Multiple sequence alignment - TraesCS6D01G245400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G245400 chr6D 100.000 5509 0 0 1 5509 347677284 347682792 0.000000e+00 10174.0
1 TraesCS6D01G245400 chr6A 86.838 2720 150 86 6 2624 495697066 495694454 0.000000e+00 2848.0
2 TraesCS6D01G245400 chr6A 93.109 1901 69 33 3017 4873 495694184 495692302 0.000000e+00 2728.0
3 TraesCS6D01G245400 chr6A 86.036 444 49 6 4952 5388 495691510 495691073 1.080000e-126 464.0
4 TraesCS6D01G245400 chr6A 95.217 230 9 2 2727 2956 495694420 495694193 4.060000e-96 363.0
5 TraesCS6D01G245400 chr6A 92.537 67 2 3 2952 3018 421528019 421527956 5.880000e-15 93.5
6 TraesCS6D01G245400 chr6A 96.429 56 2 0 2959 3014 551862599 551862544 5.880000e-15 93.5
7 TraesCS6D01G245400 chr6B 90.762 2046 95 41 1 2024 532348420 532346447 0.000000e+00 2645.0
8 TraesCS6D01G245400 chr6B 92.842 1858 72 25 3013 4830 532345527 532343691 0.000000e+00 2638.0
9 TraesCS6D01G245400 chr6B 89.338 544 33 12 2043 2577 532346460 532345933 0.000000e+00 660.0
10 TraesCS6D01G245400 chr6B 83.663 202 21 5 2761 2956 532345724 532345529 4.380000e-41 180.0
11 TraesCS6D01G245400 chr6B 98.182 55 1 0 2959 3013 70877373 70877427 4.540000e-16 97.1
12 TraesCS6D01G245400 chr2D 82.237 304 27 14 4031 4331 546452877 546453156 2.570000e-58 237.0
13 TraesCS6D01G245400 chr2D 87.143 140 8 5 3686 3817 546452462 546452599 3.440000e-32 150.0
14 TraesCS6D01G245400 chr2D 95.000 60 1 2 3143 3202 546451932 546451989 5.880000e-15 93.5
15 TraesCS6D01G245400 chr2B 81.579 304 29 13 4031 4331 653276719 653276998 5.550000e-55 226.0
16 TraesCS6D01G245400 chr2B 86.232 138 13 1 3686 3817 653276306 653276443 1.600000e-30 145.0
17 TraesCS6D01G245400 chr2B 84.536 97 7 5 3143 3233 653275782 653275876 7.600000e-14 89.8
18 TraesCS6D01G245400 chr2A 81.188 303 26 17 4034 4331 689931905 689931629 1.200000e-51 215.0
19 TraesCS6D01G245400 chr2A 98.113 53 1 0 2962 3014 677170497 677170445 5.880000e-15 93.5
20 TraesCS6D01G245400 chr2A 84.536 97 7 5 3143 3233 689932853 689932759 7.600000e-14 89.8
21 TraesCS6D01G245400 chr5B 90.551 127 12 0 4205 4331 693185155 693185029 9.490000e-38 169.0
22 TraesCS6D01G245400 chr5B 95.312 64 2 1 2952 3014 281583084 281583021 3.510000e-17 100.0
23 TraesCS6D01G245400 chr5D 89.764 127 13 0 4205 4331 558973779 558973653 4.420000e-36 163.0
24 TraesCS6D01G245400 chr3D 88.189 127 15 0 4205 4331 467322144 467322018 9.560000e-33 152.0
25 TraesCS6D01G245400 chr3D 96.429 56 2 0 2958 3013 431291628 431291683 5.880000e-15 93.5
26 TraesCS6D01G245400 chr7B 98.182 55 1 0 2959 3013 594214536 594214590 4.540000e-16 97.1
27 TraesCS6D01G245400 chrUn 96.226 53 2 0 2962 3014 159641978 159641926 2.730000e-13 87.9
28 TraesCS6D01G245400 chrUn 96.226 53 2 0 2962 3014 336888307 336888255 2.730000e-13 87.9
29 TraesCS6D01G245400 chr1A 96.774 31 1 0 2575 2605 547393871 547393901 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G245400 chr6D 347677284 347682792 5508 False 10174.00 10174 100.00000 1 5509 1 chr6D.!!$F1 5508
1 TraesCS6D01G245400 chr6A 495691073 495697066 5993 True 1600.75 2848 90.30000 6 5388 4 chr6A.!!$R3 5382
2 TraesCS6D01G245400 chr6B 532343691 532348420 4729 True 1530.75 2645 89.15125 1 4830 4 chr6B.!!$R1 4829

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 155 0.034186 TCACCATCATCCTTGCACCC 60.034 55.0 0.00 0.00 0.00 4.61 F
954 996 0.839853 AAGCAGAGCAGGGGAGAAGT 60.840 55.0 0.00 0.00 0.00 3.01 F
1560 1640 0.106669 GTCAAGGCCCAGGGGAATAC 60.107 60.0 7.91 0.00 37.50 1.89 F
2676 2861 0.179081 GAGATTGTACGCCTCACCCC 60.179 60.0 4.68 0.00 0.00 4.95 F
2943 3172 0.830648 TTGGGTCCTAATCGAGCAGG 59.169 55.0 8.48 8.48 31.74 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1379 1436 0.107410 TGTTGTGCTCCCTCGTGTTT 60.107 50.0 0.00 0.0 0.00 2.83 R
2049 2178 0.249447 CTCGAGGCGTGCCATGATAA 60.249 55.0 14.29 0.0 38.92 1.75 R
2678 2863 0.398696 ACCACTACCACATTTGCCGA 59.601 50.0 0.00 0.0 0.00 5.54 R
3581 3842 0.169009 GCACAAACCTGAAGCGGATC 59.831 55.0 0.00 0.0 0.00 3.36 R
4518 4796 0.321671 TAGCTGCTTCAGTGGTGTCC 59.678 55.0 7.79 0.0 33.43 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 61 0.473326 GAGCCTACCCGTCCTCTCTA 59.527 60.000 0.00 0.00 0.00 2.43
55 63 1.174078 GCCTACCCGTCCTCTCTAGC 61.174 65.000 0.00 0.00 0.00 3.42
56 64 0.537828 CCTACCCGTCCTCTCTAGCC 60.538 65.000 0.00 0.00 0.00 3.93
57 65 0.537828 CTACCCGTCCTCTCTAGCCC 60.538 65.000 0.00 0.00 0.00 5.19
61 69 3.597728 GTCCTCTCTAGCCCGCCG 61.598 72.222 0.00 0.00 0.00 6.46
127 139 1.000955 CCGGTAGCACCCTATCATCAC 59.999 57.143 0.00 0.00 33.75 3.06
143 155 0.034186 TCACCATCATCCTTGCACCC 60.034 55.000 0.00 0.00 0.00 4.61
201 214 1.445754 CCGCTGCTCTCTGTCTGTG 60.446 63.158 0.00 0.00 0.00 3.66
219 232 1.119684 TGCATAGCCTGTGGTACGAT 58.880 50.000 0.00 0.00 0.00 3.73
220 233 2.035449 GTGCATAGCCTGTGGTACGATA 59.965 50.000 0.00 0.00 0.00 2.92
221 234 2.035449 TGCATAGCCTGTGGTACGATAC 59.965 50.000 0.00 0.00 0.00 2.24
222 235 2.035449 GCATAGCCTGTGGTACGATACA 59.965 50.000 0.00 0.00 0.00 2.29
223 236 3.491964 GCATAGCCTGTGGTACGATACAA 60.492 47.826 0.00 0.00 0.00 2.41
292 305 4.286320 CTACCGCGCAGGGCCTAG 62.286 72.222 19.73 4.50 46.96 3.02
562 594 1.623163 CGTTTAAGGAGGCCCCAAAA 58.377 50.000 12.24 9.09 37.41 2.44
572 604 3.614698 CCCCAAAAGCTGCGGCAA 61.615 61.111 21.93 0.00 41.70 4.52
829 865 5.163426 TGGAACTTCTTAACCACTCGTTGTA 60.163 40.000 0.00 0.00 35.79 2.41
848 884 6.417635 CGTTGTACATTTCAGTTGCATTTTCT 59.582 34.615 0.00 0.00 0.00 2.52
954 996 0.839853 AAGCAGAGCAGGGGAGAAGT 60.840 55.000 0.00 0.00 0.00 3.01
966 1008 1.600912 GGGAGAAGTAAGCGATCGAGC 60.601 57.143 21.57 1.03 37.41 5.03
987 1029 4.735132 CGGCGGGCGTGAAAGAGA 62.735 66.667 16.48 0.00 0.00 3.10
988 1030 2.815647 GGCGGGCGTGAAAGAGAG 60.816 66.667 0.00 0.00 0.00 3.20
989 1031 2.261671 GCGGGCGTGAAAGAGAGA 59.738 61.111 0.00 0.00 0.00 3.10
1120 1162 3.387716 AGGTATGCCTGTCGTGCA 58.612 55.556 0.00 0.00 45.05 4.57
1122 1164 2.452813 GGTATGCCTGTCGTGCACG 61.453 63.158 32.76 32.76 42.38 5.34
1124 1166 3.581687 TATGCCTGTCGTGCACGCA 62.582 57.895 33.63 29.44 42.38 5.24
1133 1175 1.129251 GTCGTGCACGCAGTAGTACTA 59.871 52.381 33.63 10.20 41.61 1.82
1181 1226 5.345202 CCTACTCACTTAGTGTTTTGCTACG 59.655 44.000 12.41 0.00 39.39 3.51
1267 1317 3.106242 TCTGCTTTTTCTGCTCGTACA 57.894 42.857 0.00 0.00 0.00 2.90
1268 1318 2.800544 TCTGCTTTTTCTGCTCGTACAC 59.199 45.455 0.00 0.00 0.00 2.90
1273 1323 2.089887 TTTCTGCTCGTACACGGCCA 62.090 55.000 2.24 0.00 40.29 5.36
1361 1418 2.438975 CGCCACCATGCATGTCCT 60.439 61.111 24.58 4.51 0.00 3.85
1364 1421 1.952102 GCCACCATGCATGTCCTTGG 61.952 60.000 24.58 22.58 36.42 3.61
1371 1428 1.630223 TGCATGTCCTTGGCATTTGA 58.370 45.000 0.00 0.00 31.58 2.69
1372 1429 1.969208 TGCATGTCCTTGGCATTTGAA 59.031 42.857 0.00 0.00 31.58 2.69
1401 1458 1.069765 ACGAGGGAGCACAACAGTG 59.930 57.895 0.00 0.00 36.35 3.66
1413 1492 3.453424 CACAACAGTGCACTACTACACA 58.547 45.455 21.20 0.00 37.60 3.72
1414 1493 3.490896 CACAACAGTGCACTACTACACAG 59.509 47.826 21.20 7.04 37.60 3.66
1415 1494 3.132289 ACAACAGTGCACTACTACACAGT 59.868 43.478 21.20 7.77 37.60 3.55
1416 1495 4.340097 ACAACAGTGCACTACTACACAGTA 59.660 41.667 21.20 0.00 37.60 2.74
1426 1505 2.095415 TACTACACAGTAGCACACAGCG 60.095 50.000 4.20 0.00 41.57 5.18
1560 1640 0.106669 GTCAAGGCCCAGGGGAATAC 60.107 60.000 7.91 0.00 37.50 1.89
1696 1788 1.500512 TTCGCACTTGGTACCGTTGC 61.501 55.000 17.97 17.97 0.00 4.17
1716 1808 2.059541 CTTGTTCGTCCGTCCTCTTTC 58.940 52.381 0.00 0.00 0.00 2.62
1759 1851 1.315690 CACACATGATGGGAGATGCC 58.684 55.000 0.00 0.00 30.67 4.40
1775 1868 0.251742 TGCCAATGGGGTCTTTCCAG 60.252 55.000 0.00 0.00 37.75 3.86
1776 1869 0.972471 GCCAATGGGGTCTTTCCAGG 60.972 60.000 0.00 0.00 37.75 4.45
1777 1870 0.704076 CCAATGGGGTCTTTCCAGGA 59.296 55.000 0.00 0.00 37.75 3.86
1796 1889 1.131315 GATGGAAAGACGCTCTTTGGC 59.869 52.381 14.84 4.89 45.85 4.52
1809 1902 3.119352 GCTCTTTGGCTGATTTAACCCTG 60.119 47.826 0.00 0.00 0.00 4.45
1834 1927 4.700213 GCTTTACTCTTCCAAGCCAATACA 59.300 41.667 0.00 0.00 37.54 2.29
1838 1931 7.859325 TTACTCTTCCAAGCCAATACAATAC 57.141 36.000 0.00 0.00 0.00 1.89
1840 1933 6.116126 ACTCTTCCAAGCCAATACAATACTC 58.884 40.000 0.00 0.00 0.00 2.59
1848 1941 7.445121 CAAGCCAATACAATACTCCTCTATCA 58.555 38.462 0.00 0.00 0.00 2.15
1849 1942 6.998802 AGCCAATACAATACTCCTCTATCAC 58.001 40.000 0.00 0.00 0.00 3.06
1850 1943 6.014156 AGCCAATACAATACTCCTCTATCACC 60.014 42.308 0.00 0.00 0.00 4.02
1851 1944 6.014156 GCCAATACAATACTCCTCTATCACCT 60.014 42.308 0.00 0.00 0.00 4.00
1852 1945 7.473511 GCCAATACAATACTCCTCTATCACCTT 60.474 40.741 0.00 0.00 0.00 3.50
1935 2042 2.159240 CGTAGTAGCAGCACTCATTCCA 60.159 50.000 0.00 0.00 0.00 3.53
1942 2049 1.064906 CAGCACTCATTCCATGGTCCT 60.065 52.381 12.58 0.00 0.00 3.85
1943 2050 1.637553 AGCACTCATTCCATGGTCCTT 59.362 47.619 12.58 0.00 0.00 3.36
1944 2051 2.846206 AGCACTCATTCCATGGTCCTTA 59.154 45.455 12.58 0.00 0.00 2.69
1945 2052 2.945668 GCACTCATTCCATGGTCCTTAC 59.054 50.000 12.58 0.00 0.00 2.34
1946 2053 3.622206 GCACTCATTCCATGGTCCTTACA 60.622 47.826 12.58 0.00 0.00 2.41
1964 2071 3.600448 ACATTACATGGGCTTGGCTAT 57.400 42.857 0.00 0.00 33.60 2.97
2022 2151 3.590714 TCCATCCATCTCTGCCTTATCA 58.409 45.455 0.00 0.00 0.00 2.15
2023 2152 4.173594 TCCATCCATCTCTGCCTTATCAT 58.826 43.478 0.00 0.00 0.00 2.45
2024 2153 4.600547 TCCATCCATCTCTGCCTTATCATT 59.399 41.667 0.00 0.00 0.00 2.57
2025 2154 5.074102 TCCATCCATCTCTGCCTTATCATTT 59.926 40.000 0.00 0.00 0.00 2.32
2026 2155 5.183331 CCATCCATCTCTGCCTTATCATTTG 59.817 44.000 0.00 0.00 0.00 2.32
2027 2156 5.378230 TCCATCTCTGCCTTATCATTTGT 57.622 39.130 0.00 0.00 0.00 2.83
2028 2157 5.371526 TCCATCTCTGCCTTATCATTTGTC 58.628 41.667 0.00 0.00 0.00 3.18
2029 2158 5.131642 TCCATCTCTGCCTTATCATTTGTCT 59.868 40.000 0.00 0.00 0.00 3.41
2030 2159 5.469421 CCATCTCTGCCTTATCATTTGTCTC 59.531 44.000 0.00 0.00 0.00 3.36
2031 2160 5.682234 TCTCTGCCTTATCATTTGTCTCA 57.318 39.130 0.00 0.00 0.00 3.27
2032 2161 6.053632 TCTCTGCCTTATCATTTGTCTCAA 57.946 37.500 0.00 0.00 0.00 3.02
2033 2162 6.475504 TCTCTGCCTTATCATTTGTCTCAAA 58.524 36.000 0.00 0.00 0.00 2.69
2034 2163 6.942005 TCTCTGCCTTATCATTTGTCTCAAAA 59.058 34.615 0.00 0.00 0.00 2.44
2035 2164 7.448161 TCTCTGCCTTATCATTTGTCTCAAAAA 59.552 33.333 0.00 0.00 0.00 1.94
2036 2165 7.370383 TCTGCCTTATCATTTGTCTCAAAAAC 58.630 34.615 0.00 0.00 0.00 2.43
2037 2166 7.014134 TCTGCCTTATCATTTGTCTCAAAAACA 59.986 33.333 0.00 0.00 0.00 2.83
2038 2167 7.495901 TGCCTTATCATTTGTCTCAAAAACAA 58.504 30.769 0.00 0.00 34.93 2.83
2040 2169 8.825745 GCCTTATCATTTGTCTCAAAAACAAAA 58.174 29.630 5.62 0.00 46.38 2.44
2045 2174 9.657419 ATCATTTGTCTCAAAAACAAAAACTCT 57.343 25.926 5.62 0.00 46.38 3.24
2046 2175 8.924691 TCATTTGTCTCAAAAACAAAAACTCTG 58.075 29.630 5.62 0.64 46.38 3.35
2047 2176 6.704512 TTGTCTCAAAAACAAAAACTCTGC 57.295 33.333 0.00 0.00 33.86 4.26
2048 2177 4.856487 TGTCTCAAAAACAAAAACTCTGCG 59.144 37.500 0.00 0.00 0.00 5.18
2049 2178 4.857037 GTCTCAAAAACAAAAACTCTGCGT 59.143 37.500 0.00 0.00 0.00 5.24
2050 2179 5.344933 GTCTCAAAAACAAAAACTCTGCGTT 59.655 36.000 0.00 0.00 37.47 4.84
2051 2180 6.525280 GTCTCAAAAACAAAAACTCTGCGTTA 59.475 34.615 0.00 0.00 33.90 3.18
2052 2181 7.220108 GTCTCAAAAACAAAAACTCTGCGTTAT 59.780 33.333 0.00 0.00 33.90 1.89
2053 2182 7.431084 TCTCAAAAACAAAAACTCTGCGTTATC 59.569 33.333 0.00 0.00 33.90 1.75
2079 2208 1.012486 CGCCTCGAGTGTTTACCACC 61.012 60.000 12.31 0.00 45.74 4.61
2086 2215 2.140717 GAGTGTTTACCACCGTCCTTG 58.859 52.381 0.00 0.00 45.74 3.61
2136 2270 7.096065 GCCTTTTGCAATCAGTTAAAGTACAAG 60.096 37.037 0.00 0.00 40.77 3.16
2200 2334 0.947660 CTGATCATGATCGGCACCGG 60.948 60.000 27.36 0.00 40.63 5.28
2201 2335 2.281070 ATCATGATCGGCACCGGC 60.281 61.111 9.58 2.64 40.25 6.13
2202 2336 2.721971 GATCATGATCGGCACCGGCT 62.722 60.000 19.55 0.00 40.87 5.52
2360 2497 1.290009 GGCGAAAATGTGCTGCCTT 59.710 52.632 0.00 0.00 42.44 4.35
2393 2533 6.536582 TCCTACTACTACTAGTTACAACAGCG 59.463 42.308 0.00 0.00 34.79 5.18
2461 2604 1.068588 TGAATTATCGCGCACTAGGCT 59.931 47.619 8.75 0.00 41.67 4.58
2480 2623 2.479656 GCTCGATCTTGATGCTTGATCC 59.520 50.000 0.00 0.00 34.70 3.36
2604 2751 1.494721 GGGAAATATCAGGTGCTCCCA 59.505 52.381 0.00 0.00 41.91 4.37
2625 2772 5.319453 CCAATGCTTAGGTGATACCATGAT 58.681 41.667 0.00 0.00 41.95 2.45
2626 2773 5.182570 CCAATGCTTAGGTGATACCATGATG 59.817 44.000 0.00 0.00 41.95 3.07
2629 2776 3.999663 GCTTAGGTGATACCATGATGAGC 59.000 47.826 0.00 0.00 41.95 4.26
2630 2777 4.573900 CTTAGGTGATACCATGATGAGCC 58.426 47.826 0.00 0.00 41.95 4.70
2631 2778 1.345741 AGGTGATACCATGATGAGCCG 59.654 52.381 0.00 0.00 41.95 5.52
2634 2781 2.545526 GTGATACCATGATGAGCCGTTG 59.454 50.000 0.00 0.00 0.00 4.10
2636 2783 1.199615 TACCATGATGAGCCGTTGGA 58.800 50.000 0.00 0.00 0.00 3.53
2637 2784 0.327924 ACCATGATGAGCCGTTGGAA 59.672 50.000 0.00 0.00 0.00 3.53
2638 2785 0.734889 CCATGATGAGCCGTTGGAAC 59.265 55.000 0.00 0.00 0.00 3.62
2654 2839 6.567769 GTTGGAACGGCATACAAATAAATG 57.432 37.500 0.00 0.00 0.00 2.32
2667 2852 9.373750 CATACAAATAAATGCAGAGATTGTACG 57.626 33.333 13.59 5.80 35.40 3.67
2668 2853 6.258160 ACAAATAAATGCAGAGATTGTACGC 58.742 36.000 0.00 0.00 0.00 4.42
2672 2857 0.894835 TGCAGAGATTGTACGCCTCA 59.105 50.000 10.32 0.00 0.00 3.86
2676 2861 0.179081 GAGATTGTACGCCTCACCCC 60.179 60.000 4.68 0.00 0.00 4.95
2677 2862 1.520787 GATTGTACGCCTCACCCCG 60.521 63.158 0.00 0.00 0.00 5.73
2678 2863 2.234913 GATTGTACGCCTCACCCCGT 62.235 60.000 0.00 0.00 41.11 5.28
2706 2891 2.897350 TGTGGTAGTGGTGGTGTCTAT 58.103 47.619 0.00 0.00 0.00 1.98
2707 2892 3.244582 TGTGGTAGTGGTGGTGTCTATT 58.755 45.455 0.00 0.00 0.00 1.73
2709 2894 3.007614 GTGGTAGTGGTGGTGTCTATTGT 59.992 47.826 0.00 0.00 0.00 2.71
2710 2895 4.221262 GTGGTAGTGGTGGTGTCTATTGTA 59.779 45.833 0.00 0.00 0.00 2.41
2711 2896 4.221262 TGGTAGTGGTGGTGTCTATTGTAC 59.779 45.833 0.00 0.00 0.00 2.90
2713 2898 4.803098 AGTGGTGGTGTCTATTGTACTC 57.197 45.455 0.00 0.00 0.00 2.59
2714 2899 4.417437 AGTGGTGGTGTCTATTGTACTCT 58.583 43.478 0.00 0.00 0.00 3.24
2715 2900 4.838986 AGTGGTGGTGTCTATTGTACTCTT 59.161 41.667 0.00 0.00 0.00 2.85
2716 2901 5.047235 AGTGGTGGTGTCTATTGTACTCTTC 60.047 44.000 0.00 0.00 0.00 2.87
2717 2902 5.047235 GTGGTGGTGTCTATTGTACTCTTCT 60.047 44.000 0.00 0.00 0.00 2.85
2718 2903 5.185249 TGGTGGTGTCTATTGTACTCTTCTC 59.815 44.000 0.00 0.00 0.00 2.87
2719 2904 5.419471 GGTGGTGTCTATTGTACTCTTCTCT 59.581 44.000 0.00 0.00 0.00 3.10
2720 2905 6.404954 GGTGGTGTCTATTGTACTCTTCTCTC 60.405 46.154 0.00 0.00 0.00 3.20
2721 2906 6.376018 GTGGTGTCTATTGTACTCTTCTCTCT 59.624 42.308 0.00 0.00 0.00 3.10
2722 2907 6.600032 TGGTGTCTATTGTACTCTTCTCTCTC 59.400 42.308 0.00 0.00 0.00 3.20
2723 2908 6.238266 GGTGTCTATTGTACTCTTCTCTCTCG 60.238 46.154 0.00 0.00 0.00 4.04
2724 2909 5.818336 TGTCTATTGTACTCTTCTCTCTCGG 59.182 44.000 0.00 0.00 0.00 4.63
2725 2910 5.237779 GTCTATTGTACTCTTCTCTCTCGGG 59.762 48.000 0.00 0.00 0.00 5.14
2726 2911 2.421751 TGTACTCTTCTCTCTCGGGG 57.578 55.000 0.00 0.00 0.00 5.73
2727 2912 1.914108 TGTACTCTTCTCTCTCGGGGA 59.086 52.381 0.00 0.00 0.00 4.81
2728 2913 2.092861 TGTACTCTTCTCTCTCGGGGAG 60.093 54.545 0.00 0.00 43.12 4.30
2815 3038 1.686355 TTGATTGCGGGGCGAAATAT 58.314 45.000 0.00 0.00 35.00 1.28
2916 3145 2.737376 AGCGTTCCTTTCGTCCGC 60.737 61.111 0.00 0.00 44.35 5.54
2943 3172 0.830648 TTGGGTCCTAATCGAGCAGG 59.169 55.000 8.48 8.48 31.74 4.85
2959 3195 9.778741 AATCGAGCAGGATTAATTAATTAGTCA 57.221 29.630 24.04 6.76 34.96 3.41
2960 3196 8.818141 TCGAGCAGGATTAATTAATTAGTCAG 57.182 34.615 24.04 18.47 32.54 3.51
2961 3197 8.421784 TCGAGCAGGATTAATTAATTAGTCAGT 58.578 33.333 24.04 13.01 32.54 3.41
2962 3198 9.046296 CGAGCAGGATTAATTAATTAGTCAGTT 57.954 33.333 24.04 16.60 32.54 3.16
2975 3211 9.772973 TTAATTAGTCAGTTTTGCTAAGTCTCA 57.227 29.630 0.00 0.00 31.35 3.27
2976 3212 7.897575 ATTAGTCAGTTTTGCTAAGTCTCAG 57.102 36.000 0.00 0.00 31.35 3.35
2977 3213 5.283457 AGTCAGTTTTGCTAAGTCTCAGT 57.717 39.130 0.00 0.00 0.00 3.41
2978 3214 5.293560 AGTCAGTTTTGCTAAGTCTCAGTC 58.706 41.667 0.00 0.00 0.00 3.51
2979 3215 4.149046 GTCAGTTTTGCTAAGTCTCAGTCG 59.851 45.833 0.00 0.00 0.00 4.18
2980 3216 4.037565 TCAGTTTTGCTAAGTCTCAGTCGA 59.962 41.667 0.00 0.00 0.00 4.20
2981 3217 4.149046 CAGTTTTGCTAAGTCTCAGTCGAC 59.851 45.833 7.70 7.70 0.00 4.20
2982 3218 4.038162 AGTTTTGCTAAGTCTCAGTCGACT 59.962 41.667 13.58 13.58 45.73 4.18
2983 3219 3.560902 TTGCTAAGTCTCAGTCGACTG 57.439 47.619 34.76 34.76 43.14 3.51
2984 3220 1.813178 TGCTAAGTCTCAGTCGACTGG 59.187 52.381 37.82 28.95 43.14 4.00
2985 3221 1.133407 GCTAAGTCTCAGTCGACTGGG 59.867 57.143 37.82 36.48 45.72 4.45
2989 3225 3.747735 TCTCAGTCGACTGGGACTT 57.252 52.632 38.15 4.58 45.72 3.01
2990 3226 1.996798 TCTCAGTCGACTGGGACTTT 58.003 50.000 38.15 3.76 45.72 2.66
2991 3227 1.613925 TCTCAGTCGACTGGGACTTTG 59.386 52.381 38.15 20.95 45.72 2.77
2992 3228 1.410004 TCAGTCGACTGGGACTTTGT 58.590 50.000 37.82 3.17 44.65 2.83
2993 3229 1.760613 TCAGTCGACTGGGACTTTGTT 59.239 47.619 37.82 2.61 44.65 2.83
2994 3230 2.960384 TCAGTCGACTGGGACTTTGTTA 59.040 45.455 37.82 17.22 44.65 2.41
2995 3231 3.576982 TCAGTCGACTGGGACTTTGTTAT 59.423 43.478 37.82 1.93 44.65 1.89
2996 3232 3.679980 CAGTCGACTGGGACTTTGTTATG 59.320 47.826 33.36 7.43 44.65 1.90
2997 3233 3.323979 AGTCGACTGGGACTTTGTTATGT 59.676 43.478 19.30 0.00 44.65 2.29
2998 3234 3.678548 GTCGACTGGGACTTTGTTATGTC 59.321 47.826 8.70 0.00 34.09 3.06
2999 3235 3.576982 TCGACTGGGACTTTGTTATGTCT 59.423 43.478 0.00 0.00 34.01 3.41
3000 3236 3.927142 CGACTGGGACTTTGTTATGTCTC 59.073 47.826 0.00 0.00 34.49 3.36
3001 3237 4.560716 CGACTGGGACTTTGTTATGTCTCA 60.561 45.833 0.00 0.00 40.88 3.27
3003 3239 4.974645 TGGGACTTTGTTATGTCTCAGT 57.025 40.909 0.00 0.00 38.59 3.41
3004 3240 4.894784 TGGGACTTTGTTATGTCTCAGTC 58.105 43.478 0.00 0.00 38.59 3.51
3005 3241 3.927142 GGGACTTTGTTATGTCTCAGTCG 59.073 47.826 0.00 0.00 34.10 4.18
3006 3242 4.321750 GGGACTTTGTTATGTCTCAGTCGA 60.322 45.833 0.00 0.00 34.10 4.20
3007 3243 5.411781 GGACTTTGTTATGTCTCAGTCGAT 58.588 41.667 0.00 0.00 34.01 3.59
3008 3244 5.289675 GGACTTTGTTATGTCTCAGTCGATG 59.710 44.000 0.00 0.00 34.01 3.84
3009 3245 4.627467 ACTTTGTTATGTCTCAGTCGATGC 59.373 41.667 0.00 0.00 0.00 3.91
3010 3246 4.456280 TTGTTATGTCTCAGTCGATGCT 57.544 40.909 0.00 0.00 0.00 3.79
3011 3247 5.576447 TTGTTATGTCTCAGTCGATGCTA 57.424 39.130 0.00 0.00 0.00 3.49
3047 3288 4.942483 TCCCTTCGCTAGTACTATATGCTC 59.058 45.833 2.33 0.00 0.00 4.26
3048 3289 4.201832 CCCTTCGCTAGTACTATATGCTCG 60.202 50.000 2.33 1.60 0.00 5.03
3049 3290 4.336101 CTTCGCTAGTACTATATGCTCGC 58.664 47.826 2.33 0.60 0.00 5.03
3052 3293 3.125487 CGCTAGTACTATATGCTCGCACT 59.875 47.826 2.33 0.00 32.08 4.40
3053 3294 4.329256 CGCTAGTACTATATGCTCGCACTA 59.671 45.833 2.33 0.00 32.08 2.74
3581 3842 3.423154 GGCAACGACCTCAAGCGG 61.423 66.667 0.00 0.00 0.00 5.52
3607 3868 0.953471 TTCAGGTTTGTGCCGATCGG 60.953 55.000 30.03 30.03 38.57 4.18
3642 3903 2.225255 GCCGGTATCGTTAGTAGAGACC 59.775 54.545 1.90 0.37 44.17 3.85
3650 3911 3.869832 TCGTTAGTAGAGACCGAGTGATG 59.130 47.826 0.00 0.00 0.00 3.07
3673 3934 5.474189 TGATGATGAACTGATGAAGCAACAA 59.526 36.000 0.00 0.00 0.00 2.83
3860 4121 1.519408 CCTTCCAATTCCACGTCGTT 58.481 50.000 0.00 0.00 0.00 3.85
3866 4127 2.609491 CCAATTCCACGTCGTTCTCTCA 60.609 50.000 0.00 0.00 0.00 3.27
3886 4147 1.358877 TTTCATCCGTGTGCTGATCG 58.641 50.000 0.00 0.00 0.00 3.69
3895 4156 2.472886 CGTGTGCTGATCGTCATTTGAC 60.473 50.000 0.46 0.46 41.47 3.18
3910 4171 1.658686 TTGACACCGTGGGTTTGCAC 61.659 55.000 3.03 0.00 31.02 4.57
3943 4204 1.944676 GTCATTCTACTCCCGCGCG 60.945 63.158 25.67 25.67 0.00 6.86
4109 4373 2.358582 CACCACTTCAACATGCTCAACA 59.641 45.455 0.00 0.00 0.00 3.33
4114 4378 1.440850 CAACATGCTCAACACGGCG 60.441 57.895 4.80 4.80 0.00 6.46
4366 4639 2.501602 GGCCACCTTTGCTGTTGCT 61.502 57.895 0.00 0.00 40.48 3.91
4530 4808 2.741092 GAGCGGGACACCACTGAA 59.259 61.111 0.00 0.00 36.13 3.02
4531 4809 1.374758 GAGCGGGACACCACTGAAG 60.375 63.158 0.00 0.00 36.13 3.02
4562 4848 1.800586 GTACGTACGTCAGGTGACTCA 59.199 52.381 26.53 0.00 42.66 3.41
4568 4854 1.587054 GTCAGGTGACTCAGGTCCG 59.413 63.158 2.72 0.00 41.47 4.79
4570 4856 1.606601 CAGGTGACTCAGGTCCGGA 60.607 63.158 0.00 0.00 41.47 5.14
4571 4857 0.972983 CAGGTGACTCAGGTCCGGAT 60.973 60.000 7.81 0.00 41.47 4.18
4641 4932 2.666989 GCTAGTGCTGCCGTTAGTC 58.333 57.895 0.00 0.00 36.03 2.59
4676 4968 1.315257 GCGGCAGGTTGATGGTTCAT 61.315 55.000 0.00 0.00 0.00 2.57
4787 5085 7.009174 GTGAATGTGTGATTCGTTTGTTTCTTT 59.991 33.333 0.00 0.00 0.00 2.52
4788 5086 6.810888 ATGTGTGATTCGTTTGTTTCTTTG 57.189 33.333 0.00 0.00 0.00 2.77
4789 5087 5.704888 TGTGTGATTCGTTTGTTTCTTTGT 58.295 33.333 0.00 0.00 0.00 2.83
4792 5090 7.808381 TGTGTGATTCGTTTGTTTCTTTGTTTA 59.192 29.630 0.00 0.00 0.00 2.01
4842 5140 5.446473 CCTTCGATGTGCTTAAATCTCACAC 60.446 44.000 0.00 0.00 42.59 3.82
4850 5148 4.149922 TGCTTAAATCTCACACGAACTTCG 59.850 41.667 9.68 9.68 46.93 3.79
4868 5166 3.302365 TCGTAACGGTAAGAAACAGGG 57.698 47.619 0.00 0.00 0.00 4.45
4869 5167 1.728425 CGTAACGGTAAGAAACAGGGC 59.272 52.381 0.00 0.00 0.00 5.19
4873 5171 1.951602 ACGGTAAGAAACAGGGCAAAC 59.048 47.619 0.00 0.00 0.00 2.93
4875 5173 2.359531 CGGTAAGAAACAGGGCAAACAA 59.640 45.455 0.00 0.00 0.00 2.83
4878 5176 4.749598 GGTAAGAAACAGGGCAAACAAATG 59.250 41.667 0.00 0.00 0.00 2.32
4880 5178 5.606348 AAGAAACAGGGCAAACAAATGTA 57.394 34.783 0.00 0.00 0.00 2.29
4881 5179 5.806654 AGAAACAGGGCAAACAAATGTAT 57.193 34.783 0.00 0.00 0.00 2.29
4882 5180 6.909550 AGAAACAGGGCAAACAAATGTATA 57.090 33.333 0.00 0.00 0.00 1.47
4883 5181 6.924111 AGAAACAGGGCAAACAAATGTATAG 58.076 36.000 0.00 0.00 0.00 1.31
4884 5182 6.719370 AGAAACAGGGCAAACAAATGTATAGA 59.281 34.615 0.00 0.00 0.00 1.98
4886 5184 7.480760 AACAGGGCAAACAAATGTATAGATT 57.519 32.000 0.00 0.00 0.00 2.40
4890 5188 7.068103 CAGGGCAAACAAATGTATAGATTGGTA 59.932 37.037 3.17 0.00 0.00 3.25
4893 5191 8.466798 GGCAAACAAATGTATAGATTGGTAAGT 58.533 33.333 3.17 0.00 0.00 2.24
4894 5192 9.855021 GCAAACAAATGTATAGATTGGTAAGTT 57.145 29.630 3.17 0.00 0.00 2.66
4896 5194 9.855021 AAACAAATGTATAGATTGGTAAGTTGC 57.145 29.630 3.17 0.00 0.00 4.17
4897 5195 7.996385 ACAAATGTATAGATTGGTAAGTTGCC 58.004 34.615 2.51 2.51 0.00 4.52
4898 5196 7.834181 ACAAATGTATAGATTGGTAAGTTGCCT 59.166 33.333 11.57 0.00 0.00 4.75
4899 5197 7.807977 AATGTATAGATTGGTAAGTTGCCTG 57.192 36.000 11.57 0.00 0.00 4.85
4900 5198 6.553953 TGTATAGATTGGTAAGTTGCCTGA 57.446 37.500 11.57 0.58 0.00 3.86
4902 5200 7.398829 TGTATAGATTGGTAAGTTGCCTGAAA 58.601 34.615 11.57 0.00 0.00 2.69
4903 5201 7.885922 TGTATAGATTGGTAAGTTGCCTGAAAA 59.114 33.333 11.57 0.00 0.00 2.29
4904 5202 5.712152 AGATTGGTAAGTTGCCTGAAAAG 57.288 39.130 11.57 0.00 0.00 2.27
4905 5203 4.524328 AGATTGGTAAGTTGCCTGAAAAGG 59.476 41.667 11.57 0.00 0.00 3.11
4906 5204 3.586470 TGGTAAGTTGCCTGAAAAGGA 57.414 42.857 11.57 0.00 0.00 3.36
4907 5205 3.904717 TGGTAAGTTGCCTGAAAAGGAA 58.095 40.909 11.57 0.00 0.00 3.36
4909 5207 4.898861 TGGTAAGTTGCCTGAAAAGGAAAT 59.101 37.500 11.57 0.00 0.00 2.17
4914 5589 3.110447 TGCCTGAAAAGGAAATTGTGC 57.890 42.857 0.00 0.00 0.00 4.57
4917 5592 3.656559 CCTGAAAAGGAAATTGTGCCAG 58.343 45.455 0.00 0.00 0.00 4.85
4924 5599 1.478105 GGAAATTGTGCCAGGGACATC 59.522 52.381 15.62 9.57 0.00 3.06
4936 5611 3.195825 CCAGGGACATCGAGTTTCTAGTT 59.804 47.826 0.00 0.00 0.00 2.24
4941 5616 5.159209 GGACATCGAGTTTCTAGTTTCGAA 58.841 41.667 0.00 0.00 44.11 3.71
4948 5623 5.108330 CGAGTTTCTAGTTTCGAACTCACAC 60.108 44.000 13.48 0.00 41.77 3.82
4968 5978 3.320879 CTCCGGGTGCATGTGAGCT 62.321 63.158 0.00 0.00 34.99 4.09
4969 5979 2.360350 CCGGGTGCATGTGAGCTT 60.360 61.111 0.00 0.00 34.99 3.74
4978 5988 2.093816 TGCATGTGAGCTTGAGACTAGG 60.094 50.000 0.00 0.00 34.99 3.02
4990 6007 4.238761 TGAGACTAGGAACACACTTTCG 57.761 45.455 0.00 0.00 0.00 3.46
4998 6015 1.002792 GAACACACTTTCGTTGAGCCC 60.003 52.381 0.00 0.00 0.00 5.19
5014 6031 1.911471 CCCTTCCTTCTCCCTCTGC 59.089 63.158 0.00 0.00 0.00 4.26
5015 6032 0.911525 CCCTTCCTTCTCCCTCTGCA 60.912 60.000 0.00 0.00 0.00 4.41
5036 6053 4.807643 GCACTTTCTTCCTACTCCAACCAT 60.808 45.833 0.00 0.00 0.00 3.55
5038 6055 4.846940 ACTTTCTTCCTACTCCAACCATCT 59.153 41.667 0.00 0.00 0.00 2.90
5039 6056 5.310857 ACTTTCTTCCTACTCCAACCATCTT 59.689 40.000 0.00 0.00 0.00 2.40
5048 6065 7.182026 TCCTACTCCAACCATCTTTTCATTAGA 59.818 37.037 0.00 0.00 0.00 2.10
5055 6072 4.631813 ACCATCTTTTCATTAGACACTCGC 59.368 41.667 0.00 0.00 0.00 5.03
5063 6080 1.760192 TTAGACACTCGCCTCCCTAC 58.240 55.000 0.00 0.00 0.00 3.18
5067 6084 0.544595 ACACTCGCCTCCCTACCTTT 60.545 55.000 0.00 0.00 0.00 3.11
5072 6089 1.687297 CGCCTCCCTACCTTTCCTCC 61.687 65.000 0.00 0.00 0.00 4.30
5074 6091 1.966845 CCTCCCTACCTTTCCTCCAA 58.033 55.000 0.00 0.00 0.00 3.53
5081 6098 0.112412 ACCTTTCCTCCAATTGCGGT 59.888 50.000 0.00 0.00 0.00 5.68
5082 6099 0.811281 CCTTTCCTCCAATTGCGGTC 59.189 55.000 0.00 0.00 0.00 4.79
5106 6123 1.045407 ATTACCTAATCCGAGCGGCA 58.955 50.000 1.45 0.00 34.68 5.69
5112 6129 1.939934 CTAATCCGAGCGGCAATCAAA 59.060 47.619 1.45 0.00 34.68 2.69
5113 6130 1.173043 AATCCGAGCGGCAATCAAAA 58.827 45.000 1.45 0.00 34.68 2.44
5134 6151 1.532604 CGAAAAGCAAACCCCCTCCC 61.533 60.000 0.00 0.00 0.00 4.30
5144 6161 2.683475 CCCCTCCCCCATGTCAAC 59.317 66.667 0.00 0.00 0.00 3.18
5158 6175 0.179108 GTCAACGCTCCGCCTATCTT 60.179 55.000 0.00 0.00 0.00 2.40
5171 6188 2.615912 GCCTATCTTTGGCTAGTGCTTG 59.384 50.000 0.00 0.00 46.38 4.01
5176 6193 2.019984 CTTTGGCTAGTGCTTGATCCC 58.980 52.381 0.00 0.00 39.59 3.85
5180 6197 1.227674 CTAGTGCTTGATCCCGGCC 60.228 63.158 0.00 0.00 0.00 6.13
5225 6242 7.119387 TCCTCCTTTTCTTCTCCCAAATAATC 58.881 38.462 0.00 0.00 0.00 1.75
5234 6251 7.792032 TCTTCTCCCAAATAATCGACTTACAT 58.208 34.615 0.00 0.00 0.00 2.29
5270 6287 8.913487 ATTTTTCTTCTTCAAAATGGAAGCAT 57.087 26.923 0.00 0.00 43.14 3.79
5271 6288 7.718272 TTTTCTTCTTCAAAATGGAAGCATG 57.282 32.000 0.00 0.00 43.14 4.06
5274 6291 4.445452 TCTTCAAAATGGAAGCATGAGC 57.555 40.909 0.00 0.00 43.14 4.26
5318 6335 9.924650 TTAAGAGAAGAATAGAGTTGGTGTTAC 57.075 33.333 0.00 0.00 0.00 2.50
5372 6389 3.881688 CTCTCAAGGCATTATTGACCCTG 59.118 47.826 0.00 0.00 33.28 4.45
5377 6394 5.127519 TCAAGGCATTATTGACCCTGATTTG 59.872 40.000 0.00 0.00 31.86 2.32
5384 6401 1.327303 TGACCCTGATTTGTTGGCAC 58.673 50.000 0.00 0.00 0.00 5.01
5388 6405 0.664166 CCTGATTTGTTGGCACACGC 60.664 55.000 0.00 0.00 39.29 5.34
5389 6406 0.030504 CTGATTTGTTGGCACACGCA 59.969 50.000 0.00 0.00 39.29 5.24
5390 6407 0.030504 TGATTTGTTGGCACACGCAG 59.969 50.000 0.00 0.00 39.29 5.18
5402 6419 4.049393 ACGCAGTGACTCAAAGCC 57.951 55.556 0.00 0.00 42.51 4.35
5403 6420 1.447643 ACGCAGTGACTCAAAGCCT 59.552 52.632 0.00 0.00 42.51 4.58
5404 6421 0.882042 ACGCAGTGACTCAAAGCCTG 60.882 55.000 0.00 0.00 42.51 4.85
5405 6422 0.882042 CGCAGTGACTCAAAGCCTGT 60.882 55.000 0.00 0.00 0.00 4.00
5406 6423 0.871057 GCAGTGACTCAAAGCCTGTC 59.129 55.000 0.00 0.00 0.00 3.51
5407 6424 1.517242 CAGTGACTCAAAGCCTGTCC 58.483 55.000 0.00 0.00 0.00 4.02
5408 6425 1.071385 CAGTGACTCAAAGCCTGTCCT 59.929 52.381 0.00 0.00 0.00 3.85
5409 6426 1.346068 AGTGACTCAAAGCCTGTCCTC 59.654 52.381 0.00 0.00 0.00 3.71
5410 6427 0.318441 TGACTCAAAGCCTGTCCTCG 59.682 55.000 0.00 0.00 0.00 4.63
5411 6428 0.318762 GACTCAAAGCCTGTCCTCGT 59.681 55.000 0.00 0.00 0.00 4.18
5412 6429 0.759346 ACTCAAAGCCTGTCCTCGTT 59.241 50.000 0.00 0.00 0.00 3.85
5413 6430 1.270358 ACTCAAAGCCTGTCCTCGTTC 60.270 52.381 0.00 0.00 0.00 3.95
5414 6431 1.001406 CTCAAAGCCTGTCCTCGTTCT 59.999 52.381 0.00 0.00 0.00 3.01
5415 6432 1.416401 TCAAAGCCTGTCCTCGTTCTT 59.584 47.619 0.00 0.00 0.00 2.52
5416 6433 2.158813 TCAAAGCCTGTCCTCGTTCTTT 60.159 45.455 0.00 0.00 0.00 2.52
5417 6434 3.070446 TCAAAGCCTGTCCTCGTTCTTTA 59.930 43.478 0.00 0.00 0.00 1.85
5418 6435 3.983044 AAGCCTGTCCTCGTTCTTTAT 57.017 42.857 0.00 0.00 0.00 1.40
5419 6436 5.046878 TCAAAGCCTGTCCTCGTTCTTTATA 60.047 40.000 0.00 0.00 0.00 0.98
5420 6437 4.657436 AGCCTGTCCTCGTTCTTTATAG 57.343 45.455 0.00 0.00 0.00 1.31
5421 6438 4.024670 AGCCTGTCCTCGTTCTTTATAGT 58.975 43.478 0.00 0.00 0.00 2.12
5422 6439 4.113354 GCCTGTCCTCGTTCTTTATAGTG 58.887 47.826 0.00 0.00 0.00 2.74
5423 6440 4.381718 GCCTGTCCTCGTTCTTTATAGTGT 60.382 45.833 0.00 0.00 0.00 3.55
5424 6441 5.721232 CCTGTCCTCGTTCTTTATAGTGTT 58.279 41.667 0.00 0.00 0.00 3.32
5425 6442 5.577164 CCTGTCCTCGTTCTTTATAGTGTTG 59.423 44.000 0.00 0.00 0.00 3.33
5426 6443 6.335471 TGTCCTCGTTCTTTATAGTGTTGA 57.665 37.500 0.00 0.00 0.00 3.18
5427 6444 6.387465 TGTCCTCGTTCTTTATAGTGTTGAG 58.613 40.000 0.00 0.00 0.00 3.02
5428 6445 5.288952 GTCCTCGTTCTTTATAGTGTTGAGC 59.711 44.000 0.00 0.00 0.00 4.26
5429 6446 5.047590 TCCTCGTTCTTTATAGTGTTGAGCA 60.048 40.000 0.00 0.00 0.00 4.26
5430 6447 5.637810 CCTCGTTCTTTATAGTGTTGAGCAA 59.362 40.000 0.00 0.00 0.00 3.91
5431 6448 6.147164 CCTCGTTCTTTATAGTGTTGAGCAAA 59.853 38.462 0.00 0.00 0.00 3.68
5432 6449 7.307751 CCTCGTTCTTTATAGTGTTGAGCAAAA 60.308 37.037 0.00 0.00 0.00 2.44
5433 6450 8.094798 TCGTTCTTTATAGTGTTGAGCAAAAT 57.905 30.769 0.00 0.00 0.00 1.82
5434 6451 9.210329 TCGTTCTTTATAGTGTTGAGCAAAATA 57.790 29.630 0.00 0.00 0.00 1.40
5435 6452 9.478019 CGTTCTTTATAGTGTTGAGCAAAATAG 57.522 33.333 0.00 0.00 0.00 1.73
5436 6453 9.774742 GTTCTTTATAGTGTTGAGCAAAATAGG 57.225 33.333 0.00 0.00 0.00 2.57
5437 6454 9.515226 TTCTTTATAGTGTTGAGCAAAATAGGT 57.485 29.630 0.00 0.00 0.00 3.08
5438 6455 8.946085 TCTTTATAGTGTTGAGCAAAATAGGTG 58.054 33.333 0.00 0.00 0.00 4.00
5439 6456 7.624360 TTATAGTGTTGAGCAAAATAGGTGG 57.376 36.000 0.00 0.00 0.00 4.61
5440 6457 4.098914 AGTGTTGAGCAAAATAGGTGGA 57.901 40.909 0.00 0.00 0.00 4.02
5441 6458 4.074970 AGTGTTGAGCAAAATAGGTGGAG 58.925 43.478 0.00 0.00 0.00 3.86
5442 6459 3.191371 GTGTTGAGCAAAATAGGTGGAGG 59.809 47.826 0.00 0.00 0.00 4.30
5443 6460 2.755103 GTTGAGCAAAATAGGTGGAGGG 59.245 50.000 0.00 0.00 0.00 4.30
5444 6461 1.284785 TGAGCAAAATAGGTGGAGGGG 59.715 52.381 0.00 0.00 0.00 4.79
5445 6462 0.631212 AGCAAAATAGGTGGAGGGGG 59.369 55.000 0.00 0.00 0.00 5.40
5459 6476 3.319198 GGGGGCTCTTGTGACGGA 61.319 66.667 0.00 0.00 0.00 4.69
5460 6477 2.747686 GGGGCTCTTGTGACGGAA 59.252 61.111 0.00 0.00 0.00 4.30
5461 6478 1.376037 GGGGCTCTTGTGACGGAAG 60.376 63.158 0.00 0.00 0.00 3.46
5462 6479 1.671742 GGGCTCTTGTGACGGAAGA 59.328 57.895 0.00 0.00 0.00 2.87
5463 6480 0.670854 GGGCTCTTGTGACGGAAGAC 60.671 60.000 0.00 0.00 0.00 3.01
5464 6481 0.033504 GGCTCTTGTGACGGAAGACA 59.966 55.000 0.00 0.00 0.00 3.41
5470 6487 3.544772 TGACGGAAGACACAGCCA 58.455 55.556 0.00 0.00 0.00 4.75
5471 6488 2.057830 TGACGGAAGACACAGCCAT 58.942 52.632 0.00 0.00 0.00 4.40
5472 6489 0.396435 TGACGGAAGACACAGCCATT 59.604 50.000 0.00 0.00 0.00 3.16
5473 6490 1.079503 GACGGAAGACACAGCCATTC 58.920 55.000 0.00 0.00 0.00 2.67
5474 6491 0.321653 ACGGAAGACACAGCCATTCC 60.322 55.000 0.00 0.00 38.26 3.01
5475 6492 0.036010 CGGAAGACACAGCCATTCCT 60.036 55.000 0.00 0.00 39.26 3.36
5476 6493 1.611673 CGGAAGACACAGCCATTCCTT 60.612 52.381 0.00 0.00 39.26 3.36
5477 6494 2.519013 GGAAGACACAGCCATTCCTTT 58.481 47.619 0.00 0.00 38.53 3.11
5478 6495 2.489722 GGAAGACACAGCCATTCCTTTC 59.510 50.000 0.00 0.00 38.53 2.62
5479 6496 1.813513 AGACACAGCCATTCCTTTCG 58.186 50.000 0.00 0.00 0.00 3.46
5480 6497 1.072331 AGACACAGCCATTCCTTTCGT 59.928 47.619 0.00 0.00 0.00 3.85
5481 6498 1.880027 GACACAGCCATTCCTTTCGTT 59.120 47.619 0.00 0.00 0.00 3.85
5482 6499 2.293399 GACACAGCCATTCCTTTCGTTT 59.707 45.455 0.00 0.00 0.00 3.60
5483 6500 2.293399 ACACAGCCATTCCTTTCGTTTC 59.707 45.455 0.00 0.00 0.00 2.78
5484 6501 2.293122 CACAGCCATTCCTTTCGTTTCA 59.707 45.455 0.00 0.00 0.00 2.69
5485 6502 2.955660 ACAGCCATTCCTTTCGTTTCAA 59.044 40.909 0.00 0.00 0.00 2.69
5486 6503 3.383185 ACAGCCATTCCTTTCGTTTCAAA 59.617 39.130 0.00 0.00 0.00 2.69
5487 6504 4.039124 ACAGCCATTCCTTTCGTTTCAAAT 59.961 37.500 0.00 0.00 0.00 2.32
5488 6505 4.990426 CAGCCATTCCTTTCGTTTCAAATT 59.010 37.500 0.00 0.00 0.00 1.82
5489 6506 4.990426 AGCCATTCCTTTCGTTTCAAATTG 59.010 37.500 0.00 0.00 0.00 2.32
5490 6507 4.749598 GCCATTCCTTTCGTTTCAAATTGT 59.250 37.500 0.00 0.00 0.00 2.71
5491 6508 5.107491 GCCATTCCTTTCGTTTCAAATTGTC 60.107 40.000 0.00 0.00 0.00 3.18
5492 6509 5.405269 CCATTCCTTTCGTTTCAAATTGTCC 59.595 40.000 0.00 0.00 0.00 4.02
5493 6510 5.584253 TTCCTTTCGTTTCAAATTGTCCA 57.416 34.783 0.00 0.00 0.00 4.02
5494 6511 5.584253 TCCTTTCGTTTCAAATTGTCCAA 57.416 34.783 0.00 0.00 0.00 3.53
5495 6512 5.344884 TCCTTTCGTTTCAAATTGTCCAAC 58.655 37.500 0.00 0.00 0.00 3.77
5496 6513 5.105716 TCCTTTCGTTTCAAATTGTCCAACA 60.106 36.000 0.00 0.00 0.00 3.33
5497 6514 5.005299 CCTTTCGTTTCAAATTGTCCAACAC 59.995 40.000 0.00 0.00 0.00 3.32
5498 6515 4.703645 TCGTTTCAAATTGTCCAACACA 57.296 36.364 0.00 0.00 0.00 3.72
5499 6516 4.416620 TCGTTTCAAATTGTCCAACACAC 58.583 39.130 0.00 0.00 33.41 3.82
5500 6517 4.082733 TCGTTTCAAATTGTCCAACACACA 60.083 37.500 0.00 0.00 33.41 3.72
5501 6518 4.623167 CGTTTCAAATTGTCCAACACACAA 59.377 37.500 0.00 0.00 38.12 3.33
5502 6519 5.220191 CGTTTCAAATTGTCCAACACACAAG 60.220 40.000 0.00 0.00 37.18 3.16
5503 6520 3.779759 TCAAATTGTCCAACACACAAGC 58.220 40.909 0.00 0.00 37.18 4.01
5504 6521 3.446873 TCAAATTGTCCAACACACAAGCT 59.553 39.130 0.00 0.00 37.18 3.74
5505 6522 4.081752 TCAAATTGTCCAACACACAAGCTT 60.082 37.500 0.00 0.00 37.18 3.74
5506 6523 4.470334 AATTGTCCAACACACAAGCTTT 57.530 36.364 0.00 0.00 37.18 3.51
5507 6524 2.937469 TGTCCAACACACAAGCTTTG 57.063 45.000 0.00 1.45 0.00 2.77
5508 6525 2.166829 TGTCCAACACACAAGCTTTGT 58.833 42.857 0.00 2.14 46.75 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 139 1.325355 GATGGGTGCAAGGATGATGG 58.675 55.000 0.00 0.00 0.00 3.51
143 155 2.102420 AGGTTGATTGCATGCATGGATG 59.898 45.455 27.34 21.79 0.00 3.51
201 214 2.035449 TGTATCGTACCACAGGCTATGC 59.965 50.000 0.00 0.00 0.00 3.14
219 232 0.108329 GCGTAGGAGGCTGCTTTGTA 60.108 55.000 15.51 0.00 0.00 2.41
220 233 1.376037 GCGTAGGAGGCTGCTTTGT 60.376 57.895 15.51 0.00 0.00 2.83
221 234 1.078848 AGCGTAGGAGGCTGCTTTG 60.079 57.895 15.51 8.36 38.00 2.77
222 235 3.393360 AGCGTAGGAGGCTGCTTT 58.607 55.556 15.51 0.00 38.00 3.51
293 306 4.803426 GTCTCGTGGAGCTGCCCG 62.803 72.222 3.20 3.20 34.97 6.13
407 424 4.380945 ACGGGCCCCATGCATGTT 62.381 61.111 24.58 0.00 43.89 2.71
809 845 5.266733 TGTACAACGAGTGGTTAAGAAGT 57.733 39.130 0.00 0.00 36.49 3.01
829 865 6.488817 GCAAAAGAAAATGCAACTGAAATGT 58.511 32.000 0.00 0.00 42.12 2.71
848 884 0.814457 ACACCAAGCTTCACGCAAAA 59.186 45.000 0.00 0.00 42.61 2.44
954 996 4.624117 CGGCCGCTCGATCGCTTA 62.624 66.667 14.67 0.00 0.00 3.09
987 1029 2.011046 GCCAGCATCTTCGCTTCTTCT 61.011 52.381 0.00 0.00 41.38 2.85
988 1030 0.376502 GCCAGCATCTTCGCTTCTTC 59.623 55.000 0.00 0.00 41.38 2.87
989 1031 0.321919 TGCCAGCATCTTCGCTTCTT 60.322 50.000 0.00 0.00 41.38 2.52
1120 1162 3.002038 AGGAAGCTAGTACTACTGCGT 57.998 47.619 0.00 0.21 30.98 5.24
1122 1164 4.205587 TGGTAGGAAGCTAGTACTACTGC 58.794 47.826 7.57 2.12 36.81 4.40
1124 1166 6.300703 CAGATGGTAGGAAGCTAGTACTACT 58.699 44.000 7.57 0.00 36.81 2.57
1126 1168 5.071370 GCAGATGGTAGGAAGCTAGTACTA 58.929 45.833 1.89 1.89 0.00 1.82
1133 1175 2.406559 AGATGCAGATGGTAGGAAGCT 58.593 47.619 0.00 0.00 0.00 3.74
1181 1226 0.589223 TGTTCGTTTGTTCGGATGCC 59.411 50.000 0.00 0.00 0.00 4.40
1188 1233 3.120786 CGGGATACTGTGTTCGTTTGTTC 60.121 47.826 0.00 0.00 38.54 3.18
1195 1240 1.100510 TCCTCGGGATACTGTGTTCG 58.899 55.000 0.00 0.00 45.94 3.95
1196 1241 2.758979 TCTTCCTCGGGATACTGTGTTC 59.241 50.000 0.00 0.00 45.94 3.18
1239 1289 2.288640 GCAGAAAAAGCAGAAGCCATGT 60.289 45.455 0.00 0.00 43.56 3.21
1273 1323 0.251209 TGGTACTCTCTGTGCTCGGT 60.251 55.000 0.00 0.00 0.00 4.69
1279 1329 3.999001 TGTAGTACGTGGTACTCTCTGTG 59.001 47.826 11.39 0.00 44.86 3.66
1379 1436 0.107410 TGTTGTGCTCCCTCGTGTTT 60.107 50.000 0.00 0.00 0.00 2.83
1406 1485 1.335964 CGCTGTGTGCTACTGTGTAGT 60.336 52.381 6.60 0.00 40.11 2.73
1407 1486 1.335964 ACGCTGTGTGCTACTGTGTAG 60.336 52.381 13.12 0.77 46.06 2.74
1408 1487 0.671796 ACGCTGTGTGCTACTGTGTA 59.328 50.000 13.12 0.00 46.06 2.90
1409 1488 1.441729 ACGCTGTGTGCTACTGTGT 59.558 52.632 10.33 10.33 44.07 3.72
1410 1489 0.508641 GAACGCTGTGTGCTACTGTG 59.491 55.000 0.00 9.36 42.40 3.66
1411 1490 0.600255 GGAACGCTGTGTGCTACTGT 60.600 55.000 0.00 0.00 40.11 3.55
1412 1491 0.599991 TGGAACGCTGTGTGCTACTG 60.600 55.000 0.00 0.00 40.11 2.74
1413 1492 0.319900 CTGGAACGCTGTGTGCTACT 60.320 55.000 0.00 0.00 40.11 2.57
1414 1493 0.600255 ACTGGAACGCTGTGTGCTAC 60.600 55.000 0.00 0.00 40.11 3.58
1415 1494 0.319555 GACTGGAACGCTGTGTGCTA 60.320 55.000 0.00 0.00 40.11 3.49
1416 1495 1.595382 GACTGGAACGCTGTGTGCT 60.595 57.895 0.00 0.00 40.11 4.40
1417 1496 0.319555 TAGACTGGAACGCTGTGTGC 60.320 55.000 0.00 0.00 38.57 4.57
1418 1497 1.000163 ACTAGACTGGAACGCTGTGTG 60.000 52.381 0.00 0.00 0.00 3.82
1426 1505 9.237846 CTTTTCATTTGAAAACTAGACTGGAAC 57.762 33.333 13.08 0.00 45.76 3.62
1483 1563 2.541346 GCACTGTCATCCATCATGTACG 59.459 50.000 0.00 0.00 33.66 3.67
1696 1788 2.059541 GAAAGAGGACGGACGAACAAG 58.940 52.381 0.00 0.00 0.00 3.16
1716 1808 0.961753 GCCACACCTTTCTTTGGAGG 59.038 55.000 0.00 0.00 39.02 4.30
1731 1823 0.179181 CATCATGTGTGCTTCGCCAC 60.179 55.000 0.00 0.00 36.28 5.01
1759 1851 2.381911 CATCCTGGAAAGACCCCATTG 58.618 52.381 0.00 0.00 38.00 2.82
1775 1868 1.740025 CCAAAGAGCGTCTTTCCATCC 59.260 52.381 9.20 0.00 42.60 3.51
1776 1869 1.131315 GCCAAAGAGCGTCTTTCCATC 59.869 52.381 9.20 0.00 42.60 3.51
1777 1870 1.168714 GCCAAAGAGCGTCTTTCCAT 58.831 50.000 9.20 0.00 42.60 3.41
1796 1889 4.600062 AGTAAAGCCCAGGGTTAAATCAG 58.400 43.478 7.55 0.00 35.18 2.90
1857 1957 7.224753 CAGCAACATTTGGAACTCGTACTATAT 59.775 37.037 0.00 0.00 0.00 0.86
1862 1962 3.810373 CAGCAACATTTGGAACTCGTAC 58.190 45.455 0.00 0.00 0.00 3.67
1935 2042 3.463329 AGCCCATGTAATGTAAGGACCAT 59.537 43.478 0.00 0.00 44.81 3.55
1942 2049 3.380471 AGCCAAGCCCATGTAATGTAA 57.620 42.857 0.00 0.00 44.81 2.41
1943 2050 4.397420 CATAGCCAAGCCCATGTAATGTA 58.603 43.478 0.00 0.00 44.81 2.29
1944 2051 3.225104 CATAGCCAAGCCCATGTAATGT 58.775 45.455 0.00 0.00 44.81 2.71
1945 2052 2.029649 GCATAGCCAAGCCCATGTAATG 60.030 50.000 0.00 0.00 46.21 1.90
1946 2053 2.158415 AGCATAGCCAAGCCCATGTAAT 60.158 45.455 0.00 0.00 0.00 1.89
1981 2104 0.768221 TGGTGCAGGGAGAAAGAGGT 60.768 55.000 0.00 0.00 0.00 3.85
2022 2151 7.411804 CGCAGAGTTTTTGTTTTTGAGACAAAT 60.412 33.333 3.59 0.00 43.96 2.32
2023 2152 6.128956 CGCAGAGTTTTTGTTTTTGAGACAAA 60.129 34.615 0.00 0.00 43.16 2.83
2024 2153 5.344665 CGCAGAGTTTTTGTTTTTGAGACAA 59.655 36.000 0.00 0.00 35.36 3.18
2025 2154 4.856487 CGCAGAGTTTTTGTTTTTGAGACA 59.144 37.500 0.00 0.00 0.00 3.41
2026 2155 4.857037 ACGCAGAGTTTTTGTTTTTGAGAC 59.143 37.500 0.00 0.00 0.00 3.36
2027 2156 5.054390 ACGCAGAGTTTTTGTTTTTGAGA 57.946 34.783 0.00 0.00 0.00 3.27
2028 2157 5.761818 AACGCAGAGTTTTTGTTTTTGAG 57.238 34.783 0.00 0.00 40.88 3.02
2029 2158 7.030165 TGATAACGCAGAGTTTTTGTTTTTGA 58.970 30.769 0.00 0.00 43.86 2.69
2030 2159 7.215696 TGATAACGCAGAGTTTTTGTTTTTG 57.784 32.000 0.00 0.00 43.86 2.44
2031 2160 7.042791 CCATGATAACGCAGAGTTTTTGTTTTT 60.043 33.333 0.00 0.00 43.86 1.94
2032 2161 6.420604 CCATGATAACGCAGAGTTTTTGTTTT 59.579 34.615 0.00 0.00 43.86 2.43
2033 2162 5.920273 CCATGATAACGCAGAGTTTTTGTTT 59.080 36.000 0.00 0.00 43.86 2.83
2034 2163 5.460646 CCATGATAACGCAGAGTTTTTGTT 58.539 37.500 0.00 0.00 43.86 2.83
2035 2164 4.615912 GCCATGATAACGCAGAGTTTTTGT 60.616 41.667 0.00 0.00 43.86 2.83
2036 2165 3.853671 GCCATGATAACGCAGAGTTTTTG 59.146 43.478 0.00 0.00 43.86 2.44
2037 2166 3.505680 TGCCATGATAACGCAGAGTTTTT 59.494 39.130 0.00 0.00 43.86 1.94
2038 2167 3.081061 TGCCATGATAACGCAGAGTTTT 58.919 40.909 0.00 0.00 43.86 2.43
2039 2168 2.420022 GTGCCATGATAACGCAGAGTTT 59.580 45.455 0.00 0.00 43.86 2.66
2040 2169 2.009774 GTGCCATGATAACGCAGAGTT 58.990 47.619 0.00 0.00 46.36 3.01
2041 2170 1.656652 GTGCCATGATAACGCAGAGT 58.343 50.000 0.00 0.00 32.08 3.24
2042 2171 0.578683 CGTGCCATGATAACGCAGAG 59.421 55.000 0.00 0.00 32.08 3.35
2043 2172 2.676744 CGTGCCATGATAACGCAGA 58.323 52.632 0.00 0.00 32.08 4.26
2047 2176 1.821241 CGAGGCGTGCCATGATAACG 61.821 60.000 14.29 9.53 40.22 3.18
2048 2177 0.529773 TCGAGGCGTGCCATGATAAC 60.530 55.000 14.29 0.00 38.92 1.89
2049 2178 0.249447 CTCGAGGCGTGCCATGATAA 60.249 55.000 14.29 0.00 38.92 1.75
2050 2179 1.363807 CTCGAGGCGTGCCATGATA 59.636 57.895 14.29 0.00 38.92 2.15
2051 2180 2.107750 CTCGAGGCGTGCCATGAT 59.892 61.111 14.29 0.00 38.92 2.45
2052 2181 3.381983 ACTCGAGGCGTGCCATGA 61.382 61.111 18.41 9.12 38.92 3.07
2053 2182 3.190849 CACTCGAGGCGTGCCATG 61.191 66.667 18.41 4.82 38.92 3.66
2079 2208 1.856265 GAAGCCAAGGTGCAAGGACG 61.856 60.000 0.00 0.00 0.00 4.79
2086 2215 2.598394 TGCAGGAAGCCAAGGTGC 60.598 61.111 0.00 0.00 44.83 5.01
2111 2245 7.920682 ACTTGTACTTTAACTGATTGCAAAAGG 59.079 33.333 1.71 0.00 32.67 3.11
2136 2270 0.941542 TGCCGTGTGTTGCTTAAGAC 59.058 50.000 6.67 0.00 0.00 3.01
2201 2335 4.688419 CACAAAGCCGCACCGCAG 62.688 66.667 0.00 0.00 0.00 5.18
2211 2345 1.993370 CGTACTACTCCAGCACAAAGC 59.007 52.381 0.00 0.00 46.19 3.51
2212 2346 1.993370 GCGTACTACTCCAGCACAAAG 59.007 52.381 0.00 0.00 0.00 2.77
2219 2353 1.630148 GCACTTGCGTACTACTCCAG 58.370 55.000 0.00 0.00 0.00 3.86
2393 2533 4.189231 ACAGCGGGTGTTTAATGATAGAC 58.811 43.478 7.07 0.00 34.94 2.59
2461 2604 2.546584 CGGGATCAAGCATCAAGATCGA 60.547 50.000 0.00 0.00 39.17 3.59
2480 2623 1.203758 GTGCCCTAATTTTGTTCCCGG 59.796 52.381 0.00 0.00 0.00 5.73
2530 2677 2.227036 CCAAGAGCCACAGGGAGGT 61.227 63.158 0.00 0.00 35.59 3.85
2604 2751 6.191657 TCATCATGGTATCACCTAAGCATT 57.808 37.500 0.00 0.00 39.58 3.56
2631 2778 5.005299 GCATTTATTTGTATGCCGTTCCAAC 59.995 40.000 0.00 0.00 34.23 3.77
2634 2781 4.677584 TGCATTTATTTGTATGCCGTTCC 58.322 39.130 0.00 0.00 39.12 3.62
2636 2783 5.356751 TCTCTGCATTTATTTGTATGCCGTT 59.643 36.000 0.00 0.00 39.12 4.44
2637 2784 4.881273 TCTCTGCATTTATTTGTATGCCGT 59.119 37.500 0.00 0.00 39.12 5.68
2638 2785 5.422666 TCTCTGCATTTATTTGTATGCCG 57.577 39.130 0.00 0.00 39.12 5.69
2639 2786 7.205297 ACAATCTCTGCATTTATTTGTATGCC 58.795 34.615 0.00 0.00 39.12 4.40
2641 2788 9.373750 CGTACAATCTCTGCATTTATTTGTATG 57.626 33.333 10.57 10.95 0.00 2.39
2643 2790 7.406553 GCGTACAATCTCTGCATTTATTTGTA 58.593 34.615 0.00 0.00 0.00 2.41
2644 2791 6.258160 GCGTACAATCTCTGCATTTATTTGT 58.742 36.000 0.00 0.00 0.00 2.83
2650 2835 2.939103 GAGGCGTACAATCTCTGCATTT 59.061 45.455 0.00 0.00 0.00 2.32
2653 2838 0.894835 TGAGGCGTACAATCTCTGCA 59.105 50.000 0.00 0.00 0.00 4.41
2654 2839 1.281899 GTGAGGCGTACAATCTCTGC 58.718 55.000 0.00 0.00 0.00 4.26
2656 2841 0.824759 GGGTGAGGCGTACAATCTCT 59.175 55.000 0.00 0.00 0.00 3.10
2660 2845 2.234913 GACGGGGTGAGGCGTACAAT 62.235 60.000 0.00 0.00 0.00 2.71
2668 2853 3.622060 ATTTGCCGACGGGGTGAGG 62.622 63.158 17.22 0.00 38.44 3.86
2672 2857 2.671619 CACATTTGCCGACGGGGT 60.672 61.111 17.22 0.00 38.44 4.95
2676 2861 0.442310 CACTACCACATTTGCCGACG 59.558 55.000 0.00 0.00 0.00 5.12
2677 2862 0.802494 CCACTACCACATTTGCCGAC 59.198 55.000 0.00 0.00 0.00 4.79
2678 2863 0.398696 ACCACTACCACATTTGCCGA 59.601 50.000 0.00 0.00 0.00 5.54
2706 2891 2.307980 TCCCCGAGAGAGAAGAGTACAA 59.692 50.000 0.00 0.00 0.00 2.41
2707 2892 1.914108 TCCCCGAGAGAGAAGAGTACA 59.086 52.381 0.00 0.00 0.00 2.90
2710 2895 3.894742 CTCCCCGAGAGAGAAGAGT 57.105 57.895 0.00 0.00 46.50 3.24
2719 2904 2.131776 GAGAAACTCTCTCCCCGAGA 57.868 55.000 0.00 0.00 46.32 4.04
2815 3038 5.867174 CCAAGTACATCAGTGTCACGAATAA 59.133 40.000 0.00 0.00 39.77 1.40
2899 3128 2.737376 GCGGACGAAAGGAACGCT 60.737 61.111 0.00 0.00 44.19 5.07
2916 3145 4.575885 TCGATTAGGACCCAACAAAAGAG 58.424 43.478 0.00 0.00 0.00 2.85
2956 3192 4.149046 CGACTGAGACTTAGCAAAACTGAC 59.851 45.833 0.00 0.00 0.00 3.51
2957 3193 4.037565 TCGACTGAGACTTAGCAAAACTGA 59.962 41.667 0.00 0.00 0.00 3.41
2958 3194 4.149046 GTCGACTGAGACTTAGCAAAACTG 59.851 45.833 8.70 0.00 38.09 3.16
2959 3195 4.299978 GTCGACTGAGACTTAGCAAAACT 58.700 43.478 8.70 0.00 38.09 2.66
2960 3196 4.632740 GTCGACTGAGACTTAGCAAAAC 57.367 45.455 8.70 0.00 38.09 2.43
2971 3207 1.613925 CAAAGTCCCAGTCGACTGAGA 59.386 52.381 40.21 32.55 46.59 3.27
2972 3208 1.341531 ACAAAGTCCCAGTCGACTGAG 59.658 52.381 40.21 30.85 46.59 3.35
2973 3209 1.410004 ACAAAGTCCCAGTCGACTGA 58.590 50.000 40.21 23.03 46.59 3.41
2974 3210 2.240493 AACAAAGTCCCAGTCGACTG 57.760 50.000 33.87 33.87 42.35 3.51
2975 3211 3.323979 ACATAACAAAGTCCCAGTCGACT 59.676 43.478 13.58 13.58 45.12 4.18
2976 3212 3.660865 ACATAACAAAGTCCCAGTCGAC 58.339 45.455 7.70 7.70 0.00 4.20
2977 3213 3.576982 AGACATAACAAAGTCCCAGTCGA 59.423 43.478 0.00 0.00 35.38 4.20
2978 3214 3.926616 AGACATAACAAAGTCCCAGTCG 58.073 45.455 0.00 0.00 35.38 4.18
2979 3215 4.894784 TGAGACATAACAAAGTCCCAGTC 58.105 43.478 0.00 0.00 35.38 3.51
2980 3216 4.348168 ACTGAGACATAACAAAGTCCCAGT 59.652 41.667 4.25 4.25 45.26 4.00
2981 3217 4.899502 ACTGAGACATAACAAAGTCCCAG 58.100 43.478 0.00 0.00 43.60 4.45
2982 3218 4.560716 CGACTGAGACATAACAAAGTCCCA 60.561 45.833 0.00 0.00 35.38 4.37
2983 3219 3.927142 CGACTGAGACATAACAAAGTCCC 59.073 47.826 0.00 0.00 35.38 4.46
2984 3220 4.806330 TCGACTGAGACATAACAAAGTCC 58.194 43.478 0.00 0.00 35.38 3.85
2985 3221 5.220303 GCATCGACTGAGACATAACAAAGTC 60.220 44.000 0.00 0.00 35.02 3.01
2986 3222 4.627467 GCATCGACTGAGACATAACAAAGT 59.373 41.667 0.00 0.00 0.00 2.66
2987 3223 4.867047 AGCATCGACTGAGACATAACAAAG 59.133 41.667 0.00 0.00 0.00 2.77
2988 3224 4.820897 AGCATCGACTGAGACATAACAAA 58.179 39.130 0.00 0.00 0.00 2.83
2989 3225 4.456280 AGCATCGACTGAGACATAACAA 57.544 40.909 0.00 0.00 0.00 2.83
2990 3226 5.774498 ATAGCATCGACTGAGACATAACA 57.226 39.130 0.00 0.00 0.00 2.41
2991 3227 8.749841 AATTATAGCATCGACTGAGACATAAC 57.250 34.615 0.00 0.00 0.00 1.89
2995 3231 9.841880 GTATTAATTATAGCATCGACTGAGACA 57.158 33.333 0.00 0.00 0.00 3.41
2996 3232 9.001049 CGTATTAATTATAGCATCGACTGAGAC 57.999 37.037 0.00 0.00 0.00 3.36
2997 3233 8.727910 ACGTATTAATTATAGCATCGACTGAGA 58.272 33.333 0.00 0.00 0.00 3.27
2998 3234 8.897457 ACGTATTAATTATAGCATCGACTGAG 57.103 34.615 0.00 0.00 0.00 3.35
2999 3235 9.338291 GAACGTATTAATTATAGCATCGACTGA 57.662 33.333 0.00 0.00 0.00 3.41
3000 3236 8.584600 GGAACGTATTAATTATAGCATCGACTG 58.415 37.037 0.00 0.00 0.00 3.51
3001 3237 7.758528 GGGAACGTATTAATTATAGCATCGACT 59.241 37.037 0.00 0.00 0.00 4.18
3002 3238 7.758528 AGGGAACGTATTAATTATAGCATCGAC 59.241 37.037 0.00 0.00 0.00 4.20
3003 3239 7.833786 AGGGAACGTATTAATTATAGCATCGA 58.166 34.615 0.00 0.00 0.00 3.59
3004 3240 8.475331 AAGGGAACGTATTAATTATAGCATCG 57.525 34.615 0.00 0.00 0.00 3.84
3005 3241 8.592998 CGAAGGGAACGTATTAATTATAGCATC 58.407 37.037 0.00 0.00 0.00 3.91
3006 3242 7.064253 GCGAAGGGAACGTATTAATTATAGCAT 59.936 37.037 0.00 0.00 0.00 3.79
3007 3243 6.366877 GCGAAGGGAACGTATTAATTATAGCA 59.633 38.462 0.00 0.00 0.00 3.49
3008 3244 6.589139 AGCGAAGGGAACGTATTAATTATAGC 59.411 38.462 0.00 0.00 0.00 2.97
3009 3245 9.286946 CTAGCGAAGGGAACGTATTAATTATAG 57.713 37.037 0.00 0.00 0.00 1.31
3010 3246 8.796475 ACTAGCGAAGGGAACGTATTAATTATA 58.204 33.333 0.00 0.00 0.00 0.98
3011 3247 7.664758 ACTAGCGAAGGGAACGTATTAATTAT 58.335 34.615 0.00 0.00 0.00 1.28
3047 3288 5.890110 ATTGTGACTCGAATTATAGTGCG 57.110 39.130 0.00 0.00 0.00 5.34
3048 3289 7.234187 TCAATTGTGACTCGAATTATAGTGC 57.766 36.000 5.13 0.00 0.00 4.40
3218 3470 2.597510 AAGCGGTTGCCCCTGAAC 60.598 61.111 0.00 0.00 44.31 3.18
3307 3559 1.138247 GTGTAGGTGTACGCCTCGG 59.862 63.158 30.82 0.00 39.94 4.63
3319 3571 1.069703 TCGACGTTGTTCTCGTGTAGG 60.070 52.381 1.96 0.00 41.64 3.18
3356 3608 2.953821 GGCATGTCCCACGTTGTG 59.046 61.111 0.00 0.00 0.00 3.33
3581 3842 0.169009 GCACAAACCTGAAGCGGATC 59.831 55.000 0.00 0.00 0.00 3.36
3632 3893 5.291905 TCATCATCACTCGGTCTCTACTA 57.708 43.478 0.00 0.00 0.00 1.82
3642 3903 5.287226 TCATCAGTTCATCATCATCACTCG 58.713 41.667 0.00 0.00 0.00 4.18
3650 3911 5.556355 TGTTGCTTCATCAGTTCATCATC 57.444 39.130 0.00 0.00 0.00 2.92
3843 4104 2.036733 AGAGAACGACGTGGAATTGGAA 59.963 45.455 3.97 0.00 0.00 3.53
3845 4106 1.993370 GAGAGAACGACGTGGAATTGG 59.007 52.381 3.97 0.00 0.00 3.16
3846 4107 2.672714 TGAGAGAACGACGTGGAATTG 58.327 47.619 3.97 0.00 0.00 2.32
3848 4109 3.594603 AATGAGAGAACGACGTGGAAT 57.405 42.857 3.97 0.00 0.00 3.01
3860 4121 2.234661 AGCACACGGATGAAATGAGAGA 59.765 45.455 0.00 0.00 0.00 3.10
3866 4127 1.935873 CGATCAGCACACGGATGAAAT 59.064 47.619 0.00 0.00 46.46 2.17
3886 4147 1.314730 AACCCACGGTGTCAAATGAC 58.685 50.000 7.45 6.60 44.97 3.06
3895 4156 2.721231 CAGTGCAAACCCACGGTG 59.279 61.111 0.00 0.00 40.59 4.94
3910 4171 2.676632 ATGACTCTCTCTGCTTGCAG 57.323 50.000 15.74 15.74 0.00 4.41
3943 4204 3.213402 CTCTCCCTCGTCGAGCCC 61.213 72.222 17.02 0.00 0.00 5.19
4349 4619 1.300388 CAGCAACAGCAAAGGTGGC 60.300 57.895 1.09 0.00 35.13 5.01
4366 4639 2.880879 GTGAGCGCGCGAGATTCA 60.881 61.111 37.18 25.65 0.00 2.57
4390 4663 1.065273 CCATCGGTCGGTTAGTCGG 59.935 63.158 0.00 0.00 0.00 4.79
4518 4796 0.321671 TAGCTGCTTCAGTGGTGTCC 59.678 55.000 7.79 0.00 33.43 4.02
4524 4802 1.502231 ACGTGTTAGCTGCTTCAGTG 58.498 50.000 7.79 6.36 33.43 3.66
4525 4803 2.673833 GTACGTGTTAGCTGCTTCAGT 58.326 47.619 7.79 10.12 33.43 3.41
4526 4804 1.649171 CGTACGTGTTAGCTGCTTCAG 59.351 52.381 7.79 5.25 34.12 3.02
4527 4805 1.001048 ACGTACGTGTTAGCTGCTTCA 60.001 47.619 22.14 5.26 0.00 3.02
4528 4806 1.694639 ACGTACGTGTTAGCTGCTTC 58.305 50.000 22.14 2.35 0.00 3.86
4530 4808 1.464687 CGTACGTACGTGTTAGCTGCT 60.465 52.381 33.95 7.57 44.13 4.24
4531 4809 0.903187 CGTACGTACGTGTTAGCTGC 59.097 55.000 33.95 4.50 44.13 5.25
4568 4854 2.885894 CTCTAACCTACGAGTCCCATCC 59.114 54.545 0.00 0.00 0.00 3.51
4570 4856 3.053842 TCACTCTAACCTACGAGTCCCAT 60.054 47.826 0.00 0.00 38.37 4.00
4571 4857 2.306805 TCACTCTAACCTACGAGTCCCA 59.693 50.000 0.00 0.00 38.37 4.37
4641 4932 0.807667 CCGCCTCTCAAGACGAATGG 60.808 60.000 0.00 0.00 0.00 3.16
4733 5027 3.262151 TCAGGAACATACAAACCGATCCA 59.738 43.478 0.00 0.00 0.00 3.41
4748 5042 3.627577 ACACATTCACACTGTTCAGGAAC 59.372 43.478 5.23 5.23 41.50 3.62
4751 5045 3.205338 TCACACATTCACACTGTTCAGG 58.795 45.455 4.82 0.00 0.00 3.86
4759 5053 4.597079 ACAAACGAATCACACATTCACAC 58.403 39.130 0.00 0.00 0.00 3.82
4760 5054 4.891627 ACAAACGAATCACACATTCACA 57.108 36.364 0.00 0.00 0.00 3.58
4761 5055 5.971202 AGAAACAAACGAATCACACATTCAC 59.029 36.000 0.00 0.00 0.00 3.18
4762 5056 6.130298 AGAAACAAACGAATCACACATTCA 57.870 33.333 0.00 0.00 0.00 2.57
4763 5057 7.009174 ACAAAGAAACAAACGAATCACACATTC 59.991 33.333 0.00 0.00 0.00 2.67
4764 5058 6.811170 ACAAAGAAACAAACGAATCACACATT 59.189 30.769 0.00 0.00 0.00 2.71
4765 5059 6.329496 ACAAAGAAACAAACGAATCACACAT 58.671 32.000 0.00 0.00 0.00 3.21
4766 5060 5.704888 ACAAAGAAACAAACGAATCACACA 58.295 33.333 0.00 0.00 0.00 3.72
4787 5085 7.101652 TCACACAAAGCAGGTAAAATAAACA 57.898 32.000 0.00 0.00 0.00 2.83
4788 5086 7.995463 TTCACACAAAGCAGGTAAAATAAAC 57.005 32.000 0.00 0.00 0.00 2.01
4842 5140 4.440758 TGTTTCTTACCGTTACGAAGTTCG 59.559 41.667 23.24 23.24 37.78 3.95
4850 5148 2.769893 TGCCCTGTTTCTTACCGTTAC 58.230 47.619 0.00 0.00 0.00 2.50
4851 5149 3.488778 TTGCCCTGTTTCTTACCGTTA 57.511 42.857 0.00 0.00 0.00 3.18
4868 5166 9.855021 AACTTACCAATCTATACATTTGTTTGC 57.145 29.630 0.00 0.00 0.00 3.68
4893 5191 3.465871 GCACAATTTCCTTTTCAGGCAA 58.534 40.909 0.00 0.00 40.58 4.52
4894 5192 2.224257 GGCACAATTTCCTTTTCAGGCA 60.224 45.455 0.00 0.00 40.58 4.75
4895 5193 2.224257 TGGCACAATTTCCTTTTCAGGC 60.224 45.455 0.00 0.00 35.89 4.85
4896 5194 3.555586 CCTGGCACAATTTCCTTTTCAGG 60.556 47.826 0.00 0.00 39.10 3.86
4897 5195 3.555586 CCCTGGCACAATTTCCTTTTCAG 60.556 47.826 0.00 0.00 38.70 3.02
4898 5196 2.368221 CCCTGGCACAATTTCCTTTTCA 59.632 45.455 0.00 0.00 38.70 2.69
4899 5197 2.632512 TCCCTGGCACAATTTCCTTTTC 59.367 45.455 0.00 0.00 38.70 2.29
4900 5198 2.368548 GTCCCTGGCACAATTTCCTTTT 59.631 45.455 0.00 0.00 38.70 2.27
4902 5200 1.133199 TGTCCCTGGCACAATTTCCTT 60.133 47.619 0.00 0.00 38.70 3.36
4903 5201 0.482446 TGTCCCTGGCACAATTTCCT 59.518 50.000 0.00 0.00 38.70 3.36
4904 5202 1.478105 GATGTCCCTGGCACAATTTCC 59.522 52.381 0.00 0.00 38.70 3.13
4905 5203 1.133025 CGATGTCCCTGGCACAATTTC 59.867 52.381 0.00 0.00 38.70 2.17
4906 5204 1.176527 CGATGTCCCTGGCACAATTT 58.823 50.000 0.00 0.00 38.70 1.82
4907 5205 0.327924 TCGATGTCCCTGGCACAATT 59.672 50.000 0.00 0.00 38.70 2.32
4909 5207 1.296392 CTCGATGTCCCTGGCACAA 59.704 57.895 0.00 0.00 38.70 3.33
4914 5589 2.761208 ACTAGAAACTCGATGTCCCTGG 59.239 50.000 0.00 0.00 0.00 4.45
4917 5592 3.858238 CGAAACTAGAAACTCGATGTCCC 59.142 47.826 0.00 0.00 33.13 4.46
4924 5599 4.974275 TGTGAGTTCGAAACTAGAAACTCG 59.026 41.667 0.00 0.00 43.03 4.18
4936 5611 1.371267 CGGAGCGTGTGAGTTCGAA 60.371 57.895 0.00 0.00 0.00 3.71
4941 5616 3.991051 CACCCGGAGCGTGTGAGT 61.991 66.667 0.73 0.00 37.41 3.41
4948 5623 4.758251 TCACATGCACCCGGAGCG 62.758 66.667 0.73 0.00 33.85 5.03
4968 5978 4.098960 ACGAAAGTGTGTTCCTAGTCTCAA 59.901 41.667 0.00 0.00 46.97 3.02
4969 5979 3.635373 ACGAAAGTGTGTTCCTAGTCTCA 59.365 43.478 0.00 0.00 46.97 3.27
4990 6007 0.034960 GGGAGAAGGAAGGGCTCAAC 60.035 60.000 0.00 0.00 0.00 3.18
4998 6015 1.274712 AGTGCAGAGGGAGAAGGAAG 58.725 55.000 0.00 0.00 0.00 3.46
5014 6031 4.351874 TGGTTGGAGTAGGAAGAAAGTG 57.648 45.455 0.00 0.00 0.00 3.16
5015 6032 4.846940 AGATGGTTGGAGTAGGAAGAAAGT 59.153 41.667 0.00 0.00 0.00 2.66
5036 6053 4.495422 GAGGCGAGTGTCTAATGAAAAGA 58.505 43.478 0.00 0.00 0.00 2.52
5038 6055 3.596214 GGAGGCGAGTGTCTAATGAAAA 58.404 45.455 0.00 0.00 0.00 2.29
5039 6056 2.093658 GGGAGGCGAGTGTCTAATGAAA 60.094 50.000 0.00 0.00 0.00 2.69
5048 6065 0.544595 AAAGGTAGGGAGGCGAGTGT 60.545 55.000 0.00 0.00 0.00 3.55
5055 6072 1.966845 TTGGAGGAAAGGTAGGGAGG 58.033 55.000 0.00 0.00 0.00 4.30
5063 6080 0.811281 GACCGCAATTGGAGGAAAGG 59.189 55.000 7.72 0.00 39.08 3.11
5067 6084 2.435938 GCGACCGCAATTGGAGGA 60.436 61.111 9.73 0.00 39.08 3.71
5081 6098 2.545113 GCTCGGATTAGGTAATGTGCGA 60.545 50.000 0.00 0.00 33.52 5.10
5082 6099 1.792949 GCTCGGATTAGGTAATGTGCG 59.207 52.381 0.00 0.00 0.00 5.34
5087 6104 1.045407 TGCCGCTCGGATTAGGTAAT 58.955 50.000 13.11 0.00 37.50 1.89
5106 6123 4.334203 GGGGTTTGCTTTTCGTTTTTGATT 59.666 37.500 0.00 0.00 0.00 2.57
5112 6129 1.411246 GAGGGGGTTTGCTTTTCGTTT 59.589 47.619 0.00 0.00 0.00 3.60
5113 6130 1.037493 GAGGGGGTTTGCTTTTCGTT 58.963 50.000 0.00 0.00 0.00 3.85
5158 6175 0.107703 CGGGATCAAGCACTAGCCAA 60.108 55.000 0.00 0.00 43.56 4.52
5188 6205 0.844221 AAGGAGGAAAGCTCTGCCCT 60.844 55.000 0.00 0.00 0.00 5.19
5193 6210 4.263287 GGAGAAGAAAAGGAGGAAAGCTCT 60.263 45.833 0.00 0.00 0.00 4.09
5245 6262 8.780249 CATGCTTCCATTTTGAAGAAGAAAAAT 58.220 29.630 5.03 0.00 43.60 1.82
5252 6269 4.813027 GCTCATGCTTCCATTTTGAAGAA 58.187 39.130 5.03 0.00 43.60 2.52
5253 6270 4.445452 GCTCATGCTTCCATTTTGAAGA 57.555 40.909 5.03 0.00 43.60 2.87
5267 6284 4.768130 ATAGATGATGCAAAGCTCATGC 57.232 40.909 15.53 15.53 44.08 4.06
5299 6316 5.246307 GCCTGTAACACCAACTCTATTCTT 58.754 41.667 0.00 0.00 0.00 2.52
5301 6318 3.617263 CGCCTGTAACACCAACTCTATTC 59.383 47.826 0.00 0.00 0.00 1.75
5311 6328 2.033194 GCTGGTCGCCTGTAACACC 61.033 63.158 5.08 0.00 0.00 4.16
5334 6351 7.557358 TGCCTTGAGAGCAATCATTTTATCTTA 59.443 33.333 0.00 0.00 37.28 2.10
5349 6366 2.620585 GGGTCAATAATGCCTTGAGAGC 59.379 50.000 0.00 0.00 33.49 4.09
5355 6372 5.025453 ACAAATCAGGGTCAATAATGCCTT 58.975 37.500 0.00 0.00 0.00 4.35
5372 6389 0.030638 ACTGCGTGTGCCAACAAATC 59.969 50.000 0.00 0.00 41.78 2.17
5377 6394 2.105960 GAGTCACTGCGTGTGCCAAC 62.106 60.000 8.22 1.57 45.81 3.77
5384 6401 0.882042 AGGCTTTGAGTCACTGCGTG 60.882 55.000 9.91 2.79 34.45 5.34
5388 6405 1.071385 AGGACAGGCTTTGAGTCACTG 59.929 52.381 6.87 6.87 34.04 3.66
5389 6406 1.346068 GAGGACAGGCTTTGAGTCACT 59.654 52.381 0.00 0.69 34.04 3.41
5390 6407 1.802069 GAGGACAGGCTTTGAGTCAC 58.198 55.000 0.00 0.00 34.04 3.67
5391 6408 0.318441 CGAGGACAGGCTTTGAGTCA 59.682 55.000 5.25 0.00 34.04 3.41
5392 6409 0.318762 ACGAGGACAGGCTTTGAGTC 59.681 55.000 0.00 0.00 0.00 3.36
5393 6410 0.759346 AACGAGGACAGGCTTTGAGT 59.241 50.000 0.00 0.00 0.00 3.41
5394 6411 1.001406 AGAACGAGGACAGGCTTTGAG 59.999 52.381 0.00 0.00 0.00 3.02
5395 6412 1.048601 AGAACGAGGACAGGCTTTGA 58.951 50.000 0.00 0.00 0.00 2.69
5396 6413 1.884235 AAGAACGAGGACAGGCTTTG 58.116 50.000 0.00 0.00 0.00 2.77
5397 6414 2.640316 AAAGAACGAGGACAGGCTTT 57.360 45.000 0.00 0.00 0.00 3.51
5398 6415 3.983044 ATAAAGAACGAGGACAGGCTT 57.017 42.857 0.00 0.00 0.00 4.35
5399 6416 4.024670 ACTATAAAGAACGAGGACAGGCT 58.975 43.478 0.00 0.00 0.00 4.58
5400 6417 4.113354 CACTATAAAGAACGAGGACAGGC 58.887 47.826 0.00 0.00 0.00 4.85
5401 6418 5.326200 ACACTATAAAGAACGAGGACAGG 57.674 43.478 0.00 0.00 0.00 4.00
5402 6419 6.387465 TCAACACTATAAAGAACGAGGACAG 58.613 40.000 0.00 0.00 0.00 3.51
5403 6420 6.335471 TCAACACTATAAAGAACGAGGACA 57.665 37.500 0.00 0.00 0.00 4.02
5404 6421 5.288952 GCTCAACACTATAAAGAACGAGGAC 59.711 44.000 0.00 0.00 0.00 3.85
5405 6422 5.047590 TGCTCAACACTATAAAGAACGAGGA 60.048 40.000 0.00 0.00 0.00 3.71
5406 6423 5.168569 TGCTCAACACTATAAAGAACGAGG 58.831 41.667 0.00 0.00 0.00 4.63
5407 6424 6.706055 TTGCTCAACACTATAAAGAACGAG 57.294 37.500 0.00 0.00 0.00 4.18
5408 6425 7.485418 TTTTGCTCAACACTATAAAGAACGA 57.515 32.000 0.00 0.00 0.00 3.85
5409 6426 9.478019 CTATTTTGCTCAACACTATAAAGAACG 57.522 33.333 0.00 0.00 0.00 3.95
5410 6427 9.774742 CCTATTTTGCTCAACACTATAAAGAAC 57.225 33.333 0.00 0.00 0.00 3.01
5411 6428 9.515226 ACCTATTTTGCTCAACACTATAAAGAA 57.485 29.630 0.00 0.00 0.00 2.52
5412 6429 8.946085 CACCTATTTTGCTCAACACTATAAAGA 58.054 33.333 0.00 0.00 0.00 2.52
5413 6430 8.184192 CCACCTATTTTGCTCAACACTATAAAG 58.816 37.037 0.00 0.00 0.00 1.85
5414 6431 7.885922 TCCACCTATTTTGCTCAACACTATAAA 59.114 33.333 0.00 0.00 0.00 1.40
5415 6432 7.398829 TCCACCTATTTTGCTCAACACTATAA 58.601 34.615 0.00 0.00 0.00 0.98
5416 6433 6.953101 TCCACCTATTTTGCTCAACACTATA 58.047 36.000 0.00 0.00 0.00 1.31
5417 6434 5.815581 TCCACCTATTTTGCTCAACACTAT 58.184 37.500 0.00 0.00 0.00 2.12
5418 6435 5.235850 TCCACCTATTTTGCTCAACACTA 57.764 39.130 0.00 0.00 0.00 2.74
5419 6436 4.074970 CTCCACCTATTTTGCTCAACACT 58.925 43.478 0.00 0.00 0.00 3.55
5420 6437 3.191371 CCTCCACCTATTTTGCTCAACAC 59.809 47.826 0.00 0.00 0.00 3.32
5421 6438 3.420893 CCTCCACCTATTTTGCTCAACA 58.579 45.455 0.00 0.00 0.00 3.33
5422 6439 2.755103 CCCTCCACCTATTTTGCTCAAC 59.245 50.000 0.00 0.00 0.00 3.18
5423 6440 2.291540 CCCCTCCACCTATTTTGCTCAA 60.292 50.000 0.00 0.00 0.00 3.02
5424 6441 1.284785 CCCCTCCACCTATTTTGCTCA 59.715 52.381 0.00 0.00 0.00 4.26
5425 6442 1.410224 CCCCCTCCACCTATTTTGCTC 60.410 57.143 0.00 0.00 0.00 4.26
5426 6443 0.631212 CCCCCTCCACCTATTTTGCT 59.369 55.000 0.00 0.00 0.00 3.91
5427 6444 3.207452 CCCCCTCCACCTATTTTGC 57.793 57.895 0.00 0.00 0.00 3.68
5442 6459 2.804828 CTTCCGTCACAAGAGCCCCC 62.805 65.000 0.00 0.00 0.00 5.40
5443 6460 1.376037 CTTCCGTCACAAGAGCCCC 60.376 63.158 0.00 0.00 0.00 5.80
5444 6461 0.670854 GTCTTCCGTCACAAGAGCCC 60.671 60.000 0.00 0.00 30.32 5.19
5445 6462 0.033504 TGTCTTCCGTCACAAGAGCC 59.966 55.000 0.00 0.00 30.32 4.70
5446 6463 1.140816 GTGTCTTCCGTCACAAGAGC 58.859 55.000 0.00 0.00 35.04 4.09
5447 6464 2.398498 CTGTGTCTTCCGTCACAAGAG 58.602 52.381 0.00 0.00 42.67 2.85
5448 6465 1.538204 GCTGTGTCTTCCGTCACAAGA 60.538 52.381 0.00 0.00 42.67 3.02
5449 6466 0.861837 GCTGTGTCTTCCGTCACAAG 59.138 55.000 0.00 0.00 42.67 3.16
5450 6467 0.531974 GGCTGTGTCTTCCGTCACAA 60.532 55.000 0.00 0.00 42.67 3.33
5451 6468 1.069090 GGCTGTGTCTTCCGTCACA 59.931 57.895 0.00 0.00 41.37 3.58
5452 6469 0.320771 ATGGCTGTGTCTTCCGTCAC 60.321 55.000 0.00 0.00 35.43 3.67
5453 6470 0.396435 AATGGCTGTGTCTTCCGTCA 59.604 50.000 0.00 0.00 0.00 4.35
5454 6471 1.079503 GAATGGCTGTGTCTTCCGTC 58.920 55.000 0.00 0.00 0.00 4.79
5455 6472 0.321653 GGAATGGCTGTGTCTTCCGT 60.322 55.000 0.00 0.00 0.00 4.69
5456 6473 0.036010 AGGAATGGCTGTGTCTTCCG 60.036 55.000 0.00 0.00 41.64 4.30
5457 6474 2.206576 AAGGAATGGCTGTGTCTTCC 57.793 50.000 0.00 0.00 37.92 3.46
5458 6475 2.160417 CGAAAGGAATGGCTGTGTCTTC 59.840 50.000 0.00 0.00 0.00 2.87
5459 6476 2.154462 CGAAAGGAATGGCTGTGTCTT 58.846 47.619 0.00 0.00 0.00 3.01
5460 6477 1.072331 ACGAAAGGAATGGCTGTGTCT 59.928 47.619 0.00 0.00 0.00 3.41
5461 6478 1.523758 ACGAAAGGAATGGCTGTGTC 58.476 50.000 0.00 0.00 0.00 3.67
5462 6479 1.981256 AACGAAAGGAATGGCTGTGT 58.019 45.000 0.00 0.00 0.00 3.72
5463 6480 2.293122 TGAAACGAAAGGAATGGCTGTG 59.707 45.455 0.00 0.00 0.00 3.66
5464 6481 2.582052 TGAAACGAAAGGAATGGCTGT 58.418 42.857 0.00 0.00 0.00 4.40
5465 6482 3.641437 TTGAAACGAAAGGAATGGCTG 57.359 42.857 0.00 0.00 0.00 4.85
5466 6483 4.871933 ATTTGAAACGAAAGGAATGGCT 57.128 36.364 0.00 0.00 0.00 4.75
5467 6484 4.749598 ACAATTTGAAACGAAAGGAATGGC 59.250 37.500 2.79 0.00 0.00 4.40
5468 6485 5.405269 GGACAATTTGAAACGAAAGGAATGG 59.595 40.000 2.79 0.00 0.00 3.16
5469 6486 5.982516 TGGACAATTTGAAACGAAAGGAATG 59.017 36.000 2.79 0.00 0.00 2.67
5470 6487 6.155475 TGGACAATTTGAAACGAAAGGAAT 57.845 33.333 2.79 0.00 0.00 3.01
5471 6488 5.584253 TGGACAATTTGAAACGAAAGGAA 57.416 34.783 2.79 0.00 0.00 3.36
5472 6489 5.105716 TGTTGGACAATTTGAAACGAAAGGA 60.106 36.000 2.79 0.00 0.00 3.36
5473 6490 5.005299 GTGTTGGACAATTTGAAACGAAAGG 59.995 40.000 2.79 0.00 0.00 3.11
5474 6491 5.574830 TGTGTTGGACAATTTGAAACGAAAG 59.425 36.000 2.79 0.00 0.00 2.62
5475 6492 5.346281 GTGTGTTGGACAATTTGAAACGAAA 59.654 36.000 2.79 0.00 35.91 3.46
5476 6493 4.859798 GTGTGTTGGACAATTTGAAACGAA 59.140 37.500 2.79 0.00 35.91 3.85
5477 6494 4.082733 TGTGTGTTGGACAATTTGAAACGA 60.083 37.500 2.79 0.00 35.91 3.85
5478 6495 4.169508 TGTGTGTTGGACAATTTGAAACG 58.830 39.130 2.79 0.00 35.91 3.60
5479 6496 5.445806 GCTTGTGTGTTGGACAATTTGAAAC 60.446 40.000 2.79 5.60 35.91 2.78
5480 6497 4.629200 GCTTGTGTGTTGGACAATTTGAAA 59.371 37.500 2.79 0.00 35.91 2.69
5481 6498 4.081752 AGCTTGTGTGTTGGACAATTTGAA 60.082 37.500 2.79 0.00 35.91 2.69
5482 6499 3.446873 AGCTTGTGTGTTGGACAATTTGA 59.553 39.130 2.79 0.00 35.91 2.69
5483 6500 3.784338 AGCTTGTGTGTTGGACAATTTG 58.216 40.909 0.00 0.00 35.91 2.32
5484 6501 4.470334 AAGCTTGTGTGTTGGACAATTT 57.530 36.364 0.00 0.00 35.91 1.82
5485 6502 4.183101 CAAAGCTTGTGTGTTGGACAATT 58.817 39.130 0.00 0.00 35.91 2.32
5486 6503 3.195396 ACAAAGCTTGTGTGTTGGACAAT 59.805 39.130 0.00 0.00 43.48 2.71
5487 6504 2.560542 ACAAAGCTTGTGTGTTGGACAA 59.439 40.909 0.00 0.00 43.48 3.18
5488 6505 2.166829 ACAAAGCTTGTGTGTTGGACA 58.833 42.857 0.00 0.00 43.48 4.02
5489 6506 2.939460 ACAAAGCTTGTGTGTTGGAC 57.061 45.000 0.00 0.00 43.48 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.