4959 | 4998 | 57898594 | 57898633 | 1.380000e-07 | 69.4 |
9 | TraesCS6D01G251900 | chr6D | 97.436 | 39 | 1 | 0 | 4960 | 4998 | 88882935 | 88882973 | 4.970000e-07 | 67.6 |
10 | TraesCS6D01G251900 | chr6D | 97.297 | 37 | 0 | 1 | 5292 | 5328 | 8498068 | 8498033 | 2.310000e-05 | 62.1 |
11 | TraesCS6D01G251900 | chr6D | 97.297 | 37 | 0 | 1 | 5292 | 5328 | 8836301 | 8836336 | 2.310000e-05 | 62.1 |
12 | TraesCS6D01G251900 | chr6D | 100.000 | 33 | 0 | 0 | 5292 | 5324 | 26936942 | 26936974 | 2.310000e-05 | 62.1 |
13 | TraesCS6D01G251900 | chr6D | 100.000 | 33 | 0 | 0 | 5292 | 5324 | 321495989 | 321495957 | 2.310000e-05 | 62.1 |
14 | TraesCS6D01G251900 | chr6D | 100.000 | 33 | 0 | 0 | 5292 | 5324 | 358766795 | 358766827 | 2.310000e-05 | 62.1 |
15 | TraesCS6D01G251900 | chr6D | 100.000 | 31 | 0 | 0 | 5294 | 5324 | 7795502 | 7795532 | 2.990000e-04 | 58.4 |
16 | TraesCS6D01G251900 | chr6D | 100.000 | 31 | 0 | 0 | 5294 | 5324 | 119666806 | 119666776 | 2.990000e-04 | 58.4 |
17 | TraesCS6D01G251900 | chr6D | 100.000 | 31 | 0 | 0 | 5294 | 5324 | 324166665 | 324166635 | 2.990000e-04 | 58.4 |
18 | TraesCS6D01G251900 | chr6D | 100.000 | 31 | 0 | 0 | 5294 | 5324 | 348606156 | 348606126 | 2.990000e-04 | 58.4 |
19 | TraesCS6D01G251900 | chr6D | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 7795457 | 7795484 | 1.400000e-02 | 52.8 |
20 | TraesCS6D01G251900 | chr6D | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 115044566 | 115044593 | 1.400000e-02 | 52.8 |
21 | TraesCS6D01G251900 | chr6D | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 269191141 | 269191168 | 1.400000e-02 | 52.8 |
22 | TraesCS6D01G251900 | chr6D | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 272859326 | 272859299 | 1.400000e-02 | 52.8 |
23 | TraesCS6D01G251900 | chr6D | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 309582925 | 309582898 | 1.400000e-02 | 52.8 |
24 | TraesCS6D01G251900 | chr6D | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 327006507 | 327006534 | 1.400000e-02 | 52.8 |
25 | TraesCS6D01G251900 | chr6D | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 335426943 | 335426916 | 1.400000e-02 | 52.8 |
26 | TraesCS6D01G251900 | chr6A | 96.251 | 4161 | 111 | 20 | 562 | 4718 | 498594009 | 498589890 | 0.000000e+00 | 6778.0 |
27 | TraesCS6D01G251900 | chr6A | 93.019 | 1991 | 106 | 15 | 5696 | 7669 | 498588939 | 498586965 | 0.000000e+00 | 2876.0 |
28 | TraesCS6D01G251900 | chr6A | 89.852 | 542 | 30 | 11 | 4709 | 5250 | 498589773 | 498589257 | 0.000000e+00 | 673.0 |
29 | TraesCS6D01G251900 | chr6A | 88.822 | 331 | 17 | 6 | 5354 | 5671 | 498589259 | 498588936 | 9.330000e-104 | 388.0 |
30 | TraesCS6D01G251900 | chr6A | 97.619 | 42 | 1 | 0 | 4957 | 4998 | 399220822 | 399220863 | 1.070000e-08 | 73.1 |
31 | TraesCS6D01G251900 | chr6A | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 28142718 | 28142745 | 1.400000e-02 | 52.8 |
32 | TraesCS6D01G251900 | chr6B | 92.509 | 2336 | 113 | 28 | 5354 | 7664 | 536843649 | 536841351 | 0.000000e+00 | 3288.0 |
33 | TraesCS6D01G251900 | chr6B | 97.520 | 1895 | 40 | 2 | 562 | 2456 | 536848380 | 536846493 | 0.000000e+00 | 3232.0 |
34 | TraesCS6D01G251900 | chr6B | 93.907 | 1953 | 67 | 27 | 2481 | 4420 | 536846337 | 536844424 | 0.000000e+00 | 2900.0 |
35 | TraesCS6D01G251900 | chr6B | 85.199 | 777 | 86 | 16 | 4493 | 5250 | 536844413 | 536843647 | 0.000000e+00 | 771.0 |
36 | TraesCS6D01G251900 | chr6B | 88.235 | 187 | 21 | 1 | 5021 | 5206 | 374970251 | 374970437 | 1.000000e-53 | 222.0 |
37 | TraesCS6D01G251900 | chr6B | 96.721 | 61 | 1 | 1 | 5264 | 5324 | 335976187 | 335976128 | 4.900000e-17 | 100.0 |
38 | TraesCS6D01G251900 | chr6B | 93.443 | 61 | 2 | 1 | 5264 | 5324 | 493033380 | 493033322 | 1.060000e-13 | 89.8 |
39 | TraesCS6D01G251900 | chr6B | 90.769 | 65 | 2 | 2 | 5264 | 5324 | 210130651 | 210130715 | 4.930000e-12 | 84.2 |
40 | TraesCS6D01G251900 | chr6B | 90.476 | 63 | 2 | 2 | 5264 | 5322 | 544455731 | 544455793 | 6.380000e-11 | 80.5 |
41 | TraesCS6D01G251900 | chr6B | 100.000 | 41 | 0 | 0 | 4958 | 4998 | 166127580 | 166127620 | 8.250000e-10 | 76.8 |
42 | TraesCS6D01G251900 | chr6B | 97.619 | 42 | 1 | 0 | 133 | 174 | 536848412 | 536848371 | 1.070000e-08 | 73.1 |
43 | TraesCS6D01G251900 | chr6B | 91.837 | 49 | 4 | 0 | 4961 | 5009 | 710231642 | 710231594 | 1.380000e-07 | 69.4 |
44 | TraesCS6D01G251900 | chr1D | 93.781 | 402 | 18 | 6 | 167 | 562 | 55033265 | 55033665 | 1.420000e-166 | 597.0 |
45 | TraesCS6D01G251900 | chr1D | 86.301 | 73 | 2 | 1 | 5261 | 5325 | 446276687 | 446276759 | 1.070000e-08 | 73.1 |
46 | TraesCS6D01G251900 | chr1D | 95.349 | 43 | 2 | 0 | 4959 | 5001 | 298620954 | 298620912 | 1.380000e-07 | 69.4 |
47 | TraesCS6D01G251900 | chr1D | 87.500 | 56 | 4 | 3 | 4958 | 5010 | 46636429 | 46636484 | 2.310000e-05 | 62.1 |
48 | TraesCS6D01G251900 | chr1D | 100.000 | 33 | 0 | 0 | 5292 | 5324 | 264639951 | 264639919 | 2.310000e-05 | 62.1 |
49 | TraesCS6D01G251900 | chr1D | 100.000 | 33 | 0 | 0 | 5292 | 5324 | 283320109 | 283320077 | 2.310000e-05 | 62.1 |
50 | TraesCS6D01G251900 | chr1D | 100.000 | 33 | 0 | 0 | 5292 | 5324 | 327548766 | 327548798 | 2.310000e-05 | 62.1 |
51 | TraesCS6D01G251900 | chr1D | 96.875 | 32 | 1 | 0 | 5261 | 5292 | 113906680 | 113906711 | 4.000000e-03 | 54.7 |
52 | TraesCS6D01G251900 | chr5D | 93.909 | 394 | 20 | 3 | 173 | 563 | 417034908 | 417035300 | 6.630000e-165 | 592.0 |
53 | TraesCS6D01G251900 | chr5D | 100.000 | 40 | 0 | 0 | 4959 | 4998 | 262513716 | 262513755 | 2.970000e-09 | 75.0 |
54 | TraesCS6D01G251900 | chr5D | 95.455 | 44 | 2 | 0 | 4961 | 5004 | 231600497 | 231600540 | 3.840000e-08 | 71.3 |
55 | TraesCS6D01G251900 | chr2D | 93.862 | 391 | 20 | 3 | 175 | 562 | 338338891 | 338338502 | 3.080000e-163 | 586.0 |
56 | TraesCS6D01G251900 | chr2D | 91.560 | 391 | 28 | 4 | 175 | 562 | 541464691 | 541465079 | 1.130000e-147 | 534.0 |
57 | TraesCS6D01G251900 | chr2D | 90.909 | 396 | 31 | 4 | 175 | 566 | 352214391 | 352213997 | 1.900000e-145 | 527.0 |
58 | TraesCS6D01G251900 | chr2D | 99.275 | 138 | 1 | 0 | 1 | 138 | 536263067 | 536262930 | 4.590000e-62 | 250.0 |
59 | TraesCS6D01G251900 | chr2D | 97.887 | 142 | 3 | 0 | 1 | 142 | 375990699 | 375990840 | 5.940000e-61 | 246.0 |
60 | TraesCS6D01G251900 | chr2D | 93.651 | 63 | 2 | 2 | 5264 | 5324 | 196832199 | 196832261 | 8.190000e-15 | 93.5 |
61 | TraesCS6D01G251900 | chr4D | 91.858 | 393 | 26 | 5 | 174 | 562 | 94599654 | 94600044 | 1.880000e-150 | 544.0 |
62 | TraesCS6D01G251900 | chr4D | 90.281 | 391 | 34 | 3 | 175 | 562 | 308755630 | 308756019 | 6.870000e-140 | 508.0 |
63 | TraesCS6D01G251900 | chr4D | 93.333 | 45 | 3 | 0 | 4957 | 5001 | 94883432 | 94883388 | 4.970000e-07 | 67.6 |
64 | TraesCS6D01G251900 | chrUn | 98.582 | 141 | 0 | 2 | 1 | 139 | 291740523 | 291740383 | 1.650000e-61 | 248.0 |
65 | TraesCS6D01G251900 | chrUn | 95.238 | 42 | 2 | 0 | 4960 | 5001 | 8484440 | 8484399 | 4.970000e-07 | 67.6 |
66 | TraesCS6D01G251900 | chrUn | 97.368 | 38 | 1 | 0 | 4961 | 4998 | 12894000 | 12894037 | 1.790000e-06 | 65.8 |
67 | TraesCS6D01G251900 | chrUn | 93.333 | 45 | 2 | 1 | 4954 | 4998 | 37406962 | 37406919 | 1.790000e-06 | 65.8 |
68 | TraesCS6D01G251900 | chrUn | 93.182 | 44 | 3 | 0 | 4958 | 5001 | 50416667 | 50416624 | 1.790000e-06 | 65.8 |
69 | TraesCS6D01G251900 | chrUn | 95.122 | 41 | 2 | 0 | 4961 | 5001 | 67413436 | 67413396 | 1.790000e-06 | 65.8 |
70 | TraesCS6D01G251900 | chrUn | 97.368 | 38 | 1 | 0 | 4961 | 4998 | 108971453 | 108971490 | 1.790000e-06 | 65.8 |
71 | TraesCS6D01G251900 | chrUn | 97.368 | 38 | 1 | 0 | 4961 | 4998 | 267452865 | 267452902 | 1.790000e-06 | 65.8 |
72 | TraesCS6D01G251900 | chrUn | 97.368 | 38 | 1 | 0 | 4961 | 4998 | 340256233 | 340256270 | 1.790000e-06 | 65.8 |
73 | TraesCS6D01G251900 | chrUn | 95.122 | 41 | 2 | 0 | 4961 | 5001 | 347805190 | 347805150 | 1.790000e-06 | 65.8 |
74 | TraesCS6D01G251900 | chrUn | 96.970 | 33 | 1 | 0 | 5292 | 5324 | 59655803 | 59655771 | 1.000000e-03 | 56.5 |
75 | TraesCS6D01G251900 | chrUn | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 24221083 | 24221110 | 1.400000e-02 | 52.8 |
76 | TraesCS6D01G251900 | chrUn | 100.000 | 28 | 0 | 0 | 5264 | 5291 | 476757010 | 476757037 | 1.400000e-02 | 52.8 |
77 | TraesCS6D01G251900 | chr7D | 98.571 | 140 | 2 | 0 | 1 | 140 | 195291235 | 195291096 | 1.650000e-61 | 248.0 |
78 | TraesCS6D01G251900 | chr7D | 93.865 | 163 | 7 | 2 | 1 | 160 | 562346987 | 562347149 | 7.690000e-60 | 243.0 |
79 | TraesCS6D01G251900 | chr7D | 100.000 | 30 | 0 | 0 | 5262 | 5291 | 534359249 | 534359278 | 1.000000e-03 | 56.5 |
80 | TraesCS6D01G251900 | chr7D | 96.774 | 31 | 1 | 0 | 5261 | 5291 | 447693559 | 447693589 | 1.400000e-02 | 52.8 |
81 | TraesCS6D01G251900 | chr3D | 96.078 | 153 | 3 | 3 | 1 | 151 | 141173925 | 141174076 | 5.940000e-61 | 246.0 |
82 | TraesCS6D01G251900 | chr3D | 96.000 | 150 | 4 | 1 | 1 | 148 | 228794520 | 228794371 | 7.690000e-60 | 243.0 |
83 | TraesCS6D01G251900 | chr3D | 86.885 | 61 | 0 | 6 | 5264 | 5324 | 22461308 | 22461360 | 2.310000e-05 | 62.1 |
84 | TraesCS6D01G251900 | chr5A | 92.216 | 167 | 5 | 5 | 1 | 160 | 159605767 | 159605932 | 5.990000e-56 | 230.0 |
85 | TraesCS6D01G251900 | chr2A | 85.340 | 191 | 24 | 4 | 5021 | 5209 | 285617405 | 285617217 | 2.180000e-45 | 195.0 |
86 | TraesCS6D01G251900 | chr2A | 92.188 | 64 | 2 | 1 | 5264 | 5324 | 712286620 | 712286683 | 3.810000e-13 | 87.9 |
87 | TraesCS6D01G251900 | chr3B | 81.313 | 198 | 16 | 6 | 5021 | 5217 | 417495465 | 417495642 | 2.890000e-29 | 141.0 |
88 | TraesCS6D01G251900 | chr3B | 90.566 | 53 | 3 | 2 | 4961 | 5011 | 607809449 | 607809397 | 1.380000e-07 | 69.4 |
89 | TraesCS6D01G251900 | chr7B | 95.082 | 61 | 1 | 2 | 5264 | 5324 | 476990561 | 476990503 | 2.280000e-15 | 95.3 |
90 | TraesCS6D01G251900 | chr7B | 88.889 | 63 | 3 | 2 | 5264 | 5322 | 510883918 | 510883856 | 2.970000e-09 | 75.0 |
91 | TraesCS6D01G251900 | chr7B | 90.385 | 52 | 3 | 2 | 4950 | 5001 | 228837967 | 228837918 | 4.970000e-07 | 67.6 |
92 | TraesCS6D01G251900 | chr7A | 93.443 | 61 | 2 | 2 | 5264 | 5324 | 70937335 | 70937277 | 1.060000e-13 | 89.8 |
93 | TraesCS6D01G251900 | chr5B | 93.443 | 61 | 2 | 2 | 5264 | 5324 | 680503395 | 680503453 | 1.060000e-13 | 89.8 |
94 | TraesCS6D01G251900 | chr5B | 97.561 | 41 | 1 | 0 | 4958 | 4998 | 502503906 | 502503946 | 3.840000e-08 | 71.3 |
95 | TraesCS6D01G251900 | chr5B | 95.455 | 44 | 2 | 0 | 4958 | 5001 | 591529291 | 591529248 | 3.840000e-08 | 71.3 |
96 | TraesCS6D01G251900 | chr5B | 90.000 | 50 | 4 | 1 | 4949 | 4998 | 352488608 | 352488656 | 6.420000e-06 | 63.9 |
97 | TraesCS6D01G251900 | chr5B | 100.000 | 29 | 0 | 0 | 5264 | 5292 | 327750266 | 327750294 | 4.000000e-03 | 54.7 |
98 | TraesCS6D01G251900 | chr1B | 90.769 | 65 | 2 | 2 | 5264 | 5324 | 451312032 | 451312096 | 4.930000e-12 | 84.2 |
99 | TraesCS6D01G251900 | chr1B | 89.286 | 56 | 4 | 2 | 4954 | 5007 | 428191384 | 428191329 | 1.380000e-07 | 69.4 |
100 | TraesCS6D01G251900 | chr1B | 85.507 | 69 | 2 | 4 | 5264 | 5324 | 525502051 | 525502119 | 1.790000e-06 | 65.8 |
101 | TraesCS6D01G251900 | chr4B | 95.455 | 44 | 2 | 0 | 4958 | 5001 | 1770217 | 1770174 | 3.840000e-08 | 71.3 |
102 | TraesCS6D01G251900 | chr4B | 91.837 | 49 | 4 | 0 | 4961 | 5009 | 124018918 | 124018870 | 1.380000e-07 | 69.4 |
103 | TraesCS6D01G251900 | chr4B | 86.765 | 68 | 2 | 1 | 5264 | 5324 | 128024787 | 128024720 | 1.380000e-07 | 69.4 |
104 | TraesCS6D01G251900 | chr4B | 93.333 | 45 | 3 | 0 | 4957 | 5001 | 158699502 | 158699458 | 4.970000e-07 | 67.6 |
105 | TraesCS6D01G251900 | chr2B | 90.741 | 54 | 3 | 2 | 4945 | 4998 | 584129388 | 584129439 | 3.840000e-08 | 71.3 |
106 | TraesCS6D01G251900 | chr1A | 88.525 | 61 | 4 | 1 | 5264 | 5324 | 427324709 | 427324766 | 3.840000e-08 | 71.3 |
107 | TraesCS6D01G251900 | chr1A | 96.875 | 32 | 1 | 0 | 5264 | 5295 | 589815014 | 589814983 | 4.000000e-03 | 54.7 |
108 | TraesCS6D01G251900 | chr1A | 96.875 | 32 | 0 | 1 | 5264 | 5294 | 84310273 | 84310242 | 1.400000e-02 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G251900 | chr6D | 355870005 | 355877673 | 7668 | True | 14163.00 | 14163 | 100.0000 | 1 | 7669 | 1 | chr6D.!!$R12 | 7668 |
1 | TraesCS6D01G251900 | chr6A | 498586965 | 498594009 | 7044 | True | 2678.75 | 6778 | 91.9860 | 562 | 7669 | 4 | chr6A.!!$R1 | 7107 |
2 | TraesCS6D01G251900 | chr6B | 536841351 | 536848412 | 7061 | True | 2052.82 | 3288 | 93.3508 | 133 | 7664 | 5 | chr6B.!!$R4 | 7531 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
441 | 442 | 0.107456 | CTATCTGGGAGGCGTTGCAT | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 | F |
443 | 444 | 0.107456 | ATCTGGGAGGCGTTGCATAG | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 2.23 | F |
491 | 492 | 0.478507 | ACACAAAAGGGTCAGGGGAG | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 | F |
1818 | 1819 | 0.543749 | AGGTAAGGCTGATGCAGGAC | 59.456 | 55.000 | 0.00 | 0.00 | 41.91 | 3.85 | F |
2207 | 2208 | 0.896940 | CAAGCTGCCTCCAACCACAT | 60.897 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 | F |
2407 | 2408 | 0.986019 | ACCGGATACAGGGATTGGCA | 60.986 | 55.000 | 9.46 | 0.00 | 35.02 | 4.92 | F |
3120 | 3258 | 1.870055 | CTCCAAGCAATGCGGCAGTT | 61.870 | 55.000 | 9.25 | 0.26 | 35.83 | 3.16 | F |
3847 | 3985 | 2.161855 | GTGTCAGGTCAATTGCATGGA | 58.838 | 47.619 | 12.34 | 0.00 | 0.00 | 3.41 | F |
3943 | 4081 | 2.564947 | AGTCATGGACTTCACTCAGGAC | 59.435 | 50.000 | 0.00 | 0.00 | 40.28 | 3.85 | F |
4935 | 5221 | 3.132111 | GGGAGGAGTCAATGAGAGAGAAC | 59.868 | 52.174 | 0.00 | 0.00 | 0.00 | 3.01 | F |
4976 | 5262 | 0.115745 | AAGTACTCCCTCCGTCCCAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 | F |
4978 | 5264 | 0.978907 | GTACTCCCTCCGTCCCAAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2207 | 2208 | 1.065410 | ACCATGTCCCCAGGTGACAA | 61.065 | 55.000 | 9.04 | 0.0 | 45.15 | 3.18 | R |
2407 | 2408 | 8.023021 | TGAATACCTCATAAGTAAGTGCATCT | 57.977 | 34.615 | 0.00 | 0.0 | 0.00 | 2.90 | R |
2607 | 2740 | 0.033208 | TCCCCATTTCATGCCCACTC | 60.033 | 55.000 | 0.00 | 0.0 | 0.00 | 3.51 | R |
2820 | 2958 | 1.331756 | GCTACCACATCAATGGAAGCG | 59.668 | 52.381 | 0.00 | 0.0 | 43.02 | 4.68 | R |
4033 | 4172 | 1.274416 | ACCAATGAGCTAGGGAAGGGA | 60.274 | 52.381 | 0.00 | 0.0 | 0.00 | 4.20 | R |
4039 | 4179 | 3.798202 | GTAGTGAACCAATGAGCTAGGG | 58.202 | 50.000 | 0.00 | 0.0 | 0.00 | 3.53 | R |
4963 | 5249 | 2.026636 | CACTTATTTTGGGACGGAGGGA | 60.027 | 50.000 | 0.00 | 0.0 | 0.00 | 4.20 | R |
4964 | 5250 | 2.290705 | ACACTTATTTTGGGACGGAGGG | 60.291 | 50.000 | 0.00 | 0.0 | 0.00 | 4.30 | R |
4965 | 5251 | 3.007635 | GACACTTATTTTGGGACGGAGG | 58.992 | 50.000 | 0.00 | 0.0 | 0.00 | 4.30 | R |
6082 | 6402 | 2.286872 | GAGACACTCCTGCAATCATGG | 58.713 | 52.381 | 0.00 | 0.0 | 0.00 | 3.66 | R |
6174 | 6494 | 2.856988 | AACCCCGGAAAGCCCTGA | 60.857 | 61.111 | 0.73 | 0.0 | 0.00 | 3.86 | R |
6800 | 7123 | 3.226429 | GACAGGCACGTCTGAGGCA | 62.226 | 63.158 | 10.93 | 0.0 | 38.11 | 4.75 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
25 | 26 | 8.255394 | TCTGTTTGTCTATGTATTCACACATG | 57.745 | 34.615 | 0.00 | 0.00 | 39.46 | 3.21 |
26 | 27 | 7.877612 | TCTGTTTGTCTATGTATTCACACATGT | 59.122 | 33.333 | 0.00 | 0.00 | 39.46 | 3.21 |
27 | 28 | 9.150348 | CTGTTTGTCTATGTATTCACACATGTA | 57.850 | 33.333 | 0.00 | 0.00 | 39.46 | 2.29 |
28 | 29 | 9.665719 | TGTTTGTCTATGTATTCACACATGTAT | 57.334 | 29.630 | 0.00 | 0.00 | 39.46 | 2.29 |
38 | 39 | 8.608317 | TGTATTCACACATGTATTATGTTTCCG | 58.392 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
39 | 40 | 6.429791 | TTCACACATGTATTATGTTTCCGG | 57.570 | 37.500 | 0.00 | 0.00 | 0.00 | 5.14 |
40 | 41 | 5.492895 | TCACACATGTATTATGTTTCCGGT | 58.507 | 37.500 | 0.00 | 0.00 | 0.00 | 5.28 |
41 | 42 | 5.941058 | TCACACATGTATTATGTTTCCGGTT | 59.059 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
42 | 43 | 7.104290 | TCACACATGTATTATGTTTCCGGTTA | 58.896 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
43 | 44 | 7.606839 | TCACACATGTATTATGTTTCCGGTTAA | 59.393 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
44 | 45 | 8.402472 | CACACATGTATTATGTTTCCGGTTAAT | 58.598 | 33.333 | 0.00 | 1.95 | 0.00 | 1.40 |
45 | 46 | 9.616156 | ACACATGTATTATGTTTCCGGTTAATA | 57.384 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
46 | 47 | 9.872757 | CACATGTATTATGTTTCCGGTTAATAC | 57.127 | 33.333 | 0.00 | 12.47 | 37.73 | 1.89 |
47 | 48 | 9.616156 | ACATGTATTATGTTTCCGGTTAATACA | 57.384 | 29.630 | 22.83 | 22.83 | 44.85 | 2.29 |
55 | 56 | 7.311364 | TGTTTCCGGTTAATACAATTCTAGC | 57.689 | 36.000 | 0.00 | 0.00 | 0.00 | 3.42 |
56 | 57 | 6.879993 | TGTTTCCGGTTAATACAATTCTAGCA | 59.120 | 34.615 | 0.00 | 0.00 | 0.00 | 3.49 |
57 | 58 | 7.554835 | TGTTTCCGGTTAATACAATTCTAGCAT | 59.445 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
58 | 59 | 7.490962 | TTCCGGTTAATACAATTCTAGCATG | 57.509 | 36.000 | 0.00 | 0.00 | 0.00 | 4.06 |
59 | 60 | 6.822442 | TCCGGTTAATACAATTCTAGCATGA | 58.178 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
60 | 61 | 7.276658 | TCCGGTTAATACAATTCTAGCATGAA | 58.723 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
61 | 62 | 7.936847 | TCCGGTTAATACAATTCTAGCATGAAT | 59.063 | 33.333 | 0.00 | 0.00 | 38.19 | 2.57 |
62 | 63 | 9.214957 | CCGGTTAATACAATTCTAGCATGAATA | 57.785 | 33.333 | 0.00 | 0.00 | 35.82 | 1.75 |
137 | 138 | 2.158325 | GGGCATATTTCCTTCATCCCCA | 60.158 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
164 | 165 | 1.153353 | TTTGGACGAACGGAATCAGC | 58.847 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
165 | 166 | 0.672401 | TTGGACGAACGGAATCAGCC | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
166 | 167 | 1.814169 | GGACGAACGGAATCAGCCC | 60.814 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
167 | 168 | 1.218316 | GACGAACGGAATCAGCCCT | 59.782 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
168 | 169 | 1.079127 | ACGAACGGAATCAGCCCTG | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 4.45 |
169 | 170 | 2.464459 | CGAACGGAATCAGCCCTGC | 61.464 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
170 | 171 | 2.044946 | AACGGAATCAGCCCTGCC | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
171 | 172 | 3.976701 | AACGGAATCAGCCCTGCCG | 62.977 | 63.158 | 10.08 | 10.08 | 46.83 | 5.69 |
173 | 174 | 3.797353 | GGAATCAGCCCTGCCGGA | 61.797 | 66.667 | 5.05 | 0.00 | 0.00 | 5.14 |
174 | 175 | 2.203126 | GAATCAGCCCTGCCGGAG | 60.203 | 66.667 | 5.05 | 0.00 | 0.00 | 4.63 |
188 | 189 | 2.810439 | CCGGAGGCAAATTTGACAAA | 57.190 | 45.000 | 25.59 | 2.48 | 46.14 | 2.83 |
189 | 190 | 3.317603 | CCGGAGGCAAATTTGACAAAT | 57.682 | 42.857 | 25.59 | 7.62 | 46.14 | 2.32 |
190 | 191 | 3.663025 | CCGGAGGCAAATTTGACAAATT | 58.337 | 40.909 | 25.59 | 18.41 | 46.14 | 1.82 |
191 | 192 | 4.064388 | CCGGAGGCAAATTTGACAAATTT | 58.936 | 39.130 | 26.12 | 26.12 | 45.05 | 1.82 |
216 | 217 | 8.956533 | TGACCTATAATCGAAATCAAATCACA | 57.043 | 30.769 | 0.00 | 0.00 | 0.00 | 3.58 |
217 | 218 | 9.045223 | TGACCTATAATCGAAATCAAATCACAG | 57.955 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
218 | 219 | 9.261180 | GACCTATAATCGAAATCAAATCACAGA | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
219 | 220 | 9.613428 | ACCTATAATCGAAATCAAATCACAGAA | 57.387 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
224 | 225 | 8.679288 | AATCGAAATCAAATCACAGAATGAAC | 57.321 | 30.769 | 0.00 | 0.00 | 41.93 | 3.18 |
225 | 226 | 7.439157 | TCGAAATCAAATCACAGAATGAACT | 57.561 | 32.000 | 0.00 | 0.00 | 41.93 | 3.01 |
226 | 227 | 7.300320 | TCGAAATCAAATCACAGAATGAACTG | 58.700 | 34.615 | 0.00 | 0.00 | 41.93 | 3.16 |
227 | 228 | 6.525628 | CGAAATCAAATCACAGAATGAACTGG | 59.474 | 38.462 | 0.00 | 0.00 | 41.93 | 4.00 |
228 | 229 | 6.906157 | AATCAAATCACAGAATGAACTGGT | 57.094 | 33.333 | 0.00 | 0.00 | 41.93 | 4.00 |
229 | 230 | 6.906157 | ATCAAATCACAGAATGAACTGGTT | 57.094 | 33.333 | 0.00 | 0.00 | 41.93 | 3.67 |
230 | 231 | 6.075762 | TCAAATCACAGAATGAACTGGTTG | 57.924 | 37.500 | 0.00 | 0.00 | 41.93 | 3.77 |
231 | 232 | 4.510038 | AATCACAGAATGAACTGGTTGC | 57.490 | 40.909 | 0.00 | 0.00 | 41.93 | 4.17 |
232 | 233 | 1.872952 | TCACAGAATGAACTGGTTGCG | 59.127 | 47.619 | 0.00 | 0.00 | 39.69 | 4.85 |
233 | 234 | 1.872952 | CACAGAATGAACTGGTTGCGA | 59.127 | 47.619 | 0.00 | 0.00 | 39.69 | 5.10 |
234 | 235 | 2.290367 | CACAGAATGAACTGGTTGCGAA | 59.710 | 45.455 | 0.00 | 0.00 | 39.69 | 4.70 |
235 | 236 | 2.948979 | ACAGAATGAACTGGTTGCGAAA | 59.051 | 40.909 | 0.00 | 0.00 | 39.69 | 3.46 |
236 | 237 | 3.243068 | ACAGAATGAACTGGTTGCGAAAC | 60.243 | 43.478 | 0.00 | 0.00 | 39.69 | 2.78 |
237 | 238 | 3.003689 | CAGAATGAACTGGTTGCGAAACT | 59.996 | 43.478 | 6.17 | 0.00 | 39.69 | 2.66 |
238 | 239 | 4.213270 | CAGAATGAACTGGTTGCGAAACTA | 59.787 | 41.667 | 6.17 | 0.00 | 39.69 | 2.24 |
239 | 240 | 5.003804 | AGAATGAACTGGTTGCGAAACTAT | 58.996 | 37.500 | 6.17 | 0.00 | 0.00 | 2.12 |
240 | 241 | 5.473504 | AGAATGAACTGGTTGCGAAACTATT | 59.526 | 36.000 | 6.17 | 0.00 | 0.00 | 1.73 |
241 | 242 | 5.705609 | ATGAACTGGTTGCGAAACTATTT | 57.294 | 34.783 | 6.17 | 0.00 | 0.00 | 1.40 |
242 | 243 | 5.103290 | TGAACTGGTTGCGAAACTATTTC | 57.897 | 39.130 | 13.74 | 13.74 | 36.32 | 2.17 |
243 | 244 | 4.576873 | TGAACTGGTTGCGAAACTATTTCA | 59.423 | 37.500 | 17.86 | 17.86 | 39.63 | 2.69 |
244 | 245 | 4.483476 | ACTGGTTGCGAAACTATTTCAC | 57.517 | 40.909 | 6.17 | 0.00 | 39.63 | 3.18 |
245 | 246 | 4.134563 | ACTGGTTGCGAAACTATTTCACT | 58.865 | 39.130 | 6.17 | 0.00 | 39.63 | 3.41 |
246 | 247 | 4.213482 | ACTGGTTGCGAAACTATTTCACTC | 59.787 | 41.667 | 6.17 | 0.00 | 39.63 | 3.51 |
247 | 248 | 3.500680 | TGGTTGCGAAACTATTTCACTCC | 59.499 | 43.478 | 6.17 | 1.39 | 39.63 | 3.85 |
248 | 249 | 3.119955 | GGTTGCGAAACTATTTCACTCCC | 60.120 | 47.826 | 6.17 | 0.00 | 39.63 | 4.30 |
249 | 250 | 2.706890 | TGCGAAACTATTTCACTCCCC | 58.293 | 47.619 | 2.50 | 0.00 | 39.63 | 4.81 |
250 | 251 | 2.304761 | TGCGAAACTATTTCACTCCCCT | 59.695 | 45.455 | 2.50 | 0.00 | 39.63 | 4.79 |
251 | 252 | 2.678336 | GCGAAACTATTTCACTCCCCTG | 59.322 | 50.000 | 2.50 | 0.00 | 39.63 | 4.45 |
252 | 253 | 3.618997 | GCGAAACTATTTCACTCCCCTGA | 60.619 | 47.826 | 2.50 | 0.00 | 39.63 | 3.86 |
253 | 254 | 3.933332 | CGAAACTATTTCACTCCCCTGAC | 59.067 | 47.826 | 2.50 | 0.00 | 39.63 | 3.51 |
254 | 255 | 4.262617 | GAAACTATTTCACTCCCCTGACC | 58.737 | 47.826 | 0.00 | 0.00 | 39.45 | 4.02 |
255 | 256 | 2.197465 | ACTATTTCACTCCCCTGACCC | 58.803 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
256 | 257 | 2.225908 | ACTATTTCACTCCCCTGACCCT | 60.226 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
257 | 258 | 1.760405 | ATTTCACTCCCCTGACCCTT | 58.240 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
258 | 259 | 1.529744 | TTTCACTCCCCTGACCCTTT | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
259 | 260 | 1.529744 | TTCACTCCCCTGACCCTTTT | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 2.27 |
260 | 261 | 0.771127 | TCACTCCCCTGACCCTTTTG | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
261 | 262 | 0.478507 | CACTCCCCTGACCCTTTTGT | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
262 | 263 | 0.478507 | ACTCCCCTGACCCTTTTGTG | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
263 | 264 | 0.478507 | CTCCCCTGACCCTTTTGTGT | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
264 | 265 | 1.702957 | CTCCCCTGACCCTTTTGTGTA | 59.297 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
265 | 266 | 1.702957 | TCCCCTGACCCTTTTGTGTAG | 59.297 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
266 | 267 | 1.534729 | CCCTGACCCTTTTGTGTAGC | 58.465 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
267 | 268 | 1.156736 | CCTGACCCTTTTGTGTAGCG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
268 | 269 | 0.517316 | CTGACCCTTTTGTGTAGCGC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 5.92 |
269 | 270 | 0.887387 | TGACCCTTTTGTGTAGCGCC | 60.887 | 55.000 | 2.29 | 0.00 | 0.00 | 6.53 |
270 | 271 | 1.583495 | GACCCTTTTGTGTAGCGCCC | 61.583 | 60.000 | 2.29 | 0.00 | 0.00 | 6.13 |
271 | 272 | 1.602323 | CCCTTTTGTGTAGCGCCCA | 60.602 | 57.895 | 2.29 | 0.00 | 0.00 | 5.36 |
272 | 273 | 1.586154 | CCCTTTTGTGTAGCGCCCAG | 61.586 | 60.000 | 2.29 | 0.00 | 0.00 | 4.45 |
273 | 274 | 1.586154 | CCTTTTGTGTAGCGCCCAGG | 61.586 | 60.000 | 2.29 | 0.00 | 0.00 | 4.45 |
274 | 275 | 2.200170 | CTTTTGTGTAGCGCCCAGGC | 62.200 | 60.000 | 2.29 | 0.00 | 37.85 | 4.85 |
285 | 286 | 4.087892 | CCCAGGCGCTGCACTAGT | 62.088 | 66.667 | 7.64 | 0.00 | 0.00 | 2.57 |
286 | 287 | 2.816958 | CCAGGCGCTGCACTAGTG | 60.817 | 66.667 | 18.93 | 18.93 | 39.95 | 2.74 |
296 | 297 | 3.566261 | CACTAGTGCAACGCCCAG | 58.434 | 61.111 | 10.54 | 0.00 | 45.86 | 4.45 |
297 | 298 | 1.005037 | CACTAGTGCAACGCCCAGA | 60.005 | 57.895 | 10.54 | 0.00 | 45.86 | 3.86 |
298 | 299 | 0.602638 | CACTAGTGCAACGCCCAGAA | 60.603 | 55.000 | 10.54 | 0.00 | 45.86 | 3.02 |
299 | 300 | 0.320771 | ACTAGTGCAACGCCCAGAAG | 60.321 | 55.000 | 0.00 | 0.00 | 45.86 | 2.85 |
300 | 301 | 1.639298 | CTAGTGCAACGCCCAGAAGC | 61.639 | 60.000 | 0.00 | 0.00 | 45.86 | 3.86 |
301 | 302 | 2.111999 | TAGTGCAACGCCCAGAAGCT | 62.112 | 55.000 | 0.00 | 0.00 | 45.86 | 3.74 |
302 | 303 | 1.671054 | GTGCAACGCCCAGAAGCTA | 60.671 | 57.895 | 0.00 | 0.00 | 0.00 | 3.32 |
303 | 304 | 1.375908 | TGCAACGCCCAGAAGCTAG | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 3.42 |
304 | 305 | 2.109126 | GCAACGCCCAGAAGCTAGG | 61.109 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
305 | 306 | 2.109126 | CAACGCCCAGAAGCTAGGC | 61.109 | 63.158 | 6.87 | 6.87 | 43.53 | 3.93 |
316 | 317 | 2.496817 | GCTAGGCGCTGCACTAGT | 59.503 | 61.111 | 21.78 | 0.00 | 39.07 | 2.57 |
317 | 318 | 1.880340 | GCTAGGCGCTGCACTAGTG | 60.880 | 63.158 | 18.93 | 18.93 | 39.07 | 2.74 |
327 | 328 | 3.566261 | CACTAGTGCAACGCCCAG | 58.434 | 61.111 | 10.54 | 0.00 | 45.86 | 4.45 |
328 | 329 | 2.034879 | CACTAGTGCAACGCCCAGG | 61.035 | 63.158 | 10.54 | 0.00 | 45.86 | 4.45 |
329 | 330 | 2.214216 | ACTAGTGCAACGCCCAGGA | 61.214 | 57.895 | 0.00 | 0.00 | 45.86 | 3.86 |
330 | 331 | 1.448540 | CTAGTGCAACGCCCAGGAG | 60.449 | 63.158 | 0.00 | 0.00 | 45.86 | 3.69 |
331 | 332 | 3.605749 | TAGTGCAACGCCCAGGAGC | 62.606 | 63.158 | 0.00 | 0.00 | 45.86 | 4.70 |
333 | 334 | 3.318384 | TGCAACGCCCAGGAGCTA | 61.318 | 61.111 | 0.00 | 0.00 | 0.00 | 3.32 |
334 | 335 | 2.512515 | GCAACGCCCAGGAGCTAG | 60.513 | 66.667 | 0.00 | 0.00 | 0.00 | 3.42 |
335 | 336 | 2.187946 | CAACGCCCAGGAGCTAGG | 59.812 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
336 | 337 | 3.787001 | AACGCCCAGGAGCTAGGC | 61.787 | 66.667 | 6.50 | 6.50 | 43.53 | 3.93 |
347 | 348 | 3.494336 | GCTAGGCGCTGCACTGTG | 61.494 | 66.667 | 7.64 | 2.76 | 35.14 | 3.66 |
348 | 349 | 2.047844 | CTAGGCGCTGCACTGTGT | 60.048 | 61.111 | 7.64 | 0.00 | 0.00 | 3.72 |
349 | 350 | 1.215382 | CTAGGCGCTGCACTGTGTA | 59.785 | 57.895 | 7.64 | 3.78 | 0.00 | 2.90 |
350 | 351 | 0.803768 | CTAGGCGCTGCACTGTGTAG | 60.804 | 60.000 | 19.77 | 19.77 | 33.01 | 2.74 |
351 | 352 | 1.532604 | TAGGCGCTGCACTGTGTAGT | 61.533 | 55.000 | 23.60 | 9.32 | 37.75 | 2.73 |
359 | 360 | 2.030562 | ACTGTGTAGTGTGGCGCC | 59.969 | 61.111 | 22.73 | 22.73 | 35.34 | 6.53 |
360 | 361 | 2.343758 | CTGTGTAGTGTGGCGCCT | 59.656 | 61.111 | 29.70 | 9.99 | 0.00 | 5.52 |
361 | 362 | 1.183030 | ACTGTGTAGTGTGGCGCCTA | 61.183 | 55.000 | 29.70 | 14.39 | 35.34 | 3.93 |
362 | 363 | 0.458543 | CTGTGTAGTGTGGCGCCTAG | 60.459 | 60.000 | 29.70 | 7.79 | 0.00 | 3.02 |
375 | 376 | 2.416678 | CCTAGCTCTCAGGCGCTG | 59.583 | 66.667 | 7.64 | 3.67 | 37.05 | 5.18 |
376 | 377 | 2.279385 | CTAGCTCTCAGGCGCTGC | 60.279 | 66.667 | 7.64 | 2.66 | 37.05 | 5.25 |
377 | 378 | 3.070576 | TAGCTCTCAGGCGCTGCA | 61.071 | 61.111 | 7.64 | 0.00 | 37.05 | 4.41 |
378 | 379 | 3.362399 | TAGCTCTCAGGCGCTGCAC | 62.362 | 63.158 | 7.64 | 0.00 | 37.05 | 4.57 |
388 | 389 | 4.081030 | CGCTGCACGCTGACTTGG | 62.081 | 66.667 | 0.00 | 0.00 | 36.13 | 3.61 |
389 | 390 | 4.395583 | GCTGCACGCTGACTTGGC | 62.396 | 66.667 | 0.00 | 0.00 | 35.14 | 4.52 |
390 | 391 | 3.730761 | CTGCACGCTGACTTGGCC | 61.731 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
391 | 392 | 4.560743 | TGCACGCTGACTTGGCCA | 62.561 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
392 | 393 | 4.030452 | GCACGCTGACTTGGCCAC | 62.030 | 66.667 | 3.88 | 0.00 | 0.00 | 5.01 |
393 | 394 | 2.591429 | CACGCTGACTTGGCCACA | 60.591 | 61.111 | 3.88 | 0.00 | 0.00 | 4.17 |
394 | 395 | 1.968017 | CACGCTGACTTGGCCACAT | 60.968 | 57.895 | 3.88 | 0.00 | 0.00 | 3.21 |
395 | 396 | 0.673333 | CACGCTGACTTGGCCACATA | 60.673 | 55.000 | 3.88 | 0.00 | 0.00 | 2.29 |
396 | 397 | 0.253044 | ACGCTGACTTGGCCACATAT | 59.747 | 50.000 | 3.88 | 0.00 | 0.00 | 1.78 |
397 | 398 | 0.659427 | CGCTGACTTGGCCACATATG | 59.341 | 55.000 | 3.88 | 0.00 | 0.00 | 1.78 |
406 | 407 | 3.717899 | CCACATATGGGTGCGACG | 58.282 | 61.111 | 7.80 | 0.00 | 43.04 | 5.12 |
407 | 408 | 2.534019 | CCACATATGGGTGCGACGC | 61.534 | 63.158 | 14.19 | 14.19 | 43.04 | 5.19 |
408 | 409 | 1.521457 | CACATATGGGTGCGACGCT | 60.521 | 57.895 | 22.08 | 2.17 | 31.67 | 5.07 |
409 | 410 | 1.521457 | ACATATGGGTGCGACGCTG | 60.521 | 57.895 | 22.08 | 11.28 | 31.67 | 5.18 |
410 | 411 | 2.108976 | ATATGGGTGCGACGCTGG | 59.891 | 61.111 | 22.08 | 0.00 | 31.67 | 4.85 |
411 | 412 | 4.830765 | TATGGGTGCGACGCTGGC | 62.831 | 66.667 | 22.08 | 10.89 | 31.67 | 4.85 |
424 | 425 | 3.833645 | CTGGCCGTGTAGCGCCTA | 61.834 | 66.667 | 2.29 | 0.00 | 39.71 | 3.93 |
425 | 426 | 3.151710 | TGGCCGTGTAGCGCCTAT | 61.152 | 61.111 | 2.29 | 0.00 | 39.71 | 2.57 |
426 | 427 | 2.355956 | GGCCGTGTAGCGCCTATC | 60.356 | 66.667 | 2.29 | 0.00 | 39.71 | 2.08 |
427 | 428 | 2.728817 | GCCGTGTAGCGCCTATCT | 59.271 | 61.111 | 2.29 | 0.00 | 39.71 | 1.98 |
428 | 429 | 1.661821 | GCCGTGTAGCGCCTATCTG | 60.662 | 63.158 | 2.29 | 0.00 | 39.71 | 2.90 |
429 | 430 | 1.007271 | CCGTGTAGCGCCTATCTGG | 60.007 | 63.158 | 2.29 | 0.00 | 39.71 | 3.86 |
430 | 431 | 1.007271 | CGTGTAGCGCCTATCTGGG | 60.007 | 63.158 | 2.29 | 0.00 | 36.00 | 4.45 |
431 | 432 | 1.452953 | CGTGTAGCGCCTATCTGGGA | 61.453 | 60.000 | 2.29 | 0.00 | 36.00 | 4.37 |
432 | 433 | 0.315568 | GTGTAGCGCCTATCTGGGAG | 59.684 | 60.000 | 2.29 | 0.00 | 36.00 | 4.30 |
433 | 434 | 0.827925 | TGTAGCGCCTATCTGGGAGG | 60.828 | 60.000 | 2.29 | 0.00 | 37.12 | 4.30 |
439 | 440 | 1.227674 | CCTATCTGGGAGGCGTTGC | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
440 | 441 | 1.522092 | CTATCTGGGAGGCGTTGCA | 59.478 | 57.895 | 0.00 | 0.00 | 0.00 | 4.08 |
441 | 442 | 0.107456 | CTATCTGGGAGGCGTTGCAT | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
442 | 443 | 1.344438 | CTATCTGGGAGGCGTTGCATA | 59.656 | 52.381 | 0.00 | 0.00 | 0.00 | 3.14 |
443 | 444 | 0.107456 | ATCTGGGAGGCGTTGCATAG | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 2.23 |
444 | 445 | 0.975556 | TCTGGGAGGCGTTGCATAGA | 60.976 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
445 | 446 | 0.531532 | CTGGGAGGCGTTGCATAGAG | 60.532 | 60.000 | 0.00 | 0.00 | 0.00 | 2.43 |
446 | 447 | 1.227674 | GGGAGGCGTTGCATAGAGG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
447 | 448 | 1.227674 | GGAGGCGTTGCATAGAGGG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
448 | 449 | 1.522569 | GAGGCGTTGCATAGAGGGT | 59.477 | 57.895 | 0.00 | 0.00 | 0.00 | 4.34 |
449 | 450 | 0.811616 | GAGGCGTTGCATAGAGGGTG | 60.812 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
450 | 451 | 1.078426 | GGCGTTGCATAGAGGGTGT | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 4.16 |
451 | 452 | 1.369091 | GGCGTTGCATAGAGGGTGTG | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
452 | 453 | 1.369091 | GCGTTGCATAGAGGGTGTGG | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
453 | 454 | 1.369091 | CGTTGCATAGAGGGTGTGGC | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
454 | 455 | 1.078497 | TTGCATAGAGGGTGTGGCG | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
455 | 456 | 2.897350 | GCATAGAGGGTGTGGCGC | 60.897 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
456 | 457 | 2.203070 | CATAGAGGGTGTGGCGCC | 60.203 | 66.667 | 22.73 | 22.73 | 0.00 | 6.53 |
457 | 458 | 3.849951 | ATAGAGGGTGTGGCGCCG | 61.850 | 66.667 | 23.90 | 0.00 | 34.37 | 6.46 |
478 | 479 | 4.627801 | TGGCGGGCGCTACACAAA | 62.628 | 61.111 | 7.64 | 0.00 | 41.60 | 2.83 |
479 | 480 | 3.358707 | GGCGGGCGCTACACAAAA | 61.359 | 61.111 | 7.64 | 0.00 | 41.60 | 2.44 |
480 | 481 | 2.175811 | GCGGGCGCTACACAAAAG | 59.824 | 61.111 | 7.64 | 0.00 | 38.26 | 2.27 |
481 | 482 | 2.867472 | CGGGCGCTACACAAAAGG | 59.133 | 61.111 | 7.64 | 0.00 | 0.00 | 3.11 |
482 | 483 | 2.686816 | CGGGCGCTACACAAAAGGG | 61.687 | 63.158 | 7.64 | 0.00 | 0.00 | 3.95 |
483 | 484 | 1.602605 | GGGCGCTACACAAAAGGGT | 60.603 | 57.895 | 7.64 | 0.00 | 0.00 | 4.34 |
484 | 485 | 1.583495 | GGGCGCTACACAAAAGGGTC | 61.583 | 60.000 | 7.64 | 0.00 | 0.00 | 4.46 |
485 | 486 | 0.887387 | GGCGCTACACAAAAGGGTCA | 60.887 | 55.000 | 7.64 | 0.00 | 32.25 | 4.02 |
486 | 487 | 0.517316 | GCGCTACACAAAAGGGTCAG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
487 | 488 | 1.156736 | CGCTACACAAAAGGGTCAGG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
488 | 489 | 1.534729 | GCTACACAAAAGGGTCAGGG | 58.465 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
489 | 490 | 1.886655 | GCTACACAAAAGGGTCAGGGG | 60.887 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
490 | 491 | 1.702957 | CTACACAAAAGGGTCAGGGGA | 59.297 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
491 | 492 | 0.478507 | ACACAAAAGGGTCAGGGGAG | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
492 | 493 | 0.478507 | CACAAAAGGGTCAGGGGAGT | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
493 | 494 | 0.478507 | ACAAAAGGGTCAGGGGAGTG | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
494 | 495 | 0.771127 | CAAAAGGGTCAGGGGAGTGA | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
495 | 496 | 1.144913 | CAAAAGGGTCAGGGGAGTGAA | 59.855 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
496 | 497 | 1.529744 | AAAGGGTCAGGGGAGTGAAA | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
497 | 498 | 1.760405 | AAGGGTCAGGGGAGTGAAAT | 58.240 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
498 | 499 | 2.661176 | AGGGTCAGGGGAGTGAAATA | 57.339 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
499 | 500 | 2.482494 | AGGGTCAGGGGAGTGAAATAG | 58.518 | 52.381 | 0.00 | 0.00 | 0.00 | 1.73 |
500 | 501 | 2.197465 | GGGTCAGGGGAGTGAAATAGT | 58.803 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
501 | 502 | 2.576648 | GGGTCAGGGGAGTGAAATAGTT | 59.423 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
502 | 503 | 3.010250 | GGGTCAGGGGAGTGAAATAGTTT | 59.990 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
503 | 504 | 4.262617 | GGTCAGGGGAGTGAAATAGTTTC | 58.737 | 47.826 | 0.00 | 0.00 | 40.08 | 2.78 |
504 | 505 | 3.933332 | GTCAGGGGAGTGAAATAGTTTCG | 59.067 | 47.826 | 0.00 | 0.00 | 42.55 | 3.46 |
512 | 513 | 4.483476 | GTGAAATAGTTTCGCAACCAGT | 57.517 | 40.909 | 10.21 | 0.00 | 46.56 | 4.00 |
513 | 514 | 4.855531 | GTGAAATAGTTTCGCAACCAGTT | 58.144 | 39.130 | 10.21 | 0.00 | 46.56 | 3.16 |
514 | 515 | 4.909880 | GTGAAATAGTTTCGCAACCAGTTC | 59.090 | 41.667 | 10.21 | 0.41 | 46.56 | 3.01 |
515 | 516 | 4.576873 | TGAAATAGTTTCGCAACCAGTTCA | 59.423 | 37.500 | 5.34 | 5.34 | 42.55 | 3.18 |
516 | 517 | 5.240623 | TGAAATAGTTTCGCAACCAGTTCAT | 59.759 | 36.000 | 5.34 | 0.00 | 42.55 | 2.57 |
517 | 518 | 5.705609 | AATAGTTTCGCAACCAGTTCATT | 57.294 | 34.783 | 0.00 | 0.00 | 32.70 | 2.57 |
518 | 519 | 3.626028 | AGTTTCGCAACCAGTTCATTC | 57.374 | 42.857 | 0.00 | 0.00 | 32.70 | 2.67 |
519 | 520 | 3.214328 | AGTTTCGCAACCAGTTCATTCT | 58.786 | 40.909 | 0.00 | 0.00 | 32.70 | 2.40 |
520 | 521 | 3.003689 | AGTTTCGCAACCAGTTCATTCTG | 59.996 | 43.478 | 0.00 | 0.00 | 32.70 | 3.02 |
521 | 522 | 2.254546 | TCGCAACCAGTTCATTCTGT | 57.745 | 45.000 | 0.00 | 0.00 | 34.02 | 3.41 |
522 | 523 | 1.872952 | TCGCAACCAGTTCATTCTGTG | 59.127 | 47.619 | 0.00 | 0.00 | 34.02 | 3.66 |
523 | 524 | 1.872952 | CGCAACCAGTTCATTCTGTGA | 59.127 | 47.619 | 0.00 | 0.00 | 34.02 | 3.58 |
524 | 525 | 2.485426 | CGCAACCAGTTCATTCTGTGAT | 59.515 | 45.455 | 0.00 | 0.00 | 36.54 | 3.06 |
525 | 526 | 3.058016 | CGCAACCAGTTCATTCTGTGATT | 60.058 | 43.478 | 0.00 | 0.00 | 36.54 | 2.57 |
526 | 527 | 4.557296 | CGCAACCAGTTCATTCTGTGATTT | 60.557 | 41.667 | 0.00 | 0.00 | 36.54 | 2.17 |
527 | 528 | 4.682860 | GCAACCAGTTCATTCTGTGATTTG | 59.317 | 41.667 | 0.00 | 0.00 | 36.54 | 2.32 |
528 | 529 | 5.507817 | GCAACCAGTTCATTCTGTGATTTGA | 60.508 | 40.000 | 0.00 | 0.00 | 36.54 | 2.69 |
529 | 530 | 6.684686 | CAACCAGTTCATTCTGTGATTTGAT | 58.315 | 36.000 | 0.00 | 0.00 | 36.54 | 2.57 |
530 | 531 | 6.906157 | ACCAGTTCATTCTGTGATTTGATT | 57.094 | 33.333 | 0.00 | 0.00 | 36.54 | 2.57 |
531 | 532 | 7.294017 | ACCAGTTCATTCTGTGATTTGATTT | 57.706 | 32.000 | 0.00 | 0.00 | 36.54 | 2.17 |
532 | 533 | 7.373493 | ACCAGTTCATTCTGTGATTTGATTTC | 58.627 | 34.615 | 0.00 | 0.00 | 36.54 | 2.17 |
533 | 534 | 6.525628 | CCAGTTCATTCTGTGATTTGATTTCG | 59.474 | 38.462 | 0.00 | 0.00 | 36.54 | 3.46 |
534 | 535 | 7.300320 | CAGTTCATTCTGTGATTTGATTTCGA | 58.700 | 34.615 | 0.00 | 0.00 | 36.54 | 3.71 |
535 | 536 | 7.966753 | CAGTTCATTCTGTGATTTGATTTCGAT | 59.033 | 33.333 | 0.00 | 0.00 | 36.54 | 3.59 |
536 | 537 | 8.517878 | AGTTCATTCTGTGATTTGATTTCGATT | 58.482 | 29.630 | 0.00 | 0.00 | 36.54 | 3.34 |
537 | 538 | 9.773328 | GTTCATTCTGTGATTTGATTTCGATTA | 57.227 | 29.630 | 0.00 | 0.00 | 36.54 | 1.75 |
542 | 543 | 9.613428 | TTCTGTGATTTGATTTCGATTATAGGT | 57.387 | 29.630 | 0.00 | 0.00 | 0.00 | 3.08 |
543 | 544 | 9.261180 | TCTGTGATTTGATTTCGATTATAGGTC | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
544 | 545 | 8.956533 | TGTGATTTGATTTCGATTATAGGTCA | 57.043 | 30.769 | 0.00 | 0.00 | 0.00 | 4.02 |
545 | 546 | 9.389755 | TGTGATTTGATTTCGATTATAGGTCAA | 57.610 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
844 | 845 | 3.855853 | GGCCGCCTCCTCCTCTTC | 61.856 | 72.222 | 0.71 | 0.00 | 0.00 | 2.87 |
1017 | 1018 | 3.122297 | CGGCATGTCTCTTGATCTCTTC | 58.878 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1020 | 1021 | 4.370917 | GCATGTCTCTTGATCTCTTCTCC | 58.629 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
1023 | 1024 | 5.191727 | TGTCTCTTGATCTCTTCTCCTCT | 57.808 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
1092 | 1093 | 2.248431 | GTCACGTTCGTTGCTGCC | 59.752 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
1096 | 1097 | 4.012895 | CGTTCGTTGCTGCCGCTT | 62.013 | 61.111 | 0.70 | 0.00 | 36.97 | 4.68 |
1536 | 1537 | 3.280920 | GGCACAGCCTTATCTCTCG | 57.719 | 57.895 | 0.00 | 0.00 | 46.69 | 4.04 |
1731 | 1732 | 2.158957 | GGCCAATTCTACTCATCACCGA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
1773 | 1774 | 1.193874 | CCACGAACTAAAGCGGTTCAC | 59.806 | 52.381 | 0.00 | 0.00 | 41.99 | 3.18 |
1792 | 1793 | 2.947652 | CACAGTAGCATTGGCATAAGCT | 59.052 | 45.455 | 12.41 | 12.41 | 44.61 | 3.74 |
1794 | 1795 | 4.576053 | CACAGTAGCATTGGCATAAGCTTA | 59.424 | 41.667 | 8.99 | 8.99 | 44.61 | 3.09 |
1818 | 1819 | 0.543749 | AGGTAAGGCTGATGCAGGAC | 59.456 | 55.000 | 0.00 | 0.00 | 41.91 | 3.85 |
1838 | 1839 | 4.821805 | GGACAGGATTGAAGACTTTGTGAA | 59.178 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
1851 | 1852 | 5.641209 | AGACTTTGTGAAGCATATGTCAGAC | 59.359 | 40.000 | 4.29 | 0.00 | 36.29 | 3.51 |
1971 | 1972 | 1.906574 | GAGTACTTGGTGACCCATGGA | 59.093 | 52.381 | 15.22 | 0.00 | 41.49 | 3.41 |
2058 | 2059 | 5.079689 | AGAGAGCTAAACTTGGCTACTTC | 57.920 | 43.478 | 0.00 | 0.47 | 45.48 | 3.01 |
2066 | 2067 | 6.016192 | GCTAAACTTGGCTACTTCCTTTTCTT | 60.016 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
2069 | 2070 | 3.764237 | TGGCTACTTCCTTTTCTTCGT | 57.236 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
2136 | 2137 | 3.074412 | ACTGTTTTCTGTTATCCCTGCG | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 5.18 |
2143 | 2144 | 1.480954 | CTGTTATCCCTGCGTGTAGGT | 59.519 | 52.381 | 3.27 | 0.00 | 36.02 | 3.08 |
2152 | 2153 | 2.038837 | GCGTGTAGGTTTGGGAGGC | 61.039 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
2207 | 2208 | 0.896940 | CAAGCTGCCTCCAACCACAT | 60.897 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2407 | 2408 | 0.986019 | ACCGGATACAGGGATTGGCA | 60.986 | 55.000 | 9.46 | 0.00 | 35.02 | 4.92 |
2572 | 2704 | 6.757897 | AATCCTTTCGTTTTATGATCTGCA | 57.242 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
2820 | 2958 | 5.842907 | AGGAATGGTTTGCTGAAAAGTAAC | 58.157 | 37.500 | 0.00 | 0.00 | 31.54 | 2.50 |
3006 | 3144 | 4.416505 | GAACAAGAAGAGGCATGTTCTG | 57.583 | 45.455 | 11.82 | 8.51 | 45.05 | 3.02 |
3120 | 3258 | 1.870055 | CTCCAAGCAATGCGGCAGTT | 61.870 | 55.000 | 9.25 | 0.26 | 35.83 | 3.16 |
3624 | 3762 | 2.677875 | CTGGAAGGTGGGCTTGGC | 60.678 | 66.667 | 0.00 | 0.00 | 0.00 | 4.52 |
3810 | 3948 | 6.040616 | CCGACTCTCCAGTTGTAAAGGTATAT | 59.959 | 42.308 | 0.00 | 0.00 | 32.49 | 0.86 |
3847 | 3985 | 2.161855 | GTGTCAGGTCAATTGCATGGA | 58.838 | 47.619 | 12.34 | 0.00 | 0.00 | 3.41 |
3868 | 4006 | 5.014123 | TGGAATGTCTATGTTTTCTGGGTCT | 59.986 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3943 | 4081 | 2.564947 | AGTCATGGACTTCACTCAGGAC | 59.435 | 50.000 | 0.00 | 0.00 | 40.28 | 3.85 |
4033 | 4172 | 8.523915 | TGAATCATATGCTGTTTGGTCTTTAT | 57.476 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
4039 | 4179 | 4.079253 | TGCTGTTTGGTCTTTATCCCTTC | 58.921 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
4077 | 4217 | 9.112725 | GGTTCACTACCTTTTTAAGAGTGTAAA | 57.887 | 33.333 | 0.00 | 0.00 | 44.10 | 2.01 |
4095 | 4235 | 6.262273 | AGTGTAAATTTGGTCAACACTGTAGG | 59.738 | 38.462 | 18.43 | 0.00 | 46.62 | 3.18 |
4134 | 4274 | 5.916661 | ATAGCAAGTCTCGGAAAGTAGAA | 57.083 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
4452 | 4603 | 5.492895 | TGTGGTTGCCGAAGATAATTTAGA | 58.507 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
4546 | 4697 | 4.822026 | ACTCAACTTGGAGGATAAGAACG | 58.178 | 43.478 | 0.00 | 0.00 | 39.27 | 3.95 |
4548 | 4699 | 5.479375 | ACTCAACTTGGAGGATAAGAACGTA | 59.521 | 40.000 | 0.00 | 0.00 | 39.27 | 3.57 |
4549 | 4700 | 6.154706 | ACTCAACTTGGAGGATAAGAACGTAT | 59.845 | 38.462 | 0.00 | 0.00 | 39.27 | 3.06 |
4551 | 4702 | 7.039882 | TCAACTTGGAGGATAAGAACGTATTC | 58.960 | 38.462 | 0.00 | 0.00 | 34.78 | 1.75 |
4554 | 4709 | 6.156429 | ACTTGGAGGATAAGAACGTATTCCTT | 59.844 | 38.462 | 0.00 | 0.00 | 35.18 | 3.36 |
4779 | 5064 | 8.665685 | GGAACTTATATCCAACAGTAACAACAG | 58.334 | 37.037 | 0.00 | 0.00 | 36.92 | 3.16 |
4842 | 5128 | 9.030301 | GCATAAAACTGCAAAGAGTTTCTTTTA | 57.970 | 29.630 | 2.65 | 0.00 | 44.23 | 1.52 |
4872 | 5158 | 9.469807 | AAATGCAAATAGTTCAACGAAATGTTA | 57.530 | 25.926 | 0.00 | 0.00 | 39.29 | 2.41 |
4935 | 5221 | 3.132111 | GGGAGGAGTCAATGAGAGAGAAC | 59.868 | 52.174 | 0.00 | 0.00 | 0.00 | 3.01 |
4964 | 5250 | 6.321945 | CCTAAGAGTCCTTTAGGGAAGTACTC | 59.678 | 46.154 | 9.42 | 4.04 | 46.24 | 2.59 |
4965 | 5251 | 4.612401 | AGAGTCCTTTAGGGAAGTACTCC | 58.388 | 47.826 | 0.00 | 0.00 | 46.76 | 3.85 |
4966 | 5252 | 6.809392 | TAAGAGTCCTTTAGGGAAGTACTCCC | 60.809 | 46.154 | 17.92 | 17.92 | 46.76 | 4.30 |
4973 | 5259 | 2.502633 | GGAAGTACTCCCTCCGTCC | 58.497 | 63.158 | 0.00 | 0.00 | 38.44 | 4.79 |
4974 | 5260 | 1.042003 | GGAAGTACTCCCTCCGTCCC | 61.042 | 65.000 | 0.00 | 0.00 | 38.44 | 4.46 |
4976 | 5262 | 0.115745 | AAGTACTCCCTCCGTCCCAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
4977 | 5263 | 0.115745 | AGTACTCCCTCCGTCCCAAA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
4978 | 5264 | 0.978907 | GTACTCCCTCCGTCCCAAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
4979 | 5265 | 1.558294 | GTACTCCCTCCGTCCCAAAAT | 59.442 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
4980 | 5266 | 1.961133 | ACTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4981 | 5267 | 2.271777 | ACTCCCTCCGTCCCAAAATAA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
4982 | 5268 | 2.238898 | ACTCCCTCCGTCCCAAAATAAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
4983 | 5269 | 2.238898 | CTCCCTCCGTCCCAAAATAAGT | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
4984 | 5270 | 2.026636 | TCCCTCCGTCCCAAAATAAGTG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4985 | 5271 | 2.290705 | CCCTCCGTCCCAAAATAAGTGT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4986 | 5272 | 3.007635 | CCTCCGTCCCAAAATAAGTGTC | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4987 | 5273 | 3.307480 | CCTCCGTCCCAAAATAAGTGTCT | 60.307 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
4988 | 5274 | 4.324267 | CTCCGTCCCAAAATAAGTGTCTT | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
4989 | 5275 | 4.069304 | TCCGTCCCAAAATAAGTGTCTTG | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4990 | 5276 | 4.069304 | CCGTCCCAAAATAAGTGTCTTGA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4991 | 5277 | 4.083484 | CCGTCCCAAAATAAGTGTCTTGAC | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
4992 | 5278 | 4.083484 | CGTCCCAAAATAAGTGTCTTGACC | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
4993 | 5279 | 5.070685 | GTCCCAAAATAAGTGTCTTGACCT | 58.929 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
4994 | 5280 | 5.535030 | GTCCCAAAATAAGTGTCTTGACCTT | 59.465 | 40.000 | 0.00 | 4.52 | 0.00 | 3.50 |
5079 | 5385 | 4.299586 | TGTATCCACATTTGAGGCAAGA | 57.700 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
5175 | 5482 | 2.286294 | CGTCTGGCTATCTTCAACATGC | 59.714 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
5254 | 5561 | 6.656965 | TGGATGGCCAATCATATATTACCT | 57.343 | 37.500 | 10.96 | 0.00 | 42.49 | 3.08 |
5255 | 5562 | 6.662755 | TGGATGGCCAATCATATATTACCTC | 58.337 | 40.000 | 10.96 | 0.00 | 42.49 | 3.85 |
5256 | 5563 | 6.064717 | GGATGGCCAATCATATATTACCTCC | 58.935 | 44.000 | 10.96 | 2.40 | 36.98 | 4.30 |
5257 | 5564 | 6.353864 | GGATGGCCAATCATATATTACCTCCA | 60.354 | 42.308 | 10.96 | 0.00 | 36.98 | 3.86 |
5258 | 5565 | 6.656965 | TGGCCAATCATATATTACCTCCAT | 57.343 | 37.500 | 0.61 | 0.00 | 0.00 | 3.41 |
5259 | 5566 | 6.662755 | TGGCCAATCATATATTACCTCCATC | 58.337 | 40.000 | 0.61 | 0.00 | 0.00 | 3.51 |
5260 | 5567 | 6.064717 | GGCCAATCATATATTACCTCCATCC | 58.935 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5261 | 5568 | 6.064717 | GCCAATCATATATTACCTCCATCCC | 58.935 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5262 | 5569 | 6.353864 | GCCAATCATATATTACCTCCATCCCA | 60.354 | 42.308 | 0.00 | 0.00 | 0.00 | 4.37 |
5263 | 5570 | 7.641111 | GCCAATCATATATTACCTCCATCCCAT | 60.641 | 40.741 | 0.00 | 0.00 | 0.00 | 4.00 |
5264 | 5571 | 8.948362 | CCAATCATATATTACCTCCATCCCATA | 58.052 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
5266 | 5573 | 9.973880 | AATCATATATTACCTCCATCCCATAGA | 57.026 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
5268 | 5575 | 9.973880 | TCATATATTACCTCCATCCCATAGATT | 57.026 | 33.333 | 0.00 | 0.00 | 30.59 | 2.40 |
5271 | 5578 | 6.786843 | ATTACCTCCATCCCATAGATTTGT | 57.213 | 37.500 | 0.00 | 0.00 | 30.59 | 2.83 |
5272 | 5579 | 4.713792 | ACCTCCATCCCATAGATTTGTC | 57.286 | 45.455 | 0.00 | 0.00 | 30.59 | 3.18 |
5273 | 5580 | 4.310740 | ACCTCCATCCCATAGATTTGTCT | 58.689 | 43.478 | 0.00 | 0.00 | 30.59 | 3.41 |
5274 | 5581 | 5.476983 | ACCTCCATCCCATAGATTTGTCTA | 58.523 | 41.667 | 0.00 | 0.00 | 30.59 | 2.59 |
5275 | 5582 | 5.545723 | ACCTCCATCCCATAGATTTGTCTAG | 59.454 | 44.000 | 0.00 | 0.00 | 30.59 | 2.43 |
5276 | 5583 | 5.782331 | CCTCCATCCCATAGATTTGTCTAGA | 59.218 | 44.000 | 0.00 | 0.00 | 30.59 | 2.43 |
5277 | 5584 | 6.443206 | CCTCCATCCCATAGATTTGTCTAGAT | 59.557 | 42.308 | 0.00 | 0.00 | 30.59 | 1.98 |
5278 | 5585 | 7.621285 | CCTCCATCCCATAGATTTGTCTAGATA | 59.379 | 40.741 | 0.00 | 0.00 | 30.59 | 1.98 |
5279 | 5586 | 9.211410 | CTCCATCCCATAGATTTGTCTAGATAT | 57.789 | 37.037 | 0.00 | 0.00 | 30.59 | 1.63 |
5280 | 5587 | 8.985922 | TCCATCCCATAGATTTGTCTAGATATG | 58.014 | 37.037 | 0.00 | 0.00 | 30.59 | 1.78 |
5281 | 5588 | 8.209584 | CCATCCCATAGATTTGTCTAGATATGG | 58.790 | 40.741 | 16.25 | 16.25 | 39.46 | 2.74 |
5282 | 5589 | 8.985922 | CATCCCATAGATTTGTCTAGATATGGA | 58.014 | 37.037 | 21.71 | 12.44 | 41.34 | 3.41 |
5283 | 5590 | 9.741198 | ATCCCATAGATTTGTCTAGATATGGAT | 57.259 | 33.333 | 21.71 | 13.61 | 41.34 | 3.41 |
5284 | 5591 | 8.985922 | TCCCATAGATTTGTCTAGATATGGATG | 58.014 | 37.037 | 21.71 | 11.16 | 41.34 | 3.51 |
5285 | 5592 | 8.766476 | CCCATAGATTTGTCTAGATATGGATGT | 58.234 | 37.037 | 21.71 | 6.28 | 41.34 | 3.06 |
5322 | 5629 | 9.968870 | ACATCCGTATCTAGAAAAATCTAAGAC | 57.031 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
5323 | 5630 | 9.967346 | CATCCGTATCTAGAAAAATCTAAGACA | 57.033 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
5325 | 5632 | 9.404848 | TCCGTATCTAGAAAAATCTAAGACAGA | 57.595 | 33.333 | 0.00 | 0.00 | 37.79 | 3.41 |
5326 | 5633 | 9.672086 | CCGTATCTAGAAAAATCTAAGACAGAG | 57.328 | 37.037 | 0.00 | 0.00 | 36.48 | 3.35 |
5327 | 5634 | 9.672086 | CGTATCTAGAAAAATCTAAGACAGAGG | 57.328 | 37.037 | 0.00 | 0.00 | 36.48 | 3.69 |
5328 | 5635 | 9.974980 | GTATCTAGAAAAATCTAAGACAGAGGG | 57.025 | 37.037 | 0.00 | 0.00 | 36.48 | 4.30 |
5329 | 5636 | 8.846423 | ATCTAGAAAAATCTAAGACAGAGGGA | 57.154 | 34.615 | 0.00 | 0.00 | 36.48 | 4.20 |
5330 | 5637 | 8.299990 | TCTAGAAAAATCTAAGACAGAGGGAG | 57.700 | 38.462 | 0.00 | 0.00 | 36.48 | 4.30 |
5331 | 5638 | 6.943899 | AGAAAAATCTAAGACAGAGGGAGT | 57.056 | 37.500 | 0.00 | 0.00 | 36.48 | 3.85 |
5332 | 5639 | 9.191479 | CTAGAAAAATCTAAGACAGAGGGAGTA | 57.809 | 37.037 | 0.00 | 0.00 | 36.48 | 2.59 |
5333 | 5640 | 8.437274 | AGAAAAATCTAAGACAGAGGGAGTAA | 57.563 | 34.615 | 0.00 | 0.00 | 36.48 | 2.24 |
5334 | 5641 | 8.881262 | AGAAAAATCTAAGACAGAGGGAGTAAA | 58.119 | 33.333 | 0.00 | 0.00 | 36.48 | 2.01 |
5335 | 5642 | 9.503399 | GAAAAATCTAAGACAGAGGGAGTAAAA | 57.497 | 33.333 | 0.00 | 0.00 | 36.48 | 1.52 |
5336 | 5643 | 9.862149 | AAAAATCTAAGACAGAGGGAGTAAAAA | 57.138 | 29.630 | 0.00 | 0.00 | 36.48 | 1.94 |
5338 | 5645 | 9.674068 | AAATCTAAGACAGAGGGAGTAAAAATC | 57.326 | 33.333 | 0.00 | 0.00 | 36.48 | 2.17 |
5339 | 5646 | 8.616799 | ATCTAAGACAGAGGGAGTAAAAATCT | 57.383 | 34.615 | 0.00 | 0.00 | 36.48 | 2.40 |
5340 | 5647 | 9.716556 | ATCTAAGACAGAGGGAGTAAAAATCTA | 57.283 | 33.333 | 0.00 | 0.00 | 36.48 | 1.98 |
5341 | 5648 | 9.543231 | TCTAAGACAGAGGGAGTAAAAATCTAA | 57.457 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
5342 | 5649 | 9.810545 | CTAAGACAGAGGGAGTAAAAATCTAAG | 57.189 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
5343 | 5650 | 8.437274 | AAGACAGAGGGAGTAAAAATCTAAGA | 57.563 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
5344 | 5651 | 7.842982 | AGACAGAGGGAGTAAAAATCTAAGAC | 58.157 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
5345 | 5652 | 7.455008 | AGACAGAGGGAGTAAAAATCTAAGACA | 59.545 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
5346 | 5653 | 7.616313 | ACAGAGGGAGTAAAAATCTAAGACAG | 58.384 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
5347 | 5654 | 7.455008 | ACAGAGGGAGTAAAAATCTAAGACAGA | 59.545 | 37.037 | 0.00 | 0.00 | 37.79 | 3.41 |
5348 | 5655 | 7.978975 | CAGAGGGAGTAAAAATCTAAGACAGAG | 59.021 | 40.741 | 0.00 | 0.00 | 36.48 | 3.35 |
5349 | 5656 | 7.125053 | AGAGGGAGTAAAAATCTAAGACAGAGG | 59.875 | 40.741 | 0.00 | 0.00 | 36.48 | 3.69 |
5350 | 5657 | 6.157123 | AGGGAGTAAAAATCTAAGACAGAGGG | 59.843 | 42.308 | 0.00 | 0.00 | 36.48 | 4.30 |
5351 | 5658 | 6.156429 | GGGAGTAAAAATCTAAGACAGAGGGA | 59.844 | 42.308 | 0.00 | 0.00 | 36.48 | 4.20 |
5352 | 5659 | 7.269316 | GGAGTAAAAATCTAAGACAGAGGGAG | 58.731 | 42.308 | 0.00 | 0.00 | 36.48 | 4.30 |
5384 | 5691 | 2.593346 | AGCCACGATCAATCTCTCAC | 57.407 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5417 | 5724 | 4.279922 | GGGTACAAATACAAACAAGCTGGT | 59.720 | 41.667 | 0.00 | 0.00 | 32.40 | 4.00 |
5482 | 5789 | 5.937975 | ATCCAACAAAATAAGGTGGGATG | 57.062 | 39.130 | 0.00 | 0.00 | 44.41 | 3.51 |
5488 | 5795 | 7.665145 | CCAACAAAATAAGGTGGGATGAATTTT | 59.335 | 33.333 | 0.00 | 0.00 | 28.85 | 1.82 |
5489 | 5796 | 9.065798 | CAACAAAATAAGGTGGGATGAATTTTT | 57.934 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
5491 | 5798 | 9.942850 | ACAAAATAAGGTGGGATGAATTTTTAG | 57.057 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
5523 | 5830 | 5.496556 | TCACATTTAGATGGTGGTGGTAAG | 58.503 | 41.667 | 0.00 | 0.00 | 37.60 | 2.34 |
5531 | 5838 | 3.586470 | TGGTGGTGGTAAGTGTTCATT | 57.414 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
5606 | 5926 | 7.661437 | TCTTGCATCTATTTGTTGTGTCTACTT | 59.339 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
5607 | 5927 | 7.132694 | TGCATCTATTTGTTGTGTCTACTTG | 57.867 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5636 | 5956 | 4.433186 | TTTGTGCATTCGATGTTTAGGG | 57.567 | 40.909 | 0.00 | 0.00 | 0.00 | 3.53 |
5637 | 5957 | 1.742831 | TGTGCATTCGATGTTTAGGGC | 59.257 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
5638 | 5958 | 2.017049 | GTGCATTCGATGTTTAGGGCT | 58.983 | 47.619 | 0.00 | 0.00 | 0.00 | 5.19 |
5663 | 5983 | 3.696281 | TTTGCCATGAATGCGTCTATG | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 2.23 |
5667 | 5987 | 1.941975 | CCATGAATGCGTCTATGTGCA | 59.058 | 47.619 | 0.00 | 0.00 | 46.51 | 4.57 |
5670 | 5990 | 2.270923 | TGAATGCGTCTATGTGCACTC | 58.729 | 47.619 | 19.41 | 3.39 | 45.07 | 3.51 |
5678 | 5998 | 4.499188 | GCGTCTATGTGCACTCCTGTATTA | 60.499 | 45.833 | 19.41 | 0.00 | 0.00 | 0.98 |
5679 | 5999 | 5.773575 | CGTCTATGTGCACTCCTGTATTAT | 58.226 | 41.667 | 19.41 | 1.95 | 0.00 | 1.28 |
5898 | 6218 | 7.772757 | TCAATCTTGTGCATTGTGGTATATACA | 59.227 | 33.333 | 14.70 | 0.00 | 33.61 | 2.29 |
5932 | 6252 | 7.592938 | ACTTCTTTAATTGAACATCGCATCAA | 58.407 | 30.769 | 0.00 | 0.00 | 39.66 | 2.57 |
5941 | 6261 | 8.959734 | ATTGAACATCGCATCAATATTGTATG | 57.040 | 30.769 | 14.97 | 16.17 | 42.77 | 2.39 |
5970 | 6290 | 3.459232 | TGCATAGTCCTTCGATCCTTG | 57.541 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
5973 | 6293 | 3.432326 | GCATAGTCCTTCGATCCTTGGTT | 60.432 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
6002 | 6322 | 8.863049 | GTTTGCTTTAACACATCAGGATAATTG | 58.137 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
6016 | 6336 | 7.114754 | TCAGGATAATTGTTCAGCATTTCTCT | 58.885 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
6185 | 6505 | 7.057264 | AGTTAGAAGAATATTCAGGGCTTTCC | 58.943 | 38.462 | 17.56 | 0.42 | 0.00 | 3.13 |
6700 | 7023 | 3.126514 | CAGTTCACTGTCTTGATGGCATC | 59.873 | 47.826 | 20.52 | 20.52 | 39.09 | 3.91 |
6758 | 7081 | 6.639671 | GCGAAGAGCTAAAGGATGTATATG | 57.360 | 41.667 | 0.00 | 0.00 | 44.04 | 1.78 |
6767 | 7090 | 4.672587 | AAGGATGTATATGCAGTCGTGT | 57.327 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
6800 | 7123 | 3.718956 | AGGGCTGAGAAACTATAATGCCT | 59.281 | 43.478 | 0.00 | 0.00 | 39.12 | 4.75 |
6802 | 7125 | 3.251972 | GGCTGAGAAACTATAATGCCTGC | 59.748 | 47.826 | 0.00 | 0.00 | 36.52 | 4.85 |
6837 | 7160 | 4.507710 | TGTCTGGTATCAATCTGTGAAGC | 58.492 | 43.478 | 0.00 | 0.00 | 40.50 | 3.86 |
6879 | 7202 | 8.461249 | AAGATATGAAGAGAAATTGGTGGATG | 57.539 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
6901 | 7224 | 0.107993 | CATGGAAGAGCTTCGCCAGA | 60.108 | 55.000 | 8.13 | 0.00 | 40.37 | 3.86 |
6908 | 7231 | 0.671781 | GAGCTTCGCCAGATGTGTGT | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
6927 | 7250 | 9.896645 | ATGTGTGTTTATCTTGAGATGACTTAT | 57.103 | 29.630 | 3.79 | 0.00 | 36.05 | 1.73 |
6931 | 7254 | 8.535592 | GTGTTTATCTTGAGATGACTTATCACG | 58.464 | 37.037 | 3.79 | 0.00 | 37.79 | 4.35 |
6934 | 7257 | 4.424626 | TCTTGAGATGACTTATCACGTGC | 58.575 | 43.478 | 11.67 | 0.00 | 37.79 | 5.34 |
7180 | 7504 | 6.488062 | GCATTTCATCTCGAAGTTAAATGC | 57.512 | 37.500 | 21.74 | 21.74 | 46.60 | 3.56 |
7219 | 7543 | 2.937149 | GGTGCGTTTCTCTTAATCCCTC | 59.063 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
7296 | 7620 | 3.847671 | TGGAGTGTGTTGTAACATCCA | 57.152 | 42.857 | 12.28 | 12.28 | 41.59 | 3.41 |
7350 | 7674 | 2.163010 | TGTCCTACTCCTTTTCGTAGCG | 59.837 | 50.000 | 0.00 | 0.00 | 33.46 | 4.26 |
7409 | 7737 | 6.781943 | AGACTACTCTTGTACTAGTGTTCCT | 58.218 | 40.000 | 15.33 | 8.80 | 0.00 | 3.36 |
7458 | 7786 | 4.503007 | TCGCTGTTTTCGCTATCTGATTAC | 59.497 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
7477 | 7805 | 3.665745 | ACTGAAATTGGCACCATTGAC | 57.334 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
7526 | 7854 | 3.268013 | ACGTTTTTCACACTGCTATGC | 57.732 | 42.857 | 0.00 | 0.00 | 0.00 | 3.14 |
7534 | 7862 | 2.553602 | TCACACTGCTATGCCACAAAAG | 59.446 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
7624 | 7959 | 4.833478 | ATATATTGCCTGGCCTCTACAG | 57.167 | 45.455 | 17.53 | 0.00 | 35.74 | 2.74 |
7630 | 7965 | 0.683973 | CCTGGCCTCTACAGCATAGG | 59.316 | 60.000 | 3.32 | 0.00 | 34.65 | 2.57 |
7661 | 7997 | 5.539582 | TGCCATGTTTATTACAACGTCTC | 57.460 | 39.130 | 0.00 | 0.00 | 40.89 | 3.36 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 7.877612 | ACATGTGTGAATACATAGACAAACAGA | 59.122 | 33.333 | 0.00 | 0.00 | 39.17 | 3.41 |
1 | 2 | 8.032952 | ACATGTGTGAATACATAGACAAACAG | 57.967 | 34.615 | 0.00 | 0.00 | 39.17 | 3.16 |
2 | 3 | 7.977789 | ACATGTGTGAATACATAGACAAACA | 57.022 | 32.000 | 0.00 | 0.00 | 39.17 | 2.83 |
12 | 13 | 8.608317 | CGGAAACATAATACATGTGTGAATACA | 58.392 | 33.333 | 9.11 | 0.00 | 34.63 | 2.29 |
13 | 14 | 8.067784 | CCGGAAACATAATACATGTGTGAATAC | 58.932 | 37.037 | 9.11 | 0.00 | 31.80 | 1.89 |
14 | 15 | 7.771361 | ACCGGAAACATAATACATGTGTGAATA | 59.229 | 33.333 | 9.46 | 0.00 | 31.80 | 1.75 |
15 | 16 | 6.601613 | ACCGGAAACATAATACATGTGTGAAT | 59.398 | 34.615 | 9.46 | 0.00 | 31.80 | 2.57 |
16 | 17 | 5.941058 | ACCGGAAACATAATACATGTGTGAA | 59.059 | 36.000 | 9.46 | 0.00 | 31.80 | 3.18 |
17 | 18 | 5.492895 | ACCGGAAACATAATACATGTGTGA | 58.507 | 37.500 | 9.46 | 0.00 | 31.80 | 3.58 |
18 | 19 | 5.811399 | ACCGGAAACATAATACATGTGTG | 57.189 | 39.130 | 9.46 | 4.81 | 31.80 | 3.82 |
19 | 20 | 7.925043 | TTAACCGGAAACATAATACATGTGT | 57.075 | 32.000 | 9.46 | 0.00 | 31.80 | 3.72 |
20 | 21 | 9.872757 | GTATTAACCGGAAACATAATACATGTG | 57.127 | 33.333 | 9.46 | 0.00 | 39.40 | 3.21 |
21 | 22 | 9.616156 | TGTATTAACCGGAAACATAATACATGT | 57.384 | 29.630 | 22.31 | 2.69 | 42.13 | 3.21 |
29 | 30 | 9.048446 | GCTAGAATTGTATTAACCGGAAACATA | 57.952 | 33.333 | 9.46 | 0.00 | 0.00 | 2.29 |
30 | 31 | 7.554835 | TGCTAGAATTGTATTAACCGGAAACAT | 59.445 | 33.333 | 9.46 | 0.00 | 0.00 | 2.71 |
31 | 32 | 6.879993 | TGCTAGAATTGTATTAACCGGAAACA | 59.120 | 34.615 | 9.46 | 1.34 | 0.00 | 2.83 |
32 | 33 | 7.311364 | TGCTAGAATTGTATTAACCGGAAAC | 57.689 | 36.000 | 9.46 | 0.00 | 0.00 | 2.78 |
33 | 34 | 7.771361 | TCATGCTAGAATTGTATTAACCGGAAA | 59.229 | 33.333 | 9.46 | 1.61 | 0.00 | 3.13 |
34 | 35 | 7.276658 | TCATGCTAGAATTGTATTAACCGGAA | 58.723 | 34.615 | 9.46 | 0.00 | 0.00 | 4.30 |
35 | 36 | 6.822442 | TCATGCTAGAATTGTATTAACCGGA | 58.178 | 36.000 | 9.46 | 0.00 | 0.00 | 5.14 |
36 | 37 | 7.490962 | TTCATGCTAGAATTGTATTAACCGG | 57.509 | 36.000 | 0.00 | 0.00 | 0.00 | 5.28 |
110 | 111 | 5.478332 | GGATGAAGGAAATATGCCCTAAAGG | 59.522 | 44.000 | 0.00 | 0.00 | 39.47 | 3.11 |
111 | 112 | 5.478332 | GGGATGAAGGAAATATGCCCTAAAG | 59.522 | 44.000 | 0.00 | 0.00 | 31.36 | 1.85 |
112 | 113 | 5.393866 | GGGATGAAGGAAATATGCCCTAAA | 58.606 | 41.667 | 0.00 | 0.00 | 31.36 | 1.85 |
113 | 114 | 4.202673 | GGGGATGAAGGAAATATGCCCTAA | 60.203 | 45.833 | 5.86 | 0.00 | 45.81 | 2.69 |
114 | 115 | 3.333680 | GGGGATGAAGGAAATATGCCCTA | 59.666 | 47.826 | 5.86 | 0.00 | 45.81 | 3.53 |
115 | 116 | 2.110721 | GGGGATGAAGGAAATATGCCCT | 59.889 | 50.000 | 5.86 | 0.00 | 45.81 | 5.19 |
116 | 117 | 2.529632 | GGGGATGAAGGAAATATGCCC | 58.470 | 52.381 | 0.00 | 0.00 | 43.76 | 5.36 |
117 | 118 | 2.893489 | GTGGGGATGAAGGAAATATGCC | 59.107 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
118 | 119 | 2.893489 | GGTGGGGATGAAGGAAATATGC | 59.107 | 50.000 | 0.00 | 0.00 | 0.00 | 3.14 |
119 | 120 | 3.140895 | AGGGTGGGGATGAAGGAAATATG | 59.859 | 47.826 | 0.00 | 0.00 | 0.00 | 1.78 |
120 | 121 | 3.140895 | CAGGGTGGGGATGAAGGAAATAT | 59.859 | 47.826 | 0.00 | 0.00 | 0.00 | 1.28 |
121 | 122 | 2.513738 | CAGGGTGGGGATGAAGGAAATA | 59.486 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
122 | 123 | 1.288932 | CAGGGTGGGGATGAAGGAAAT | 59.711 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
123 | 124 | 0.704076 | CAGGGTGGGGATGAAGGAAA | 59.296 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
124 | 125 | 0.178846 | TCAGGGTGGGGATGAAGGAA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
125 | 126 | 0.046242 | ATCAGGGTGGGGATGAAGGA | 59.954 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
126 | 127 | 0.929244 | AATCAGGGTGGGGATGAAGG | 59.071 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
127 | 128 | 2.762327 | CAAAATCAGGGTGGGGATGAAG | 59.238 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
128 | 129 | 2.559478 | CCAAAATCAGGGTGGGGATGAA | 60.559 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
129 | 130 | 1.006998 | CCAAAATCAGGGTGGGGATGA | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
130 | 131 | 1.006998 | TCCAAAATCAGGGTGGGGATG | 59.993 | 52.381 | 0.00 | 0.00 | 32.95 | 3.51 |
131 | 132 | 1.007118 | GTCCAAAATCAGGGTGGGGAT | 59.993 | 52.381 | 0.00 | 0.00 | 32.95 | 3.85 |
137 | 138 | 1.519408 | CGTTCGTCCAAAATCAGGGT | 58.481 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
168 | 169 | 4.112059 | AATTTGTCAAATTTGCCTCCGGC | 61.112 | 43.478 | 16.26 | 0.00 | 40.26 | 6.13 |
169 | 170 | 2.810439 | TTTGTCAAATTTGCCTCCGG | 57.190 | 45.000 | 13.54 | 0.00 | 0.00 | 5.14 |
190 | 191 | 9.389755 | TGTGATTTGATTTCGATTATAGGTCAA | 57.610 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
191 | 192 | 8.956533 | TGTGATTTGATTTCGATTATAGGTCA | 57.043 | 30.769 | 0.00 | 0.00 | 0.00 | 4.02 |
192 | 193 | 9.261180 | TCTGTGATTTGATTTCGATTATAGGTC | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
193 | 194 | 9.613428 | TTCTGTGATTTGATTTCGATTATAGGT | 57.387 | 29.630 | 0.00 | 0.00 | 0.00 | 3.08 |
198 | 199 | 9.773328 | GTTCATTCTGTGATTTGATTTCGATTA | 57.227 | 29.630 | 0.00 | 0.00 | 36.54 | 1.75 |
199 | 200 | 8.517878 | AGTTCATTCTGTGATTTGATTTCGATT | 58.482 | 29.630 | 0.00 | 0.00 | 36.54 | 3.34 |
200 | 201 | 7.966753 | CAGTTCATTCTGTGATTTGATTTCGAT | 59.033 | 33.333 | 0.00 | 0.00 | 36.54 | 3.59 |
201 | 202 | 7.300320 | CAGTTCATTCTGTGATTTGATTTCGA | 58.700 | 34.615 | 0.00 | 0.00 | 36.54 | 3.71 |
202 | 203 | 6.525628 | CCAGTTCATTCTGTGATTTGATTTCG | 59.474 | 38.462 | 0.00 | 0.00 | 36.54 | 3.46 |
203 | 204 | 7.373493 | ACCAGTTCATTCTGTGATTTGATTTC | 58.627 | 34.615 | 0.00 | 0.00 | 36.54 | 2.17 |
204 | 205 | 7.294017 | ACCAGTTCATTCTGTGATTTGATTT | 57.706 | 32.000 | 0.00 | 0.00 | 36.54 | 2.17 |
205 | 206 | 6.906157 | ACCAGTTCATTCTGTGATTTGATT | 57.094 | 33.333 | 0.00 | 0.00 | 36.54 | 2.57 |
206 | 207 | 6.684686 | CAACCAGTTCATTCTGTGATTTGAT | 58.315 | 36.000 | 0.00 | 0.00 | 36.54 | 2.57 |
207 | 208 | 5.507817 | GCAACCAGTTCATTCTGTGATTTGA | 60.508 | 40.000 | 0.00 | 0.00 | 36.54 | 2.69 |
208 | 209 | 4.682860 | GCAACCAGTTCATTCTGTGATTTG | 59.317 | 41.667 | 0.00 | 0.00 | 36.54 | 2.32 |
209 | 210 | 4.557296 | CGCAACCAGTTCATTCTGTGATTT | 60.557 | 41.667 | 0.00 | 0.00 | 36.54 | 2.17 |
210 | 211 | 3.058016 | CGCAACCAGTTCATTCTGTGATT | 60.058 | 43.478 | 0.00 | 0.00 | 36.54 | 2.57 |
211 | 212 | 2.485426 | CGCAACCAGTTCATTCTGTGAT | 59.515 | 45.455 | 0.00 | 0.00 | 36.54 | 3.06 |
212 | 213 | 1.872952 | CGCAACCAGTTCATTCTGTGA | 59.127 | 47.619 | 0.00 | 0.00 | 34.02 | 3.58 |
213 | 214 | 1.872952 | TCGCAACCAGTTCATTCTGTG | 59.127 | 47.619 | 0.00 | 0.00 | 34.02 | 3.66 |
214 | 215 | 2.254546 | TCGCAACCAGTTCATTCTGT | 57.745 | 45.000 | 0.00 | 0.00 | 34.02 | 3.41 |
215 | 216 | 3.003689 | AGTTTCGCAACCAGTTCATTCTG | 59.996 | 43.478 | 0.00 | 0.00 | 32.70 | 3.02 |
216 | 217 | 3.214328 | AGTTTCGCAACCAGTTCATTCT | 58.786 | 40.909 | 0.00 | 0.00 | 32.70 | 2.40 |
217 | 218 | 3.626028 | AGTTTCGCAACCAGTTCATTC | 57.374 | 42.857 | 0.00 | 0.00 | 32.70 | 2.67 |
218 | 219 | 5.705609 | AATAGTTTCGCAACCAGTTCATT | 57.294 | 34.783 | 0.00 | 0.00 | 32.70 | 2.57 |
219 | 220 | 5.240623 | TGAAATAGTTTCGCAACCAGTTCAT | 59.759 | 36.000 | 5.34 | 0.00 | 42.55 | 2.57 |
220 | 221 | 4.576873 | TGAAATAGTTTCGCAACCAGTTCA | 59.423 | 37.500 | 5.34 | 5.34 | 42.55 | 3.18 |
221 | 222 | 4.909880 | GTGAAATAGTTTCGCAACCAGTTC | 59.090 | 41.667 | 10.21 | 0.41 | 46.56 | 3.01 |
222 | 223 | 4.855531 | GTGAAATAGTTTCGCAACCAGTT | 58.144 | 39.130 | 10.21 | 0.00 | 46.56 | 3.16 |
223 | 224 | 4.483476 | GTGAAATAGTTTCGCAACCAGT | 57.517 | 40.909 | 10.21 | 0.00 | 46.56 | 4.00 |
231 | 232 | 3.933332 | GTCAGGGGAGTGAAATAGTTTCG | 59.067 | 47.826 | 0.00 | 0.00 | 42.55 | 3.46 |
232 | 233 | 4.262617 | GGTCAGGGGAGTGAAATAGTTTC | 58.737 | 47.826 | 0.00 | 0.00 | 40.08 | 2.78 |
233 | 234 | 3.010250 | GGGTCAGGGGAGTGAAATAGTTT | 59.990 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
234 | 235 | 2.576648 | GGGTCAGGGGAGTGAAATAGTT | 59.423 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
235 | 236 | 2.197465 | GGGTCAGGGGAGTGAAATAGT | 58.803 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
236 | 237 | 2.482494 | AGGGTCAGGGGAGTGAAATAG | 58.518 | 52.381 | 0.00 | 0.00 | 0.00 | 1.73 |
237 | 238 | 2.661176 | AGGGTCAGGGGAGTGAAATA | 57.339 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
238 | 239 | 1.760405 | AAGGGTCAGGGGAGTGAAAT | 58.240 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
239 | 240 | 1.529744 | AAAGGGTCAGGGGAGTGAAA | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
240 | 241 | 1.144913 | CAAAAGGGTCAGGGGAGTGAA | 59.855 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
241 | 242 | 0.771127 | CAAAAGGGTCAGGGGAGTGA | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
242 | 243 | 0.478507 | ACAAAAGGGTCAGGGGAGTG | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
243 | 244 | 0.478507 | CACAAAAGGGTCAGGGGAGT | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
244 | 245 | 0.478507 | ACACAAAAGGGTCAGGGGAG | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
245 | 246 | 1.702957 | CTACACAAAAGGGTCAGGGGA | 59.297 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
246 | 247 | 1.886655 | GCTACACAAAAGGGTCAGGGG | 60.887 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
247 | 248 | 1.534729 | GCTACACAAAAGGGTCAGGG | 58.465 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
248 | 249 | 1.156736 | CGCTACACAAAAGGGTCAGG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
249 | 250 | 0.517316 | GCGCTACACAAAAGGGTCAG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
250 | 251 | 0.887387 | GGCGCTACACAAAAGGGTCA | 60.887 | 55.000 | 7.64 | 0.00 | 32.25 | 4.02 |
251 | 252 | 1.583495 | GGGCGCTACACAAAAGGGTC | 61.583 | 60.000 | 7.64 | 0.00 | 0.00 | 4.46 |
252 | 253 | 1.602605 | GGGCGCTACACAAAAGGGT | 60.603 | 57.895 | 7.64 | 0.00 | 0.00 | 4.34 |
253 | 254 | 1.586154 | CTGGGCGCTACACAAAAGGG | 61.586 | 60.000 | 7.64 | 0.00 | 0.00 | 3.95 |
254 | 255 | 1.586154 | CCTGGGCGCTACACAAAAGG | 61.586 | 60.000 | 7.64 | 0.42 | 0.00 | 3.11 |
255 | 256 | 1.875963 | CCTGGGCGCTACACAAAAG | 59.124 | 57.895 | 7.64 | 0.00 | 0.00 | 2.27 |
256 | 257 | 2.265182 | GCCTGGGCGCTACACAAAA | 61.265 | 57.895 | 7.64 | 0.00 | 0.00 | 2.44 |
257 | 258 | 2.671619 | GCCTGGGCGCTACACAAA | 60.672 | 61.111 | 7.64 | 0.00 | 0.00 | 2.83 |
268 | 269 | 4.087892 | ACTAGTGCAGCGCCTGGG | 62.088 | 66.667 | 2.29 | 0.00 | 31.21 | 4.45 |
269 | 270 | 2.816958 | CACTAGTGCAGCGCCTGG | 60.817 | 66.667 | 10.54 | 0.00 | 31.21 | 4.45 |
279 | 280 | 0.602638 | TTCTGGGCGTTGCACTAGTG | 60.603 | 55.000 | 18.93 | 18.93 | 30.56 | 2.74 |
280 | 281 | 0.320771 | CTTCTGGGCGTTGCACTAGT | 60.321 | 55.000 | 0.00 | 0.00 | 30.56 | 2.57 |
281 | 282 | 1.639298 | GCTTCTGGGCGTTGCACTAG | 61.639 | 60.000 | 0.00 | 0.00 | 30.56 | 2.57 |
282 | 283 | 1.671054 | GCTTCTGGGCGTTGCACTA | 60.671 | 57.895 | 0.00 | 0.00 | 30.56 | 2.74 |
283 | 284 | 2.111999 | TAGCTTCTGGGCGTTGCACT | 62.112 | 55.000 | 0.00 | 0.00 | 37.29 | 4.40 |
284 | 285 | 1.639298 | CTAGCTTCTGGGCGTTGCAC | 61.639 | 60.000 | 0.00 | 0.00 | 37.29 | 4.57 |
285 | 286 | 1.375908 | CTAGCTTCTGGGCGTTGCA | 60.376 | 57.895 | 0.00 | 0.00 | 37.29 | 4.08 |
286 | 287 | 2.109126 | CCTAGCTTCTGGGCGTTGC | 61.109 | 63.158 | 0.00 | 0.00 | 37.29 | 4.17 |
287 | 288 | 4.208632 | CCTAGCTTCTGGGCGTTG | 57.791 | 61.111 | 0.00 | 0.00 | 37.29 | 4.10 |
300 | 301 | 4.409342 | CACTAGTGCAGCGCCTAG | 57.591 | 61.111 | 10.54 | 14.52 | 36.35 | 3.02 |
310 | 311 | 2.034879 | CCTGGGCGTTGCACTAGTG | 61.035 | 63.158 | 18.93 | 18.93 | 30.56 | 2.74 |
311 | 312 | 2.172483 | CTCCTGGGCGTTGCACTAGT | 62.172 | 60.000 | 0.00 | 0.00 | 30.56 | 2.57 |
312 | 313 | 1.448540 | CTCCTGGGCGTTGCACTAG | 60.449 | 63.158 | 0.00 | 0.00 | 30.56 | 2.57 |
313 | 314 | 2.662596 | CTCCTGGGCGTTGCACTA | 59.337 | 61.111 | 0.00 | 0.00 | 30.56 | 2.74 |
315 | 316 | 3.605749 | TAGCTCCTGGGCGTTGCAC | 62.606 | 63.158 | 0.00 | 0.00 | 37.29 | 4.57 |
316 | 317 | 3.315142 | CTAGCTCCTGGGCGTTGCA | 62.315 | 63.158 | 0.00 | 0.00 | 37.29 | 4.08 |
317 | 318 | 2.512515 | CTAGCTCCTGGGCGTTGC | 60.513 | 66.667 | 0.00 | 0.00 | 37.29 | 4.17 |
318 | 319 | 2.187946 | CCTAGCTCCTGGGCGTTG | 59.812 | 66.667 | 0.00 | 0.00 | 37.29 | 4.10 |
331 | 332 | 0.803768 | CTACACAGTGCAGCGCCTAG | 60.804 | 60.000 | 2.29 | 0.00 | 0.00 | 3.02 |
332 | 333 | 1.215382 | CTACACAGTGCAGCGCCTA | 59.785 | 57.895 | 2.29 | 0.00 | 0.00 | 3.93 |
333 | 334 | 2.047844 | CTACACAGTGCAGCGCCT | 60.048 | 61.111 | 2.29 | 0.00 | 0.00 | 5.52 |
334 | 335 | 2.357517 | ACTACACAGTGCAGCGCC | 60.358 | 61.111 | 2.29 | 0.00 | 32.25 | 6.53 |
335 | 336 | 2.856032 | CACTACACAGTGCAGCGC | 59.144 | 61.111 | 0.00 | 0.00 | 45.44 | 5.92 |
342 | 343 | 1.183030 | TAGGCGCCACACTACACAGT | 61.183 | 55.000 | 31.54 | 5.27 | 34.42 | 3.55 |
343 | 344 | 0.458543 | CTAGGCGCCACACTACACAG | 60.459 | 60.000 | 31.54 | 6.91 | 0.00 | 3.66 |
344 | 345 | 1.589630 | CTAGGCGCCACACTACACA | 59.410 | 57.895 | 31.54 | 0.33 | 0.00 | 3.72 |
345 | 346 | 1.810030 | GCTAGGCGCCACACTACAC | 60.810 | 63.158 | 31.54 | 4.76 | 0.00 | 2.90 |
346 | 347 | 1.945354 | GAGCTAGGCGCCACACTACA | 61.945 | 60.000 | 31.54 | 2.99 | 40.39 | 2.74 |
347 | 348 | 1.227002 | GAGCTAGGCGCCACACTAC | 60.227 | 63.158 | 31.54 | 11.53 | 40.39 | 2.73 |
348 | 349 | 1.379977 | AGAGCTAGGCGCCACACTA | 60.380 | 57.895 | 31.54 | 11.42 | 40.39 | 2.74 |
349 | 350 | 2.681778 | AGAGCTAGGCGCCACACT | 60.682 | 61.111 | 31.54 | 21.99 | 40.39 | 3.55 |
350 | 351 | 2.202810 | GAGAGCTAGGCGCCACAC | 60.203 | 66.667 | 31.54 | 17.11 | 40.39 | 3.82 |
351 | 352 | 2.679996 | TGAGAGCTAGGCGCCACA | 60.680 | 61.111 | 31.54 | 15.42 | 40.39 | 4.17 |
352 | 353 | 2.105930 | CTGAGAGCTAGGCGCCAC | 59.894 | 66.667 | 31.54 | 17.93 | 40.39 | 5.01 |
353 | 354 | 3.150335 | CCTGAGAGCTAGGCGCCA | 61.150 | 66.667 | 31.54 | 14.00 | 40.39 | 5.69 |
373 | 374 | 3.730761 | GGCCAAGTCAGCGTGCAG | 61.731 | 66.667 | 0.00 | 0.00 | 0.00 | 4.41 |
374 | 375 | 4.560743 | TGGCCAAGTCAGCGTGCA | 62.561 | 61.111 | 0.61 | 0.00 | 0.00 | 4.57 |
375 | 376 | 4.030452 | GTGGCCAAGTCAGCGTGC | 62.030 | 66.667 | 7.24 | 0.00 | 0.00 | 5.34 |
376 | 377 | 0.673333 | TATGTGGCCAAGTCAGCGTG | 60.673 | 55.000 | 7.24 | 0.00 | 0.00 | 5.34 |
377 | 378 | 0.253044 | ATATGTGGCCAAGTCAGCGT | 59.747 | 50.000 | 7.24 | 0.00 | 0.00 | 5.07 |
378 | 379 | 0.659427 | CATATGTGGCCAAGTCAGCG | 59.341 | 55.000 | 7.24 | 0.00 | 0.00 | 5.18 |
379 | 380 | 1.027357 | CCATATGTGGCCAAGTCAGC | 58.973 | 55.000 | 7.24 | 0.00 | 39.01 | 4.26 |
380 | 381 | 1.064463 | ACCCATATGTGGCCAAGTCAG | 60.064 | 52.381 | 7.24 | 0.00 | 44.62 | 3.51 |
381 | 382 | 0.998928 | ACCCATATGTGGCCAAGTCA | 59.001 | 50.000 | 7.24 | 0.57 | 44.62 | 3.41 |
382 | 383 | 1.392589 | CACCCATATGTGGCCAAGTC | 58.607 | 55.000 | 7.24 | 0.00 | 44.62 | 3.01 |
383 | 384 | 0.684153 | GCACCCATATGTGGCCAAGT | 60.684 | 55.000 | 7.24 | 0.54 | 44.62 | 3.16 |
384 | 385 | 1.727511 | CGCACCCATATGTGGCCAAG | 61.728 | 60.000 | 7.24 | 0.00 | 44.62 | 3.61 |
385 | 386 | 1.752310 | CGCACCCATATGTGGCCAA | 60.752 | 57.895 | 7.24 | 0.00 | 44.62 | 4.52 |
386 | 387 | 2.124362 | CGCACCCATATGTGGCCA | 60.124 | 61.111 | 0.00 | 0.00 | 44.62 | 5.36 |
387 | 388 | 2.186826 | GTCGCACCCATATGTGGCC | 61.187 | 63.158 | 2.26 | 0.00 | 44.62 | 5.36 |
388 | 389 | 2.534019 | CGTCGCACCCATATGTGGC | 61.534 | 63.158 | 2.26 | 1.44 | 44.62 | 5.01 |
389 | 390 | 2.534019 | GCGTCGCACCCATATGTGG | 61.534 | 63.158 | 13.44 | 0.51 | 45.61 | 4.17 |
390 | 391 | 1.521457 | AGCGTCGCACCCATATGTG | 60.521 | 57.895 | 21.09 | 0.00 | 39.29 | 3.21 |
391 | 392 | 1.521457 | CAGCGTCGCACCCATATGT | 60.521 | 57.895 | 21.09 | 0.00 | 0.00 | 2.29 |
392 | 393 | 2.246739 | CCAGCGTCGCACCCATATG | 61.247 | 63.158 | 21.09 | 6.70 | 0.00 | 1.78 |
393 | 394 | 2.108976 | CCAGCGTCGCACCCATAT | 59.891 | 61.111 | 21.09 | 0.00 | 0.00 | 1.78 |
394 | 395 | 4.830765 | GCCAGCGTCGCACCCATA | 62.831 | 66.667 | 21.09 | 0.00 | 0.00 | 2.74 |
411 | 412 | 1.007271 | CCAGATAGGCGCTACACGG | 60.007 | 63.158 | 7.64 | 0.00 | 43.93 | 4.94 |
413 | 414 | 0.315568 | CTCCCAGATAGGCGCTACAC | 59.684 | 60.000 | 7.64 | 0.00 | 35.39 | 2.90 |
414 | 415 | 0.827925 | CCTCCCAGATAGGCGCTACA | 60.828 | 60.000 | 7.64 | 0.00 | 35.39 | 2.74 |
415 | 416 | 1.968310 | CCTCCCAGATAGGCGCTAC | 59.032 | 63.158 | 7.64 | 0.00 | 35.39 | 3.58 |
416 | 417 | 4.521559 | CCTCCCAGATAGGCGCTA | 57.478 | 61.111 | 7.64 | 0.00 | 35.39 | 4.26 |
421 | 422 | 1.227674 | GCAACGCCTCCCAGATAGG | 60.228 | 63.158 | 0.00 | 0.00 | 37.17 | 2.57 |
422 | 423 | 0.107456 | ATGCAACGCCTCCCAGATAG | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 2.08 |
423 | 424 | 1.344438 | CTATGCAACGCCTCCCAGATA | 59.656 | 52.381 | 0.00 | 0.00 | 0.00 | 1.98 |
424 | 425 | 0.107456 | CTATGCAACGCCTCCCAGAT | 59.893 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
425 | 426 | 0.975556 | TCTATGCAACGCCTCCCAGA | 60.976 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
426 | 427 | 0.531532 | CTCTATGCAACGCCTCCCAG | 60.532 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
427 | 428 | 1.522092 | CTCTATGCAACGCCTCCCA | 59.478 | 57.895 | 0.00 | 0.00 | 0.00 | 4.37 |
428 | 429 | 1.227674 | CCTCTATGCAACGCCTCCC | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
429 | 430 | 1.227674 | CCCTCTATGCAACGCCTCC | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
430 | 431 | 0.811616 | CACCCTCTATGCAACGCCTC | 60.812 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
431 | 432 | 1.221840 | CACCCTCTATGCAACGCCT | 59.778 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
432 | 433 | 1.078426 | ACACCCTCTATGCAACGCC | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
433 | 434 | 1.369091 | CCACACCCTCTATGCAACGC | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 4.84 |
434 | 435 | 1.369091 | GCCACACCCTCTATGCAACG | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 4.10 |
435 | 436 | 1.369091 | CGCCACACCCTCTATGCAAC | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
436 | 437 | 1.078497 | CGCCACACCCTCTATGCAA | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 4.08 |
437 | 438 | 2.584064 | CGCCACACCCTCTATGCA | 59.416 | 61.111 | 0.00 | 0.00 | 0.00 | 3.96 |
438 | 439 | 2.897350 | GCGCCACACCCTCTATGC | 60.897 | 66.667 | 0.00 | 0.00 | 0.00 | 3.14 |
439 | 440 | 2.203070 | GGCGCCACACCCTCTATG | 60.203 | 66.667 | 24.80 | 0.00 | 0.00 | 2.23 |
440 | 441 | 3.849951 | CGGCGCCACACCCTCTAT | 61.850 | 66.667 | 28.98 | 0.00 | 0.00 | 1.98 |
461 | 462 | 4.627801 | TTTGTGTAGCGCCCGCCA | 62.628 | 61.111 | 2.29 | 0.00 | 43.17 | 5.69 |
462 | 463 | 3.322706 | CTTTTGTGTAGCGCCCGCC | 62.323 | 63.158 | 2.29 | 0.00 | 43.17 | 6.13 |
463 | 464 | 2.175811 | CTTTTGTGTAGCGCCCGC | 59.824 | 61.111 | 2.29 | 4.20 | 42.33 | 6.13 |
464 | 465 | 2.686816 | CCCTTTTGTGTAGCGCCCG | 61.687 | 63.158 | 2.29 | 0.00 | 0.00 | 6.13 |
465 | 466 | 1.583495 | GACCCTTTTGTGTAGCGCCC | 61.583 | 60.000 | 2.29 | 0.00 | 0.00 | 6.13 |
466 | 467 | 0.887387 | TGACCCTTTTGTGTAGCGCC | 60.887 | 55.000 | 2.29 | 0.00 | 0.00 | 6.53 |
467 | 468 | 0.517316 | CTGACCCTTTTGTGTAGCGC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 5.92 |
468 | 469 | 1.156736 | CCTGACCCTTTTGTGTAGCG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
469 | 470 | 1.534729 | CCCTGACCCTTTTGTGTAGC | 58.465 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
470 | 471 | 1.702957 | TCCCCTGACCCTTTTGTGTAG | 59.297 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
471 | 472 | 1.702957 | CTCCCCTGACCCTTTTGTGTA | 59.297 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
472 | 473 | 0.478507 | CTCCCCTGACCCTTTTGTGT | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
473 | 474 | 0.478507 | ACTCCCCTGACCCTTTTGTG | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
474 | 475 | 0.478507 | CACTCCCCTGACCCTTTTGT | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
475 | 476 | 0.771127 | TCACTCCCCTGACCCTTTTG | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
476 | 477 | 1.529744 | TTCACTCCCCTGACCCTTTT | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 2.27 |
477 | 478 | 1.529744 | TTTCACTCCCCTGACCCTTT | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
478 | 479 | 1.760405 | ATTTCACTCCCCTGACCCTT | 58.240 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
479 | 480 | 2.225908 | ACTATTTCACTCCCCTGACCCT | 60.226 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
480 | 481 | 2.197465 | ACTATTTCACTCCCCTGACCC | 58.803 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
481 | 482 | 4.262617 | GAAACTATTTCACTCCCCTGACC | 58.737 | 47.826 | 0.00 | 0.00 | 39.45 | 4.02 |
482 | 483 | 3.933332 | CGAAACTATTTCACTCCCCTGAC | 59.067 | 47.826 | 2.50 | 0.00 | 39.63 | 3.51 |
483 | 484 | 3.618997 | GCGAAACTATTTCACTCCCCTGA | 60.619 | 47.826 | 2.50 | 0.00 | 39.63 | 3.86 |
484 | 485 | 2.678336 | GCGAAACTATTTCACTCCCCTG | 59.322 | 50.000 | 2.50 | 0.00 | 39.63 | 4.45 |
485 | 486 | 2.304761 | TGCGAAACTATTTCACTCCCCT | 59.695 | 45.455 | 2.50 | 0.00 | 39.63 | 4.79 |
486 | 487 | 2.706890 | TGCGAAACTATTTCACTCCCC | 58.293 | 47.619 | 2.50 | 0.00 | 39.63 | 4.81 |
487 | 488 | 3.119955 | GGTTGCGAAACTATTTCACTCCC | 60.120 | 47.826 | 6.17 | 0.00 | 39.63 | 4.30 |
488 | 489 | 3.500680 | TGGTTGCGAAACTATTTCACTCC | 59.499 | 43.478 | 6.17 | 1.39 | 39.63 | 3.85 |
489 | 490 | 4.213482 | ACTGGTTGCGAAACTATTTCACTC | 59.787 | 41.667 | 6.17 | 0.00 | 39.63 | 3.51 |
490 | 491 | 4.134563 | ACTGGTTGCGAAACTATTTCACT | 58.865 | 39.130 | 6.17 | 0.00 | 39.63 | 3.41 |
491 | 492 | 4.483476 | ACTGGTTGCGAAACTATTTCAC | 57.517 | 40.909 | 6.17 | 0.00 | 39.63 | 3.18 |
492 | 493 | 4.576873 | TGAACTGGTTGCGAAACTATTTCA | 59.423 | 37.500 | 17.86 | 17.86 | 39.63 | 2.69 |
493 | 494 | 5.103290 | TGAACTGGTTGCGAAACTATTTC | 57.897 | 39.130 | 13.74 | 13.74 | 36.32 | 2.17 |
494 | 495 | 5.705609 | ATGAACTGGTTGCGAAACTATTT | 57.294 | 34.783 | 6.17 | 0.00 | 0.00 | 1.40 |
495 | 496 | 5.473504 | AGAATGAACTGGTTGCGAAACTATT | 59.526 | 36.000 | 6.17 | 0.00 | 0.00 | 1.73 |
496 | 497 | 5.003804 | AGAATGAACTGGTTGCGAAACTAT | 58.996 | 37.500 | 6.17 | 0.00 | 0.00 | 2.12 |
497 | 498 | 4.213270 | CAGAATGAACTGGTTGCGAAACTA | 59.787 | 41.667 | 6.17 | 0.00 | 39.69 | 2.24 |
498 | 499 | 3.003689 | CAGAATGAACTGGTTGCGAAACT | 59.996 | 43.478 | 6.17 | 0.00 | 39.69 | 2.66 |
499 | 500 | 3.243068 | ACAGAATGAACTGGTTGCGAAAC | 60.243 | 43.478 | 0.00 | 0.00 | 39.69 | 2.78 |
500 | 501 | 2.948979 | ACAGAATGAACTGGTTGCGAAA | 59.051 | 40.909 | 0.00 | 0.00 | 39.69 | 3.46 |
501 | 502 | 2.290367 | CACAGAATGAACTGGTTGCGAA | 59.710 | 45.455 | 0.00 | 0.00 | 39.69 | 4.70 |
502 | 503 | 1.872952 | CACAGAATGAACTGGTTGCGA | 59.127 | 47.619 | 0.00 | 0.00 | 39.69 | 5.10 |
503 | 504 | 1.872952 | TCACAGAATGAACTGGTTGCG | 59.127 | 47.619 | 0.00 | 0.00 | 39.69 | 4.85 |
504 | 505 | 4.510038 | AATCACAGAATGAACTGGTTGC | 57.490 | 40.909 | 0.00 | 0.00 | 41.93 | 4.17 |
505 | 506 | 6.075762 | TCAAATCACAGAATGAACTGGTTG | 57.924 | 37.500 | 0.00 | 0.00 | 41.93 | 3.77 |
506 | 507 | 6.906157 | ATCAAATCACAGAATGAACTGGTT | 57.094 | 33.333 | 0.00 | 0.00 | 41.93 | 3.67 |
507 | 508 | 6.906157 | AATCAAATCACAGAATGAACTGGT | 57.094 | 33.333 | 0.00 | 0.00 | 41.93 | 4.00 |
508 | 509 | 6.525628 | CGAAATCAAATCACAGAATGAACTGG | 59.474 | 38.462 | 0.00 | 0.00 | 41.93 | 4.00 |
509 | 510 | 7.300320 | TCGAAATCAAATCACAGAATGAACTG | 58.700 | 34.615 | 0.00 | 0.00 | 41.93 | 3.16 |
510 | 511 | 7.439157 | TCGAAATCAAATCACAGAATGAACT | 57.561 | 32.000 | 0.00 | 0.00 | 41.93 | 3.01 |
511 | 512 | 8.679288 | AATCGAAATCAAATCACAGAATGAAC | 57.321 | 30.769 | 0.00 | 0.00 | 41.93 | 3.18 |
516 | 517 | 9.613428 | ACCTATAATCGAAATCAAATCACAGAA | 57.387 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
517 | 518 | 9.261180 | GACCTATAATCGAAATCAAATCACAGA | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
518 | 519 | 9.045223 | TGACCTATAATCGAAATCAAATCACAG | 57.955 | 33.333 | 0.00 | 0.00 | 0.00 | 3.66 |
519 | 520 | 8.956533 | TGACCTATAATCGAAATCAAATCACA | 57.043 | 30.769 | 0.00 | 0.00 | 0.00 | 3.58 |
535 | 536 | 9.213799 | GGCAAATTTGACAATTTTGACCTATAA | 57.786 | 29.630 | 27.56 | 0.00 | 40.09 | 0.98 |
536 | 537 | 7.821846 | GGGCAAATTTGACAATTTTGACCTATA | 59.178 | 33.333 | 33.72 | 2.51 | 40.09 | 1.31 |
537 | 538 | 6.654582 | GGGCAAATTTGACAATTTTGACCTAT | 59.345 | 34.615 | 33.72 | 5.55 | 40.09 | 2.57 |
538 | 539 | 5.994668 | GGGCAAATTTGACAATTTTGACCTA | 59.005 | 36.000 | 33.72 | 3.60 | 40.09 | 3.08 |
539 | 540 | 4.821260 | GGGCAAATTTGACAATTTTGACCT | 59.179 | 37.500 | 33.72 | 5.89 | 40.09 | 3.85 |
540 | 541 | 4.023279 | GGGGCAAATTTGACAATTTTGACC | 60.023 | 41.667 | 33.51 | 33.51 | 40.09 | 4.02 |
541 | 542 | 4.821260 | AGGGGCAAATTTGACAATTTTGAC | 59.179 | 37.500 | 27.56 | 25.82 | 40.09 | 3.18 |
542 | 543 | 4.820716 | CAGGGGCAAATTTGACAATTTTGA | 59.179 | 37.500 | 27.56 | 0.07 | 40.09 | 2.69 |
543 | 544 | 4.557097 | GCAGGGGCAAATTTGACAATTTTG | 60.557 | 41.667 | 25.05 | 22.48 | 40.09 | 2.44 |
544 | 545 | 3.569277 | GCAGGGGCAAATTTGACAATTTT | 59.431 | 39.130 | 25.05 | 3.05 | 40.09 | 1.82 |
545 | 546 | 3.148412 | GCAGGGGCAAATTTGACAATTT | 58.852 | 40.909 | 25.05 | 4.81 | 42.37 | 1.82 |
546 | 547 | 2.552809 | GGCAGGGGCAAATTTGACAATT | 60.553 | 45.455 | 25.05 | 7.31 | 43.71 | 2.32 |
547 | 548 | 1.003464 | GGCAGGGGCAAATTTGACAAT | 59.997 | 47.619 | 25.05 | 10.22 | 43.71 | 2.71 |
548 | 549 | 0.396060 | GGCAGGGGCAAATTTGACAA | 59.604 | 50.000 | 25.05 | 0.00 | 43.71 | 3.18 |
549 | 550 | 1.814772 | CGGCAGGGGCAAATTTGACA | 61.815 | 55.000 | 25.05 | 0.00 | 43.71 | 3.58 |
550 | 551 | 1.079888 | CGGCAGGGGCAAATTTGAC | 60.080 | 57.895 | 22.31 | 19.34 | 43.71 | 3.18 |
551 | 552 | 2.282039 | CCGGCAGGGGCAAATTTGA | 61.282 | 57.895 | 22.31 | 0.00 | 43.71 | 2.69 |
552 | 553 | 2.265424 | CCGGCAGGGGCAAATTTG | 59.735 | 61.111 | 14.03 | 14.03 | 43.71 | 2.32 |
553 | 554 | 2.119391 | TCCGGCAGGGGCAAATTT | 59.881 | 55.556 | 2.05 | 0.00 | 43.71 | 1.82 |
554 | 555 | 2.679996 | GTCCGGCAGGGGCAAATT | 60.680 | 61.111 | 2.05 | 0.00 | 41.38 | 1.82 |
555 | 556 | 4.759205 | GGTCCGGCAGGGGCAAAT | 62.759 | 66.667 | 2.05 | 0.00 | 44.60 | 2.32 |
832 | 833 | 1.000486 | TGGGTCGAAGAGGAGGAGG | 60.000 | 63.158 | 0.00 | 0.00 | 36.95 | 4.30 |
1017 | 1018 | 6.648725 | CAGAAGAAAACAAGAACCTAGAGGAG | 59.351 | 42.308 | 1.60 | 0.00 | 38.94 | 3.69 |
1020 | 1021 | 5.180304 | GCCAGAAGAAAACAAGAACCTAGAG | 59.820 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
1023 | 1024 | 3.813166 | CGCCAGAAGAAAACAAGAACCTA | 59.187 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
1536 | 1537 | 1.456331 | CTTGGGCATGGGGATGGAC | 60.456 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
1631 | 1632 | 4.180057 | GTTCTGATAACTCAGCAGGACAG | 58.820 | 47.826 | 0.00 | 0.00 | 46.71 | 3.51 |
1773 | 1774 | 5.756195 | TTAAGCTTATGCCAATGCTACTG | 57.244 | 39.130 | 7.08 | 0.00 | 40.80 | 2.74 |
1792 | 1793 | 4.917385 | TGCATCAGCCTTACCTTCTTTAA | 58.083 | 39.130 | 0.00 | 0.00 | 41.13 | 1.52 |
1794 | 1795 | 3.350833 | CTGCATCAGCCTTACCTTCTTT | 58.649 | 45.455 | 0.00 | 0.00 | 41.13 | 2.52 |
1818 | 1819 | 4.276678 | TGCTTCACAAAGTCTTCAATCCTG | 59.723 | 41.667 | 0.00 | 0.00 | 34.79 | 3.86 |
1838 | 1839 | 2.035193 | CGCAGTAGGTCTGACATATGCT | 59.965 | 50.000 | 22.05 | 9.63 | 46.27 | 3.79 |
1875 | 1876 | 1.272490 | TCCTGTGTAAACTCCAGCTCG | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
2136 | 2137 | 1.282382 | TAGGCCTCCCAAACCTACAC | 58.718 | 55.000 | 9.68 | 0.00 | 34.92 | 2.90 |
2143 | 2144 | 1.431243 | ACCAAATGTAGGCCTCCCAAA | 59.569 | 47.619 | 9.68 | 0.00 | 0.00 | 3.28 |
2152 | 2153 | 9.177608 | TCAATTCTGAATAGAACCAAATGTAGG | 57.822 | 33.333 | 2.85 | 0.00 | 45.17 | 3.18 |
2207 | 2208 | 1.065410 | ACCATGTCCCCAGGTGACAA | 61.065 | 55.000 | 9.04 | 0.00 | 45.15 | 3.18 |
2407 | 2408 | 8.023021 | TGAATACCTCATAAGTAAGTGCATCT | 57.977 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
2605 | 2738 | 0.324552 | CCCATTTCATGCCCACTCCA | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2606 | 2739 | 1.044790 | CCCCATTTCATGCCCACTCC | 61.045 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2607 | 2740 | 0.033208 | TCCCCATTTCATGCCCACTC | 60.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2609 | 2742 | 1.274712 | TTTCCCCATTTCATGCCCAC | 58.725 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2610 | 2743 | 1.627834 | GTTTTCCCCATTTCATGCCCA | 59.372 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
2658 | 2795 | 4.450976 | GAACCCCAATTTTGCTGTTCTTT | 58.549 | 39.130 | 12.26 | 0.00 | 35.80 | 2.52 |
2661 | 2798 | 2.766313 | GGAACCCCAATTTTGCTGTTC | 58.234 | 47.619 | 11.58 | 11.58 | 36.89 | 3.18 |
2662 | 2799 | 2.928801 | GGAACCCCAATTTTGCTGTT | 57.071 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2820 | 2958 | 1.331756 | GCTACCACATCAATGGAAGCG | 59.668 | 52.381 | 0.00 | 0.00 | 43.02 | 4.68 |
3006 | 3144 | 3.493303 | GGAGGCCCCTGGATGACC | 61.493 | 72.222 | 0.00 | 0.00 | 0.00 | 4.02 |
3120 | 3258 | 5.830457 | TGACAACCTTTCAACCATGTTATCA | 59.170 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
3624 | 3762 | 5.595542 | TGAAGCCCTTTCCATCATAGATTTG | 59.404 | 40.000 | 0.00 | 0.00 | 34.77 | 2.32 |
3810 | 3948 | 6.042781 | ACCTGACACCTGAAACAGAAAGTATA | 59.957 | 38.462 | 0.00 | 0.00 | 32.44 | 1.47 |
3847 | 3985 | 5.707298 | CACAGACCCAGAAAACATAGACATT | 59.293 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3921 | 4059 | 2.828520 | TCCTGAGTGAAGTCCATGACTC | 59.171 | 50.000 | 0.00 | 0.00 | 42.59 | 3.36 |
3943 | 4081 | 4.761739 | TCTGAACTTTGCAATTAGACCCAG | 59.238 | 41.667 | 0.00 | 6.44 | 0.00 | 4.45 |
4033 | 4172 | 1.274416 | ACCAATGAGCTAGGGAAGGGA | 60.274 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
4039 | 4179 | 3.798202 | GTAGTGAACCAATGAGCTAGGG | 58.202 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4095 | 4235 | 8.839310 | ACTTGCTATAATCATAAGATCCACAC | 57.161 | 34.615 | 0.00 | 0.00 | 31.90 | 3.82 |
4099 | 4239 | 7.704472 | CCGAGACTTGCTATAATCATAAGATCC | 59.296 | 40.741 | 0.00 | 0.00 | 31.90 | 3.36 |
4106 | 4246 | 6.821388 | ACTTTCCGAGACTTGCTATAATCAT | 58.179 | 36.000 | 0.00 | 0.00 | 0.00 | 2.45 |
4107 | 4247 | 6.222038 | ACTTTCCGAGACTTGCTATAATCA | 57.778 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
4181 | 4332 | 9.880157 | GGAAACTGTGGTGAAATATACTAAGTA | 57.120 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
4182 | 4333 | 8.603304 | AGGAAACTGTGGTGAAATATACTAAGT | 58.397 | 33.333 | 0.00 | 0.00 | 41.13 | 2.24 |
4183 | 4334 | 9.449719 | AAGGAAACTGTGGTGAAATATACTAAG | 57.550 | 33.333 | 0.00 | 0.00 | 42.68 | 2.18 |
4243 | 4394 | 7.571080 | TGCTAATGATGCATCTAAAATGTGA | 57.429 | 32.000 | 26.32 | 4.16 | 35.31 | 3.58 |
4585 | 4745 | 6.093495 | GGCCAAATTTCCTTAAAAATGTAGGC | 59.907 | 38.462 | 0.00 | 11.25 | 38.53 | 3.93 |
4595 | 4755 | 3.702045 | CGGGTATGGCCAAATTTCCTTAA | 59.298 | 43.478 | 10.96 | 0.00 | 39.65 | 1.85 |
4730 | 5015 | 6.326583 | TCCTTTATCCGATGATAGTGAAACCT | 59.673 | 38.462 | 0.00 | 0.00 | 34.98 | 3.50 |
4779 | 5064 | 5.539048 | AGTTATGTCAGTCAGTGGTTGTAC | 58.461 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
4864 | 5150 | 9.507329 | ACTATGTATCCATGTCCATAACATTTC | 57.493 | 33.333 | 0.00 | 0.00 | 46.73 | 2.17 |
4872 | 5158 | 7.582242 | GCCTTGATACTATGTATCCATGTCCAT | 60.582 | 40.741 | 13.18 | 0.00 | 32.29 | 3.41 |
4962 | 5248 | 2.238898 | ACTTATTTTGGGACGGAGGGAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4963 | 5249 | 2.026636 | CACTTATTTTGGGACGGAGGGA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4964 | 5250 | 2.290705 | ACACTTATTTTGGGACGGAGGG | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4965 | 5251 | 3.007635 | GACACTTATTTTGGGACGGAGG | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4966 | 5252 | 3.939066 | AGACACTTATTTTGGGACGGAG | 58.061 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
4968 | 5254 | 4.069304 | TCAAGACACTTATTTTGGGACGG | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
4969 | 5255 | 4.083484 | GGTCAAGACACTTATTTTGGGACG | 60.083 | 45.833 | 2.29 | 0.00 | 0.00 | 4.79 |
4971 | 5257 | 5.319043 | AGGTCAAGACACTTATTTTGGGA | 57.681 | 39.130 | 2.29 | 0.00 | 0.00 | 4.37 |
4972 | 5258 | 6.715264 | ACTAAGGTCAAGACACTTATTTTGGG | 59.285 | 38.462 | 2.29 | 0.00 | 0.00 | 4.12 |
4973 | 5259 | 7.094762 | GGACTAAGGTCAAGACACTTATTTTGG | 60.095 | 40.741 | 2.29 | 0.05 | 43.77 | 3.28 |
4974 | 5260 | 7.444183 | TGGACTAAGGTCAAGACACTTATTTTG | 59.556 | 37.037 | 2.29 | 0.34 | 43.77 | 2.44 |
4976 | 5262 | 7.074653 | TGGACTAAGGTCAAGACACTTATTT | 57.925 | 36.000 | 2.29 | 0.00 | 43.77 | 1.40 |
4977 | 5263 | 6.270231 | ACTGGACTAAGGTCAAGACACTTATT | 59.730 | 38.462 | 7.45 | 2.76 | 44.24 | 1.40 |
4978 | 5264 | 5.780793 | ACTGGACTAAGGTCAAGACACTTAT | 59.219 | 40.000 | 7.45 | 0.20 | 44.24 | 1.73 |
4979 | 5265 | 5.145564 | ACTGGACTAAGGTCAAGACACTTA | 58.854 | 41.667 | 7.45 | 6.73 | 44.24 | 2.24 |
4980 | 5266 | 3.967987 | ACTGGACTAAGGTCAAGACACTT | 59.032 | 43.478 | 7.45 | 5.99 | 44.24 | 3.16 |
4981 | 5267 | 3.577919 | ACTGGACTAAGGTCAAGACACT | 58.422 | 45.455 | 7.45 | 0.00 | 44.24 | 3.55 |
4982 | 5268 | 4.058817 | CAACTGGACTAAGGTCAAGACAC | 58.941 | 47.826 | 7.45 | 0.00 | 44.24 | 3.67 |
4983 | 5269 | 3.709653 | ACAACTGGACTAAGGTCAAGACA | 59.290 | 43.478 | 7.45 | 0.00 | 44.24 | 3.41 |
4984 | 5270 | 4.338379 | ACAACTGGACTAAGGTCAAGAC | 57.662 | 45.455 | 7.45 | 0.00 | 44.24 | 3.01 |
4985 | 5271 | 7.093465 | CCTTATACAACTGGACTAAGGTCAAGA | 60.093 | 40.741 | 7.45 | 0.00 | 44.24 | 3.02 |
4986 | 5272 | 7.042335 | CCTTATACAACTGGACTAAGGTCAAG | 58.958 | 42.308 | 0.00 | 0.00 | 46.26 | 3.02 |
4987 | 5273 | 6.727231 | TCCTTATACAACTGGACTAAGGTCAA | 59.273 | 38.462 | 6.56 | 0.00 | 43.77 | 3.18 |
4988 | 5274 | 6.258354 | TCCTTATACAACTGGACTAAGGTCA | 58.742 | 40.000 | 6.56 | 0.00 | 43.77 | 4.02 |
4989 | 5275 | 6.786967 | TCCTTATACAACTGGACTAAGGTC | 57.213 | 41.667 | 6.56 | 0.00 | 39.51 | 3.85 |
4990 | 5276 | 7.456902 | TCTTTCCTTATACAACTGGACTAAGGT | 59.543 | 37.037 | 6.56 | 0.00 | 39.51 | 3.50 |
4991 | 5277 | 7.848128 | TCTTTCCTTATACAACTGGACTAAGG | 58.152 | 38.462 | 0.00 | 0.00 | 39.75 | 2.69 |
4992 | 5278 | 9.535878 | GATCTTTCCTTATACAACTGGACTAAG | 57.464 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
4993 | 5279 | 9.268282 | AGATCTTTCCTTATACAACTGGACTAA | 57.732 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
4994 | 5280 | 8.840200 | AGATCTTTCCTTATACAACTGGACTA | 57.160 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
5067 | 5373 | 6.409524 | TGATTGTTCTTTCTTGCCTCAAAT | 57.590 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
5079 | 5385 | 8.331740 | TGGGAGAGATTAGATTGATTGTTCTTT | 58.668 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
5175 | 5482 | 5.986135 | CCTTGATTCAGAACGGGATAACTAG | 59.014 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5247 | 5554 | 7.739444 | AGACAAATCTATGGGATGGAGGTAATA | 59.261 | 37.037 | 0.00 | 0.00 | 34.45 | 0.98 |
5248 | 5555 | 6.564152 | AGACAAATCTATGGGATGGAGGTAAT | 59.436 | 38.462 | 0.00 | 0.00 | 34.45 | 1.89 |
5249 | 5556 | 5.911178 | AGACAAATCTATGGGATGGAGGTAA | 59.089 | 40.000 | 0.00 | 0.00 | 34.45 | 2.85 |
5250 | 5557 | 5.476983 | AGACAAATCTATGGGATGGAGGTA | 58.523 | 41.667 | 0.00 | 0.00 | 34.45 | 3.08 |
5251 | 5558 | 4.310740 | AGACAAATCTATGGGATGGAGGT | 58.689 | 43.478 | 0.00 | 0.00 | 34.45 | 3.85 |
5252 | 5559 | 4.989875 | AGACAAATCTATGGGATGGAGG | 57.010 | 45.455 | 0.00 | 0.00 | 34.45 | 4.30 |
5253 | 5560 | 6.924913 | TCTAGACAAATCTATGGGATGGAG | 57.075 | 41.667 | 0.00 | 0.00 | 36.81 | 3.86 |
5254 | 5561 | 8.985922 | CATATCTAGACAAATCTATGGGATGGA | 58.014 | 37.037 | 0.00 | 0.00 | 36.81 | 3.41 |
5255 | 5562 | 8.209584 | CCATATCTAGACAAATCTATGGGATGG | 58.790 | 40.741 | 15.70 | 0.00 | 35.16 | 3.51 |
5256 | 5563 | 8.985922 | TCCATATCTAGACAAATCTATGGGATG | 58.014 | 37.037 | 20.34 | 3.60 | 37.71 | 3.51 |
5257 | 5564 | 9.741198 | ATCCATATCTAGACAAATCTATGGGAT | 57.259 | 33.333 | 20.34 | 13.09 | 37.71 | 3.85 |
5258 | 5565 | 8.985922 | CATCCATATCTAGACAAATCTATGGGA | 58.014 | 37.037 | 20.34 | 11.92 | 37.71 | 4.37 |
5259 | 5566 | 8.766476 | ACATCCATATCTAGACAAATCTATGGG | 58.234 | 37.037 | 20.34 | 12.09 | 37.71 | 4.00 |
5296 | 5603 | 9.968870 | GTCTTAGATTTTTCTAGATACGGATGT | 57.031 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
5297 | 5604 | 9.967346 | TGTCTTAGATTTTTCTAGATACGGATG | 57.033 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
5299 | 5606 | 9.404848 | TCTGTCTTAGATTTTTCTAGATACGGA | 57.595 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
5300 | 5607 | 9.672086 | CTCTGTCTTAGATTTTTCTAGATACGG | 57.328 | 37.037 | 0.00 | 0.00 | 34.21 | 4.02 |
5301 | 5608 | 9.672086 | CCTCTGTCTTAGATTTTTCTAGATACG | 57.328 | 37.037 | 0.00 | 0.00 | 34.21 | 3.06 |
5302 | 5609 | 9.974980 | CCCTCTGTCTTAGATTTTTCTAGATAC | 57.025 | 37.037 | 0.00 | 0.00 | 34.21 | 2.24 |
5303 | 5610 | 9.937876 | TCCCTCTGTCTTAGATTTTTCTAGATA | 57.062 | 33.333 | 0.00 | 0.00 | 34.21 | 1.98 |
5304 | 5611 | 8.846423 | TCCCTCTGTCTTAGATTTTTCTAGAT | 57.154 | 34.615 | 0.00 | 0.00 | 34.21 | 1.98 |
5305 | 5612 | 7.896496 | ACTCCCTCTGTCTTAGATTTTTCTAGA | 59.104 | 37.037 | 0.00 | 0.00 | 34.21 | 2.43 |
5306 | 5613 | 8.073467 | ACTCCCTCTGTCTTAGATTTTTCTAG | 57.927 | 38.462 | 0.00 | 0.00 | 34.21 | 2.43 |
5307 | 5614 | 9.543231 | TTACTCCCTCTGTCTTAGATTTTTCTA | 57.457 | 33.333 | 0.00 | 0.00 | 34.21 | 2.10 |
5308 | 5615 | 6.943899 | ACTCCCTCTGTCTTAGATTTTTCT | 57.056 | 37.500 | 0.00 | 0.00 | 34.21 | 2.52 |
5309 | 5616 | 9.503399 | TTTTACTCCCTCTGTCTTAGATTTTTC | 57.497 | 33.333 | 0.00 | 0.00 | 34.21 | 2.29 |
5310 | 5617 | 9.862149 | TTTTTACTCCCTCTGTCTTAGATTTTT | 57.138 | 29.630 | 0.00 | 0.00 | 34.21 | 1.94 |
5312 | 5619 | 9.674068 | GATTTTTACTCCCTCTGTCTTAGATTT | 57.326 | 33.333 | 0.00 | 0.00 | 34.21 | 2.17 |
5313 | 5620 | 9.052365 | AGATTTTTACTCCCTCTGTCTTAGATT | 57.948 | 33.333 | 0.00 | 0.00 | 34.21 | 2.40 |
5314 | 5621 | 8.616799 | AGATTTTTACTCCCTCTGTCTTAGAT | 57.383 | 34.615 | 0.00 | 0.00 | 34.21 | 1.98 |
5315 | 5622 | 9.543231 | TTAGATTTTTACTCCCTCTGTCTTAGA | 57.457 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
5316 | 5623 | 9.810545 | CTTAGATTTTTACTCCCTCTGTCTTAG | 57.189 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
5317 | 5624 | 9.543231 | TCTTAGATTTTTACTCCCTCTGTCTTA | 57.457 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
5318 | 5625 | 8.315482 | GTCTTAGATTTTTACTCCCTCTGTCTT | 58.685 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
5319 | 5626 | 7.455008 | TGTCTTAGATTTTTACTCCCTCTGTCT | 59.545 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
5320 | 5627 | 7.612677 | TGTCTTAGATTTTTACTCCCTCTGTC | 58.387 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
5321 | 5628 | 7.455008 | TCTGTCTTAGATTTTTACTCCCTCTGT | 59.545 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
5322 | 5629 | 7.841956 | TCTGTCTTAGATTTTTACTCCCTCTG | 58.158 | 38.462 | 0.00 | 0.00 | 0.00 | 3.35 |
5323 | 5630 | 7.125053 | CCTCTGTCTTAGATTTTTACTCCCTCT | 59.875 | 40.741 | 0.00 | 0.00 | 34.21 | 3.69 |
5324 | 5631 | 7.269316 | CCTCTGTCTTAGATTTTTACTCCCTC | 58.731 | 42.308 | 0.00 | 0.00 | 34.21 | 4.30 |
5325 | 5632 | 6.157123 | CCCTCTGTCTTAGATTTTTACTCCCT | 59.843 | 42.308 | 0.00 | 0.00 | 34.21 | 4.20 |
5326 | 5633 | 6.156429 | TCCCTCTGTCTTAGATTTTTACTCCC | 59.844 | 42.308 | 0.00 | 0.00 | 34.21 | 4.30 |
5327 | 5634 | 7.093245 | ACTCCCTCTGTCTTAGATTTTTACTCC | 60.093 | 40.741 | 0.00 | 0.00 | 34.21 | 3.85 |
5328 | 5635 | 7.842982 | ACTCCCTCTGTCTTAGATTTTTACTC | 58.157 | 38.462 | 0.00 | 0.00 | 34.21 | 2.59 |
5329 | 5636 | 7.800300 | ACTCCCTCTGTCTTAGATTTTTACT | 57.200 | 36.000 | 0.00 | 0.00 | 34.21 | 2.24 |
5330 | 5637 | 9.752961 | GATACTCCCTCTGTCTTAGATTTTTAC | 57.247 | 37.037 | 0.00 | 0.00 | 34.21 | 2.01 |
5331 | 5638 | 9.716556 | AGATACTCCCTCTGTCTTAGATTTTTA | 57.283 | 33.333 | 0.00 | 0.00 | 34.21 | 1.52 |
5332 | 5639 | 8.616799 | AGATACTCCCTCTGTCTTAGATTTTT | 57.383 | 34.615 | 0.00 | 0.00 | 34.21 | 1.94 |
5333 | 5640 | 8.616799 | AAGATACTCCCTCTGTCTTAGATTTT | 57.383 | 34.615 | 0.00 | 0.00 | 34.21 | 1.82 |
5334 | 5641 | 9.890915 | ATAAGATACTCCCTCTGTCTTAGATTT | 57.109 | 33.333 | 0.00 | 0.00 | 35.56 | 2.17 |
5337 | 5644 | 9.967451 | CATATAAGATACTCCCTCTGTCTTAGA | 57.033 | 37.037 | 0.00 | 0.00 | 35.56 | 2.10 |
5338 | 5645 | 9.747898 | ACATATAAGATACTCCCTCTGTCTTAG | 57.252 | 37.037 | 0.00 | 0.00 | 35.56 | 2.18 |
5340 | 5647 | 9.747898 | CTACATATAAGATACTCCCTCTGTCTT | 57.252 | 37.037 | 0.00 | 0.00 | 33.96 | 3.01 |
5341 | 5648 | 7.832187 | GCTACATATAAGATACTCCCTCTGTCT | 59.168 | 40.741 | 0.00 | 0.00 | 0.00 | 3.41 |
5342 | 5649 | 7.067737 | GGCTACATATAAGATACTCCCTCTGTC | 59.932 | 44.444 | 0.00 | 0.00 | 0.00 | 3.51 |
5343 | 5650 | 6.893005 | GGCTACATATAAGATACTCCCTCTGT | 59.107 | 42.308 | 0.00 | 0.00 | 0.00 | 3.41 |
5344 | 5651 | 6.892456 | TGGCTACATATAAGATACTCCCTCTG | 59.108 | 42.308 | 0.00 | 0.00 | 0.00 | 3.35 |
5345 | 5652 | 6.893005 | GTGGCTACATATAAGATACTCCCTCT | 59.107 | 42.308 | 0.00 | 0.00 | 0.00 | 3.69 |
5346 | 5653 | 6.183360 | CGTGGCTACATATAAGATACTCCCTC | 60.183 | 46.154 | 0.00 | 0.00 | 0.00 | 4.30 |
5347 | 5654 | 5.652891 | CGTGGCTACATATAAGATACTCCCT | 59.347 | 44.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5348 | 5655 | 5.651139 | TCGTGGCTACATATAAGATACTCCC | 59.349 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5349 | 5656 | 6.754702 | TCGTGGCTACATATAAGATACTCC | 57.245 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
5350 | 5657 | 7.986562 | TGATCGTGGCTACATATAAGATACTC | 58.013 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
5351 | 5658 | 7.939784 | TGATCGTGGCTACATATAAGATACT | 57.060 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
5352 | 5659 | 9.239002 | GATTGATCGTGGCTACATATAAGATAC | 57.761 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
5396 | 5703 | 8.943002 | AGTATACCAGCTTGTTTGTATTTGTAC | 58.057 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
5490 | 5797 | 9.730705 | CCACCATCTAAATGTGATGTATAATCT | 57.269 | 33.333 | 0.00 | 0.00 | 39.54 | 2.40 |
5491 | 5798 | 9.507329 | ACCACCATCTAAATGTGATGTATAATC | 57.493 | 33.333 | 0.00 | 0.00 | 39.54 | 1.75 |
5492 | 5799 | 9.288576 | CACCACCATCTAAATGTGATGTATAAT | 57.711 | 33.333 | 0.00 | 0.00 | 39.54 | 1.28 |
5515 | 5822 | 4.578928 | ACACTCAAATGAACACTTACCACC | 59.421 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
5523 | 5830 | 5.914635 | CCACATGTAACACTCAAATGAACAC | 59.085 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
5606 | 5926 | 5.752472 | ACATCGAATGCACAAATTTCAAACA | 59.248 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5607 | 5927 | 6.214205 | ACATCGAATGCACAAATTTCAAAC | 57.786 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
5657 | 5977 | 8.361139 | AGTAATAATACAGGAGTGCACATAGAC | 58.639 | 37.037 | 21.04 | 3.89 | 34.29 | 2.59 |
5663 | 5983 | 6.106673 | ACACAGTAATAATACAGGAGTGCAC | 58.893 | 40.000 | 9.40 | 9.40 | 34.29 | 4.57 |
5667 | 5987 | 9.871238 | CAACTTACACAGTAATAATACAGGAGT | 57.129 | 33.333 | 0.00 | 0.00 | 32.94 | 3.85 |
5670 | 5990 | 9.095065 | GTCCAACTTACACAGTAATAATACAGG | 57.905 | 37.037 | 0.00 | 0.00 | 32.94 | 4.00 |
5678 | 5998 | 6.827727 | ACTTGAGTCCAACTTACACAGTAAT | 58.172 | 36.000 | 0.00 | 0.00 | 32.94 | 1.89 |
5679 | 5999 | 6.229936 | ACTTGAGTCCAACTTACACAGTAA | 57.770 | 37.500 | 0.00 | 0.00 | 32.94 | 2.24 |
5907 | 6227 | 7.144722 | TGATGCGATGTTCAATTAAAGAAGT | 57.855 | 32.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5912 | 6232 | 9.800433 | ACAATATTGATGCGATGTTCAATTAAA | 57.200 | 25.926 | 22.16 | 0.00 | 41.52 | 1.52 |
5924 | 6244 | 8.382030 | ACAAAGATCATACAATATTGATGCGA | 57.618 | 30.769 | 22.16 | 12.07 | 32.84 | 5.10 |
5941 | 6261 | 4.870426 | TCGAAGGACTATGCAACAAAGATC | 59.130 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
5956 | 6276 | 3.146847 | ACAAAACCAAGGATCGAAGGAC | 58.853 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
5970 | 6290 | 6.238076 | CCTGATGTGTTAAAGCAAACAAAACC | 60.238 | 38.462 | 1.46 | 0.00 | 40.85 | 3.27 |
5973 | 6293 | 6.214191 | TCCTGATGTGTTAAAGCAAACAAA | 57.786 | 33.333 | 1.46 | 0.00 | 40.85 | 2.83 |
6002 | 6322 | 4.276926 | ACCAGTGAAAGAGAAATGCTGAAC | 59.723 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
6082 | 6402 | 2.286872 | GAGACACTCCTGCAATCATGG | 58.713 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
6174 | 6494 | 2.856988 | AACCCCGGAAAGCCCTGA | 60.857 | 61.111 | 0.73 | 0.00 | 0.00 | 3.86 |
6393 | 6716 | 3.973425 | AGCCAGCAGAAGGATAAACATT | 58.027 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
6777 | 7100 | 4.907875 | AGGCATTATAGTTTCTCAGCCCTA | 59.092 | 41.667 | 0.00 | 0.00 | 41.69 | 3.53 |
6779 | 7102 | 3.817647 | CAGGCATTATAGTTTCTCAGCCC | 59.182 | 47.826 | 0.00 | 0.00 | 41.69 | 5.19 |
6800 | 7123 | 3.226429 | GACAGGCACGTCTGAGGCA | 62.226 | 63.158 | 10.93 | 0.00 | 38.11 | 4.75 |
6802 | 7125 | 3.371021 | AGACAGGCACGTCTGAGG | 58.629 | 61.111 | 10.93 | 0.00 | 44.59 | 3.86 |
6837 | 7160 | 7.254137 | TCATATCTTCTCGAGTTCTTTGTCTG | 58.746 | 38.462 | 13.13 | 1.43 | 0.00 | 3.51 |
6901 | 7224 | 9.896645 | ATAAGTCATCTCAAGATAAACACACAT | 57.103 | 29.630 | 0.00 | 0.00 | 32.63 | 3.21 |
6908 | 7231 | 7.222805 | GCACGTGATAAGTCATCTCAAGATAAA | 59.777 | 37.037 | 22.23 | 0.00 | 36.60 | 1.40 |
6927 | 7250 | 4.617520 | ACCACATGGCGCACGTGA | 62.618 | 61.111 | 22.23 | 0.00 | 39.46 | 4.35 |
6931 | 7254 | 4.759096 | GCGAACCACATGGCGCAC | 62.759 | 66.667 | 10.83 | 0.00 | 43.19 | 5.34 |
6934 | 7257 | 3.803082 | CTGGCGAACCACATGGCG | 61.803 | 66.667 | 0.00 | 0.00 | 42.67 | 5.69 |
7180 | 7504 | 3.190535 | GCACCTGTAACTTGGTATTGTGG | 59.809 | 47.826 | 0.00 | 0.00 | 34.79 | 4.17 |
7236 | 7560 | 4.273148 | AGAAAGAGACGCACCTGTTATT | 57.727 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
7237 | 7561 | 3.963428 | AGAAAGAGACGCACCTGTTAT | 57.037 | 42.857 | 0.00 | 0.00 | 0.00 | 1.89 |
7238 | 7562 | 3.746045 | AAGAAAGAGACGCACCTGTTA | 57.254 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
7458 | 7786 | 2.598589 | CGTCAATGGTGCCAATTTCAG | 58.401 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
7477 | 7805 | 3.239941 | GCATAGTAGACACGTGTTAAGCG | 59.760 | 47.826 | 24.26 | 9.57 | 0.00 | 4.68 |
7526 | 7854 | 8.655651 | TTGGTTTTAGATTTAAGCTTTTGTGG | 57.344 | 30.769 | 3.20 | 0.00 | 0.00 | 4.17 |
7630 | 7965 | 0.109365 | TAAACATGGCATGTGCGCAC | 60.109 | 50.000 | 31.99 | 33.11 | 44.07 | 5.34 |
7634 | 7969 | 4.265085 | CGTTGTAATAAACATGGCATGTGC | 59.735 | 41.667 | 31.99 | 17.73 | 44.07 | 4.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.