Multiple sequence alignment - TraesCS6D01G251200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G251200 chr6D 100.000 3299 0 0 1 3299 354993549 354990251 0.000000e+00 6093.0
1 TraesCS6D01G251200 chr6D 87.393 349 38 4 2952 3298 56836500 56836844 2.390000e-106 396.0
2 TraesCS6D01G251200 chr6A 94.033 2145 80 21 523 2640 486840293 486842416 0.000000e+00 3208.0
3 TraesCS6D01G251200 chr6A 89.412 340 26 8 1 331 486839948 486840286 1.420000e-113 420.0
4 TraesCS6D01G251200 chr6A 87.390 341 39 2 2952 3289 593230809 593231148 3.990000e-104 388.0
5 TraesCS6D01G251200 chr6A 81.633 98 18 0 2841 2938 551627523 551627426 7.590000e-12 82.4
6 TraesCS6D01G251200 chr6B 94.450 1964 84 14 890 2843 523064678 523066626 0.000000e+00 3000.0
7 TraesCS6D01G251200 chr6B 87.143 630 54 8 2215 2843 523066980 523067583 0.000000e+00 689.0
8 TraesCS6D01G251200 chr6B 95.122 410 12 4 515 919 523064265 523064671 9.980000e-180 640.0
9 TraesCS6D01G251200 chr6B 88.825 349 34 4 2952 3296 136362135 136362482 1.090000e-114 424.0
10 TraesCS6D01G251200 chr6B 85.854 205 10 7 132 318 523063770 523063973 2.010000e-47 200.0
11 TraesCS6D01G251200 chr2D 78.527 964 174 20 1339 2281 559311644 559310693 1.310000e-168 603.0
12 TraesCS6D01G251200 chr2D 87.500 248 29 2 1006 1252 559311932 559311686 5.390000e-73 285.0
13 TraesCS6D01G251200 chr2D 91.908 173 14 0 333 505 194458780 194458608 3.290000e-60 243.0
14 TraesCS6D01G251200 chr2D 94.595 37 2 0 2720 2756 565588914 565588878 1.280000e-04 58.4
15 TraesCS6D01G251200 chr2B 78.208 982 184 19 1339 2299 668377977 668377005 4.710000e-168 601.0
16 TraesCS6D01G251200 chr2B 86.508 252 32 2 1007 1257 668378261 668378011 3.240000e-70 276.0
17 TraesCS6D01G251200 chr2B 79.832 119 21 3 2835 2951 796537747 796537864 2.110000e-12 84.2
18 TraesCS6D01G251200 chr2A 77.927 965 181 21 1339 2281 699868613 699867659 1.030000e-159 573.0
19 TraesCS6D01G251200 chr2A 86.056 251 31 4 1006 1254 699868895 699868647 1.950000e-67 267.0
20 TraesCS6D01G251200 chr2A 83.784 74 12 0 95 168 642716267 642716194 1.640000e-08 71.3
21 TraesCS6D01G251200 chr1A 88.571 350 35 3 2952 3296 464089779 464090128 1.420000e-113 420.0
22 TraesCS6D01G251200 chr1A 91.429 70 6 0 2774 2843 398664866 398664935 2.710000e-16 97.1
23 TraesCS6D01G251200 chr3D 88.596 342 39 0 2952 3293 398411131 398411472 1.830000e-112 416.0
24 TraesCS6D01G251200 chr3D 81.197 117 22 0 2843 2959 352393791 352393675 9.750000e-16 95.3
25 TraesCS6D01G251200 chr3D 88.571 70 8 0 2843 2912 441584161 441584230 5.870000e-13 86.1
26 TraesCS6D01G251200 chr7D 87.931 348 33 5 2952 3296 159709911 159709570 5.130000e-108 401.0
27 TraesCS6D01G251200 chr7D 95.238 63 3 0 2781 2843 581088323 581088261 2.090000e-17 100.0
28 TraesCS6D01G251200 chr7D 88.889 54 6 0 2843 2896 603850867 603850814 2.120000e-07 67.6
29 TraesCS6D01G251200 chr7B 87.032 347 32 5 2952 3296 328179048 328178713 2.400000e-101 379.0
30 TraesCS6D01G251200 chr7B 93.452 168 11 0 329 496 678205607 678205440 1.970000e-62 250.0
31 TraesCS6D01G251200 chr7B 94.444 36 2 0 128 163 113774051 113774016 4.600000e-04 56.5
32 TraesCS6D01G251200 chr5B 86.275 357 40 4 2948 3296 447783824 447783469 2.400000e-101 379.0
33 TraesCS6D01G251200 chr5B 95.238 63 3 0 2781 2843 528031101 528031163 2.090000e-17 100.0
34 TraesCS6D01G251200 chr5B 81.250 96 17 1 2843 2938 577526799 577526705 3.530000e-10 76.8
35 TraesCS6D01G251200 chr1D 87.463 335 33 6 2955 3289 397634000 397633675 8.640000e-101 377.0
36 TraesCS6D01G251200 chr5D 96.203 158 6 0 333 490 113683081 113683238 3.270000e-65 259.0
37 TraesCS6D01G251200 chr5D 93.605 172 9 2 333 504 66671786 66671955 4.220000e-64 255.0
38 TraesCS6D01G251200 chr5D 100.000 29 0 0 3 31 407507734 407507762 2.000000e-03 54.7
39 TraesCS6D01G251200 chr1B 93.103 174 11 1 326 499 492367943 492368115 1.520000e-63 254.0
40 TraesCS6D01G251200 chrUn 93.023 172 12 0 330 501 74119449 74119620 5.460000e-63 252.0
41 TraesCS6D01G251200 chr7A 93.023 172 12 0 329 500 17670942 17670771 5.460000e-63 252.0
42 TraesCS6D01G251200 chr7A 94.545 55 3 0 2843 2897 41809712 41809658 5.870000e-13 86.1
43 TraesCS6D01G251200 chr3B 92.486 173 12 1 325 496 669602532 669602360 2.540000e-61 246.0
44 TraesCS6D01G251200 chr3B 94.000 50 3 0 2906 2955 2268850 2268899 3.530000e-10 76.8
45 TraesCS6D01G251200 chr3B 86.154 65 9 0 95 159 568393631 568393567 1.640000e-08 71.3
46 TraesCS6D01G251200 chr3B 84.375 64 10 0 105 168 51148562 51148499 2.750000e-06 63.9
47 TraesCS6D01G251200 chr4B 93.333 165 11 0 326 490 512755242 512755406 9.140000e-61 244.0
48 TraesCS6D01G251200 chr4D 83.761 117 19 0 2843 2959 13045445 13045561 9.680000e-21 111.0
49 TraesCS6D01G251200 chr4D 95.238 63 3 0 2781 2843 16749688 16749750 2.090000e-17 100.0
50 TraesCS6D01G251200 chr5A 84.685 111 15 2 2843 2952 593249438 593249547 3.480000e-20 110.0
51 TraesCS6D01G251200 chr5A 83.065 124 15 4 2723 2843 599553226 599553106 1.250000e-19 108.0
52 TraesCS6D01G251200 chr3A 95.238 63 3 0 2781 2843 472901833 472901771 2.090000e-17 100.0
53 TraesCS6D01G251200 chr3A 82.500 80 10 3 2714 2792 81670335 81670411 2.120000e-07 67.6
54 TraesCS6D01G251200 chr4A 81.356 118 16 6 2729 2843 198192587 198192473 1.260000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G251200 chr6D 354990251 354993549 3298 True 6093.00 6093 100.00000 1 3299 1 chr6D.!!$R1 3298
1 TraesCS6D01G251200 chr6A 486839948 486842416 2468 False 1814.00 3208 91.72250 1 2640 2 chr6A.!!$F2 2639
2 TraesCS6D01G251200 chr6B 523063770 523067583 3813 False 1132.25 3000 90.64225 132 2843 4 chr6B.!!$F2 2711
3 TraesCS6D01G251200 chr2D 559310693 559311932 1239 True 444.00 603 83.01350 1006 2281 2 chr2D.!!$R3 1275
4 TraesCS6D01G251200 chr2B 668377005 668378261 1256 True 438.50 601 82.35800 1007 2299 2 chr2B.!!$R1 1292
5 TraesCS6D01G251200 chr2A 699867659 699868895 1236 True 420.00 573 81.99150 1006 2281 2 chr2A.!!$R2 1275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
229 256 1.004044 CCAGGTGTCATTCTCAGGCTT 59.996 52.381 0.0 0.0 0.0 4.35 F
557 683 1.217882 ACTTGAAACGGAACAGCGAG 58.782 50.000 0.0 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1243 1435 0.256464 GAAGACGAGGAGGAGGAGGA 59.744 60.000 0.0 0.0 0.00 3.71 R
2452 2669 1.133853 AGAGGGAATGATGCTCTTGCC 60.134 52.381 0.0 0.0 38.71 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.946157 TCTTTACCGAGGGAGTACTTACTG 59.054 45.833 0.00 0.00 36.50 2.74
47 48 2.555757 ACTGGCAGAGAATTTTGAGTGC 59.444 45.455 23.66 0.00 0.00 4.40
51 52 3.080319 GCAGAGAATTTTGAGTGCCTCT 58.920 45.455 4.21 0.00 0.00 3.69
52 53 4.256920 GCAGAGAATTTTGAGTGCCTCTA 58.743 43.478 0.00 0.00 30.69 2.43
85 86 9.790344 CAGAGGGTCTAATAAATCAATGAATCT 57.210 33.333 0.00 0.00 0.00 2.40
88 89 9.790344 AGGGTCTAATAAATCAATGAATCTCAG 57.210 33.333 0.00 0.00 0.00 3.35
90 91 9.784531 GGTCTAATAAATCAATGAATCTCAGGA 57.215 33.333 0.00 0.00 0.00 3.86
111 112 9.069082 TCAGGAACTCGGTTTTTCATTAATTAA 57.931 29.630 0.00 0.00 34.60 1.40
181 208 7.938563 TGATTCTGTTTAAATTTTTGTCCGG 57.061 32.000 0.00 0.00 0.00 5.14
182 209 7.493367 TGATTCTGTTTAAATTTTTGTCCGGT 58.507 30.769 0.00 0.00 0.00 5.28
229 256 1.004044 CCAGGTGTCATTCTCAGGCTT 59.996 52.381 0.00 0.00 0.00 4.35
278 306 2.391130 TTCAGGTGCCACCAACCCT 61.391 57.895 17.80 0.00 41.95 4.34
305 333 3.831715 ACGAATGCTGCTACCTTTTTC 57.168 42.857 0.00 0.00 0.00 2.29
340 368 1.622312 ACGAAAGTTACCACTCCCTCC 59.378 52.381 0.00 0.00 46.40 4.30
342 370 1.622312 GAAAGTTACCACTCCCTCCGT 59.378 52.381 0.00 0.00 30.45 4.69
343 371 1.725803 AAGTTACCACTCCCTCCGTT 58.274 50.000 0.00 0.00 30.45 4.44
346 374 1.553704 GTTACCACTCCCTCCGTTCAT 59.446 52.381 0.00 0.00 0.00 2.57
347 375 2.762327 GTTACCACTCCCTCCGTTCATA 59.238 50.000 0.00 0.00 0.00 2.15
350 378 2.844348 ACCACTCCCTCCGTTCATAAAT 59.156 45.455 0.00 0.00 0.00 1.40
353 381 5.132144 ACCACTCCCTCCGTTCATAAATATT 59.868 40.000 0.00 0.00 0.00 1.28
354 382 6.062095 CCACTCCCTCCGTTCATAAATATTT 58.938 40.000 5.89 5.89 0.00 1.40
355 383 6.017109 CCACTCCCTCCGTTCATAAATATTTG 60.017 42.308 11.05 0.00 0.00 2.32
356 384 6.542370 CACTCCCTCCGTTCATAAATATTTGT 59.458 38.462 11.05 0.84 0.00 2.83
358 386 7.614192 ACTCCCTCCGTTCATAAATATTTGTTT 59.386 33.333 11.05 0.00 0.00 2.83
359 387 8.356000 TCCCTCCGTTCATAAATATTTGTTTT 57.644 30.769 11.05 0.00 0.00 2.43
361 389 9.083080 CCCTCCGTTCATAAATATTTGTTTTTC 57.917 33.333 11.05 0.00 0.00 2.29
362 390 9.855021 CCTCCGTTCATAAATATTTGTTTTTCT 57.145 29.630 11.05 0.00 0.00 2.52
380 408 9.883142 TGTTTTTCTAAACATTTCAAATGGACT 57.117 25.926 14.70 1.17 46.46 3.85
383 411 9.974980 TTTTCTAAACATTTCAAATGGACTACC 57.025 29.630 14.70 0.00 0.00 3.18
396 424 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
397 425 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
434 496 6.259550 AGAGTGTAGGTTCATTCATTTTGC 57.740 37.500 0.00 0.00 0.00 3.68
435 497 6.006449 AGAGTGTAGGTTCATTCATTTTGCT 58.994 36.000 0.00 0.00 0.00 3.91
436 498 6.491403 AGAGTGTAGGTTCATTCATTTTGCTT 59.509 34.615 0.00 0.00 0.00 3.91
437 499 7.014615 AGAGTGTAGGTTCATTCATTTTGCTTT 59.985 33.333 0.00 0.00 0.00 3.51
438 500 6.925165 AGTGTAGGTTCATTCATTTTGCTTTG 59.075 34.615 0.00 0.00 0.00 2.77
439 501 6.701400 GTGTAGGTTCATTCATTTTGCTTTGT 59.299 34.615 0.00 0.00 0.00 2.83
440 502 7.865385 GTGTAGGTTCATTCATTTTGCTTTGTA 59.135 33.333 0.00 0.00 0.00 2.41
441 503 8.584157 TGTAGGTTCATTCATTTTGCTTTGTAT 58.416 29.630 0.00 0.00 0.00 2.29
442 504 7.894376 AGGTTCATTCATTTTGCTTTGTATG 57.106 32.000 0.00 0.00 0.00 2.39
443 505 7.444299 AGGTTCATTCATTTTGCTTTGTATGT 58.556 30.769 0.00 0.00 0.00 2.29
445 507 8.863049 GGTTCATTCATTTTGCTTTGTATGTAG 58.137 33.333 0.00 0.00 0.00 2.74
446 508 9.410556 GTTCATTCATTTTGCTTTGTATGTAGT 57.589 29.630 0.00 0.00 0.00 2.73
447 509 9.624697 TTCATTCATTTTGCTTTGTATGTAGTC 57.375 29.630 0.00 0.00 0.00 2.59
448 510 8.791675 TCATTCATTTTGCTTTGTATGTAGTCA 58.208 29.630 0.00 0.00 0.00 3.41
450 512 7.744087 TCATTTTGCTTTGTATGTAGTCACT 57.256 32.000 0.00 0.00 0.00 3.41
451 513 8.165239 TCATTTTGCTTTGTATGTAGTCACTT 57.835 30.769 0.00 0.00 0.00 3.16
454 516 6.935741 TTGCTTTGTATGTAGTCACTTGTT 57.064 33.333 0.00 0.00 0.00 2.83
455 517 6.299023 TGCTTTGTATGTAGTCACTTGTTG 57.701 37.500 0.00 0.00 0.00 3.33
456 518 6.052360 TGCTTTGTATGTAGTCACTTGTTGA 58.948 36.000 0.00 0.00 0.00 3.18
457 519 6.540551 TGCTTTGTATGTAGTCACTTGTTGAA 59.459 34.615 0.00 0.00 35.39 2.69
458 520 7.066404 TGCTTTGTATGTAGTCACTTGTTGAAA 59.934 33.333 0.00 0.00 35.39 2.69
459 521 8.076178 GCTTTGTATGTAGTCACTTGTTGAAAT 58.924 33.333 0.00 0.00 35.39 2.17
487 549 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
489 551 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
490 552 8.319146 AGAAAGACAAATATTTAGGAACGGAGA 58.681 33.333 0.00 0.00 0.00 3.71
491 553 8.494016 AAAGACAAATATTTAGGAACGGAGAG 57.506 34.615 0.00 0.00 0.00 3.20
492 554 6.583562 AGACAAATATTTAGGAACGGAGAGG 58.416 40.000 0.00 0.00 0.00 3.69
493 555 5.681639 ACAAATATTTAGGAACGGAGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
496 558 6.416631 AATATTTAGGAACGGAGAGGGTAC 57.583 41.667 0.00 0.00 0.00 3.34
497 559 3.463048 TTTAGGAACGGAGAGGGTACT 57.537 47.619 0.00 0.00 0.00 2.73
501 563 1.477295 GGAACGGAGAGGGTACTTGAG 59.523 57.143 0.00 0.00 0.00 3.02
502 564 2.169330 GAACGGAGAGGGTACTTGAGT 58.831 52.381 0.00 0.00 0.00 3.41
503 565 3.350833 GAACGGAGAGGGTACTTGAGTA 58.649 50.000 0.00 0.00 0.00 2.59
504 566 3.666345 ACGGAGAGGGTACTTGAGTAT 57.334 47.619 0.00 0.00 32.54 2.12
505 567 4.785346 ACGGAGAGGGTACTTGAGTATA 57.215 45.455 0.00 0.00 32.54 1.47
506 568 4.716794 ACGGAGAGGGTACTTGAGTATAG 58.283 47.826 0.00 0.00 32.54 1.31
508 570 5.073417 ACGGAGAGGGTACTTGAGTATAGAT 59.927 44.000 0.00 0.00 32.54 1.98
511 573 6.431852 GGAGAGGGTACTTGAGTATAGATCAC 59.568 46.154 0.00 0.00 32.54 3.06
512 574 7.156694 AGAGGGTACTTGAGTATAGATCACT 57.843 40.000 0.00 0.00 32.54 3.41
513 575 7.588169 AGAGGGTACTTGAGTATAGATCACTT 58.412 38.462 0.00 0.00 32.54 3.16
557 683 1.217882 ACTTGAAACGGAACAGCGAG 58.782 50.000 0.00 0.00 0.00 5.03
572 698 3.312973 ACAGCGAGTAGGTATCTTCTTCG 59.687 47.826 0.00 0.00 0.00 3.79
646 773 3.214328 CCCATATCCCCTTGTTTTCTCG 58.786 50.000 0.00 0.00 0.00 4.04
946 1129 6.042777 CGCATCATTTCTACTCCTACTTCAA 58.957 40.000 0.00 0.00 0.00 2.69
2044 2257 1.375908 GTGGCGAGGACAATGCTGA 60.376 57.895 0.00 0.00 0.00 4.26
2309 2525 6.150976 AGGTTGCTCGATTGATTTGTTCATTA 59.849 34.615 0.00 0.00 33.34 1.90
2313 2529 7.243487 TGCTCGATTGATTTGTTCATTAGTTC 58.757 34.615 0.00 0.00 33.34 3.01
2317 2533 7.606073 TCGATTGATTTGTTCATTAGTTCCAGA 59.394 33.333 0.00 0.00 33.34 3.86
2593 3763 1.014352 ATCATAAACCAAGCGCCGTC 58.986 50.000 2.29 0.00 0.00 4.79
2606 3776 2.984466 CCGTCGCACGAATACACG 59.016 61.111 9.75 0.00 46.05 4.49
2608 3778 2.693285 GTCGCACGAATACACGGC 59.307 61.111 0.00 0.00 37.61 5.68
2611 3781 2.092291 CGCACGAATACACGGCACT 61.092 57.895 0.00 0.00 37.61 4.40
2644 3814 4.640364 TCGATCCTATGCATTGCAACATA 58.360 39.130 16.46 5.41 43.62 2.29
2648 3818 6.307077 CGATCCTATGCATTGCAACATATTTG 59.693 38.462 16.46 0.00 43.62 2.32
2673 3843 6.425504 GCATCTCGAATTTCCAGTGATTAAG 58.574 40.000 0.00 0.00 0.00 1.85
2677 3847 9.667107 ATCTCGAATTTCCAGTGATTAAGTTTA 57.333 29.630 0.00 0.00 0.00 2.01
2678 3848 9.667107 TCTCGAATTTCCAGTGATTAAGTTTAT 57.333 29.630 0.00 0.00 0.00 1.40
2679 3849 9.922305 CTCGAATTTCCAGTGATTAAGTTTATC 57.078 33.333 0.00 0.00 0.00 1.75
2680 3850 9.443323 TCGAATTTCCAGTGATTAAGTTTATCA 57.557 29.630 0.45 0.45 0.00 2.15
2681 3851 9.490663 CGAATTTCCAGTGATTAAGTTTATCAC 57.509 33.333 21.79 21.79 43.53 3.06
2726 3897 9.668497 AAAGAGGAGGTAATGATGTAACTTTAC 57.332 33.333 0.00 0.00 32.99 2.01
2727 3898 8.611051 AGAGGAGGTAATGATGTAACTTTACT 57.389 34.615 1.04 0.00 34.77 2.24
2816 3987 7.969536 TGAACGTAGTAACTTAGACTAGTGT 57.030 36.000 0.00 0.00 45.00 3.55
2846 4017 7.426410 TGCATGACACTACTATAAGTTAGAGC 58.574 38.462 4.42 0.00 0.00 4.09
2847 4018 7.068226 TGCATGACACTACTATAAGTTAGAGCA 59.932 37.037 4.42 0.00 0.00 4.26
2848 4019 8.085296 GCATGACACTACTATAAGTTAGAGCAT 58.915 37.037 4.42 0.00 0.00 3.79
2849 4020 9.619316 CATGACACTACTATAAGTTAGAGCATC 57.381 37.037 4.42 0.00 0.00 3.91
2863 4034 3.512033 GAGCATCTACAGTCGGACTTT 57.488 47.619 8.18 4.82 0.00 2.66
2864 4035 3.182967 GAGCATCTACAGTCGGACTTTG 58.817 50.000 8.18 1.64 0.00 2.77
2865 4036 1.661112 GCATCTACAGTCGGACTTTGC 59.339 52.381 8.18 9.04 0.00 3.68
2866 4037 2.930887 GCATCTACAGTCGGACTTTGCA 60.931 50.000 8.18 0.00 0.00 4.08
2867 4038 3.325870 CATCTACAGTCGGACTTTGCAA 58.674 45.455 8.18 0.00 0.00 4.08
2868 4039 3.462483 TCTACAGTCGGACTTTGCAAA 57.538 42.857 12.14 12.14 0.00 3.68
2869 4040 4.002906 TCTACAGTCGGACTTTGCAAAT 57.997 40.909 13.23 3.03 0.00 2.32
2870 4041 3.994392 TCTACAGTCGGACTTTGCAAATC 59.006 43.478 13.23 11.89 0.00 2.17
2871 4042 1.880027 ACAGTCGGACTTTGCAAATCC 59.120 47.619 21.35 21.35 0.00 3.01
2876 4047 0.526211 GGACTTTGCAAATCCGGTCC 59.474 55.000 24.31 24.31 36.83 4.46
2877 4048 0.526211 GACTTTGCAAATCCGGTCCC 59.474 55.000 13.23 0.00 0.00 4.46
2878 4049 0.898326 ACTTTGCAAATCCGGTCCCC 60.898 55.000 13.23 0.00 0.00 4.81
2879 4050 1.604147 CTTTGCAAATCCGGTCCCCC 61.604 60.000 13.23 0.00 0.00 5.40
2934 4105 4.728102 CCGACCGTGCACGCCTTA 62.728 66.667 33.17 0.00 38.18 2.69
2935 4106 2.735478 CGACCGTGCACGCCTTAA 60.735 61.111 33.17 0.00 38.18 1.85
2936 4107 2.311701 CGACCGTGCACGCCTTAAA 61.312 57.895 33.17 0.00 38.18 1.52
2937 4108 1.632046 CGACCGTGCACGCCTTAAAT 61.632 55.000 33.17 11.51 38.18 1.40
2938 4109 0.519961 GACCGTGCACGCCTTAAATT 59.480 50.000 33.17 8.92 38.18 1.82
2939 4110 1.733360 GACCGTGCACGCCTTAAATTA 59.267 47.619 33.17 0.00 38.18 1.40
2940 4111 1.735571 ACCGTGCACGCCTTAAATTAG 59.264 47.619 33.17 17.41 38.18 1.73
2941 4112 1.531058 CCGTGCACGCCTTAAATTAGC 60.531 52.381 33.17 0.00 38.18 3.09
2942 4113 1.531058 CGTGCACGCCTTAAATTAGCC 60.531 52.381 28.16 0.00 0.00 3.93
2943 4114 1.470890 GTGCACGCCTTAAATTAGCCA 59.529 47.619 0.00 0.00 0.00 4.75
2944 4115 1.470890 TGCACGCCTTAAATTAGCCAC 59.529 47.619 0.00 0.00 0.00 5.01
2945 4116 1.743394 GCACGCCTTAAATTAGCCACT 59.257 47.619 0.00 0.00 0.00 4.00
2946 4117 2.163613 GCACGCCTTAAATTAGCCACTT 59.836 45.455 0.00 0.00 0.00 3.16
2947 4118 3.366985 GCACGCCTTAAATTAGCCACTTT 60.367 43.478 0.00 0.00 0.00 2.66
2948 4119 4.165779 CACGCCTTAAATTAGCCACTTTG 58.834 43.478 0.00 0.00 0.00 2.77
2949 4120 3.179048 CGCCTTAAATTAGCCACTTTGC 58.821 45.455 0.00 0.00 0.00 3.68
2950 4121 3.366883 CGCCTTAAATTAGCCACTTTGCA 60.367 43.478 0.00 0.00 0.00 4.08
2951 4122 4.677779 CGCCTTAAATTAGCCACTTTGCAT 60.678 41.667 0.00 0.00 0.00 3.96
2952 4123 4.805719 GCCTTAAATTAGCCACTTTGCATC 59.194 41.667 0.00 0.00 0.00 3.91
2953 4124 5.351458 CCTTAAATTAGCCACTTTGCATCC 58.649 41.667 0.00 0.00 0.00 3.51
2954 4125 3.508744 AAATTAGCCACTTTGCATCCG 57.491 42.857 0.00 0.00 0.00 4.18
2955 4126 1.392589 ATTAGCCACTTTGCATCCGG 58.607 50.000 0.00 0.00 0.00 5.14
2956 4127 1.312371 TTAGCCACTTTGCATCCGGC 61.312 55.000 0.00 8.47 43.31 6.13
2957 4128 3.064324 GCCACTTTGCATCCGGCT 61.064 61.111 0.00 0.00 45.15 5.52
2958 4129 3.056313 GCCACTTTGCATCCGGCTC 62.056 63.158 0.00 0.00 45.15 4.70
2959 4130 1.675310 CCACTTTGCATCCGGCTCA 60.675 57.895 0.00 0.00 45.15 4.26
2960 4131 1.033746 CCACTTTGCATCCGGCTCAT 61.034 55.000 0.00 0.00 45.15 2.90
2961 4132 0.379669 CACTTTGCATCCGGCTCATC 59.620 55.000 0.00 0.00 45.15 2.92
2962 4133 0.749454 ACTTTGCATCCGGCTCATCC 60.749 55.000 0.00 0.00 45.15 3.51
2963 4134 0.749091 CTTTGCATCCGGCTCATCCA 60.749 55.000 0.00 0.00 45.15 3.41
2964 4135 1.031571 TTTGCATCCGGCTCATCCAC 61.032 55.000 0.00 0.00 45.15 4.02
2965 4136 2.592861 GCATCCGGCTCATCCACC 60.593 66.667 0.00 0.00 40.25 4.61
2966 4137 3.112205 GCATCCGGCTCATCCACCT 62.112 63.158 0.00 0.00 40.25 4.00
2967 4138 1.070445 CATCCGGCTCATCCACCTC 59.930 63.158 0.00 0.00 34.01 3.85
2968 4139 2.143419 ATCCGGCTCATCCACCTCC 61.143 63.158 0.00 0.00 34.01 4.30
2969 4140 2.611964 ATCCGGCTCATCCACCTCCT 62.612 60.000 0.00 0.00 34.01 3.69
2970 4141 2.503061 CGGCTCATCCACCTCCTG 59.497 66.667 0.00 0.00 34.01 3.86
2971 4142 2.191641 GGCTCATCCACCTCCTGC 59.808 66.667 0.00 0.00 34.01 4.85
2972 4143 2.373707 GGCTCATCCACCTCCTGCT 61.374 63.158 0.00 0.00 34.01 4.24
2973 4144 1.145819 GCTCATCCACCTCCTGCTC 59.854 63.158 0.00 0.00 0.00 4.26
2974 4145 1.440893 CTCATCCACCTCCTGCTCG 59.559 63.158 0.00 0.00 0.00 5.03
2975 4146 1.000359 TCATCCACCTCCTGCTCGA 60.000 57.895 0.00 0.00 0.00 4.04
2976 4147 1.142748 CATCCACCTCCTGCTCGAC 59.857 63.158 0.00 0.00 0.00 4.20
2977 4148 2.060980 ATCCACCTCCTGCTCGACC 61.061 63.158 0.00 0.00 0.00 4.79
2978 4149 2.522198 ATCCACCTCCTGCTCGACCT 62.522 60.000 0.00 0.00 0.00 3.85
2979 4150 2.716017 CCACCTCCTGCTCGACCTC 61.716 68.421 0.00 0.00 0.00 3.85
2980 4151 1.979155 CACCTCCTGCTCGACCTCA 60.979 63.158 0.00 0.00 0.00 3.86
2981 4152 1.000993 ACCTCCTGCTCGACCTCAT 59.999 57.895 0.00 0.00 0.00 2.90
2982 4153 1.040339 ACCTCCTGCTCGACCTCATC 61.040 60.000 0.00 0.00 0.00 2.92
2983 4154 1.739049 CTCCTGCTCGACCTCATCC 59.261 63.158 0.00 0.00 0.00 3.51
2984 4155 2.069465 CTCCTGCTCGACCTCATCCG 62.069 65.000 0.00 0.00 0.00 4.18
2985 4156 2.418910 CCTGCTCGACCTCATCCGT 61.419 63.158 0.00 0.00 0.00 4.69
2986 4157 1.226802 CTGCTCGACCTCATCCGTG 60.227 63.158 0.00 0.00 0.00 4.94
2987 4158 1.938657 CTGCTCGACCTCATCCGTGT 61.939 60.000 0.00 0.00 0.00 4.49
2988 4159 0.678684 TGCTCGACCTCATCCGTGTA 60.679 55.000 0.00 0.00 0.00 2.90
2989 4160 0.029567 GCTCGACCTCATCCGTGTAG 59.970 60.000 0.00 0.00 0.00 2.74
2990 4161 0.663688 CTCGACCTCATCCGTGTAGG 59.336 60.000 0.00 0.00 42.97 3.18
2991 4162 0.034767 TCGACCTCATCCGTGTAGGT 60.035 55.000 0.00 0.00 46.33 3.08
2992 4163 0.100682 CGACCTCATCCGTGTAGGTG 59.899 60.000 0.00 0.00 43.69 4.00
2993 4164 1.471119 GACCTCATCCGTGTAGGTGA 58.529 55.000 0.00 0.00 43.69 4.02
2994 4165 1.822990 GACCTCATCCGTGTAGGTGAA 59.177 52.381 0.00 0.00 43.69 3.18
2995 4166 1.549170 ACCTCATCCGTGTAGGTGAAC 59.451 52.381 0.00 0.00 42.08 3.18
2996 4167 1.548719 CCTCATCCGTGTAGGTGAACA 59.451 52.381 0.00 0.00 41.99 3.18
2997 4168 2.168521 CCTCATCCGTGTAGGTGAACAT 59.831 50.000 0.00 0.00 41.99 2.71
2998 4169 3.448686 CTCATCCGTGTAGGTGAACATC 58.551 50.000 0.00 0.00 41.99 3.06
2999 4170 3.096852 TCATCCGTGTAGGTGAACATCT 58.903 45.455 0.00 0.00 41.99 2.90
3000 4171 3.130516 TCATCCGTGTAGGTGAACATCTC 59.869 47.826 0.00 0.00 41.99 2.75
3001 4172 1.822990 TCCGTGTAGGTGAACATCTCC 59.177 52.381 0.00 0.00 41.99 3.71
3002 4173 1.469251 CCGTGTAGGTGAACATCTCCG 60.469 57.143 0.00 0.00 35.32 4.63
3003 4174 1.641577 GTGTAGGTGAACATCTCCGC 58.358 55.000 0.00 0.00 35.32 5.54
3004 4175 0.535335 TGTAGGTGAACATCTCCGCC 59.465 55.000 0.00 0.00 35.32 6.13
3005 4176 0.824759 GTAGGTGAACATCTCCGCCT 59.175 55.000 0.00 0.00 35.32 5.52
3006 4177 1.112113 TAGGTGAACATCTCCGCCTC 58.888 55.000 0.00 0.00 35.32 4.70
3007 4178 1.153349 GGTGAACATCTCCGCCTCC 60.153 63.158 0.00 0.00 0.00 4.30
3008 4179 1.617947 GGTGAACATCTCCGCCTCCT 61.618 60.000 0.00 0.00 0.00 3.69
3009 4180 0.179097 GTGAACATCTCCGCCTCCTC 60.179 60.000 0.00 0.00 0.00 3.71
3010 4181 1.330655 TGAACATCTCCGCCTCCTCC 61.331 60.000 0.00 0.00 0.00 4.30
3011 4182 2.356818 GAACATCTCCGCCTCCTCCG 62.357 65.000 0.00 0.00 0.00 4.63
3012 4183 4.292178 CATCTCCGCCTCCTCCGC 62.292 72.222 0.00 0.00 0.00 5.54
3021 4192 4.521062 CTCCTCCGCGGCCTCTTG 62.521 72.222 23.51 4.18 0.00 3.02
3030 4201 4.496336 GGCCTCTTGCGCCTCCAT 62.496 66.667 4.18 0.00 43.48 3.41
3031 4202 2.899339 GCCTCTTGCGCCTCCATC 60.899 66.667 4.18 0.00 0.00 3.51
3032 4203 2.906458 CCTCTTGCGCCTCCATCT 59.094 61.111 4.18 0.00 0.00 2.90
3033 4204 1.227497 CCTCTTGCGCCTCCATCTC 60.227 63.158 4.18 0.00 0.00 2.75
3034 4205 1.227497 CTCTTGCGCCTCCATCTCC 60.227 63.158 4.18 0.00 0.00 3.71
3035 4206 1.684386 CTCTTGCGCCTCCATCTCCT 61.684 60.000 4.18 0.00 0.00 3.69
3036 4207 1.523258 CTTGCGCCTCCATCTCCTG 60.523 63.158 4.18 0.00 0.00 3.86
3037 4208 3.687321 TTGCGCCTCCATCTCCTGC 62.687 63.158 4.18 0.00 0.00 4.85
3038 4209 4.925861 GCGCCTCCATCTCCTGCC 62.926 72.222 0.00 0.00 0.00 4.85
3039 4210 3.473647 CGCCTCCATCTCCTGCCA 61.474 66.667 0.00 0.00 0.00 4.92
3040 4211 2.509916 GCCTCCATCTCCTGCCAG 59.490 66.667 0.00 0.00 0.00 4.85
3041 4212 2.509916 CCTCCATCTCCTGCCAGC 59.490 66.667 0.00 0.00 0.00 4.85
3042 4213 2.108566 CTCCATCTCCTGCCAGCG 59.891 66.667 0.00 0.00 0.00 5.18
3043 4214 2.364186 TCCATCTCCTGCCAGCGA 60.364 61.111 0.00 0.00 0.00 4.93
3044 4215 2.202987 CCATCTCCTGCCAGCGAC 60.203 66.667 0.00 0.00 0.00 5.19
3045 4216 2.584418 CATCTCCTGCCAGCGACG 60.584 66.667 0.00 0.00 0.00 5.12
3046 4217 3.842923 ATCTCCTGCCAGCGACGG 61.843 66.667 0.00 0.00 0.00 4.79
3069 4240 3.749064 TGCCTCCGCAGTCGACTC 61.749 66.667 16.96 9.87 41.12 3.36
3070 4241 4.500116 GCCTCCGCAGTCGACTCC 62.500 72.222 16.96 5.54 38.10 3.85
3071 4242 4.180946 CCTCCGCAGTCGACTCCG 62.181 72.222 21.88 21.88 38.10 4.63
3072 4243 3.125573 CTCCGCAGTCGACTCCGA 61.126 66.667 29.65 16.42 43.35 4.55
3080 4251 3.886340 TCGACTCCGACCGAAGAG 58.114 61.111 0.00 0.00 40.30 2.85
3081 4252 1.294459 TCGACTCCGACCGAAGAGA 59.706 57.895 0.00 0.00 40.30 3.10
3082 4253 0.321034 TCGACTCCGACCGAAGAGAA 60.321 55.000 0.00 0.00 40.30 2.87
3083 4254 0.733729 CGACTCCGACCGAAGAGAAT 59.266 55.000 0.00 0.00 38.22 2.40
3084 4255 1.268133 CGACTCCGACCGAAGAGAATC 60.268 57.143 0.00 0.00 38.22 2.52
3085 4256 0.733729 ACTCCGACCGAAGAGAATCG 59.266 55.000 0.00 0.00 42.67 3.34
3086 4257 1.015109 CTCCGACCGAAGAGAATCGA 58.985 55.000 0.00 0.00 45.48 3.59
3087 4258 1.003331 CTCCGACCGAAGAGAATCGAG 60.003 57.143 0.00 0.00 45.48 4.04
3088 4259 0.029567 CCGACCGAAGAGAATCGAGG 59.970 60.000 0.00 0.00 45.48 4.63
3089 4260 1.015109 CGACCGAAGAGAATCGAGGA 58.985 55.000 0.00 0.00 45.48 3.71
3090 4261 1.604755 CGACCGAAGAGAATCGAGGAT 59.395 52.381 0.00 0.00 45.48 3.24
3091 4262 2.033550 CGACCGAAGAGAATCGAGGATT 59.966 50.000 0.00 0.00 45.48 3.01
3092 4263 3.376540 GACCGAAGAGAATCGAGGATTG 58.623 50.000 0.00 0.00 45.48 2.67
3093 4264 2.131183 CCGAAGAGAATCGAGGATTGC 58.869 52.381 0.00 0.00 45.48 3.56
3094 4265 2.131183 CGAAGAGAATCGAGGATTGCC 58.869 52.381 0.00 0.00 45.48 4.52
3103 4274 2.274760 AGGATTGCCTGCTGCTCC 59.725 61.111 0.00 0.00 44.90 4.70
3104 4275 3.207669 GGATTGCCTGCTGCTCCG 61.208 66.667 0.00 0.00 42.00 4.63
3105 4276 3.885521 GATTGCCTGCTGCTCCGC 61.886 66.667 0.00 0.00 42.00 5.54
3115 4286 4.166888 TGCTCCGCCTGCAGATCC 62.167 66.667 17.39 1.86 35.31 3.36
3116 4287 4.925861 GCTCCGCCTGCAGATCCC 62.926 72.222 17.39 0.00 0.00 3.85
3117 4288 4.247380 CTCCGCCTGCAGATCCCC 62.247 72.222 17.39 0.00 0.00 4.81
3120 4291 4.899239 CGCCTGCAGATCCCCGTC 62.899 72.222 17.39 0.00 0.00 4.79
3121 4292 4.899239 GCCTGCAGATCCCCGTCG 62.899 72.222 17.39 0.00 0.00 5.12
3122 4293 4.899239 CCTGCAGATCCCCGTCGC 62.899 72.222 17.39 0.00 0.00 5.19
3123 4294 4.899239 CTGCAGATCCCCGTCGCC 62.899 72.222 8.42 0.00 0.00 5.54
3125 4296 4.467084 GCAGATCCCCGTCGCCAA 62.467 66.667 0.00 0.00 0.00 4.52
3126 4297 2.511600 CAGATCCCCGTCGCCAAC 60.512 66.667 0.00 0.00 0.00 3.77
3137 4308 4.715523 CGCCAACGTCCCCCACAT 62.716 66.667 0.00 0.00 33.53 3.21
3138 4309 2.282887 GCCAACGTCCCCCACATT 60.283 61.111 0.00 0.00 0.00 2.71
3139 4310 2.340328 GCCAACGTCCCCCACATTC 61.340 63.158 0.00 0.00 0.00 2.67
3140 4311 1.378762 CCAACGTCCCCCACATTCT 59.621 57.895 0.00 0.00 0.00 2.40
3141 4312 0.676782 CCAACGTCCCCCACATTCTC 60.677 60.000 0.00 0.00 0.00 2.87
3142 4313 0.676782 CAACGTCCCCCACATTCTCC 60.677 60.000 0.00 0.00 0.00 3.71
3143 4314 0.840722 AACGTCCCCCACATTCTCCT 60.841 55.000 0.00 0.00 0.00 3.69
3144 4315 1.265454 ACGTCCCCCACATTCTCCTC 61.265 60.000 0.00 0.00 0.00 3.71
3145 4316 1.915983 GTCCCCCACATTCTCCTCC 59.084 63.158 0.00 0.00 0.00 4.30
3146 4317 0.621862 GTCCCCCACATTCTCCTCCT 60.622 60.000 0.00 0.00 0.00 3.69
3147 4318 0.326618 TCCCCCACATTCTCCTCCTC 60.327 60.000 0.00 0.00 0.00 3.71
3148 4319 1.348775 CCCCCACATTCTCCTCCTCC 61.349 65.000 0.00 0.00 0.00 4.30
3149 4320 0.327000 CCCCACATTCTCCTCCTCCT 60.327 60.000 0.00 0.00 0.00 3.69
3150 4321 1.127343 CCCACATTCTCCTCCTCCTC 58.873 60.000 0.00 0.00 0.00 3.71
3151 4322 0.749649 CCACATTCTCCTCCTCCTCG 59.250 60.000 0.00 0.00 0.00 4.63
3152 4323 1.479709 CACATTCTCCTCCTCCTCGT 58.520 55.000 0.00 0.00 0.00 4.18
3153 4324 1.407258 CACATTCTCCTCCTCCTCGTC 59.593 57.143 0.00 0.00 0.00 4.20
3154 4325 1.036707 CATTCTCCTCCTCCTCGTCC 58.963 60.000 0.00 0.00 0.00 4.79
3155 4326 0.930726 ATTCTCCTCCTCCTCGTCCT 59.069 55.000 0.00 0.00 0.00 3.85
3156 4327 0.256464 TTCTCCTCCTCCTCGTCCTC 59.744 60.000 0.00 0.00 0.00 3.71
3157 4328 1.152839 CTCCTCCTCCTCGTCCTCC 60.153 68.421 0.00 0.00 0.00 4.30
3158 4329 1.619975 TCCTCCTCCTCGTCCTCCT 60.620 63.158 0.00 0.00 0.00 3.69
3159 4330 1.152839 CCTCCTCCTCGTCCTCCTC 60.153 68.421 0.00 0.00 0.00 3.71
3160 4331 1.152839 CTCCTCCTCGTCCTCCTCC 60.153 68.421 0.00 0.00 0.00 4.30
3161 4332 1.927569 CTCCTCCTCGTCCTCCTCCA 61.928 65.000 0.00 0.00 0.00 3.86
3162 4333 1.755008 CCTCCTCGTCCTCCTCCAC 60.755 68.421 0.00 0.00 0.00 4.02
3163 4334 1.755008 CTCCTCGTCCTCCTCCACC 60.755 68.421 0.00 0.00 0.00 4.61
3164 4335 2.037367 CCTCGTCCTCCTCCACCA 59.963 66.667 0.00 0.00 0.00 4.17
3165 4336 2.352032 CCTCGTCCTCCTCCACCAC 61.352 68.421 0.00 0.00 0.00 4.16
3166 4337 2.283676 TCGTCCTCCTCCACCACC 60.284 66.667 0.00 0.00 0.00 4.61
3167 4338 2.283966 CGTCCTCCTCCACCACCT 60.284 66.667 0.00 0.00 0.00 4.00
3168 4339 2.352032 CGTCCTCCTCCACCACCTC 61.352 68.421 0.00 0.00 0.00 3.85
3169 4340 1.990614 GTCCTCCTCCACCACCTCC 60.991 68.421 0.00 0.00 0.00 4.30
3170 4341 2.177518 TCCTCCTCCACCACCTCCT 61.178 63.158 0.00 0.00 0.00 3.69
3171 4342 1.687493 CCTCCTCCACCACCTCCTC 60.687 68.421 0.00 0.00 0.00 3.71
3172 4343 1.687493 CTCCTCCACCACCTCCTCC 60.687 68.421 0.00 0.00 0.00 4.30
3173 4344 2.174876 CTCCTCCACCACCTCCTCCT 62.175 65.000 0.00 0.00 0.00 3.69
3174 4345 1.687493 CCTCCACCACCTCCTCCTC 60.687 68.421 0.00 0.00 0.00 3.71
3175 4346 1.687493 CTCCACCACCTCCTCCTCC 60.687 68.421 0.00 0.00 0.00 4.30
3176 4347 2.174876 CTCCACCACCTCCTCCTCCT 62.175 65.000 0.00 0.00 0.00 3.69
3177 4348 1.687493 CCACCACCTCCTCCTCCTC 60.687 68.421 0.00 0.00 0.00 3.71
3178 4349 1.687493 CACCACCTCCTCCTCCTCC 60.687 68.421 0.00 0.00 0.00 4.30
3179 4350 1.864559 ACCACCTCCTCCTCCTCCT 60.865 63.158 0.00 0.00 0.00 3.69
3180 4351 1.075600 CCACCTCCTCCTCCTCCTC 60.076 68.421 0.00 0.00 0.00 3.71
3181 4352 1.075600 CACCTCCTCCTCCTCCTCC 60.076 68.421 0.00 0.00 0.00 4.30
3182 4353 1.230819 ACCTCCTCCTCCTCCTCCT 60.231 63.158 0.00 0.00 0.00 3.69
3183 4354 1.293683 ACCTCCTCCTCCTCCTCCTC 61.294 65.000 0.00 0.00 0.00 3.71
3184 4355 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
3185 4356 1.230650 TCCTCCTCCTCCTCCTCCA 60.231 63.158 0.00 0.00 0.00 3.86
3186 4357 0.855855 TCCTCCTCCTCCTCCTCCAA 60.856 60.000 0.00 0.00 0.00 3.53
3187 4358 0.689412 CCTCCTCCTCCTCCTCCAAC 60.689 65.000 0.00 0.00 0.00 3.77
3188 4359 0.338120 CTCCTCCTCCTCCTCCAACT 59.662 60.000 0.00 0.00 0.00 3.16
3189 4360 0.336737 TCCTCCTCCTCCTCCAACTC 59.663 60.000 0.00 0.00 0.00 3.01
3190 4361 0.689412 CCTCCTCCTCCTCCAACTCC 60.689 65.000 0.00 0.00 0.00 3.85
3191 4362 0.338120 CTCCTCCTCCTCCAACTCCT 59.662 60.000 0.00 0.00 0.00 3.69
3192 4363 0.793617 TCCTCCTCCTCCAACTCCTT 59.206 55.000 0.00 0.00 0.00 3.36
3193 4364 1.199615 CCTCCTCCTCCAACTCCTTC 58.800 60.000 0.00 0.00 0.00 3.46
3194 4365 1.273552 CCTCCTCCTCCAACTCCTTCT 60.274 57.143 0.00 0.00 0.00 2.85
3195 4366 2.107366 CTCCTCCTCCAACTCCTTCTC 58.893 57.143 0.00 0.00 0.00 2.87
3196 4367 1.199615 CCTCCTCCAACTCCTTCTCC 58.800 60.000 0.00 0.00 0.00 3.71
3197 4368 0.820871 CTCCTCCAACTCCTTCTCCG 59.179 60.000 0.00 0.00 0.00 4.63
3198 4369 0.614979 TCCTCCAACTCCTTCTCCGG 60.615 60.000 0.00 0.00 0.00 5.14
3199 4370 0.614979 CCTCCAACTCCTTCTCCGGA 60.615 60.000 2.93 2.93 0.00 5.14
3200 4371 1.490574 CTCCAACTCCTTCTCCGGAT 58.509 55.000 3.57 0.00 31.43 4.18
3201 4372 1.410882 CTCCAACTCCTTCTCCGGATC 59.589 57.143 3.57 0.00 31.43 3.36
3202 4373 0.466124 CCAACTCCTTCTCCGGATCC 59.534 60.000 3.57 0.00 31.43 3.36
3203 4374 1.195115 CAACTCCTTCTCCGGATCCA 58.805 55.000 13.41 0.00 31.43 3.41
3204 4375 1.134670 CAACTCCTTCTCCGGATCCAC 60.135 57.143 13.41 0.00 31.43 4.02
3205 4376 0.336737 ACTCCTTCTCCGGATCCACT 59.663 55.000 13.41 0.00 31.43 4.00
3206 4377 0.749649 CTCCTTCTCCGGATCCACTG 59.250 60.000 13.41 0.00 31.43 3.66
3207 4378 1.144936 CCTTCTCCGGATCCACTGC 59.855 63.158 13.41 0.00 0.00 4.40
3208 4379 1.617018 CCTTCTCCGGATCCACTGCA 61.617 60.000 13.41 0.00 0.00 4.41
3209 4380 0.467384 CTTCTCCGGATCCACTGCAT 59.533 55.000 13.41 0.00 0.00 3.96
3210 4381 0.465705 TTCTCCGGATCCACTGCATC 59.534 55.000 13.41 0.00 0.00 3.91
3211 4382 1.070445 CTCCGGATCCACTGCATCC 59.930 63.158 13.41 0.00 37.10 3.51
3214 4385 3.230284 GGATCCACTGCATCCGGA 58.770 61.111 6.61 6.61 30.62 5.14
3215 4386 1.070445 GGATCCACTGCATCCGGAG 59.930 63.158 11.34 3.17 36.48 4.63
3246 4417 4.577246 GATCCGAGCTTCGCGCCT 62.577 66.667 0.00 0.00 38.82 5.52
3247 4418 3.195591 GATCCGAGCTTCGCGCCTA 62.196 63.158 0.00 0.00 38.82 3.93
3248 4419 3.200887 ATCCGAGCTTCGCGCCTAG 62.201 63.158 0.00 0.00 38.82 3.02
3260 4431 3.787001 GCCTAGCCCGGTTCTGCT 61.787 66.667 8.07 8.07 41.57 4.24
3261 4432 2.501610 CCTAGCCCGGTTCTGCTC 59.498 66.667 6.18 0.00 39.00 4.26
3262 4433 2.359169 CCTAGCCCGGTTCTGCTCA 61.359 63.158 6.18 0.00 39.00 4.26
3263 4434 1.596934 CTAGCCCGGTTCTGCTCAA 59.403 57.895 6.18 0.00 39.00 3.02
3264 4435 0.036388 CTAGCCCGGTTCTGCTCAAA 60.036 55.000 6.18 0.00 39.00 2.69
3265 4436 0.618458 TAGCCCGGTTCTGCTCAAAT 59.382 50.000 6.18 0.00 39.00 2.32
3266 4437 0.618458 AGCCCGGTTCTGCTCAAATA 59.382 50.000 0.00 0.00 30.33 1.40
3267 4438 1.017387 GCCCGGTTCTGCTCAAATAG 58.983 55.000 0.00 0.00 0.00 1.73
3278 4449 2.780595 TCAAATAGCTTGAGCCGGC 58.219 52.632 21.89 21.89 39.20 6.13
3279 4450 1.089481 TCAAATAGCTTGAGCCGGCG 61.089 55.000 23.20 7.90 39.20 6.46
3280 4451 2.472909 AAATAGCTTGAGCCGGCGC 61.473 57.895 24.58 24.58 43.38 6.53
3296 4467 4.699522 GCTCCGGCGTGAAAGGGT 62.700 66.667 6.01 0.00 0.00 4.34
3297 4468 2.032071 CTCCGGCGTGAAAGGGTT 59.968 61.111 6.01 0.00 0.00 4.11
3298 4469 1.599797 CTCCGGCGTGAAAGGGTTT 60.600 57.895 6.01 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 6.370186 AAGTACTCCCTCGGTAAAGAAATT 57.630 37.500 0.00 0.00 0.00 1.82
18 19 6.874134 TCAAAATTCTCTGCCAGTAAGTACTC 59.126 38.462 0.00 0.00 33.46 2.59
29 30 2.165998 AGGCACTCAAAATTCTCTGCC 58.834 47.619 0.00 0.00 43.85 4.85
73 74 5.121811 CCGAGTTCCTGAGATTCATTGATT 58.878 41.667 0.00 0.00 0.00 2.57
85 86 7.519032 AATTAATGAAAAACCGAGTTCCTGA 57.481 32.000 0.00 0.00 0.00 3.86
86 87 9.124807 GTTAATTAATGAAAAACCGAGTTCCTG 57.875 33.333 0.31 0.00 0.00 3.86
88 89 9.124807 CAGTTAATTAATGAAAAACCGAGTTCC 57.875 33.333 0.31 0.00 0.00 3.62
127 128 8.702163 ATTTGCCTCGTCAATTAATTAAAAGG 57.298 30.769 1.21 6.98 0.00 3.11
128 129 9.573133 AGATTTGCCTCGTCAATTAATTAAAAG 57.427 29.630 1.21 0.00 0.00 2.27
130 131 9.921637 AAAGATTTGCCTCGTCAATTAATTAAA 57.078 25.926 1.21 0.00 0.00 1.52
140 149 4.761739 AGAATCAAAAGATTTGCCTCGTCA 59.238 37.500 0.00 0.00 0.00 4.35
181 208 2.157863 GCTCTGGCTAAACTGAACGAAC 59.842 50.000 0.00 0.00 35.22 3.95
182 209 2.413837 GCTCTGGCTAAACTGAACGAA 58.586 47.619 0.00 0.00 35.22 3.85
229 256 6.039382 GGGCTAAGAAAAAGACTGTCAAAGAA 59.961 38.462 10.88 0.00 0.00 2.52
299 327 4.261197 CGTTCTTGTTCCAGGGAGAAAAAG 60.261 45.833 0.00 0.00 40.89 2.27
305 333 2.543777 TTCGTTCTTGTTCCAGGGAG 57.456 50.000 0.00 0.00 0.00 4.30
331 359 6.542370 ACAAATATTTATGAACGGAGGGAGTG 59.458 38.462 0.00 0.00 0.00 3.51
332 360 6.659824 ACAAATATTTATGAACGGAGGGAGT 58.340 36.000 0.00 0.00 0.00 3.85
333 361 7.568199 AACAAATATTTATGAACGGAGGGAG 57.432 36.000 0.00 0.00 0.00 4.30
336 364 9.855021 AGAAAAACAAATATTTATGAACGGAGG 57.145 29.630 0.00 0.00 0.00 4.30
358 386 9.137459 TGGTAGTCCATTTGAAATGTTTAGAAA 57.863 29.630 15.93 0.00 39.03 2.52
359 387 8.573035 GTGGTAGTCCATTTGAAATGTTTAGAA 58.427 33.333 15.93 0.00 46.20 2.10
361 389 7.881142 TGTGGTAGTCCATTTGAAATGTTTAG 58.119 34.615 15.93 1.90 46.20 1.85
362 390 7.825331 TGTGGTAGTCCATTTGAAATGTTTA 57.175 32.000 15.93 3.78 46.20 2.01
363 391 6.723298 TGTGGTAGTCCATTTGAAATGTTT 57.277 33.333 15.93 4.63 46.20 2.83
364 392 6.916360 ATGTGGTAGTCCATTTGAAATGTT 57.084 33.333 15.93 4.95 46.20 2.71
365 393 6.093495 CGTATGTGGTAGTCCATTTGAAATGT 59.907 38.462 15.93 1.43 46.20 2.71
366 394 6.458206 CCGTATGTGGTAGTCCATTTGAAATG 60.458 42.308 10.84 10.84 46.20 2.32
367 395 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
368 396 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
369 397 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
370 398 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
372 400 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
373 401 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
374 402 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
375 403 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
376 404 4.806330 CATACATCCGTATGTGGTAGTCC 58.194 47.826 3.56 0.00 46.70 3.85
408 470 8.296713 GCAAAATGAATGAACCTACACTCTAAA 58.703 33.333 0.00 0.00 0.00 1.85
413 475 6.655078 AAGCAAAATGAATGAACCTACACT 57.345 33.333 0.00 0.00 0.00 3.55
414 476 6.701400 ACAAAGCAAAATGAATGAACCTACAC 59.299 34.615 0.00 0.00 0.00 2.90
416 478 8.863049 CATACAAAGCAAAATGAATGAACCTAC 58.137 33.333 0.00 0.00 0.00 3.18
420 482 9.410556 ACTACATACAAAGCAAAATGAATGAAC 57.589 29.630 0.00 0.00 0.00 3.18
421 483 9.624697 GACTACATACAAAGCAAAATGAATGAA 57.375 29.630 0.00 0.00 0.00 2.57
427 489 7.862372 ACAAGTGACTACATACAAAGCAAAATG 59.138 33.333 0.00 0.00 0.00 2.32
428 490 7.940850 ACAAGTGACTACATACAAAGCAAAAT 58.059 30.769 0.00 0.00 0.00 1.82
431 493 6.540551 TCAACAAGTGACTACATACAAAGCAA 59.459 34.615 0.00 0.00 0.00 3.91
433 495 6.539649 TCAACAAGTGACTACATACAAAGC 57.460 37.500 0.00 0.00 0.00 3.51
446 508 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
461 523 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
462 524 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
463 525 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
464 526 8.319146 TCTCCGTTCCTAAATATTTGTCTTTCT 58.681 33.333 11.05 0.00 0.00 2.52
465 527 8.488651 TCTCCGTTCCTAAATATTTGTCTTTC 57.511 34.615 11.05 0.00 0.00 2.62
466 528 7.553044 CCTCTCCGTTCCTAAATATTTGTCTTT 59.447 37.037 11.05 0.00 0.00 2.52
468 530 6.408206 CCCTCTCCGTTCCTAAATATTTGTCT 60.408 42.308 11.05 0.00 0.00 3.41
469 531 5.758784 CCCTCTCCGTTCCTAAATATTTGTC 59.241 44.000 11.05 0.00 0.00 3.18
474 536 5.713807 AGTACCCTCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
475 537 5.134725 AGTACCCTCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
477 539 3.463048 AGTACCCTCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
478 540 3.094572 CAAGTACCCTCTCCGTTCCTAA 58.905 50.000 0.00 0.00 0.00 2.69
480 542 1.076677 TCAAGTACCCTCTCCGTTCCT 59.923 52.381 0.00 0.00 0.00 3.36
481 543 1.477295 CTCAAGTACCCTCTCCGTTCC 59.523 57.143 0.00 0.00 0.00 3.62
482 544 2.169330 ACTCAAGTACCCTCTCCGTTC 58.831 52.381 0.00 0.00 0.00 3.95
483 545 2.305858 ACTCAAGTACCCTCTCCGTT 57.694 50.000 0.00 0.00 0.00 4.44
484 546 3.666345 ATACTCAAGTACCCTCTCCGT 57.334 47.619 0.00 0.00 32.72 4.69
485 547 4.970711 TCTATACTCAAGTACCCTCTCCG 58.029 47.826 0.00 0.00 32.72 4.63
486 548 6.431852 GTGATCTATACTCAAGTACCCTCTCC 59.568 46.154 0.00 0.00 32.72 3.71
487 549 7.228590 AGTGATCTATACTCAAGTACCCTCTC 58.771 42.308 0.00 0.00 32.72 3.20
489 551 7.826918 AAGTGATCTATACTCAAGTACCCTC 57.173 40.000 0.00 0.00 32.72 4.30
490 552 8.504409 AGTAAGTGATCTATACTCAAGTACCCT 58.496 37.037 0.00 0.00 32.72 4.34
491 553 8.694581 AGTAAGTGATCTATACTCAAGTACCC 57.305 38.462 0.00 0.00 32.72 3.69
492 554 9.563748 AGAGTAAGTGATCTATACTCAAGTACC 57.436 37.037 23.11 6.71 45.05 3.34
496 558 8.999431 GGAGAGAGTAAGTGATCTATACTCAAG 58.001 40.741 23.11 0.00 45.05 3.02
497 559 8.495260 TGGAGAGAGTAAGTGATCTATACTCAA 58.505 37.037 23.11 9.72 45.05 3.02
501 563 9.211485 GTAGTGGAGAGAGTAAGTGATCTATAC 57.789 40.741 0.00 0.00 0.00 1.47
502 564 8.377034 GGTAGTGGAGAGAGTAAGTGATCTATA 58.623 40.741 0.00 0.00 0.00 1.31
503 565 7.073215 AGGTAGTGGAGAGAGTAAGTGATCTAT 59.927 40.741 0.00 0.00 0.00 1.98
504 566 6.387513 AGGTAGTGGAGAGAGTAAGTGATCTA 59.612 42.308 0.00 0.00 0.00 1.98
505 567 5.192923 AGGTAGTGGAGAGAGTAAGTGATCT 59.807 44.000 0.00 0.00 0.00 2.75
506 568 5.442391 AGGTAGTGGAGAGAGTAAGTGATC 58.558 45.833 0.00 0.00 0.00 2.92
508 570 4.536888 AGAGGTAGTGGAGAGAGTAAGTGA 59.463 45.833 0.00 0.00 0.00 3.41
511 573 6.243216 ACTAGAGGTAGTGGAGAGAGTAAG 57.757 45.833 0.00 0.00 38.14 2.34
512 574 7.364149 CTACTAGAGGTAGTGGAGAGAGTAA 57.636 44.000 0.00 0.00 39.54 2.24
513 575 6.982160 CTACTAGAGGTAGTGGAGAGAGTA 57.018 45.833 0.00 0.00 39.54 2.59
557 683 8.976986 TTCAAAGTTACGAAGAAGATACCTAC 57.023 34.615 0.00 0.00 0.00 3.18
646 773 1.594862 ACGCGCTATGAGATTTTCAGC 59.405 47.619 5.73 0.00 39.68 4.26
816 952 3.073274 AGTGCCGAGGAAGCTTAATTT 57.927 42.857 0.00 0.00 0.00 1.82
946 1129 3.979501 ATGGCCCATTCCAAGTCTATT 57.020 42.857 0.00 0.00 39.96 1.73
1240 1432 0.753848 GACGAGGAGGAGGAGGAAGG 60.754 65.000 0.00 0.00 0.00 3.46
1241 1433 0.257616 AGACGAGGAGGAGGAGGAAG 59.742 60.000 0.00 0.00 0.00 3.46
1242 1434 0.705253 AAGACGAGGAGGAGGAGGAA 59.295 55.000 0.00 0.00 0.00 3.36
1243 1435 0.256464 GAAGACGAGGAGGAGGAGGA 59.744 60.000 0.00 0.00 0.00 3.71
1244 1436 1.098712 CGAAGACGAGGAGGAGGAGG 61.099 65.000 0.00 0.00 42.66 4.30
1245 1437 0.393267 ACGAAGACGAGGAGGAGGAG 60.393 60.000 0.00 0.00 42.66 3.69
1672 1870 2.045708 GGATGTCCATGGCGTGCAA 61.046 57.895 6.96 0.00 35.64 4.08
2044 2257 3.083997 GGCCAGATCCGACACCCT 61.084 66.667 0.00 0.00 0.00 4.34
2309 2525 6.944862 ACTTTTCTTGCAGATTATCTGGAACT 59.055 34.615 22.10 1.94 45.58 3.01
2313 2529 6.748333 TCACTTTTCTTGCAGATTATCTGG 57.252 37.500 21.90 7.37 44.43 3.86
2317 2533 9.598517 TTTTTGTTCACTTTTCTTGCAGATTAT 57.401 25.926 0.00 0.00 0.00 1.28
2330 2546 7.386573 AGAAAATTCACGGTTTTTGTTCACTTT 59.613 29.630 0.00 0.00 0.00 2.66
2430 2647 8.402798 TGCCGTTTCATATACATTTTCCATAT 57.597 30.769 0.00 0.00 0.00 1.78
2444 2661 2.984562 TGATGCTCTTGCCGTTTCATA 58.015 42.857 0.00 0.00 38.71 2.15
2452 2669 1.133853 AGAGGGAATGATGCTCTTGCC 60.134 52.381 0.00 0.00 38.71 4.52
2593 3763 2.092291 AGTGCCGTGTATTCGTGCG 61.092 57.895 0.00 0.00 32.70 5.34
2606 3776 0.601558 TCGAAGACCTACACAGTGCC 59.398 55.000 0.00 0.00 0.00 5.01
2608 3778 2.755655 AGGATCGAAGACCTACACAGTG 59.244 50.000 0.00 0.00 42.51 3.66
2611 3781 3.318275 GCATAGGATCGAAGACCTACACA 59.682 47.826 15.23 0.68 42.51 3.72
2644 3814 4.019174 ACTGGAAATTCGAGATGCCAAAT 58.981 39.130 11.91 0.00 0.00 2.32
2648 3818 2.632377 TCACTGGAAATTCGAGATGCC 58.368 47.619 11.91 0.00 0.00 4.40
2756 3927 9.485206 GTACTTCCTCTAGTCATTTTTGTTACA 57.515 33.333 0.00 0.00 0.00 2.41
2797 3968 9.881529 GCATATGACACTAGTCTAAGTTACTAC 57.118 37.037 6.97 0.00 45.20 2.73
2833 4004 7.388224 TCCGACTGTAGATGCTCTAACTTATAG 59.612 40.741 0.00 0.00 29.58 1.31
2843 4014 3.182967 CAAAGTCCGACTGTAGATGCTC 58.817 50.000 0.65 0.00 0.00 4.26
2844 4015 2.675317 GCAAAGTCCGACTGTAGATGCT 60.675 50.000 0.65 0.00 0.00 3.79
2845 4016 1.661112 GCAAAGTCCGACTGTAGATGC 59.339 52.381 0.65 5.03 0.00 3.91
2846 4017 2.959516 TGCAAAGTCCGACTGTAGATG 58.040 47.619 0.65 0.00 0.00 2.90
2847 4018 3.678056 TTGCAAAGTCCGACTGTAGAT 57.322 42.857 0.65 0.00 0.00 1.98
2848 4019 3.462483 TTTGCAAAGTCCGACTGTAGA 57.538 42.857 8.05 0.00 0.00 2.59
2849 4020 3.125316 GGATTTGCAAAGTCCGACTGTAG 59.875 47.826 18.19 0.00 43.07 2.74
2850 4021 3.071479 GGATTTGCAAAGTCCGACTGTA 58.929 45.455 18.19 0.00 43.07 2.74
2851 4022 1.880027 GGATTTGCAAAGTCCGACTGT 59.120 47.619 18.19 0.00 43.07 3.55
2852 4023 2.619013 GGATTTGCAAAGTCCGACTG 57.381 50.000 18.19 0.00 43.07 3.51
2858 4029 0.526211 GGGACCGGATTTGCAAAGTC 59.474 55.000 18.19 17.38 0.00 3.01
2859 4030 0.898326 GGGGACCGGATTTGCAAAGT 60.898 55.000 18.19 9.70 40.86 2.66
2860 4031 1.890174 GGGGACCGGATTTGCAAAG 59.110 57.895 18.19 6.32 40.86 2.77
2861 4032 4.105388 GGGGACCGGATTTGCAAA 57.895 55.556 15.44 15.44 40.86 3.68
2917 4088 4.728102 TAAGGCGTGCACGGTCGG 62.728 66.667 37.47 12.79 40.23 4.79
2918 4089 1.632046 ATTTAAGGCGTGCACGGTCG 61.632 55.000 37.47 15.74 40.23 4.79
2919 4090 0.519961 AATTTAAGGCGTGCACGGTC 59.480 50.000 37.47 23.06 40.23 4.79
2920 4091 1.735571 CTAATTTAAGGCGTGCACGGT 59.264 47.619 37.47 8.21 40.23 4.83
2921 4092 1.531058 GCTAATTTAAGGCGTGCACGG 60.531 52.381 37.47 20.93 40.23 4.94
2922 4093 1.531058 GGCTAATTTAAGGCGTGCACG 60.531 52.381 34.01 34.01 43.27 5.34
2923 4094 1.470890 TGGCTAATTTAAGGCGTGCAC 59.529 47.619 6.82 6.82 44.67 4.57
2924 4095 1.470890 GTGGCTAATTTAAGGCGTGCA 59.529 47.619 0.00 0.00 44.67 4.57
2925 4096 1.743394 AGTGGCTAATTTAAGGCGTGC 59.257 47.619 0.00 0.00 44.67 5.34
2926 4097 4.165779 CAAAGTGGCTAATTTAAGGCGTG 58.834 43.478 0.00 0.00 44.67 5.34
2927 4098 3.366985 GCAAAGTGGCTAATTTAAGGCGT 60.367 43.478 0.00 0.00 44.67 5.68
2928 4099 3.179048 GCAAAGTGGCTAATTTAAGGCG 58.821 45.455 0.00 0.00 44.67 5.52
2929 4100 4.186856 TGCAAAGTGGCTAATTTAAGGC 57.813 40.909 0.00 0.00 42.19 4.35
2930 4101 5.351458 GGATGCAAAGTGGCTAATTTAAGG 58.649 41.667 0.00 0.00 34.04 2.69
2931 4102 5.036737 CGGATGCAAAGTGGCTAATTTAAG 58.963 41.667 0.00 0.00 34.04 1.85
2932 4103 4.142271 CCGGATGCAAAGTGGCTAATTTAA 60.142 41.667 0.00 0.00 34.04 1.52
2933 4104 3.380004 CCGGATGCAAAGTGGCTAATTTA 59.620 43.478 0.00 0.00 34.04 1.40
2934 4105 2.166254 CCGGATGCAAAGTGGCTAATTT 59.834 45.455 0.00 0.00 34.04 1.82
2935 4106 1.750778 CCGGATGCAAAGTGGCTAATT 59.249 47.619 0.00 0.00 34.04 1.40
2936 4107 1.392589 CCGGATGCAAAGTGGCTAAT 58.607 50.000 0.00 0.00 34.04 1.73
2937 4108 1.312371 GCCGGATGCAAAGTGGCTAA 61.312 55.000 5.05 0.00 42.44 3.09
2938 4109 1.748879 GCCGGATGCAAAGTGGCTA 60.749 57.895 5.05 0.00 42.44 3.93
2939 4110 3.064324 GCCGGATGCAAAGTGGCT 61.064 61.111 5.05 0.00 42.44 4.75
2940 4111 3.056313 GAGCCGGATGCAAAGTGGC 62.056 63.158 5.05 13.01 46.07 5.01
2941 4112 1.033746 ATGAGCCGGATGCAAAGTGG 61.034 55.000 5.05 0.00 44.83 4.00
2942 4113 0.379669 GATGAGCCGGATGCAAAGTG 59.620 55.000 5.05 0.00 44.83 3.16
2943 4114 0.749454 GGATGAGCCGGATGCAAAGT 60.749 55.000 5.05 0.00 44.83 2.66
2944 4115 0.749091 TGGATGAGCCGGATGCAAAG 60.749 55.000 5.05 0.00 44.83 2.77
2945 4116 1.031571 GTGGATGAGCCGGATGCAAA 61.032 55.000 5.05 0.00 44.83 3.68
2946 4117 1.451927 GTGGATGAGCCGGATGCAA 60.452 57.895 5.05 0.00 44.83 4.08
2947 4118 2.190313 GTGGATGAGCCGGATGCA 59.810 61.111 5.05 0.00 44.83 3.96
2948 4119 2.592861 GGTGGATGAGCCGGATGC 60.593 66.667 5.05 0.00 40.66 3.91
2949 4120 1.070445 GAGGTGGATGAGCCGGATG 59.930 63.158 5.05 0.00 40.66 3.51
2950 4121 2.143419 GGAGGTGGATGAGCCGGAT 61.143 63.158 5.05 0.00 40.66 4.18
2951 4122 2.764128 GGAGGTGGATGAGCCGGA 60.764 66.667 5.05 0.00 40.66 5.14
2952 4123 2.765807 AGGAGGTGGATGAGCCGG 60.766 66.667 0.00 0.00 40.66 6.13
2953 4124 2.503061 CAGGAGGTGGATGAGCCG 59.497 66.667 0.00 0.00 40.66 5.52
2954 4125 2.191641 GCAGGAGGTGGATGAGCC 59.808 66.667 0.00 0.00 37.10 4.70
2955 4126 1.145819 GAGCAGGAGGTGGATGAGC 59.854 63.158 0.00 0.00 0.00 4.26
2956 4127 1.039785 TCGAGCAGGAGGTGGATGAG 61.040 60.000 0.00 0.00 0.00 2.90
2957 4128 1.000359 TCGAGCAGGAGGTGGATGA 60.000 57.895 0.00 0.00 0.00 2.92
2958 4129 1.142748 GTCGAGCAGGAGGTGGATG 59.857 63.158 0.00 0.00 32.65 3.51
2959 4130 2.060980 GGTCGAGCAGGAGGTGGAT 61.061 63.158 10.30 0.00 32.65 3.41
2960 4131 2.680352 GGTCGAGCAGGAGGTGGA 60.680 66.667 10.30 0.00 0.00 4.02
2961 4132 2.681778 AGGTCGAGCAGGAGGTGG 60.682 66.667 18.15 0.00 0.00 4.61
2962 4133 1.326213 ATGAGGTCGAGCAGGAGGTG 61.326 60.000 18.15 0.00 0.00 4.00
2963 4134 1.000993 ATGAGGTCGAGCAGGAGGT 59.999 57.895 18.15 0.00 0.00 3.85
2964 4135 1.739049 GATGAGGTCGAGCAGGAGG 59.261 63.158 18.15 0.00 0.00 4.30
2965 4136 1.739049 GGATGAGGTCGAGCAGGAG 59.261 63.158 18.15 0.00 0.00 3.69
2966 4137 2.121538 CGGATGAGGTCGAGCAGGA 61.122 63.158 18.15 0.00 0.00 3.86
2967 4138 2.415010 CGGATGAGGTCGAGCAGG 59.585 66.667 18.15 0.00 0.00 4.85
2968 4139 1.226802 CACGGATGAGGTCGAGCAG 60.227 63.158 18.15 3.33 0.00 4.24
2969 4140 0.678684 TACACGGATGAGGTCGAGCA 60.679 55.000 18.15 0.79 0.00 4.26
2970 4141 0.029567 CTACACGGATGAGGTCGAGC 59.970 60.000 6.48 6.48 0.00 5.03
2971 4142 0.663688 CCTACACGGATGAGGTCGAG 59.336 60.000 0.00 0.00 33.16 4.04
2972 4143 0.034767 ACCTACACGGATGAGGTCGA 60.035 55.000 0.00 0.00 39.46 4.20
2973 4144 0.100682 CACCTACACGGATGAGGTCG 59.899 60.000 0.00 0.00 41.80 4.79
2974 4145 1.471119 TCACCTACACGGATGAGGTC 58.529 55.000 0.00 0.00 41.80 3.85
2975 4146 1.549170 GTTCACCTACACGGATGAGGT 59.451 52.381 0.00 0.00 44.65 3.85
2976 4147 1.548719 TGTTCACCTACACGGATGAGG 59.451 52.381 0.00 0.00 36.31 3.86
2977 4148 3.131223 AGATGTTCACCTACACGGATGAG 59.869 47.826 0.00 0.00 36.31 2.90
2978 4149 3.096852 AGATGTTCACCTACACGGATGA 58.903 45.455 0.00 0.00 36.31 2.92
2979 4150 3.448686 GAGATGTTCACCTACACGGATG 58.551 50.000 0.00 0.00 36.31 3.51
2980 4151 2.431057 GGAGATGTTCACCTACACGGAT 59.569 50.000 0.00 0.00 36.31 4.18
2981 4152 1.822990 GGAGATGTTCACCTACACGGA 59.177 52.381 0.00 0.00 36.31 4.69
2982 4153 1.469251 CGGAGATGTTCACCTACACGG 60.469 57.143 0.00 0.00 39.35 4.94
2983 4154 1.909376 CGGAGATGTTCACCTACACG 58.091 55.000 0.00 0.00 0.00 4.49
2984 4155 1.641577 GCGGAGATGTTCACCTACAC 58.358 55.000 0.00 0.00 0.00 2.90
2985 4156 0.535335 GGCGGAGATGTTCACCTACA 59.465 55.000 0.00 0.00 0.00 2.74
2986 4157 0.824759 AGGCGGAGATGTTCACCTAC 59.175 55.000 0.00 0.00 33.45 3.18
2987 4158 1.112113 GAGGCGGAGATGTTCACCTA 58.888 55.000 0.00 0.00 34.89 3.08
2988 4159 1.617947 GGAGGCGGAGATGTTCACCT 61.618 60.000 0.00 0.00 36.80 4.00
2989 4160 1.153349 GGAGGCGGAGATGTTCACC 60.153 63.158 0.00 0.00 0.00 4.02
2990 4161 0.179097 GAGGAGGCGGAGATGTTCAC 60.179 60.000 0.00 0.00 0.00 3.18
2991 4162 1.330655 GGAGGAGGCGGAGATGTTCA 61.331 60.000 0.00 0.00 0.00 3.18
2992 4163 1.443828 GGAGGAGGCGGAGATGTTC 59.556 63.158 0.00 0.00 0.00 3.18
2993 4164 2.427245 CGGAGGAGGCGGAGATGTT 61.427 63.158 0.00 0.00 0.00 2.71
2994 4165 2.835431 CGGAGGAGGCGGAGATGT 60.835 66.667 0.00 0.00 0.00 3.06
2995 4166 4.292178 GCGGAGGAGGCGGAGATG 62.292 72.222 0.00 0.00 0.00 2.90
3004 4175 4.521062 CAAGAGGCCGCGGAGGAG 62.521 72.222 33.48 8.98 45.00 3.69
3014 4185 2.899339 GATGGAGGCGCAAGAGGC 60.899 66.667 10.83 0.00 43.02 4.70
3015 4186 1.227497 GAGATGGAGGCGCAAGAGG 60.227 63.158 10.83 0.00 43.02 3.69
3016 4187 1.227497 GGAGATGGAGGCGCAAGAG 60.227 63.158 10.83 0.00 43.02 2.85
3017 4188 1.687146 AGGAGATGGAGGCGCAAGA 60.687 57.895 10.83 0.00 43.02 3.02
3018 4189 1.523258 CAGGAGATGGAGGCGCAAG 60.523 63.158 10.83 0.00 43.44 4.01
3019 4190 2.586245 CAGGAGATGGAGGCGCAA 59.414 61.111 10.83 0.00 0.00 4.85
3020 4191 4.166888 GCAGGAGATGGAGGCGCA 62.167 66.667 10.83 0.00 0.00 6.09
3021 4192 4.925861 GGCAGGAGATGGAGGCGC 62.926 72.222 0.00 0.00 0.00 6.53
3022 4193 3.457625 CTGGCAGGAGATGGAGGCG 62.458 68.421 6.61 0.00 0.00 5.52
3023 4194 2.509916 CTGGCAGGAGATGGAGGC 59.490 66.667 6.61 0.00 0.00 4.70
3024 4195 2.509916 GCTGGCAGGAGATGGAGG 59.490 66.667 17.64 0.00 0.00 4.30
3025 4196 2.108566 CGCTGGCAGGAGATGGAG 59.891 66.667 17.64 0.00 0.00 3.86
3026 4197 2.364186 TCGCTGGCAGGAGATGGA 60.364 61.111 17.64 0.00 0.00 3.41
3027 4198 2.202987 GTCGCTGGCAGGAGATGG 60.203 66.667 17.64 0.00 0.00 3.51
3028 4199 2.584418 CGTCGCTGGCAGGAGATG 60.584 66.667 17.64 6.12 0.00 2.90
3029 4200 3.842923 CCGTCGCTGGCAGGAGAT 61.843 66.667 17.64 0.00 0.00 2.75
3053 4224 4.500116 GGAGTCGACTGCGGAGGC 62.500 72.222 25.58 3.54 38.28 4.70
3063 4234 0.321034 TTCTCTTCGGTCGGAGTCGA 60.321 55.000 0.00 0.12 43.86 4.20
3064 4235 0.733729 ATTCTCTTCGGTCGGAGTCG 59.266 55.000 0.00 0.00 37.82 4.18
3065 4236 1.268133 CGATTCTCTTCGGTCGGAGTC 60.268 57.143 0.00 0.00 35.50 3.36
3066 4237 0.733729 CGATTCTCTTCGGTCGGAGT 59.266 55.000 0.00 0.00 35.50 3.85
3067 4238 1.003331 CTCGATTCTCTTCGGTCGGAG 60.003 57.143 0.00 0.00 39.56 4.63
3068 4239 1.015109 CTCGATTCTCTTCGGTCGGA 58.985 55.000 0.00 0.00 39.56 4.55
3069 4240 0.029567 CCTCGATTCTCTTCGGTCGG 59.970 60.000 0.00 0.00 39.56 4.79
3070 4241 1.015109 TCCTCGATTCTCTTCGGTCG 58.985 55.000 0.00 0.00 39.56 4.79
3071 4242 3.376540 CAATCCTCGATTCTCTTCGGTC 58.623 50.000 0.00 0.00 39.56 4.79
3072 4243 2.482142 GCAATCCTCGATTCTCTTCGGT 60.482 50.000 0.00 0.00 39.56 4.69
3073 4244 2.131183 GCAATCCTCGATTCTCTTCGG 58.869 52.381 0.00 0.00 39.56 4.30
3074 4245 2.131183 GGCAATCCTCGATTCTCTTCG 58.869 52.381 0.00 0.00 40.46 3.79
3075 4246 3.129871 CAGGCAATCCTCGATTCTCTTC 58.870 50.000 0.00 0.00 41.93 2.87
3076 4247 2.744494 GCAGGCAATCCTCGATTCTCTT 60.744 50.000 0.00 0.00 41.93 2.85
3077 4248 1.202627 GCAGGCAATCCTCGATTCTCT 60.203 52.381 0.00 0.00 41.93 3.10
3078 4249 1.202627 AGCAGGCAATCCTCGATTCTC 60.203 52.381 0.00 0.00 41.93 2.87
3079 4250 0.835941 AGCAGGCAATCCTCGATTCT 59.164 50.000 0.00 0.00 41.93 2.40
3080 4251 0.942962 CAGCAGGCAATCCTCGATTC 59.057 55.000 0.00 0.00 41.93 2.52
3081 4252 1.099879 GCAGCAGGCAATCCTCGATT 61.100 55.000 0.00 0.00 41.93 3.34
3082 4253 1.525535 GCAGCAGGCAATCCTCGAT 60.526 57.895 0.00 0.00 41.93 3.59
3083 4254 2.124983 GCAGCAGGCAATCCTCGA 60.125 61.111 0.00 0.00 41.93 4.04
3100 4271 4.247380 GGGGATCTGCAGGCGGAG 62.247 72.222 15.13 0.00 34.49 4.63
3103 4274 4.899239 GACGGGGATCTGCAGGCG 62.899 72.222 15.13 0.00 0.00 5.52
3104 4275 4.899239 CGACGGGGATCTGCAGGC 62.899 72.222 15.13 6.41 0.00 4.85
3105 4276 4.899239 GCGACGGGGATCTGCAGG 62.899 72.222 15.13 0.00 0.00 4.85
3106 4277 4.899239 GGCGACGGGGATCTGCAG 62.899 72.222 7.63 7.63 0.00 4.41
3108 4279 4.467084 TTGGCGACGGGGATCTGC 62.467 66.667 0.00 0.00 0.00 4.26
3109 4280 2.511600 GTTGGCGACGGGGATCTG 60.512 66.667 0.00 0.00 0.00 2.90
3120 4291 4.715523 ATGTGGGGGACGTTGGCG 62.716 66.667 0.00 0.00 44.93 5.69
3121 4292 2.282887 AATGTGGGGGACGTTGGC 60.283 61.111 0.00 0.00 32.19 4.52
3122 4293 0.676782 GAGAATGTGGGGGACGTTGG 60.677 60.000 0.00 0.00 33.67 3.77
3123 4294 0.676782 GGAGAATGTGGGGGACGTTG 60.677 60.000 0.00 0.00 33.67 4.10
3124 4295 0.840722 AGGAGAATGTGGGGGACGTT 60.841 55.000 0.00 0.00 36.43 3.99
3125 4296 1.229529 AGGAGAATGTGGGGGACGT 60.230 57.895 0.00 0.00 0.00 4.34
3126 4297 1.522569 GAGGAGAATGTGGGGGACG 59.477 63.158 0.00 0.00 0.00 4.79
3127 4298 0.621862 AGGAGGAGAATGTGGGGGAC 60.622 60.000 0.00 0.00 0.00 4.46
3128 4299 0.326618 GAGGAGGAGAATGTGGGGGA 60.327 60.000 0.00 0.00 0.00 4.81
3129 4300 1.348775 GGAGGAGGAGAATGTGGGGG 61.349 65.000 0.00 0.00 0.00 5.40
3130 4301 0.327000 AGGAGGAGGAGAATGTGGGG 60.327 60.000 0.00 0.00 0.00 4.96
3131 4302 1.127343 GAGGAGGAGGAGAATGTGGG 58.873 60.000 0.00 0.00 0.00 4.61
3132 4303 0.749649 CGAGGAGGAGGAGAATGTGG 59.250 60.000 0.00 0.00 0.00 4.17
3133 4304 1.407258 GACGAGGAGGAGGAGAATGTG 59.593 57.143 0.00 0.00 0.00 3.21
3134 4305 1.686741 GGACGAGGAGGAGGAGAATGT 60.687 57.143 0.00 0.00 0.00 2.71
3135 4306 1.036707 GGACGAGGAGGAGGAGAATG 58.963 60.000 0.00 0.00 0.00 2.67
3136 4307 0.930726 AGGACGAGGAGGAGGAGAAT 59.069 55.000 0.00 0.00 0.00 2.40
3137 4308 0.256464 GAGGACGAGGAGGAGGAGAA 59.744 60.000 0.00 0.00 0.00 2.87
3138 4309 1.637724 GGAGGACGAGGAGGAGGAGA 61.638 65.000 0.00 0.00 0.00 3.71
3139 4310 1.152839 GGAGGACGAGGAGGAGGAG 60.153 68.421 0.00 0.00 0.00 3.69
3140 4311 1.619975 AGGAGGACGAGGAGGAGGA 60.620 63.158 0.00 0.00 0.00 3.71
3141 4312 1.152839 GAGGAGGACGAGGAGGAGG 60.153 68.421 0.00 0.00 0.00 4.30
3142 4313 1.152839 GGAGGAGGACGAGGAGGAG 60.153 68.421 0.00 0.00 0.00 3.69
3143 4314 1.929088 TGGAGGAGGACGAGGAGGA 60.929 63.158 0.00 0.00 0.00 3.71
3144 4315 1.755008 GTGGAGGAGGACGAGGAGG 60.755 68.421 0.00 0.00 0.00 4.30
3145 4316 1.755008 GGTGGAGGAGGACGAGGAG 60.755 68.421 0.00 0.00 0.00 3.69
3146 4317 2.359404 GGTGGAGGAGGACGAGGA 59.641 66.667 0.00 0.00 0.00 3.71
3147 4318 2.037367 TGGTGGAGGAGGACGAGG 59.963 66.667 0.00 0.00 0.00 4.63
3148 4319 2.352032 GGTGGTGGAGGAGGACGAG 61.352 68.421 0.00 0.00 0.00 4.18
3149 4320 2.283676 GGTGGTGGAGGAGGACGA 60.284 66.667 0.00 0.00 0.00 4.20
3150 4321 2.283966 AGGTGGTGGAGGAGGACG 60.284 66.667 0.00 0.00 0.00 4.79
3151 4322 1.990614 GGAGGTGGTGGAGGAGGAC 60.991 68.421 0.00 0.00 0.00 3.85
3152 4323 2.169590 GAGGAGGTGGTGGAGGAGGA 62.170 65.000 0.00 0.00 0.00 3.71
3153 4324 1.687493 GAGGAGGTGGTGGAGGAGG 60.687 68.421 0.00 0.00 0.00 4.30
3154 4325 1.687493 GGAGGAGGTGGTGGAGGAG 60.687 68.421 0.00 0.00 0.00 3.69
3155 4326 2.169590 GAGGAGGAGGTGGTGGAGGA 62.170 65.000 0.00 0.00 0.00 3.71
3156 4327 1.687493 GAGGAGGAGGTGGTGGAGG 60.687 68.421 0.00 0.00 0.00 4.30
3157 4328 1.687493 GGAGGAGGAGGTGGTGGAG 60.687 68.421 0.00 0.00 0.00 3.86
3158 4329 2.169590 GAGGAGGAGGAGGTGGTGGA 62.170 65.000 0.00 0.00 0.00 4.02
3159 4330 1.687493 GAGGAGGAGGAGGTGGTGG 60.687 68.421 0.00 0.00 0.00 4.61
3160 4331 1.687493 GGAGGAGGAGGAGGTGGTG 60.687 68.421 0.00 0.00 0.00 4.17
3161 4332 1.864559 AGGAGGAGGAGGAGGTGGT 60.865 63.158 0.00 0.00 0.00 4.16
3162 4333 1.075600 GAGGAGGAGGAGGAGGTGG 60.076 68.421 0.00 0.00 0.00 4.61
3163 4334 1.075600 GGAGGAGGAGGAGGAGGTG 60.076 68.421 0.00 0.00 0.00 4.00
3164 4335 1.230819 AGGAGGAGGAGGAGGAGGT 60.231 63.158 0.00 0.00 0.00 3.85
3165 4336 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
3166 4337 1.292941 TGGAGGAGGAGGAGGAGGAG 61.293 65.000 0.00 0.00 0.00 3.69
3167 4338 0.855855 TTGGAGGAGGAGGAGGAGGA 60.856 60.000 0.00 0.00 0.00 3.71
3168 4339 0.689412 GTTGGAGGAGGAGGAGGAGG 60.689 65.000 0.00 0.00 0.00 4.30
3169 4340 0.338120 AGTTGGAGGAGGAGGAGGAG 59.662 60.000 0.00 0.00 0.00 3.69
3170 4341 0.336737 GAGTTGGAGGAGGAGGAGGA 59.663 60.000 0.00 0.00 0.00 3.71
3171 4342 0.689412 GGAGTTGGAGGAGGAGGAGG 60.689 65.000 0.00 0.00 0.00 4.30
3172 4343 0.338120 AGGAGTTGGAGGAGGAGGAG 59.662 60.000 0.00 0.00 0.00 3.69
3173 4344 0.793617 AAGGAGTTGGAGGAGGAGGA 59.206 55.000 0.00 0.00 0.00 3.71
3174 4345 1.199615 GAAGGAGTTGGAGGAGGAGG 58.800 60.000 0.00 0.00 0.00 4.30
3175 4346 2.107366 GAGAAGGAGTTGGAGGAGGAG 58.893 57.143 0.00 0.00 0.00 3.69
3176 4347 1.273324 GGAGAAGGAGTTGGAGGAGGA 60.273 57.143 0.00 0.00 0.00 3.71
3177 4348 1.199615 GGAGAAGGAGTTGGAGGAGG 58.800 60.000 0.00 0.00 0.00 4.30
3178 4349 0.820871 CGGAGAAGGAGTTGGAGGAG 59.179 60.000 0.00 0.00 0.00 3.69
3179 4350 0.614979 CCGGAGAAGGAGTTGGAGGA 60.615 60.000 0.00 0.00 0.00 3.71
3180 4351 0.614979 TCCGGAGAAGGAGTTGGAGG 60.615 60.000 0.00 0.00 34.92 4.30
3181 4352 1.410882 GATCCGGAGAAGGAGTTGGAG 59.589 57.143 11.34 0.00 44.55 3.86
3182 4353 1.486211 GATCCGGAGAAGGAGTTGGA 58.514 55.000 11.34 0.00 44.55 3.53
3183 4354 0.466124 GGATCCGGAGAAGGAGTTGG 59.534 60.000 11.34 0.00 44.55 3.77
3184 4355 1.134670 GTGGATCCGGAGAAGGAGTTG 60.135 57.143 11.34 0.00 44.55 3.16
3185 4356 1.196012 GTGGATCCGGAGAAGGAGTT 58.804 55.000 11.34 0.00 44.55 3.01
3186 4357 0.336737 AGTGGATCCGGAGAAGGAGT 59.663 55.000 11.34 0.00 44.55 3.85
3187 4358 0.749649 CAGTGGATCCGGAGAAGGAG 59.250 60.000 11.34 0.00 44.55 3.69
3188 4359 1.330655 GCAGTGGATCCGGAGAAGGA 61.331 60.000 11.34 0.00 45.54 3.36
3189 4360 1.144936 GCAGTGGATCCGGAGAAGG 59.855 63.158 11.34 0.00 0.00 3.46
3190 4361 0.467384 ATGCAGTGGATCCGGAGAAG 59.533 55.000 11.34 0.00 0.00 2.85
3191 4362 0.465705 GATGCAGTGGATCCGGAGAA 59.534 55.000 11.34 0.00 0.00 2.87
3192 4363 1.402896 GGATGCAGTGGATCCGGAGA 61.403 60.000 25.73 0.00 30.30 3.71
3193 4364 1.070445 GGATGCAGTGGATCCGGAG 59.930 63.158 25.73 0.00 30.30 4.63
3194 4365 3.230284 GGATGCAGTGGATCCGGA 58.770 61.111 25.73 6.61 30.30 5.14
3197 4368 1.070445 CTCCGGATGCAGTGGATCC 59.930 63.158 28.82 28.82 36.73 3.36
3198 4369 1.070445 CCTCCGGATGCAGTGGATC 59.930 63.158 15.79 15.79 0.00 3.36
3199 4370 0.398522 TACCTCCGGATGCAGTGGAT 60.399 55.000 3.57 0.00 0.00 3.41
3200 4371 1.001120 TACCTCCGGATGCAGTGGA 59.999 57.895 3.57 4.50 0.00 4.02
3201 4372 1.443407 CTACCTCCGGATGCAGTGG 59.557 63.158 3.57 3.65 0.00 4.00
3202 4373 1.227380 GCTACCTCCGGATGCAGTG 60.227 63.158 3.57 0.00 0.00 3.66
3203 4374 2.435693 GGCTACCTCCGGATGCAGT 61.436 63.158 3.57 2.98 0.00 4.40
3204 4375 2.423446 GGCTACCTCCGGATGCAG 59.577 66.667 3.57 3.06 0.00 4.41
3205 4376 3.161450 GGGCTACCTCCGGATGCA 61.161 66.667 3.57 0.00 0.00 3.96
3206 4377 3.942439 GGGGCTACCTCCGGATGC 61.942 72.222 3.57 7.49 36.80 3.91
3207 4378 3.616721 CGGGGCTACCTCCGGATG 61.617 72.222 3.57 4.42 42.32 3.51
3243 4414 3.741830 GAGCAGAACCGGGCTAGGC 62.742 68.421 6.32 8.00 41.22 3.93
3244 4415 1.899437 TTGAGCAGAACCGGGCTAGG 61.899 60.000 6.32 0.00 41.22 3.02
3245 4416 0.036388 TTTGAGCAGAACCGGGCTAG 60.036 55.000 6.32 0.00 41.22 3.42
3246 4417 0.618458 ATTTGAGCAGAACCGGGCTA 59.382 50.000 6.32 0.00 41.22 3.93
3247 4418 0.618458 TATTTGAGCAGAACCGGGCT 59.382 50.000 6.32 4.04 44.48 5.19
3248 4419 1.017387 CTATTTGAGCAGAACCGGGC 58.983 55.000 6.32 0.00 0.00 6.13
3260 4431 1.089481 CGCCGGCTCAAGCTATTTGA 61.089 55.000 26.68 0.00 43.40 2.69
3261 4432 1.353103 CGCCGGCTCAAGCTATTTG 59.647 57.895 26.68 0.00 41.70 2.32
3262 4433 2.472909 GCGCCGGCTCAAGCTATTT 61.473 57.895 26.68 0.00 41.70 1.40
3263 4434 2.897350 GCGCCGGCTCAAGCTATT 60.897 61.111 26.68 0.00 41.70 1.73
3279 4450 4.699522 ACCCTTTCACGCCGGAGC 62.700 66.667 5.05 0.00 0.00 4.70
3280 4451 1.599797 AAACCCTTTCACGCCGGAG 60.600 57.895 5.05 3.72 0.00 4.63
3281 4452 2.511900 AAACCCTTTCACGCCGGA 59.488 55.556 5.05 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.