Multiple sequence alignment - TraesCS6D01G251700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G251700 chr6D 100.000 4477 0 0 1 4477 355853386 355857862 0.000000e+00 8268
1 TraesCS6D01G251700 chr6A 93.678 3717 124 41 845 4477 498525555 498529244 0.000000e+00 5459
2 TraesCS6D01G251700 chr6A 91.213 478 31 10 1 473 498336705 498337176 1.360000e-179 640
3 TraesCS6D01G251700 chr6A 92.105 228 16 2 465 692 498381936 498382161 2.010000e-83 320
4 TraesCS6D01G251700 chr6B 92.527 3827 149 58 750 4477 536811156 536814944 0.000000e+00 5356
5 TraesCS6D01G251700 chr6B 88.383 439 32 6 270 700 536810749 536811176 1.110000e-140 510


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G251700 chr6D 355853386 355857862 4476 False 8268 8268 100.000 1 4477 1 chr6D.!!$F1 4476
1 TraesCS6D01G251700 chr6A 498525555 498529244 3689 False 5459 5459 93.678 845 4477 1 chr6A.!!$F3 3632
2 TraesCS6D01G251700 chr6B 536810749 536814944 4195 False 2933 5356 90.455 270 4477 2 chr6B.!!$F1 4207


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
75 76 0.032813 ATGGGTTGCAAGCATAGCCT 60.033 50.0 28.22 3.05 0.00 4.58 F
721 729 0.039527 CACACTGATGTCGACGTGGA 60.040 55.0 16.54 0.00 36.72 4.02 F
1438 1464 0.035820 TCGGCTACACCAATCCAACC 60.036 55.0 0.00 0.00 39.03 3.77 F
2280 2308 0.623194 TCATGGGCCGAGGAAATCAA 59.377 50.0 0.00 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1402 1428 0.600255 CGAGGCCGAACAAGAACAGT 60.600 55.000 0.00 0.00 38.22 3.55 R
2195 2223 2.309136 ATAAGCAAAGGCCAGTTGGT 57.691 45.000 15.84 15.84 42.56 3.67 R
2637 2686 4.261322 CCGTGCATGGGAAAGATAAATCTG 60.261 45.833 17.90 0.00 37.19 2.90 R
4099 4212 1.393539 AGATTGCGTGCGACAATGTAC 59.606 47.619 14.97 0.00 37.85 2.90 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.708576 TGGTACAGGGTGTGTTTATCAA 57.291 40.909 0.00 0.00 40.94 2.57
23 24 4.391155 TGGTACAGGGTGTGTTTATCAAC 58.609 43.478 0.00 0.00 40.94 3.18
24 25 4.103469 TGGTACAGGGTGTGTTTATCAACT 59.897 41.667 0.00 0.00 40.94 3.16
25 26 4.694037 GGTACAGGGTGTGTTTATCAACTC 59.306 45.833 0.00 0.00 40.94 3.01
26 27 3.399330 ACAGGGTGTGTTTATCAACTCG 58.601 45.455 0.00 0.00 34.94 4.18
27 28 3.181458 ACAGGGTGTGTTTATCAACTCGT 60.181 43.478 0.00 0.00 34.94 4.18
28 29 3.186409 CAGGGTGTGTTTATCAACTCGTG 59.814 47.826 0.00 0.00 33.58 4.35
29 30 2.482721 GGGTGTGTTTATCAACTCGTGG 59.517 50.000 0.00 0.00 33.58 4.94
30 31 3.135994 GGTGTGTTTATCAACTCGTGGT 58.864 45.455 0.00 0.00 33.58 4.16
31 32 3.562557 GGTGTGTTTATCAACTCGTGGTT 59.437 43.478 0.00 0.00 38.93 3.67
32 33 4.751098 GGTGTGTTTATCAACTCGTGGTTA 59.249 41.667 0.00 0.00 36.23 2.85
33 34 5.333568 GGTGTGTTTATCAACTCGTGGTTAC 60.334 44.000 0.00 0.00 36.23 2.50
34 35 5.234757 GTGTGTTTATCAACTCGTGGTTACA 59.765 40.000 0.00 0.00 36.23 2.41
35 36 5.816258 TGTGTTTATCAACTCGTGGTTACAA 59.184 36.000 0.00 0.00 36.23 2.41
36 37 6.018588 TGTGTTTATCAACTCGTGGTTACAAG 60.019 38.462 0.00 0.00 36.23 3.16
37 38 6.201425 GTGTTTATCAACTCGTGGTTACAAGA 59.799 38.462 0.00 0.00 36.23 3.02
44 45 1.621814 TCGTGGTTACAAGAGAAGGGG 59.378 52.381 0.00 0.00 31.42 4.79
45 46 1.346722 CGTGGTTACAAGAGAAGGGGT 59.653 52.381 0.00 0.00 0.00 4.95
46 47 2.612221 CGTGGTTACAAGAGAAGGGGTC 60.612 54.545 0.00 0.00 0.00 4.46
47 48 2.638363 GTGGTTACAAGAGAAGGGGTCT 59.362 50.000 0.00 0.00 40.25 3.85
58 59 4.026356 AGAAGGGGTCTCTTTGTGAATG 57.974 45.455 0.00 0.00 0.00 2.67
59 60 2.887151 AGGGGTCTCTTTGTGAATGG 57.113 50.000 0.00 0.00 0.00 3.16
60 61 1.355720 AGGGGTCTCTTTGTGAATGGG 59.644 52.381 0.00 0.00 0.00 4.00
61 62 1.075536 GGGGTCTCTTTGTGAATGGGT 59.924 52.381 0.00 0.00 0.00 4.51
62 63 2.490902 GGGGTCTCTTTGTGAATGGGTT 60.491 50.000 0.00 0.00 0.00 4.11
63 64 2.558359 GGGTCTCTTTGTGAATGGGTTG 59.442 50.000 0.00 0.00 0.00 3.77
64 65 2.029918 GGTCTCTTTGTGAATGGGTTGC 60.030 50.000 0.00 0.00 0.00 4.17
65 66 2.622942 GTCTCTTTGTGAATGGGTTGCA 59.377 45.455 0.00 0.00 0.00 4.08
66 67 3.068024 GTCTCTTTGTGAATGGGTTGCAA 59.932 43.478 0.00 0.00 0.00 4.08
67 68 3.318839 TCTCTTTGTGAATGGGTTGCAAG 59.681 43.478 0.00 0.00 0.00 4.01
68 69 2.137523 CTTTGTGAATGGGTTGCAAGC 58.862 47.619 20.26 20.26 0.00 4.01
69 70 1.117994 TTGTGAATGGGTTGCAAGCA 58.882 45.000 28.22 15.59 0.00 3.91
70 71 1.340088 TGTGAATGGGTTGCAAGCAT 58.660 45.000 28.22 17.02 0.00 3.79
71 72 2.523245 TGTGAATGGGTTGCAAGCATA 58.477 42.857 28.22 17.50 0.00 3.14
72 73 2.492881 TGTGAATGGGTTGCAAGCATAG 59.507 45.455 28.22 0.00 0.00 2.23
73 74 1.477700 TGAATGGGTTGCAAGCATAGC 59.522 47.619 28.22 15.42 0.00 2.97
74 75 0.826062 AATGGGTTGCAAGCATAGCC 59.174 50.000 28.22 13.46 0.00 3.93
75 76 0.032813 ATGGGTTGCAAGCATAGCCT 60.033 50.000 28.22 3.05 0.00 4.58
76 77 0.623194 TGGGTTGCAAGCATAGCCTA 59.377 50.000 28.22 7.21 0.00 3.93
77 78 1.025041 GGGTTGCAAGCATAGCCTAC 58.975 55.000 28.22 6.26 0.00 3.18
78 79 1.408822 GGGTTGCAAGCATAGCCTACT 60.409 52.381 28.22 0.00 0.00 2.57
79 80 1.943340 GGTTGCAAGCATAGCCTACTC 59.057 52.381 23.18 0.00 0.00 2.59
80 81 1.594862 GTTGCAAGCATAGCCTACTCG 59.405 52.381 0.00 0.00 0.00 4.18
81 82 1.111277 TGCAAGCATAGCCTACTCGA 58.889 50.000 0.00 0.00 0.00 4.04
82 83 1.067669 TGCAAGCATAGCCTACTCGAG 59.932 52.381 11.84 11.84 0.00 4.04
83 84 1.338337 GCAAGCATAGCCTACTCGAGA 59.662 52.381 21.68 1.61 0.00 4.04
84 85 2.606795 GCAAGCATAGCCTACTCGAGAG 60.607 54.545 21.68 11.86 0.00 3.20
85 86 2.881513 CAAGCATAGCCTACTCGAGAGA 59.118 50.000 21.68 5.48 39.12 3.10
86 87 3.433306 AGCATAGCCTACTCGAGAGAT 57.567 47.619 21.68 8.62 40.84 2.75
87 88 3.761897 AGCATAGCCTACTCGAGAGATT 58.238 45.455 21.68 0.00 40.84 2.40
88 89 4.912586 AGCATAGCCTACTCGAGAGATTA 58.087 43.478 21.68 5.25 40.84 1.75
89 90 5.317808 AGCATAGCCTACTCGAGAGATTAA 58.682 41.667 21.68 0.32 40.84 1.40
90 91 5.770663 AGCATAGCCTACTCGAGAGATTAAA 59.229 40.000 21.68 0.00 40.84 1.52
91 92 6.435904 AGCATAGCCTACTCGAGAGATTAAAT 59.564 38.462 21.68 1.34 40.84 1.40
92 93 6.529829 GCATAGCCTACTCGAGAGATTAAATG 59.470 42.308 21.68 14.11 40.84 2.32
93 94 5.461032 AGCCTACTCGAGAGATTAAATGG 57.539 43.478 21.68 7.98 40.84 3.16
94 95 5.141182 AGCCTACTCGAGAGATTAAATGGA 58.859 41.667 21.68 0.00 40.84 3.41
95 96 5.242838 AGCCTACTCGAGAGATTAAATGGAG 59.757 44.000 21.68 0.00 40.84 3.86
96 97 5.465935 CCTACTCGAGAGATTAAATGGAGC 58.534 45.833 21.68 0.00 40.84 4.70
97 98 5.010112 CCTACTCGAGAGATTAAATGGAGCA 59.990 44.000 21.68 0.00 40.84 4.26
98 99 5.543507 ACTCGAGAGATTAAATGGAGCAT 57.456 39.130 21.68 0.00 40.84 3.79
99 100 6.656632 ACTCGAGAGATTAAATGGAGCATA 57.343 37.500 21.68 0.00 40.84 3.14
100 101 6.686630 ACTCGAGAGATTAAATGGAGCATAG 58.313 40.000 21.68 0.00 40.84 2.23
101 102 6.266558 ACTCGAGAGATTAAATGGAGCATAGT 59.733 38.462 21.68 0.00 40.84 2.12
102 103 6.682746 TCGAGAGATTAAATGGAGCATAGTC 58.317 40.000 0.00 0.00 33.31 2.59
103 104 6.265422 TCGAGAGATTAAATGGAGCATAGTCA 59.735 38.462 0.00 0.00 33.31 3.41
104 105 6.585702 CGAGAGATTAAATGGAGCATAGTCAG 59.414 42.308 0.00 0.00 0.00 3.51
105 106 7.372260 AGAGATTAAATGGAGCATAGTCAGT 57.628 36.000 0.00 0.00 0.00 3.41
106 107 7.800092 AGAGATTAAATGGAGCATAGTCAGTT 58.200 34.615 0.00 0.00 0.00 3.16
107 108 8.270744 AGAGATTAAATGGAGCATAGTCAGTTT 58.729 33.333 0.00 0.00 0.00 2.66
108 109 8.218338 AGATTAAATGGAGCATAGTCAGTTTG 57.782 34.615 0.00 0.00 0.00 2.93
109 110 6.757897 TTAAATGGAGCATAGTCAGTTTGG 57.242 37.500 0.00 0.00 0.00 3.28
110 111 2.113860 TGGAGCATAGTCAGTTTGGC 57.886 50.000 0.00 0.00 0.00 4.52
111 112 1.340017 TGGAGCATAGTCAGTTTGGCC 60.340 52.381 0.00 0.00 0.00 5.36
112 113 1.383523 GAGCATAGTCAGTTTGGCCC 58.616 55.000 0.00 0.00 0.00 5.80
113 114 0.698238 AGCATAGTCAGTTTGGCCCA 59.302 50.000 0.00 0.00 0.00 5.36
114 115 1.285962 AGCATAGTCAGTTTGGCCCAT 59.714 47.619 0.00 0.00 0.00 4.00
115 116 2.102578 GCATAGTCAGTTTGGCCCATT 58.897 47.619 0.00 0.00 0.00 3.16
116 117 3.053693 AGCATAGTCAGTTTGGCCCATTA 60.054 43.478 0.00 0.00 0.00 1.90
117 118 3.699038 GCATAGTCAGTTTGGCCCATTAA 59.301 43.478 0.00 0.00 0.00 1.40
118 119 4.440112 GCATAGTCAGTTTGGCCCATTAAC 60.440 45.833 0.00 0.00 0.00 2.01
119 120 3.237268 AGTCAGTTTGGCCCATTAACA 57.763 42.857 0.00 0.00 0.00 2.41
120 121 2.890945 AGTCAGTTTGGCCCATTAACAC 59.109 45.455 0.00 0.00 0.00 3.32
121 122 2.625790 GTCAGTTTGGCCCATTAACACA 59.374 45.455 0.00 0.00 0.00 3.72
122 123 3.258123 GTCAGTTTGGCCCATTAACACAT 59.742 43.478 0.00 0.00 0.00 3.21
123 124 3.257873 TCAGTTTGGCCCATTAACACATG 59.742 43.478 0.00 0.00 0.00 3.21
124 125 2.028203 AGTTTGGCCCATTAACACATGC 60.028 45.455 0.00 0.00 0.00 4.06
125 126 1.637338 TTGGCCCATTAACACATGCA 58.363 45.000 0.00 0.00 0.00 3.96
126 127 0.894141 TGGCCCATTAACACATGCAC 59.106 50.000 0.00 0.00 0.00 4.57
127 128 0.894141 GGCCCATTAACACATGCACA 59.106 50.000 0.00 0.00 0.00 4.57
128 129 1.274728 GGCCCATTAACACATGCACAA 59.725 47.619 0.00 0.00 0.00 3.33
129 130 2.093553 GGCCCATTAACACATGCACAAT 60.094 45.455 0.00 0.00 0.00 2.71
130 131 3.598299 GCCCATTAACACATGCACAATT 58.402 40.909 0.00 0.00 0.00 2.32
131 132 4.002316 GCCCATTAACACATGCACAATTT 58.998 39.130 0.00 0.00 0.00 1.82
132 133 4.093261 GCCCATTAACACATGCACAATTTC 59.907 41.667 0.00 0.00 0.00 2.17
133 134 5.481105 CCCATTAACACATGCACAATTTCT 58.519 37.500 0.00 0.00 0.00 2.52
134 135 5.933463 CCCATTAACACATGCACAATTTCTT 59.067 36.000 0.00 0.00 0.00 2.52
135 136 6.427547 CCCATTAACACATGCACAATTTCTTT 59.572 34.615 0.00 0.00 0.00 2.52
136 137 7.041235 CCCATTAACACATGCACAATTTCTTTT 60.041 33.333 0.00 0.00 0.00 2.27
137 138 8.344098 CCATTAACACATGCACAATTTCTTTTT 58.656 29.630 0.00 0.00 0.00 1.94
138 139 9.372541 CATTAACACATGCACAATTTCTTTTTC 57.627 29.630 0.00 0.00 0.00 2.29
139 140 5.989551 ACACATGCACAATTTCTTTTTCC 57.010 34.783 0.00 0.00 0.00 3.13
140 141 5.673514 ACACATGCACAATTTCTTTTTCCT 58.326 33.333 0.00 0.00 0.00 3.36
141 142 5.524646 ACACATGCACAATTTCTTTTTCCTG 59.475 36.000 0.00 0.00 0.00 3.86
142 143 5.754406 CACATGCACAATTTCTTTTTCCTGA 59.246 36.000 0.00 0.00 0.00 3.86
143 144 6.425721 CACATGCACAATTTCTTTTTCCTGAT 59.574 34.615 0.00 0.00 0.00 2.90
144 145 7.599621 CACATGCACAATTTCTTTTTCCTGATA 59.400 33.333 0.00 0.00 0.00 2.15
145 146 8.149647 ACATGCACAATTTCTTTTTCCTGATAA 58.850 29.630 0.00 0.00 0.00 1.75
146 147 9.158233 CATGCACAATTTCTTTTTCCTGATAAT 57.842 29.630 0.00 0.00 0.00 1.28
147 148 9.729281 ATGCACAATTTCTTTTTCCTGATAATT 57.271 25.926 0.00 0.00 0.00 1.40
148 149 9.206870 TGCACAATTTCTTTTTCCTGATAATTC 57.793 29.630 0.00 0.00 0.00 2.17
149 150 8.375465 GCACAATTTCTTTTTCCTGATAATTCG 58.625 33.333 0.00 0.00 0.00 3.34
150 151 8.375465 CACAATTTCTTTTTCCTGATAATTCGC 58.625 33.333 0.00 0.00 0.00 4.70
151 152 8.306761 ACAATTTCTTTTTCCTGATAATTCGCT 58.693 29.630 0.00 0.00 0.00 4.93
152 153 9.143631 CAATTTCTTTTTCCTGATAATTCGCTT 57.856 29.630 0.00 0.00 0.00 4.68
153 154 8.693542 ATTTCTTTTTCCTGATAATTCGCTTG 57.306 30.769 0.00 0.00 0.00 4.01
154 155 7.447374 TTCTTTTTCCTGATAATTCGCTTGA 57.553 32.000 0.00 0.00 0.00 3.02
155 156 7.630242 TCTTTTTCCTGATAATTCGCTTGAT 57.370 32.000 0.00 0.00 0.00 2.57
156 157 8.731275 TCTTTTTCCTGATAATTCGCTTGATA 57.269 30.769 0.00 0.00 0.00 2.15
157 158 9.342308 TCTTTTTCCTGATAATTCGCTTGATAT 57.658 29.630 0.00 0.00 0.00 1.63
229 230 6.869421 AAAAGTATATTTTGTGCGCATGTC 57.131 33.333 15.91 0.09 0.00 3.06
230 231 5.559427 AAGTATATTTTGTGCGCATGTCA 57.441 34.783 15.91 3.64 0.00 3.58
231 232 5.756195 AGTATATTTTGTGCGCATGTCAT 57.244 34.783 15.91 6.86 0.00 3.06
232 233 6.135290 AGTATATTTTGTGCGCATGTCATT 57.865 33.333 15.91 0.00 0.00 2.57
233 234 7.258022 AGTATATTTTGTGCGCATGTCATTA 57.742 32.000 15.91 2.18 0.00 1.90
234 235 7.355017 AGTATATTTTGTGCGCATGTCATTAG 58.645 34.615 15.91 0.00 0.00 1.73
235 236 4.700268 ATTTTGTGCGCATGTCATTAGA 57.300 36.364 15.91 0.00 0.00 2.10
236 237 4.495911 TTTTGTGCGCATGTCATTAGAA 57.504 36.364 15.91 0.00 0.00 2.10
237 238 3.469899 TTGTGCGCATGTCATTAGAAC 57.530 42.857 15.91 0.00 0.00 3.01
238 239 2.421619 TGTGCGCATGTCATTAGAACA 58.578 42.857 15.91 0.00 0.00 3.18
239 240 3.009026 TGTGCGCATGTCATTAGAACAT 58.991 40.909 15.91 0.00 0.00 2.71
240 241 3.439825 TGTGCGCATGTCATTAGAACATT 59.560 39.130 15.91 0.00 0.00 2.71
241 242 3.787634 GTGCGCATGTCATTAGAACATTG 59.212 43.478 15.91 0.00 0.00 2.82
242 243 3.439825 TGCGCATGTCATTAGAACATTGT 59.560 39.130 5.66 0.00 0.00 2.71
243 244 4.082841 TGCGCATGTCATTAGAACATTGTT 60.083 37.500 5.66 0.63 0.00 2.83
244 245 4.496895 GCGCATGTCATTAGAACATTGTTC 59.503 41.667 19.64 19.64 0.00 3.18
245 246 5.630061 CGCATGTCATTAGAACATTGTTCA 58.370 37.500 26.73 11.32 0.00 3.18
246 247 6.260377 CGCATGTCATTAGAACATTGTTCAT 58.740 36.000 26.73 16.05 0.00 2.57
247 248 6.195798 CGCATGTCATTAGAACATTGTTCATG 59.804 38.462 26.73 21.69 39.07 3.07
431 438 1.673920 GTGGTCACGCCTCTTGAAAAA 59.326 47.619 0.00 0.00 38.35 1.94
439 446 5.937540 TCACGCCTCTTGAAAAATCTTCATA 59.062 36.000 0.00 0.00 0.00 2.15
653 660 9.553418 AAAAATGCTTGTGTATTTGACAAAAAC 57.447 25.926 4.41 4.97 40.66 2.43
693 701 8.512966 TTTTCTAAAAACAAAGAAAATGGGGG 57.487 30.769 6.23 0.00 43.34 5.40
694 702 7.439108 TTCTAAAAACAAAGAAAATGGGGGA 57.561 32.000 0.00 0.00 0.00 4.81
695 703 7.439108 TCTAAAAACAAAGAAAATGGGGGAA 57.561 32.000 0.00 0.00 0.00 3.97
696 704 7.862675 TCTAAAAACAAAGAAAATGGGGGAAA 58.137 30.769 0.00 0.00 0.00 3.13
697 705 8.329502 TCTAAAAACAAAGAAAATGGGGGAAAA 58.670 29.630 0.00 0.00 0.00 2.29
698 706 7.782897 AAAAACAAAGAAAATGGGGGAAAAA 57.217 28.000 0.00 0.00 0.00 1.94
718 726 3.474007 GACACACTGATGTCGACGT 57.526 52.632 10.75 10.75 39.69 4.34
719 727 1.053048 GACACACTGATGTCGACGTG 58.947 55.000 16.54 16.58 39.69 4.49
720 728 0.318699 ACACACTGATGTCGACGTGG 60.319 55.000 16.54 10.16 36.72 4.94
721 729 0.039527 CACACTGATGTCGACGTGGA 60.040 55.000 16.54 0.00 36.72 4.02
722 730 0.671796 ACACTGATGTCGACGTGGAA 59.328 50.000 16.54 0.00 31.55 3.53
723 731 1.067974 ACACTGATGTCGACGTGGAAA 59.932 47.619 16.54 0.00 31.55 3.13
724 732 1.721389 CACTGATGTCGACGTGGAAAG 59.279 52.381 16.54 9.55 0.00 2.62
725 733 0.716108 CTGATGTCGACGTGGAAAGC 59.284 55.000 16.54 0.00 0.00 3.51
726 734 0.669318 TGATGTCGACGTGGAAAGCC 60.669 55.000 16.54 0.00 0.00 4.35
727 735 0.389948 GATGTCGACGTGGAAAGCCT 60.390 55.000 16.54 0.00 34.31 4.58
728 736 0.892755 ATGTCGACGTGGAAAGCCTA 59.107 50.000 10.06 0.00 34.31 3.93
729 737 0.675083 TGTCGACGTGGAAAGCCTAA 59.325 50.000 11.62 0.00 34.31 2.69
730 738 1.066136 GTCGACGTGGAAAGCCTAAC 58.934 55.000 0.40 0.00 34.31 2.34
731 739 0.675083 TCGACGTGGAAAGCCTAACA 59.325 50.000 0.00 0.00 34.31 2.41
732 740 1.068895 TCGACGTGGAAAGCCTAACAA 59.931 47.619 0.00 0.00 34.31 2.83
733 741 1.459592 CGACGTGGAAAGCCTAACAAG 59.540 52.381 0.00 0.00 34.31 3.16
734 742 1.804748 GACGTGGAAAGCCTAACAAGG 59.195 52.381 0.00 0.00 34.31 3.61
735 743 1.165270 CGTGGAAAGCCTAACAAGGG 58.835 55.000 0.00 0.00 34.31 3.95
736 744 1.271163 CGTGGAAAGCCTAACAAGGGA 60.271 52.381 0.00 0.00 34.31 4.20
737 745 2.618045 CGTGGAAAGCCTAACAAGGGAT 60.618 50.000 0.00 0.00 34.31 3.85
738 746 3.017442 GTGGAAAGCCTAACAAGGGATC 58.983 50.000 0.00 0.00 34.31 3.36
739 747 2.289565 GGAAAGCCTAACAAGGGATCG 58.710 52.381 0.00 0.00 0.00 3.69
740 748 2.355818 GGAAAGCCTAACAAGGGATCGT 60.356 50.000 0.00 0.00 0.00 3.73
741 749 2.693267 AAGCCTAACAAGGGATCGTC 57.307 50.000 0.00 0.00 0.00 4.20
742 750 1.867363 AGCCTAACAAGGGATCGTCT 58.133 50.000 0.00 0.00 0.00 4.18
743 751 3.028094 AGCCTAACAAGGGATCGTCTA 57.972 47.619 0.00 0.00 0.00 2.59
744 752 2.694109 AGCCTAACAAGGGATCGTCTAC 59.306 50.000 0.00 0.00 0.00 2.59
745 753 2.429610 GCCTAACAAGGGATCGTCTACA 59.570 50.000 0.00 0.00 0.00 2.74
746 754 3.491104 GCCTAACAAGGGATCGTCTACAG 60.491 52.174 0.00 0.00 0.00 2.74
747 755 2.674796 AACAAGGGATCGTCTACAGC 57.325 50.000 0.00 0.00 0.00 4.40
748 756 1.557099 ACAAGGGATCGTCTACAGCA 58.443 50.000 0.00 0.00 0.00 4.41
749 757 1.899814 ACAAGGGATCGTCTACAGCAA 59.100 47.619 0.00 0.00 0.00 3.91
750 758 2.301870 ACAAGGGATCGTCTACAGCAAA 59.698 45.455 0.00 0.00 0.00 3.68
751 759 3.244422 ACAAGGGATCGTCTACAGCAAAA 60.244 43.478 0.00 0.00 0.00 2.44
752 760 3.252974 AGGGATCGTCTACAGCAAAAG 57.747 47.619 0.00 0.00 0.00 2.27
753 761 2.832129 AGGGATCGTCTACAGCAAAAGA 59.168 45.455 0.00 0.00 0.00 2.52
754 762 3.260884 AGGGATCGTCTACAGCAAAAGAA 59.739 43.478 0.00 0.00 0.00 2.52
755 763 4.000988 GGGATCGTCTACAGCAAAAGAAA 58.999 43.478 0.00 0.00 0.00 2.52
756 764 4.454504 GGGATCGTCTACAGCAAAAGAAAA 59.545 41.667 0.00 0.00 0.00 2.29
757 765 5.048991 GGGATCGTCTACAGCAAAAGAAAAA 60.049 40.000 0.00 0.00 0.00 1.94
758 766 6.080406 GGATCGTCTACAGCAAAAGAAAAAG 58.920 40.000 0.00 0.00 0.00 2.27
759 767 5.418310 TCGTCTACAGCAAAAGAAAAAGG 57.582 39.130 0.00 0.00 0.00 3.11
770 778 9.489393 CAGCAAAAGAAAAAGGTGAATAAAAAC 57.511 29.630 0.00 0.00 0.00 2.43
771 779 9.448438 AGCAAAAGAAAAAGGTGAATAAAAACT 57.552 25.926 0.00 0.00 0.00 2.66
800 808 3.786101 CGATCCACTCGGTTGCTG 58.214 61.111 0.00 0.00 43.82 4.41
801 809 2.456119 CGATCCACTCGGTTGCTGC 61.456 63.158 0.00 0.00 43.82 5.25
810 818 2.100916 ACTCGGTTGCTGCTATACGAAT 59.899 45.455 12.62 3.31 0.00 3.34
818 826 2.662156 GCTGCTATACGAATAAGACGGC 59.338 50.000 0.00 0.00 34.93 5.68
841 849 6.033966 GCCCGTTAGAACTATTTCCAAATTG 58.966 40.000 0.00 0.00 31.28 2.32
909 934 2.334977 GGGAAAACCAGTGGGGAAAAT 58.665 47.619 15.21 0.00 41.15 1.82
1368 1394 1.153958 CGTGCTCTGATGCGTCTGA 60.154 57.895 14.06 14.06 35.36 3.27
1402 1428 1.176527 GCATCTTTGGCAACCAGCTA 58.823 50.000 0.00 0.00 44.79 3.32
1435 1461 1.904771 CCTCGGCTACACCAATCCA 59.095 57.895 0.00 0.00 39.03 3.41
1438 1464 0.035820 TCGGCTACACCAATCCAACC 60.036 55.000 0.00 0.00 39.03 3.77
1527 1553 8.993121 GTCAGTCTCACTCAATCTTGAAAAATA 58.007 33.333 0.00 0.00 36.64 1.40
1815 1841 3.270877 GAAAAGTGGCATATCGGAGTGT 58.729 45.455 0.00 0.00 0.00 3.55
1894 1920 1.537202 GATTTTCAGGCTGTTGTCGCT 59.463 47.619 15.27 0.00 0.00 4.93
2195 2223 3.117550 AGGCCCATATTTATGCTGTGTGA 60.118 43.478 0.00 0.00 32.40 3.58
2214 2242 2.171003 GACCAACTGGCCTTTGCTTAT 58.829 47.619 3.32 0.00 39.32 1.73
2245 2273 6.454795 ACATGGTATGTTGTTTGGTGAATTC 58.545 36.000 0.00 0.00 41.63 2.17
2280 2308 0.623194 TCATGGGCCGAGGAAATCAA 59.377 50.000 0.00 0.00 0.00 2.57
2289 2317 4.415735 GCCGAGGAAATCAAACTTCATTC 58.584 43.478 0.00 0.00 0.00 2.67
2337 2365 4.833390 AGAAGGAGATCACCCTTTTAACG 58.167 43.478 17.21 0.00 43.59 3.18
2500 2549 3.746940 GGTGAAGTACCCTTGCAGTTTA 58.253 45.455 0.00 0.00 44.15 2.01
2658 2707 5.357878 TGTCAGATTTATCTTTCCCATGCAC 59.642 40.000 0.00 0.00 34.22 4.57
2704 2753 3.293337 TGTATGTAGTACTGTGGCGGAT 58.707 45.455 5.39 0.00 34.27 4.18
2787 2836 5.312895 ACGCATGCCACCATAAATATTCTA 58.687 37.500 13.15 0.00 0.00 2.10
2855 2904 8.718102 TTCATCTGCTCTTAATACTGGTTTAC 57.282 34.615 0.00 0.00 0.00 2.01
3121 3171 5.308014 TGTAGGATATGCACATTGATGTCC 58.692 41.667 0.00 0.00 39.39 4.02
3255 3313 9.147732 TCTTTTGATCTGAGGTATAATCTGCTA 57.852 33.333 0.00 0.00 0.00 3.49
3461 3519 3.562176 CCCTTTCTAGGCTGTGGAATGTT 60.562 47.826 0.00 0.00 40.50 2.71
3487 3545 5.471116 CACATGAATCTTGAGAAGTTGGTGA 59.529 40.000 0.00 0.00 0.00 4.02
3503 3561 4.558226 TGGTGATCTATGCAACTTCTGT 57.442 40.909 0.00 0.00 0.00 3.41
3543 3609 9.791820 TGATGAGTAAAAATACAGAATGCATTG 57.208 29.630 18.59 6.76 42.53 2.82
3579 3645 1.003349 AGTGCTGCAGAGAAGATTGCT 59.997 47.619 20.43 0.00 40.87 3.91
3598 3664 9.842775 AGATTGCTCTGAAGATTGTTAATGATA 57.157 29.630 0.00 0.00 0.00 2.15
3673 3756 5.182760 AGACAAAAGAGAAGCCATGTTCATC 59.817 40.000 0.00 0.00 0.00 2.92
3721 3806 6.127101 TGAGGATGCTGAATTGATGATTCTT 58.873 36.000 0.00 0.00 43.74 2.52
3722 3807 6.262496 TGAGGATGCTGAATTGATGATTCTTC 59.738 38.462 0.00 0.00 43.74 2.87
3723 3808 6.366340 AGGATGCTGAATTGATGATTCTTCT 58.634 36.000 0.00 0.00 43.74 2.85
3724 3809 6.263392 AGGATGCTGAATTGATGATTCTTCTG 59.737 38.462 0.00 0.00 43.74 3.02
3728 3813 8.515695 TGCTGAATTGATGATTCTTCTGTAAT 57.484 30.769 1.76 0.00 43.74 1.89
3752 3837 1.264749 TGCAAGGTAGCTCCACCGAT 61.265 55.000 0.00 0.00 43.84 4.18
3846 3955 9.267084 ACTTTGAGAGAAATGAAACTCTCTTAC 57.733 33.333 19.84 2.38 46.66 2.34
3858 3971 4.506886 ACTCTCTTACCTGTGAAGTTCG 57.493 45.455 0.00 0.00 0.00 3.95
3899 4012 7.806487 TGTTTCGTACTACTACTCAATGAGTTG 59.194 37.037 21.83 20.88 40.28 3.16
3920 4033 0.445436 CAATTCTGCAGTCTGGACGC 59.555 55.000 14.67 9.37 36.20 5.19
3930 4043 2.052237 CTGGACGCGTGTTGCAAC 60.052 61.111 20.70 22.83 46.97 4.17
3937 4050 3.040099 GACGCGTGTTGCAACTATTTTT 58.960 40.909 28.61 10.07 46.97 1.94
3947 4060 4.870363 TGCAACTATTTTTCAGGCTGTTC 58.130 39.130 15.27 0.00 0.00 3.18
3953 4066 5.985530 ACTATTTTTCAGGCTGTTCTTTTGC 59.014 36.000 15.27 0.00 0.00 3.68
3960 4073 1.203065 GCTGTTCTTTTGCACTGCAC 58.797 50.000 2.26 0.00 39.45 4.57
3961 4074 1.843992 CTGTTCTTTTGCACTGCACC 58.156 50.000 2.26 0.00 38.71 5.01
3962 4075 1.406539 CTGTTCTTTTGCACTGCACCT 59.593 47.619 2.26 0.00 38.71 4.00
3963 4076 1.134753 TGTTCTTTTGCACTGCACCTG 59.865 47.619 2.26 0.00 38.71 4.00
3964 4077 0.102844 TTCTTTTGCACTGCACCTGC 59.897 50.000 2.26 4.87 38.71 4.85
3989 4102 6.422776 AGTATGCTTTTCACCAATAGTTCG 57.577 37.500 0.00 0.00 0.00 3.95
3996 4109 4.742438 TTCACCAATAGTTCGTTCTTGC 57.258 40.909 0.00 0.00 0.00 4.01
4087 4200 0.613260 TACCCATGCACCACTCTGTC 59.387 55.000 0.00 0.00 0.00 3.51
4099 4212 3.695060 ACCACTCTGTCGGTCTACTATTG 59.305 47.826 0.00 0.00 0.00 1.90
4105 4218 6.602406 ACTCTGTCGGTCTACTATTGTACATT 59.398 38.462 0.00 0.00 0.00 2.71
4108 4221 6.558009 TGTCGGTCTACTATTGTACATTGTC 58.442 40.000 0.00 0.00 0.00 3.18
4148 4261 0.816018 AAACATCGGACGTGTTGGCA 60.816 50.000 0.00 0.00 39.57 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.648651 AGTTGATAAACACACCCTGTACC 58.351 43.478 0.00 0.00 30.51 3.34
3 4 4.387862 CGAGTTGATAAACACACCCTGTAC 59.612 45.833 0.00 0.00 30.51 2.90
5 6 3.181458 ACGAGTTGATAAACACACCCTGT 60.181 43.478 0.00 0.00 32.89 4.00
6 7 3.186409 CACGAGTTGATAAACACACCCTG 59.814 47.826 0.00 0.00 0.00 4.45
7 8 3.399330 CACGAGTTGATAAACACACCCT 58.601 45.455 0.00 0.00 0.00 4.34
8 9 2.482721 CCACGAGTTGATAAACACACCC 59.517 50.000 0.00 0.00 0.00 4.61
9 10 3.135994 ACCACGAGTTGATAAACACACC 58.864 45.455 0.00 0.00 0.00 4.16
10 11 4.806342 AACCACGAGTTGATAAACACAC 57.194 40.909 0.00 0.00 37.29 3.82
11 12 5.358090 TGTAACCACGAGTTGATAAACACA 58.642 37.500 0.00 0.00 39.67 3.72
12 13 5.910637 TGTAACCACGAGTTGATAAACAC 57.089 39.130 0.00 0.00 39.67 3.32
13 14 6.282167 TCTTGTAACCACGAGTTGATAAACA 58.718 36.000 0.00 0.30 39.67 2.83
14 15 6.643770 TCTCTTGTAACCACGAGTTGATAAAC 59.356 38.462 5.96 0.00 39.67 2.01
15 16 6.751157 TCTCTTGTAACCACGAGTTGATAAA 58.249 36.000 5.96 0.00 39.67 1.40
16 17 6.335471 TCTCTTGTAACCACGAGTTGATAA 57.665 37.500 5.96 0.00 39.67 1.75
17 18 5.970317 TCTCTTGTAACCACGAGTTGATA 57.030 39.130 5.96 0.00 39.67 2.15
18 19 4.866508 TCTCTTGTAACCACGAGTTGAT 57.133 40.909 5.96 0.00 39.67 2.57
19 20 4.500887 CCTTCTCTTGTAACCACGAGTTGA 60.501 45.833 5.96 0.00 39.67 3.18
20 21 3.741344 CCTTCTCTTGTAACCACGAGTTG 59.259 47.826 5.96 0.00 39.67 3.16
21 22 3.244112 CCCTTCTCTTGTAACCACGAGTT 60.244 47.826 0.00 0.00 42.83 3.01
22 23 2.299297 CCCTTCTCTTGTAACCACGAGT 59.701 50.000 0.00 0.00 37.98 4.18
23 24 2.353803 CCCCTTCTCTTGTAACCACGAG 60.354 54.545 0.00 0.00 38.09 4.18
24 25 1.621814 CCCCTTCTCTTGTAACCACGA 59.378 52.381 0.00 0.00 0.00 4.35
25 26 1.346722 ACCCCTTCTCTTGTAACCACG 59.653 52.381 0.00 0.00 0.00 4.94
26 27 2.638363 AGACCCCTTCTCTTGTAACCAC 59.362 50.000 0.00 0.00 0.00 4.16
27 28 2.904434 GAGACCCCTTCTCTTGTAACCA 59.096 50.000 0.00 0.00 46.68 3.67
28 29 3.613494 GAGACCCCTTCTCTTGTAACC 57.387 52.381 0.00 0.00 46.68 2.85
37 38 3.245052 CCATTCACAAAGAGACCCCTTCT 60.245 47.826 0.00 0.00 37.23 2.85
38 39 3.084786 CCATTCACAAAGAGACCCCTTC 58.915 50.000 0.00 0.00 0.00 3.46
39 40 2.225117 CCCATTCACAAAGAGACCCCTT 60.225 50.000 0.00 0.00 0.00 3.95
40 41 1.355720 CCCATTCACAAAGAGACCCCT 59.644 52.381 0.00 0.00 0.00 4.79
41 42 1.075536 ACCCATTCACAAAGAGACCCC 59.924 52.381 0.00 0.00 0.00 4.95
42 43 2.558359 CAACCCATTCACAAAGAGACCC 59.442 50.000 0.00 0.00 0.00 4.46
43 44 2.029918 GCAACCCATTCACAAAGAGACC 60.030 50.000 0.00 0.00 0.00 3.85
44 45 2.622942 TGCAACCCATTCACAAAGAGAC 59.377 45.455 0.00 0.00 0.00 3.36
45 46 2.942804 TGCAACCCATTCACAAAGAGA 58.057 42.857 0.00 0.00 0.00 3.10
46 47 3.645884 CTTGCAACCCATTCACAAAGAG 58.354 45.455 0.00 0.00 0.00 2.85
47 48 2.224018 GCTTGCAACCCATTCACAAAGA 60.224 45.455 0.00 0.00 0.00 2.52
48 49 2.137523 GCTTGCAACCCATTCACAAAG 58.862 47.619 0.00 0.00 0.00 2.77
49 50 1.483827 TGCTTGCAACCCATTCACAAA 59.516 42.857 0.00 0.00 0.00 2.83
50 51 1.117994 TGCTTGCAACCCATTCACAA 58.882 45.000 0.00 0.00 0.00 3.33
51 52 1.340088 ATGCTTGCAACCCATTCACA 58.660 45.000 0.00 0.00 0.00 3.58
52 53 2.736400 GCTATGCTTGCAACCCATTCAC 60.736 50.000 11.76 1.61 0.00 3.18
53 54 1.477700 GCTATGCTTGCAACCCATTCA 59.522 47.619 11.76 0.00 0.00 2.57
54 55 1.202452 GGCTATGCTTGCAACCCATTC 60.202 52.381 11.76 6.15 0.00 2.67
55 56 0.826062 GGCTATGCTTGCAACCCATT 59.174 50.000 11.76 0.20 0.00 3.16
56 57 0.032813 AGGCTATGCTTGCAACCCAT 60.033 50.000 11.37 11.37 0.00 4.00
57 58 0.623194 TAGGCTATGCTTGCAACCCA 59.377 50.000 0.00 0.00 0.00 4.51
58 59 1.025041 GTAGGCTATGCTTGCAACCC 58.975 55.000 0.00 0.76 0.00 4.11
59 60 1.943340 GAGTAGGCTATGCTTGCAACC 59.057 52.381 0.00 2.17 0.00 3.77
60 61 1.594862 CGAGTAGGCTATGCTTGCAAC 59.405 52.381 0.00 0.00 0.00 4.17
61 62 1.480545 TCGAGTAGGCTATGCTTGCAA 59.519 47.619 0.00 0.00 0.00 4.08
62 63 1.067669 CTCGAGTAGGCTATGCTTGCA 59.932 52.381 3.62 0.00 0.00 4.08
63 64 1.338337 TCTCGAGTAGGCTATGCTTGC 59.662 52.381 13.13 0.00 0.00 4.01
64 65 2.881513 TCTCTCGAGTAGGCTATGCTTG 59.118 50.000 13.13 0.00 0.00 4.01
65 66 3.216187 TCTCTCGAGTAGGCTATGCTT 57.784 47.619 13.13 0.00 0.00 3.91
66 67 2.940994 TCTCTCGAGTAGGCTATGCT 57.059 50.000 13.13 0.00 0.00 3.79
67 68 5.630661 TTAATCTCTCGAGTAGGCTATGC 57.369 43.478 13.13 0.00 0.00 3.14
68 69 7.032580 CCATTTAATCTCTCGAGTAGGCTATG 58.967 42.308 13.13 9.15 0.00 2.23
69 70 6.948886 TCCATTTAATCTCTCGAGTAGGCTAT 59.051 38.462 13.13 0.00 0.00 2.97
70 71 6.304624 TCCATTTAATCTCTCGAGTAGGCTA 58.695 40.000 13.13 0.00 0.00 3.93
71 72 5.141182 TCCATTTAATCTCTCGAGTAGGCT 58.859 41.667 13.13 0.00 0.00 4.58
72 73 5.455056 TCCATTTAATCTCTCGAGTAGGC 57.545 43.478 13.13 0.00 0.00 3.93
73 74 5.010112 TGCTCCATTTAATCTCTCGAGTAGG 59.990 44.000 13.13 4.50 0.00 3.18
74 75 6.078202 TGCTCCATTTAATCTCTCGAGTAG 57.922 41.667 13.13 8.80 0.00 2.57
75 76 6.656632 ATGCTCCATTTAATCTCTCGAGTA 57.343 37.500 13.13 2.27 0.00 2.59
76 77 5.543507 ATGCTCCATTTAATCTCTCGAGT 57.456 39.130 13.13 0.00 0.00 4.18
77 78 6.686630 ACTATGCTCCATTTAATCTCTCGAG 58.313 40.000 5.93 5.93 0.00 4.04
78 79 6.265422 TGACTATGCTCCATTTAATCTCTCGA 59.735 38.462 0.00 0.00 0.00 4.04
79 80 6.450545 TGACTATGCTCCATTTAATCTCTCG 58.549 40.000 0.00 0.00 0.00 4.04
80 81 7.441017 ACTGACTATGCTCCATTTAATCTCTC 58.559 38.462 0.00 0.00 0.00 3.20
81 82 7.372260 ACTGACTATGCTCCATTTAATCTCT 57.628 36.000 0.00 0.00 0.00 3.10
82 83 8.341173 CAAACTGACTATGCTCCATTTAATCTC 58.659 37.037 0.00 0.00 0.00 2.75
83 84 7.284034 CCAAACTGACTATGCTCCATTTAATCT 59.716 37.037 0.00 0.00 0.00 2.40
84 85 7.420800 CCAAACTGACTATGCTCCATTTAATC 58.579 38.462 0.00 0.00 0.00 1.75
85 86 6.183360 GCCAAACTGACTATGCTCCATTTAAT 60.183 38.462 0.00 0.00 0.00 1.40
86 87 5.125417 GCCAAACTGACTATGCTCCATTTAA 59.875 40.000 0.00 0.00 0.00 1.52
87 88 4.640201 GCCAAACTGACTATGCTCCATTTA 59.360 41.667 0.00 0.00 0.00 1.40
88 89 3.445096 GCCAAACTGACTATGCTCCATTT 59.555 43.478 0.00 0.00 0.00 2.32
89 90 3.019564 GCCAAACTGACTATGCTCCATT 58.980 45.455 0.00 0.00 0.00 3.16
90 91 2.648059 GCCAAACTGACTATGCTCCAT 58.352 47.619 0.00 0.00 0.00 3.41
91 92 1.340017 GGCCAAACTGACTATGCTCCA 60.340 52.381 0.00 0.00 0.00 3.86
92 93 1.383523 GGCCAAACTGACTATGCTCC 58.616 55.000 0.00 0.00 0.00 4.70
93 94 1.340017 TGGGCCAAACTGACTATGCTC 60.340 52.381 2.13 0.00 0.00 4.26
94 95 0.698238 TGGGCCAAACTGACTATGCT 59.302 50.000 2.13 0.00 0.00 3.79
95 96 1.767759 ATGGGCCAAACTGACTATGC 58.232 50.000 11.89 0.00 0.00 3.14
96 97 4.704540 TGTTAATGGGCCAAACTGACTATG 59.295 41.667 11.89 0.00 0.00 2.23
97 98 4.705023 GTGTTAATGGGCCAAACTGACTAT 59.295 41.667 11.89 0.00 0.00 2.12
98 99 4.076394 GTGTTAATGGGCCAAACTGACTA 58.924 43.478 11.89 0.00 0.00 2.59
99 100 2.890945 GTGTTAATGGGCCAAACTGACT 59.109 45.455 11.89 0.00 0.00 3.41
100 101 2.625790 TGTGTTAATGGGCCAAACTGAC 59.374 45.455 11.89 7.43 0.00 3.51
101 102 2.950781 TGTGTTAATGGGCCAAACTGA 58.049 42.857 11.89 0.00 0.00 3.41
102 103 3.587923 CATGTGTTAATGGGCCAAACTG 58.412 45.455 11.89 2.32 0.00 3.16
103 104 2.028203 GCATGTGTTAATGGGCCAAACT 60.028 45.455 11.89 0.00 0.00 2.66
104 105 2.289320 TGCATGTGTTAATGGGCCAAAC 60.289 45.455 11.89 12.65 0.00 2.93
105 106 1.973515 TGCATGTGTTAATGGGCCAAA 59.026 42.857 11.89 0.00 0.00 3.28
106 107 1.274728 GTGCATGTGTTAATGGGCCAA 59.725 47.619 11.89 0.00 0.00 4.52
107 108 0.894141 GTGCATGTGTTAATGGGCCA 59.106 50.000 9.61 9.61 0.00 5.36
108 109 0.894141 TGTGCATGTGTTAATGGGCC 59.106 50.000 0.00 0.00 0.00 5.80
109 110 2.739885 TTGTGCATGTGTTAATGGGC 57.260 45.000 0.00 0.00 0.00 5.36
110 111 5.481105 AGAAATTGTGCATGTGTTAATGGG 58.519 37.500 0.00 0.00 0.00 4.00
111 112 7.424227 AAAGAAATTGTGCATGTGTTAATGG 57.576 32.000 0.00 0.00 0.00 3.16
112 113 9.372541 GAAAAAGAAATTGTGCATGTGTTAATG 57.627 29.630 0.00 0.00 0.00 1.90
113 114 8.558700 GGAAAAAGAAATTGTGCATGTGTTAAT 58.441 29.630 0.00 0.00 0.00 1.40
114 115 7.768120 AGGAAAAAGAAATTGTGCATGTGTTAA 59.232 29.630 0.00 0.00 0.00 2.01
115 116 7.224362 CAGGAAAAAGAAATTGTGCATGTGTTA 59.776 33.333 0.00 0.00 0.00 2.41
116 117 6.037391 CAGGAAAAAGAAATTGTGCATGTGTT 59.963 34.615 0.00 0.00 0.00 3.32
117 118 5.524646 CAGGAAAAAGAAATTGTGCATGTGT 59.475 36.000 0.00 0.00 0.00 3.72
118 119 5.754406 TCAGGAAAAAGAAATTGTGCATGTG 59.246 36.000 0.00 0.00 0.00 3.21
119 120 5.916318 TCAGGAAAAAGAAATTGTGCATGT 58.084 33.333 0.00 0.00 0.00 3.21
120 121 8.537049 TTATCAGGAAAAAGAAATTGTGCATG 57.463 30.769 0.00 0.00 0.00 4.06
121 122 9.729281 AATTATCAGGAAAAAGAAATTGTGCAT 57.271 25.926 0.00 0.00 0.00 3.96
122 123 9.206870 GAATTATCAGGAAAAAGAAATTGTGCA 57.793 29.630 0.00 0.00 0.00 4.57
123 124 8.375465 CGAATTATCAGGAAAAAGAAATTGTGC 58.625 33.333 0.00 0.00 0.00 4.57
124 125 8.375465 GCGAATTATCAGGAAAAAGAAATTGTG 58.625 33.333 0.00 0.00 0.00 3.33
125 126 8.306761 AGCGAATTATCAGGAAAAAGAAATTGT 58.693 29.630 0.00 0.00 0.00 2.71
126 127 8.693542 AGCGAATTATCAGGAAAAAGAAATTG 57.306 30.769 0.00 0.00 0.00 2.32
127 128 9.143631 CAAGCGAATTATCAGGAAAAAGAAATT 57.856 29.630 0.00 0.00 0.00 1.82
128 129 8.522830 TCAAGCGAATTATCAGGAAAAAGAAAT 58.477 29.630 0.00 0.00 0.00 2.17
129 130 7.881142 TCAAGCGAATTATCAGGAAAAAGAAA 58.119 30.769 0.00 0.00 0.00 2.52
130 131 7.447374 TCAAGCGAATTATCAGGAAAAAGAA 57.553 32.000 0.00 0.00 0.00 2.52
131 132 7.630242 ATCAAGCGAATTATCAGGAAAAAGA 57.370 32.000 0.00 0.00 0.00 2.52
205 206 6.865726 TGACATGCGCACAAAATATACTTTTT 59.134 30.769 14.90 0.00 0.00 1.94
206 207 6.385843 TGACATGCGCACAAAATATACTTTT 58.614 32.000 14.90 0.00 0.00 2.27
207 208 5.948588 TGACATGCGCACAAAATATACTTT 58.051 33.333 14.90 0.00 0.00 2.66
208 209 5.559427 TGACATGCGCACAAAATATACTT 57.441 34.783 14.90 0.00 0.00 2.24
209 210 5.756195 ATGACATGCGCACAAAATATACT 57.244 34.783 14.90 0.00 0.00 2.12
210 211 7.351981 TCTAATGACATGCGCACAAAATATAC 58.648 34.615 14.90 0.00 0.00 1.47
211 212 7.489574 TCTAATGACATGCGCACAAAATATA 57.510 32.000 14.90 0.00 0.00 0.86
212 213 6.375945 TCTAATGACATGCGCACAAAATAT 57.624 33.333 14.90 0.00 0.00 1.28
213 214 5.809719 TCTAATGACATGCGCACAAAATA 57.190 34.783 14.90 1.00 0.00 1.40
214 215 4.700268 TCTAATGACATGCGCACAAAAT 57.300 36.364 14.90 1.20 0.00 1.82
215 216 4.225984 GTTCTAATGACATGCGCACAAAA 58.774 39.130 14.90 0.00 0.00 2.44
216 217 3.251972 TGTTCTAATGACATGCGCACAAA 59.748 39.130 14.90 0.00 0.00 2.83
217 218 2.810852 TGTTCTAATGACATGCGCACAA 59.189 40.909 14.90 0.00 0.00 3.33
218 219 2.421619 TGTTCTAATGACATGCGCACA 58.578 42.857 14.90 7.02 0.00 4.57
219 220 3.680642 ATGTTCTAATGACATGCGCAC 57.319 42.857 14.90 0.00 0.00 5.34
220 221 3.439825 ACAATGTTCTAATGACATGCGCA 59.560 39.130 14.96 14.96 0.00 6.09
221 222 4.019919 ACAATGTTCTAATGACATGCGC 57.980 40.909 0.00 0.00 0.00 6.09
222 223 5.630061 TGAACAATGTTCTAATGACATGCG 58.370 37.500 24.30 0.00 0.00 4.73
223 224 7.445900 CATGAACAATGTTCTAATGACATGC 57.554 36.000 24.30 0.00 31.83 4.06
306 307 7.279758 TGAACAAGTTTTCCTTTAATTGCTTGG 59.720 33.333 0.00 0.00 37.12 3.61
349 356 9.777297 ACTAAACACTATTCCAAAATTGCATTT 57.223 25.926 0.00 0.00 0.00 2.32
350 357 9.423061 GACTAAACACTATTCCAAAATTGCATT 57.577 29.630 0.00 0.00 0.00 3.56
414 421 4.024048 TGAAGATTTTTCAAGAGGCGTGAC 60.024 41.667 0.00 0.00 0.00 3.67
415 422 4.133820 TGAAGATTTTTCAAGAGGCGTGA 58.866 39.130 0.00 0.00 0.00 4.35
416 423 4.488126 TGAAGATTTTTCAAGAGGCGTG 57.512 40.909 0.00 0.00 0.00 5.34
417 424 5.705441 TGTATGAAGATTTTTCAAGAGGCGT 59.295 36.000 0.00 0.00 31.55 5.68
418 425 6.182039 TGTATGAAGATTTTTCAAGAGGCG 57.818 37.500 0.00 0.00 31.55 5.52
419 426 8.992835 AATTGTATGAAGATTTTTCAAGAGGC 57.007 30.769 0.00 0.00 31.55 4.70
439 446 5.493133 TGCGTAAACACTCTTCAAATTGT 57.507 34.783 0.00 0.00 0.00 2.71
451 458 9.946418 GGACATTTTAAATAAATGCGTAAACAC 57.054 29.630 9.48 0.00 40.35 3.32
497 504 5.923204 TGGGCATTTTTAAAAGTGTGTGAT 58.077 33.333 20.48 0.24 0.00 3.06
502 509 7.061566 ACTACATGGGCATTTTTAAAAGTGT 57.938 32.000 20.48 11.43 0.00 3.55
503 510 7.151308 TGACTACATGGGCATTTTTAAAAGTG 58.849 34.615 16.69 16.69 0.00 3.16
505 512 8.776376 ATTGACTACATGGGCATTTTTAAAAG 57.224 30.769 0.14 0.00 0.00 2.27
508 515 7.473735 TGATTGACTACATGGGCATTTTTAA 57.526 32.000 0.00 0.00 0.00 1.52
517 524 5.473162 TGAACACTTTGATTGACTACATGGG 59.527 40.000 0.00 0.00 0.00 4.00
608 615 9.726034 GCATTTTTAATACGTGAAACTCATTTG 57.274 29.630 0.00 0.00 31.75 2.32
612 619 8.132362 ACAAGCATTTTTAATACGTGAAACTCA 58.868 29.630 0.00 0.00 31.75 3.41
614 621 7.918562 ACACAAGCATTTTTAATACGTGAAACT 59.081 29.630 0.00 0.00 31.75 2.66
619 626 9.936108 CAAATACACAAGCATTTTTAATACGTG 57.064 29.630 0.00 0.00 0.00 4.49
695 703 3.245284 CGTCGACATCAGTGTGTCTTTTT 59.755 43.478 17.16 0.00 44.89 1.94
696 704 2.794910 CGTCGACATCAGTGTGTCTTTT 59.205 45.455 17.16 0.00 44.89 2.27
697 705 2.223735 ACGTCGACATCAGTGTGTCTTT 60.224 45.455 17.16 3.60 44.89 2.52
698 706 1.337071 ACGTCGACATCAGTGTGTCTT 59.663 47.619 17.16 3.84 44.89 3.01
699 707 0.952280 ACGTCGACATCAGTGTGTCT 59.048 50.000 17.16 3.36 44.89 3.41
700 708 1.053048 CACGTCGACATCAGTGTGTC 58.947 55.000 17.16 12.93 43.90 3.67
701 709 0.318699 CCACGTCGACATCAGTGTGT 60.319 55.000 17.16 0.00 39.09 3.72
702 710 0.039527 TCCACGTCGACATCAGTGTG 60.040 55.000 17.16 13.48 39.09 3.82
703 711 0.671796 TTCCACGTCGACATCAGTGT 59.328 50.000 17.16 0.58 42.49 3.55
704 712 1.721389 CTTTCCACGTCGACATCAGTG 59.279 52.381 17.16 14.55 0.00 3.66
705 713 1.935300 GCTTTCCACGTCGACATCAGT 60.935 52.381 17.16 1.80 0.00 3.41
706 714 0.716108 GCTTTCCACGTCGACATCAG 59.284 55.000 17.16 1.08 0.00 2.90
707 715 0.669318 GGCTTTCCACGTCGACATCA 60.669 55.000 17.16 0.00 0.00 3.07
708 716 0.389948 AGGCTTTCCACGTCGACATC 60.390 55.000 17.16 0.00 33.74 3.06
709 717 0.892755 TAGGCTTTCCACGTCGACAT 59.107 50.000 17.16 0.00 33.74 3.06
710 718 0.675083 TTAGGCTTTCCACGTCGACA 59.325 50.000 17.16 0.00 33.74 4.35
711 719 1.066136 GTTAGGCTTTCCACGTCGAC 58.934 55.000 5.18 5.18 33.74 4.20
712 720 0.675083 TGTTAGGCTTTCCACGTCGA 59.325 50.000 0.00 0.00 33.74 4.20
713 721 1.459592 CTTGTTAGGCTTTCCACGTCG 59.540 52.381 0.00 0.00 33.74 5.12
714 722 1.804748 CCTTGTTAGGCTTTCCACGTC 59.195 52.381 0.00 0.00 33.99 4.34
715 723 1.544759 CCCTTGTTAGGCTTTCCACGT 60.545 52.381 0.00 0.00 40.50 4.49
716 724 1.165270 CCCTTGTTAGGCTTTCCACG 58.835 55.000 0.00 0.00 40.50 4.94
717 725 2.579410 TCCCTTGTTAGGCTTTCCAC 57.421 50.000 0.00 0.00 40.50 4.02
718 726 2.355716 CGATCCCTTGTTAGGCTTTCCA 60.356 50.000 0.00 0.00 40.50 3.53
719 727 2.289565 CGATCCCTTGTTAGGCTTTCC 58.710 52.381 0.00 0.00 40.50 3.13
720 728 2.937149 GACGATCCCTTGTTAGGCTTTC 59.063 50.000 0.00 0.00 40.50 2.62
721 729 2.572104 AGACGATCCCTTGTTAGGCTTT 59.428 45.455 0.00 0.00 40.50 3.51
722 730 2.188817 AGACGATCCCTTGTTAGGCTT 58.811 47.619 0.00 0.00 40.50 4.35
723 731 1.867363 AGACGATCCCTTGTTAGGCT 58.133 50.000 0.00 0.00 40.50 4.58
724 732 2.429610 TGTAGACGATCCCTTGTTAGGC 59.570 50.000 0.00 0.00 40.50 3.93
725 733 3.491104 GCTGTAGACGATCCCTTGTTAGG 60.491 52.174 0.00 0.00 41.60 2.69
726 734 3.130516 TGCTGTAGACGATCCCTTGTTAG 59.869 47.826 0.00 0.00 0.00 2.34
727 735 3.093814 TGCTGTAGACGATCCCTTGTTA 58.906 45.455 0.00 0.00 0.00 2.41
728 736 1.899814 TGCTGTAGACGATCCCTTGTT 59.100 47.619 0.00 0.00 0.00 2.83
729 737 1.557099 TGCTGTAGACGATCCCTTGT 58.443 50.000 0.00 0.00 0.00 3.16
730 738 2.672961 TTGCTGTAGACGATCCCTTG 57.327 50.000 0.00 0.00 0.00 3.61
731 739 3.260884 TCTTTTGCTGTAGACGATCCCTT 59.739 43.478 0.00 0.00 0.00 3.95
732 740 2.832129 TCTTTTGCTGTAGACGATCCCT 59.168 45.455 0.00 0.00 0.00 4.20
733 741 3.247006 TCTTTTGCTGTAGACGATCCC 57.753 47.619 0.00 0.00 0.00 3.85
734 742 5.607119 TTTTCTTTTGCTGTAGACGATCC 57.393 39.130 0.00 0.00 0.00 3.36
735 743 6.080406 CCTTTTTCTTTTGCTGTAGACGATC 58.920 40.000 0.00 0.00 0.00 3.69
736 744 5.531287 ACCTTTTTCTTTTGCTGTAGACGAT 59.469 36.000 0.00 0.00 0.00 3.73
737 745 4.879545 ACCTTTTTCTTTTGCTGTAGACGA 59.120 37.500 0.00 0.00 0.00 4.20
738 746 4.970003 CACCTTTTTCTTTTGCTGTAGACG 59.030 41.667 0.00 0.00 0.00 4.18
739 747 6.131544 TCACCTTTTTCTTTTGCTGTAGAC 57.868 37.500 0.00 0.00 0.00 2.59
740 748 6.767524 TTCACCTTTTTCTTTTGCTGTAGA 57.232 33.333 0.00 0.00 0.00 2.59
741 749 9.528018 TTTATTCACCTTTTTCTTTTGCTGTAG 57.472 29.630 0.00 0.00 0.00 2.74
742 750 9.877178 TTTTATTCACCTTTTTCTTTTGCTGTA 57.123 25.926 0.00 0.00 0.00 2.74
743 751 8.785329 TTTTATTCACCTTTTTCTTTTGCTGT 57.215 26.923 0.00 0.00 0.00 4.40
744 752 9.489393 GTTTTTATTCACCTTTTTCTTTTGCTG 57.511 29.630 0.00 0.00 0.00 4.41
745 753 9.448438 AGTTTTTATTCACCTTTTTCTTTTGCT 57.552 25.926 0.00 0.00 0.00 3.91
746 754 9.489393 CAGTTTTTATTCACCTTTTTCTTTTGC 57.511 29.630 0.00 0.00 0.00 3.68
747 755 9.489393 GCAGTTTTTATTCACCTTTTTCTTTTG 57.511 29.630 0.00 0.00 0.00 2.44
748 756 8.387354 CGCAGTTTTTATTCACCTTTTTCTTTT 58.613 29.630 0.00 0.00 0.00 2.27
749 757 7.762159 TCGCAGTTTTTATTCACCTTTTTCTTT 59.238 29.630 0.00 0.00 0.00 2.52
750 758 7.262048 TCGCAGTTTTTATTCACCTTTTTCTT 58.738 30.769 0.00 0.00 0.00 2.52
751 759 6.801575 TCGCAGTTTTTATTCACCTTTTTCT 58.198 32.000 0.00 0.00 0.00 2.52
752 760 7.222031 ACTTCGCAGTTTTTATTCACCTTTTTC 59.778 33.333 0.00 0.00 0.00 2.29
753 761 7.010091 CACTTCGCAGTTTTTATTCACCTTTTT 59.990 33.333 0.00 0.00 0.00 1.94
754 762 6.475402 CACTTCGCAGTTTTTATTCACCTTTT 59.525 34.615 0.00 0.00 0.00 2.27
755 763 5.977129 CACTTCGCAGTTTTTATTCACCTTT 59.023 36.000 0.00 0.00 0.00 3.11
756 764 5.507315 CCACTTCGCAGTTTTTATTCACCTT 60.507 40.000 0.00 0.00 0.00 3.50
757 765 4.023193 CCACTTCGCAGTTTTTATTCACCT 60.023 41.667 0.00 0.00 0.00 4.00
758 766 4.226761 CCACTTCGCAGTTTTTATTCACC 58.773 43.478 0.00 0.00 0.00 4.02
759 767 4.226761 CCCACTTCGCAGTTTTTATTCAC 58.773 43.478 0.00 0.00 0.00 3.18
770 778 2.892425 GATCGGCCCACTTCGCAG 60.892 66.667 0.00 0.00 0.00 5.18
771 779 4.467084 GGATCGGCCCACTTCGCA 62.467 66.667 0.00 0.00 0.00 5.10
796 804 3.855895 GCCGTCTTATTCGTATAGCAGCA 60.856 47.826 0.00 0.00 0.00 4.41
797 805 2.662156 GCCGTCTTATTCGTATAGCAGC 59.338 50.000 0.00 0.00 0.00 5.25
798 806 3.243336 GGCCGTCTTATTCGTATAGCAG 58.757 50.000 0.00 0.00 0.00 4.24
799 807 2.029649 GGGCCGTCTTATTCGTATAGCA 60.030 50.000 0.00 0.00 0.00 3.49
800 808 2.603953 GGGCCGTCTTATTCGTATAGC 58.396 52.381 0.00 0.00 0.00 2.97
801 809 2.227388 ACGGGCCGTCTTATTCGTATAG 59.773 50.000 28.83 0.00 33.69 1.31
810 818 1.549203 AGTTCTAACGGGCCGTCTTA 58.451 50.000 34.23 20.84 39.99 2.10
818 826 6.405397 CCCAATTTGGAAATAGTTCTAACGGG 60.405 42.308 17.24 12.77 40.96 5.28
877 885 0.759060 GTTTTCCCCACTGGTTGGCT 60.759 55.000 0.00 0.00 45.37 4.75
1368 1394 5.047802 CCAAAGATGCTACAGGACAAACAAT 60.048 40.000 0.00 0.00 0.00 2.71
1402 1428 0.600255 CGAGGCCGAACAAGAACAGT 60.600 55.000 0.00 0.00 38.22 3.55
1815 1841 7.054124 CAGAGGCAGTTCCCTATTAAACATAA 58.946 38.462 0.00 0.00 34.69 1.90
1894 1920 6.150976 ACATCAAAATGCAAACGGAATAGAGA 59.849 34.615 0.00 0.00 36.26 3.10
2008 2036 8.682936 AAGTTGCCCTATAAGATTTACTGATG 57.317 34.615 0.00 0.00 0.00 3.07
2195 2223 2.309136 ATAAGCAAAGGCCAGTTGGT 57.691 45.000 15.84 15.84 42.56 3.67
2245 2273 4.380233 GCCCATGACAAATCTTCTTGTGAG 60.380 45.833 0.00 0.00 39.63 3.51
2280 2308 9.965902 AGTGATATTGGTTCTTAGAATGAAGTT 57.034 29.630 0.00 0.00 0.00 2.66
2384 2412 6.315642 ACAAATCAGAGCACATAGATCTTGTG 59.684 38.462 22.94 22.94 40.91 3.33
2500 2549 8.798859 AAAAGTATGAGTAAGCTGTCAATGAT 57.201 30.769 0.00 0.00 0.00 2.45
2637 2686 4.261322 CCGTGCATGGGAAAGATAAATCTG 60.261 45.833 17.90 0.00 37.19 2.90
2658 2707 4.989279 AGAAATTCAATTCATGGTCCCG 57.011 40.909 0.00 0.00 0.00 5.14
2787 2836 7.298374 GGGGGAAATAGGAGAATTTCAGTATT 58.702 38.462 10.50 0.00 44.28 1.89
2855 2904 5.224888 CAGAATTTTGTTGGACCATGTCAG 58.775 41.667 0.00 0.00 33.68 3.51
3461 3519 5.005740 CCAACTTCTCAAGATTCATGTGGA 58.994 41.667 0.00 0.00 0.00 4.02
3487 3545 8.256356 AGATACCTAACAGAAGTTGCATAGAT 57.744 34.615 0.00 0.00 38.69 1.98
3543 3609 4.187694 CAGCACTTCTCTTCCTAACATCC 58.812 47.826 0.00 0.00 0.00 3.51
3579 3645 8.750515 TGCCAATATCATTAACAATCTTCAGA 57.249 30.769 0.00 0.00 0.00 3.27
3598 3664 7.640313 AGGTATGAGATTATGATGATGCCAAT 58.360 34.615 0.00 0.00 0.00 3.16
3613 3696 4.756564 TGCTCCTATGGAAGGTATGAGAT 58.243 43.478 0.00 0.00 46.62 2.75
3673 3756 8.836413 TCAATGTTGTTAGTCTAGAAAAACAGG 58.164 33.333 16.46 7.32 33.70 4.00
3721 3806 5.500234 AGCTACCTTGCATTTGATTACAGA 58.500 37.500 0.00 0.00 34.99 3.41
3722 3807 5.220931 GGAGCTACCTTGCATTTGATTACAG 60.221 44.000 0.00 0.00 35.41 2.74
3723 3808 4.640201 GGAGCTACCTTGCATTTGATTACA 59.360 41.667 0.00 0.00 35.41 2.41
3724 3809 4.640201 TGGAGCTACCTTGCATTTGATTAC 59.360 41.667 0.00 0.00 39.86 1.89
3728 3813 2.436417 GTGGAGCTACCTTGCATTTGA 58.564 47.619 0.00 0.00 39.86 2.69
3752 3837 5.895636 ACATGCTATTGGATTTCACGAAA 57.104 34.783 0.00 0.00 34.46 3.46
3846 3955 3.713288 TGAACTACACGAACTTCACAGG 58.287 45.455 0.00 0.00 0.00 4.00
3858 3971 6.865205 AGTACGAAACAAGGTATGAACTACAC 59.135 38.462 0.00 0.00 31.44 2.90
3912 4025 2.202946 TTGCAACACGCGTCCAGA 60.203 55.556 9.86 0.00 46.97 3.86
3920 4033 3.425193 GCCTGAAAAATAGTTGCAACACG 59.575 43.478 30.11 7.91 0.00 4.49
3930 4043 5.984926 TGCAAAAGAACAGCCTGAAAAATAG 59.015 36.000 0.00 0.00 0.00 1.73
3937 4050 1.677576 CAGTGCAAAAGAACAGCCTGA 59.322 47.619 0.00 0.00 32.16 3.86
3947 4060 4.331356 GCAGGTGCAGTGCAAAAG 57.669 55.556 21.67 13.18 41.47 2.27
3964 4077 6.742718 CGAACTATTGGTGAAAAGCATACTTG 59.257 38.462 0.00 0.00 35.85 3.16
3965 4078 6.430000 ACGAACTATTGGTGAAAAGCATACTT 59.570 34.615 0.00 0.00 37.90 2.24
3966 4079 5.938125 ACGAACTATTGGTGAAAAGCATACT 59.062 36.000 0.00 0.00 0.00 2.12
3972 4085 5.625311 GCAAGAACGAACTATTGGTGAAAAG 59.375 40.000 0.00 0.00 0.00 2.27
3989 4102 6.640499 TGTAGCATTTACATGTTTGCAAGAAC 59.360 34.615 22.31 16.32 37.56 3.01
4087 4200 4.440103 GCGACAATGTACAATAGTAGACCG 59.560 45.833 0.00 0.53 0.00 4.79
4099 4212 1.393539 AGATTGCGTGCGACAATGTAC 59.606 47.619 14.97 0.00 37.85 2.90
4105 4218 1.428370 GCCATAGATTGCGTGCGACA 61.428 55.000 0.00 0.00 0.00 4.35
4108 4221 2.246397 CGCCATAGATTGCGTGCG 59.754 61.111 0.11 0.00 45.43 5.34
4148 4261 6.486993 CACCAATGATCATCAGATTCAGACAT 59.513 38.462 9.06 0.00 33.72 3.06
4272 4385 4.758251 TGGTGATGGACGCGCAGG 62.758 66.667 5.73 0.00 0.00 4.85



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.