Multiple sequence alignment - TraesCS6D01G242300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G242300 chr6D 100.000 2833 0 0 1 2833 344331740 344334572 0.000000e+00 5232
1 TraesCS6D01G242300 chr6D 78.311 438 64 23 1 415 313155158 313154729 1.300000e-63 254
2 TraesCS6D01G242300 chr6B 91.764 1627 93 18 1195 2784 520086280 520087902 0.000000e+00 2224
3 TraesCS6D01G242300 chr6B 87.463 670 42 16 547 1179 520085636 520086300 0.000000e+00 734
4 TraesCS6D01G242300 chr6A 91.080 1592 66 32 1268 2833 484857753 484859294 0.000000e+00 2084
5 TraesCS6D01G242300 chr6A 87.309 654 39 22 549 1179 484857115 484857747 0.000000e+00 708
6 TraesCS6D01G242300 chr7D 79.587 436 58 21 1 415 480012845 480012420 1.660000e-72 283
7 TraesCS6D01G242300 chr7D 79.673 428 54 13 1 403 365831465 365831046 7.730000e-71 278
8 TraesCS6D01G242300 chr7D 77.925 453 57 29 4 421 511690274 511689830 2.820000e-60 243
9 TraesCS6D01G242300 chr2A 78.419 468 55 24 1 441 574959942 574960390 2.160000e-66 263
10 TraesCS6D01G242300 chr4B 78.208 413 64 11 3 404 40214268 40214665 1.010000e-59 241
11 TraesCS6D01G242300 chr3A 91.083 157 14 0 5 161 27738150 27738306 2.210000e-51 213
12 TraesCS6D01G242300 chr5D 90.062 161 16 0 1 161 472315437 472315277 2.860000e-50 209
13 TraesCS6D01G242300 chr7B 89.441 161 17 0 1 161 320258136 320258296 1.330000e-48 204
14 TraesCS6D01G242300 chr7B 78.616 159 26 5 247 400 645518030 645518185 6.460000e-17 99


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G242300 chr6D 344331740 344334572 2832 False 5232 5232 100.0000 1 2833 1 chr6D.!!$F1 2832
1 TraesCS6D01G242300 chr6B 520085636 520087902 2266 False 1479 2224 89.6135 547 2784 2 chr6B.!!$F1 2237
2 TraesCS6D01G242300 chr6A 484857115 484859294 2179 False 1396 2084 89.1945 549 2833 2 chr6A.!!$F1 2284

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 165 0.027194 CAAGAATGATCGTGCAGCGG 59.973 55.0 8.46 0.0 41.72 5.52 F
418 419 0.028902 CTATCGACGCGATGTGTGGA 59.971 55.0 15.93 0.0 46.43 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1600 1676 0.323725 CAACACAAGGGAGGGGATGG 60.324 60.000 0.0 0.0 0.00 3.51 R
2361 2450 1.345415 GGTGGGAACAAGACCTACGAA 59.655 52.381 0.0 0.0 46.06 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.622064 ACGGACAAGAAGCTCAAACT 57.378 45.000 0.00 0.00 0.00 2.66
20 21 2.484889 ACGGACAAGAAGCTCAAACTC 58.515 47.619 0.00 0.00 0.00 3.01
21 22 1.457303 CGGACAAGAAGCTCAAACTCG 59.543 52.381 0.00 0.00 0.00 4.18
22 23 2.755650 GGACAAGAAGCTCAAACTCGA 58.244 47.619 0.00 0.00 0.00 4.04
23 24 3.131396 GGACAAGAAGCTCAAACTCGAA 58.869 45.455 0.00 0.00 0.00 3.71
24 25 3.185391 GGACAAGAAGCTCAAACTCGAAG 59.815 47.826 0.00 0.00 0.00 3.79
25 26 4.051922 GACAAGAAGCTCAAACTCGAAGA 58.948 43.478 0.00 0.00 0.00 2.87
39 40 3.087370 TCGAAGAGAGGAGAACCATGA 57.913 47.619 0.00 0.00 38.94 3.07
40 41 3.636679 TCGAAGAGAGGAGAACCATGAT 58.363 45.455 0.00 0.00 38.94 2.45
41 42 3.634448 TCGAAGAGAGGAGAACCATGATC 59.366 47.826 0.00 0.00 38.94 2.92
42 43 3.549827 CGAAGAGAGGAGAACCATGATCG 60.550 52.174 0.00 0.00 38.94 3.69
43 44 3.304911 AGAGAGGAGAACCATGATCGA 57.695 47.619 0.00 0.00 38.94 3.59
44 45 3.636679 AGAGAGGAGAACCATGATCGAA 58.363 45.455 0.00 0.00 38.94 3.71
45 46 4.222336 AGAGAGGAGAACCATGATCGAAT 58.778 43.478 0.00 0.00 38.94 3.34
46 47 5.389520 AGAGAGGAGAACCATGATCGAATA 58.610 41.667 0.00 0.00 38.94 1.75
47 48 5.476599 AGAGAGGAGAACCATGATCGAATAG 59.523 44.000 0.00 0.00 38.94 1.73
48 49 5.389520 AGAGGAGAACCATGATCGAATAGA 58.610 41.667 0.00 0.00 38.94 1.98
49 50 5.476599 AGAGGAGAACCATGATCGAATAGAG 59.523 44.000 0.00 0.00 38.94 2.43
50 51 4.526262 AGGAGAACCATGATCGAATAGAGG 59.474 45.833 0.00 0.00 38.94 3.69
51 52 4.524714 GGAGAACCATGATCGAATAGAGGA 59.475 45.833 0.00 0.00 35.97 3.71
52 53 5.011125 GGAGAACCATGATCGAATAGAGGAA 59.989 44.000 0.00 0.00 35.97 3.36
53 54 6.095432 AGAACCATGATCGAATAGAGGAAG 57.905 41.667 0.00 0.00 0.00 3.46
54 55 4.881019 ACCATGATCGAATAGAGGAAGG 57.119 45.455 0.00 0.00 0.00 3.46
55 56 4.227197 ACCATGATCGAATAGAGGAAGGT 58.773 43.478 0.00 0.00 0.00 3.50
56 57 4.656112 ACCATGATCGAATAGAGGAAGGTT 59.344 41.667 0.00 0.00 0.00 3.50
57 58 4.993584 CCATGATCGAATAGAGGAAGGTTG 59.006 45.833 0.00 0.00 0.00 3.77
58 59 4.060038 TGATCGAATAGAGGAAGGTTGC 57.940 45.455 0.00 0.00 0.00 4.17
59 60 2.579207 TCGAATAGAGGAAGGTTGCG 57.421 50.000 0.00 0.00 0.00 4.85
60 61 0.931005 CGAATAGAGGAAGGTTGCGC 59.069 55.000 0.00 0.00 0.00 6.09
61 62 1.471676 CGAATAGAGGAAGGTTGCGCT 60.472 52.381 9.73 0.00 32.81 5.92
62 63 2.205911 GAATAGAGGAAGGTTGCGCTC 58.794 52.381 9.73 1.18 30.48 5.03
63 64 0.103208 ATAGAGGAAGGTTGCGCTCG 59.897 55.000 9.73 0.00 30.48 5.03
64 65 0.963856 TAGAGGAAGGTTGCGCTCGA 60.964 55.000 9.73 0.00 30.48 4.04
65 66 1.807573 GAGGAAGGTTGCGCTCGAG 60.808 63.158 9.73 8.45 0.00 4.04
66 67 2.815647 GGAAGGTTGCGCTCGAGG 60.816 66.667 15.58 5.53 0.00 4.63
67 68 2.261671 GAAGGTTGCGCTCGAGGA 59.738 61.111 15.58 0.00 0.00 3.71
68 69 1.374252 GAAGGTTGCGCTCGAGGAA 60.374 57.895 15.58 0.00 0.00 3.36
69 70 0.949105 GAAGGTTGCGCTCGAGGAAA 60.949 55.000 15.58 2.24 0.00 3.13
70 71 0.534203 AAGGTTGCGCTCGAGGAAAA 60.534 50.000 15.58 0.63 0.00 2.29
71 72 0.951040 AGGTTGCGCTCGAGGAAAAG 60.951 55.000 15.58 0.00 0.00 2.27
72 73 0.949105 GGTTGCGCTCGAGGAAAAGA 60.949 55.000 15.58 0.00 0.00 2.52
73 74 0.865769 GTTGCGCTCGAGGAAAAGAA 59.134 50.000 15.58 0.00 0.00 2.52
74 75 1.136224 GTTGCGCTCGAGGAAAAGAAG 60.136 52.381 15.58 0.00 0.00 2.85
75 76 0.670546 TGCGCTCGAGGAAAAGAAGG 60.671 55.000 15.58 0.00 0.00 3.46
76 77 0.670854 GCGCTCGAGGAAAAGAAGGT 60.671 55.000 15.58 0.00 0.00 3.50
77 78 1.071605 CGCTCGAGGAAAAGAAGGTG 58.928 55.000 15.58 0.00 0.00 4.00
78 79 1.336887 CGCTCGAGGAAAAGAAGGTGA 60.337 52.381 15.58 0.00 0.00 4.02
79 80 2.767505 GCTCGAGGAAAAGAAGGTGAA 58.232 47.619 15.58 0.00 0.00 3.18
80 81 2.739379 GCTCGAGGAAAAGAAGGTGAAG 59.261 50.000 15.58 0.00 0.00 3.02
81 82 3.555168 GCTCGAGGAAAAGAAGGTGAAGA 60.555 47.826 15.58 0.00 0.00 2.87
82 83 4.826556 CTCGAGGAAAAGAAGGTGAAGAT 58.173 43.478 3.91 0.00 0.00 2.40
83 84 4.822026 TCGAGGAAAAGAAGGTGAAGATC 58.178 43.478 0.00 0.00 0.00 2.75
84 85 3.614616 CGAGGAAAAGAAGGTGAAGATCG 59.385 47.826 0.00 0.00 0.00 3.69
85 86 3.339141 AGGAAAAGAAGGTGAAGATCGC 58.661 45.455 0.00 0.00 0.00 4.58
91 92 2.435938 GGTGAAGATCGCCGCCAA 60.436 61.111 12.97 0.00 37.29 4.52
92 93 1.819632 GGTGAAGATCGCCGCCAAT 60.820 57.895 12.97 0.00 37.29 3.16
93 94 1.353103 GTGAAGATCGCCGCCAATG 59.647 57.895 0.00 0.00 0.00 2.82
94 95 2.329339 GAAGATCGCCGCCAATGC 59.671 61.111 0.00 0.00 0.00 3.56
113 114 1.560923 CGGAGGACGCTAAGATGTTG 58.439 55.000 0.00 0.00 34.82 3.33
114 115 1.134367 CGGAGGACGCTAAGATGTTGA 59.866 52.381 0.00 0.00 34.82 3.18
115 116 2.541556 GGAGGACGCTAAGATGTTGAC 58.458 52.381 0.00 0.00 0.00 3.18
116 117 2.094182 GGAGGACGCTAAGATGTTGACA 60.094 50.000 0.00 0.00 0.00 3.58
117 118 3.430929 GGAGGACGCTAAGATGTTGACAT 60.431 47.826 0.00 0.00 39.70 3.06
118 119 4.184629 GAGGACGCTAAGATGTTGACATT 58.815 43.478 0.00 0.00 36.57 2.71
119 120 3.935203 AGGACGCTAAGATGTTGACATTG 59.065 43.478 0.00 0.00 36.57 2.82
120 121 3.932710 GGACGCTAAGATGTTGACATTGA 59.067 43.478 0.00 0.00 36.57 2.57
121 122 4.391830 GGACGCTAAGATGTTGACATTGAA 59.608 41.667 0.00 0.00 36.57 2.69
122 123 5.065218 GGACGCTAAGATGTTGACATTGAAT 59.935 40.000 0.00 0.00 36.57 2.57
123 124 5.872635 ACGCTAAGATGTTGACATTGAATG 58.127 37.500 3.16 3.16 36.57 2.67
125 126 5.735892 CGCTAAGATGTTGACATTGAATGTG 59.264 40.000 16.52 0.00 45.03 3.21
126 127 6.032094 GCTAAGATGTTGACATTGAATGTGG 58.968 40.000 16.52 0.00 45.03 4.17
127 128 6.127925 GCTAAGATGTTGACATTGAATGTGGA 60.128 38.462 16.52 0.73 45.03 4.02
128 129 6.653526 AAGATGTTGACATTGAATGTGGAA 57.346 33.333 16.52 5.46 45.03 3.53
129 130 6.845758 AGATGTTGACATTGAATGTGGAAT 57.154 33.333 16.52 4.02 45.03 3.01
130 131 6.860080 AGATGTTGACATTGAATGTGGAATC 58.140 36.000 16.52 12.27 45.03 2.52
131 132 6.662234 AGATGTTGACATTGAATGTGGAATCT 59.338 34.615 16.52 14.09 45.03 2.40
132 133 6.653526 TGTTGACATTGAATGTGGAATCTT 57.346 33.333 16.52 0.00 45.03 2.40
133 134 7.053316 TGTTGACATTGAATGTGGAATCTTT 57.947 32.000 16.52 0.00 45.03 2.52
134 135 6.924612 TGTTGACATTGAATGTGGAATCTTTG 59.075 34.615 16.52 0.00 45.03 2.77
135 136 6.028146 TGACATTGAATGTGGAATCTTTGG 57.972 37.500 16.52 0.00 45.03 3.28
136 137 5.774184 TGACATTGAATGTGGAATCTTTGGA 59.226 36.000 16.52 0.00 45.03 3.53
137 138 6.438108 TGACATTGAATGTGGAATCTTTGGAT 59.562 34.615 16.52 0.00 45.03 3.41
138 139 6.636705 ACATTGAATGTGGAATCTTTGGATG 58.363 36.000 10.45 0.00 43.01 3.51
139 140 4.724074 TGAATGTGGAATCTTTGGATGC 57.276 40.909 0.00 0.00 31.75 3.91
140 141 3.448301 TGAATGTGGAATCTTTGGATGCC 59.552 43.478 0.00 0.00 45.86 4.40
144 145 0.657840 GGAATCTTTGGATGCCGACG 59.342 55.000 0.00 0.00 37.86 5.12
145 146 0.028110 GAATCTTTGGATGCCGACGC 59.972 55.000 0.00 0.00 31.75 5.19
154 155 4.615901 TGCCGACGCAAGAATGAT 57.384 50.000 0.00 0.00 43.74 2.45
155 156 2.383170 TGCCGACGCAAGAATGATC 58.617 52.632 0.00 0.00 43.74 2.92
156 157 1.273887 GCCGACGCAAGAATGATCG 59.726 57.895 0.00 0.00 43.62 3.69
157 158 1.421410 GCCGACGCAAGAATGATCGT 61.421 55.000 0.00 0.00 43.62 3.73
158 159 0.298707 CCGACGCAAGAATGATCGTG 59.701 55.000 0.00 0.00 43.62 4.35
163 164 3.504043 CAAGAATGATCGTGCAGCG 57.496 52.632 0.00 0.00 43.01 5.18
164 165 0.027194 CAAGAATGATCGTGCAGCGG 59.973 55.000 8.46 0.00 41.72 5.52
165 166 1.091771 AAGAATGATCGTGCAGCGGG 61.092 55.000 8.46 0.00 41.72 6.13
166 167 1.521457 GAATGATCGTGCAGCGGGA 60.521 57.895 8.46 0.00 41.72 5.14
167 168 1.493950 GAATGATCGTGCAGCGGGAG 61.494 60.000 8.46 0.00 41.72 4.30
168 169 1.960040 AATGATCGTGCAGCGGGAGA 61.960 55.000 8.46 0.00 41.72 3.71
169 170 1.960040 ATGATCGTGCAGCGGGAGAA 61.960 55.000 8.46 0.00 41.72 2.87
170 171 1.447838 GATCGTGCAGCGGGAGAAA 60.448 57.895 8.46 0.00 41.72 2.52
171 172 1.003839 ATCGTGCAGCGGGAGAAAA 60.004 52.632 8.46 0.00 41.72 2.29
172 173 0.605319 ATCGTGCAGCGGGAGAAAAA 60.605 50.000 8.46 0.00 41.72 1.94
173 174 0.605319 TCGTGCAGCGGGAGAAAAAT 60.605 50.000 8.46 0.00 41.72 1.82
174 175 0.179189 CGTGCAGCGGGAGAAAAATC 60.179 55.000 0.00 0.00 36.85 2.17
175 176 0.881118 GTGCAGCGGGAGAAAAATCA 59.119 50.000 0.00 0.00 0.00 2.57
176 177 1.135575 GTGCAGCGGGAGAAAAATCAG 60.136 52.381 0.00 0.00 0.00 2.90
177 178 1.168714 GCAGCGGGAGAAAAATCAGT 58.831 50.000 0.00 0.00 0.00 3.41
178 179 1.541588 GCAGCGGGAGAAAAATCAGTT 59.458 47.619 0.00 0.00 0.00 3.16
179 180 2.669391 GCAGCGGGAGAAAAATCAGTTG 60.669 50.000 0.00 0.00 0.00 3.16
180 181 2.095059 CAGCGGGAGAAAAATCAGTTGG 60.095 50.000 0.00 0.00 0.00 3.77
181 182 1.402852 GCGGGAGAAAAATCAGTTGGC 60.403 52.381 0.00 0.00 0.00 4.52
182 183 1.135689 CGGGAGAAAAATCAGTTGGCG 60.136 52.381 0.00 0.00 0.00 5.69
183 184 1.202348 GGGAGAAAAATCAGTTGGCGG 59.798 52.381 0.00 0.00 0.00 6.13
184 185 1.402852 GGAGAAAAATCAGTTGGCGGC 60.403 52.381 0.00 0.00 0.00 6.53
185 186 0.240945 AGAAAAATCAGTTGGCGGCG 59.759 50.000 0.51 0.51 0.00 6.46
186 187 0.732538 GAAAAATCAGTTGGCGGCGG 60.733 55.000 9.78 0.00 0.00 6.13
187 188 2.763627 AAAAATCAGTTGGCGGCGGC 62.764 55.000 27.76 27.76 38.90 6.53
197 198 3.929948 GCGGCGGCGAAGAATGAG 61.930 66.667 36.87 2.46 0.00 2.90
198 199 3.264897 CGGCGGCGAAGAATGAGG 61.265 66.667 29.19 0.00 0.00 3.86
199 200 2.186903 GGCGGCGAAGAATGAGGA 59.813 61.111 12.98 0.00 0.00 3.71
200 201 1.227674 GGCGGCGAAGAATGAGGAT 60.228 57.895 12.98 0.00 0.00 3.24
201 202 1.502163 GGCGGCGAAGAATGAGGATG 61.502 60.000 12.98 0.00 0.00 3.51
202 203 1.937391 CGGCGAAGAATGAGGATGC 59.063 57.895 0.00 0.00 0.00 3.91
203 204 1.825285 CGGCGAAGAATGAGGATGCG 61.825 60.000 0.00 0.00 0.00 4.73
204 205 1.502163 GGCGAAGAATGAGGATGCGG 61.502 60.000 0.00 0.00 0.00 5.69
205 206 1.937391 CGAAGAATGAGGATGCGGC 59.063 57.895 0.00 0.00 0.00 6.53
206 207 1.825285 CGAAGAATGAGGATGCGGCG 61.825 60.000 0.51 0.51 0.00 6.46
207 208 0.530650 GAAGAATGAGGATGCGGCGA 60.531 55.000 12.98 0.00 0.00 5.54
208 209 0.107703 AAGAATGAGGATGCGGCGAA 60.108 50.000 12.98 0.00 0.00 4.70
209 210 0.531532 AGAATGAGGATGCGGCGAAG 60.532 55.000 12.98 0.00 0.00 3.79
210 211 1.502163 GAATGAGGATGCGGCGAAGG 61.502 60.000 12.98 0.00 0.00 3.46
221 222 4.856607 GCGAAGGCGACGGAGGAG 62.857 72.222 0.00 0.00 40.82 3.69
222 223 4.194720 CGAAGGCGACGGAGGAGG 62.195 72.222 0.00 0.00 40.82 4.30
223 224 2.754658 GAAGGCGACGGAGGAGGA 60.755 66.667 0.00 0.00 0.00 3.71
224 225 2.042843 AAGGCGACGGAGGAGGAT 60.043 61.111 0.00 0.00 0.00 3.24
225 226 2.356818 GAAGGCGACGGAGGAGGATG 62.357 65.000 0.00 0.00 0.00 3.51
226 227 3.917760 GGCGACGGAGGAGGATGG 61.918 72.222 0.00 0.00 0.00 3.51
227 228 3.917760 GCGACGGAGGAGGATGGG 61.918 72.222 0.00 0.00 0.00 4.00
228 229 2.123854 CGACGGAGGAGGATGGGA 60.124 66.667 0.00 0.00 0.00 4.37
229 230 1.756950 CGACGGAGGAGGATGGGAA 60.757 63.158 0.00 0.00 0.00 3.97
230 231 1.739338 CGACGGAGGAGGATGGGAAG 61.739 65.000 0.00 0.00 0.00 3.46
231 232 1.383248 ACGGAGGAGGATGGGAAGG 60.383 63.158 0.00 0.00 0.00 3.46
232 233 1.383248 CGGAGGAGGATGGGAAGGT 60.383 63.158 0.00 0.00 0.00 3.50
233 234 0.983378 CGGAGGAGGATGGGAAGGTT 60.983 60.000 0.00 0.00 0.00 3.50
234 235 0.548510 GGAGGAGGATGGGAAGGTTG 59.451 60.000 0.00 0.00 0.00 3.77
235 236 1.290134 GAGGAGGATGGGAAGGTTGT 58.710 55.000 0.00 0.00 0.00 3.32
236 237 0.995024 AGGAGGATGGGAAGGTTGTG 59.005 55.000 0.00 0.00 0.00 3.33
237 238 0.698818 GGAGGATGGGAAGGTTGTGT 59.301 55.000 0.00 0.00 0.00 3.72
238 239 1.913419 GGAGGATGGGAAGGTTGTGTA 59.087 52.381 0.00 0.00 0.00 2.90
239 240 2.509964 GGAGGATGGGAAGGTTGTGTAT 59.490 50.000 0.00 0.00 0.00 2.29
240 241 3.545703 GAGGATGGGAAGGTTGTGTATG 58.454 50.000 0.00 0.00 0.00 2.39
241 242 2.024414 GGATGGGAAGGTTGTGTATGC 58.976 52.381 0.00 0.00 0.00 3.14
242 243 1.670811 GATGGGAAGGTTGTGTATGCG 59.329 52.381 0.00 0.00 0.00 4.73
243 244 0.322098 TGGGAAGGTTGTGTATGCGG 60.322 55.000 0.00 0.00 0.00 5.69
244 245 1.654023 GGGAAGGTTGTGTATGCGGC 61.654 60.000 0.00 0.00 0.00 6.53
245 246 1.423845 GAAGGTTGTGTATGCGGCG 59.576 57.895 0.51 0.51 0.00 6.46
246 247 1.977594 GAAGGTTGTGTATGCGGCGG 61.978 60.000 9.78 0.00 0.00 6.13
247 248 4.174129 GGTTGTGTATGCGGCGGC 62.174 66.667 9.78 9.68 40.52 6.53
248 249 4.514569 GTTGTGTATGCGGCGGCG 62.515 66.667 28.70 28.70 44.10 6.46
267 268 4.015406 TGGCGACGGCACCTTGAT 62.015 61.111 21.29 0.00 42.47 2.57
268 269 3.195698 GGCGACGGCACCTTGATC 61.196 66.667 17.49 0.00 42.47 2.92
269 270 3.554692 GCGACGGCACCTTGATCG 61.555 66.667 0.00 0.00 39.62 3.69
270 271 2.885644 CGACGGCACCTTGATCGG 60.886 66.667 0.00 0.00 0.00 4.18
271 272 2.511600 GACGGCACCTTGATCGGG 60.512 66.667 3.37 3.37 0.00 5.14
272 273 3.000819 ACGGCACCTTGATCGGGA 61.001 61.111 10.90 0.00 0.00 5.14
273 274 2.267642 CGGCACCTTGATCGGGAA 59.732 61.111 10.90 0.00 0.00 3.97
274 275 1.815421 CGGCACCTTGATCGGGAAG 60.815 63.158 10.90 0.00 0.00 3.46
275 276 2.115291 GGCACCTTGATCGGGAAGC 61.115 63.158 10.90 12.49 0.00 3.86
276 277 1.377202 GCACCTTGATCGGGAAGCA 60.377 57.895 10.90 0.00 0.00 3.91
277 278 1.648467 GCACCTTGATCGGGAAGCAC 61.648 60.000 10.90 0.00 0.00 4.40
278 279 0.321564 CACCTTGATCGGGAAGCACA 60.322 55.000 10.90 0.00 0.00 4.57
279 280 0.620556 ACCTTGATCGGGAAGCACAT 59.379 50.000 10.90 0.00 0.00 3.21
280 281 1.019673 CCTTGATCGGGAAGCACATG 58.980 55.000 0.00 0.00 0.00 3.21
281 282 1.019673 CTTGATCGGGAAGCACATGG 58.980 55.000 0.00 0.00 0.00 3.66
282 283 1.031571 TTGATCGGGAAGCACATGGC 61.032 55.000 0.00 0.00 45.30 4.40
291 292 2.497770 GCACATGGCTGGGATTGC 59.502 61.111 0.00 0.00 40.25 3.56
292 293 2.056223 GCACATGGCTGGGATTGCT 61.056 57.895 0.00 0.00 40.25 3.91
293 294 1.813859 CACATGGCTGGGATTGCTG 59.186 57.895 0.00 0.00 0.00 4.41
294 295 1.380785 ACATGGCTGGGATTGCTGG 60.381 57.895 0.00 0.00 0.00 4.85
295 296 1.380785 CATGGCTGGGATTGCTGGT 60.381 57.895 0.00 0.00 0.00 4.00
296 297 1.076485 ATGGCTGGGATTGCTGGTC 60.076 57.895 0.00 0.00 0.00 4.02
297 298 2.440980 GGCTGGGATTGCTGGTCC 60.441 66.667 0.00 0.00 34.92 4.46
298 299 2.825836 GCTGGGATTGCTGGTCCG 60.826 66.667 0.00 0.00 36.58 4.79
299 300 2.989639 CTGGGATTGCTGGTCCGA 59.010 61.111 0.00 0.00 36.58 4.55
300 301 1.528824 CTGGGATTGCTGGTCCGAT 59.471 57.895 0.00 0.00 36.58 4.18
301 302 0.758734 CTGGGATTGCTGGTCCGATA 59.241 55.000 0.00 0.00 36.58 2.92
302 303 0.758734 TGGGATTGCTGGTCCGATAG 59.241 55.000 0.00 0.00 36.58 2.08
303 304 1.048601 GGGATTGCTGGTCCGATAGA 58.951 55.000 0.00 0.00 36.58 1.98
304 305 1.001406 GGGATTGCTGGTCCGATAGAG 59.999 57.143 0.00 0.00 36.58 2.43
305 306 1.606737 GGATTGCTGGTCCGATAGAGC 60.607 57.143 0.00 0.00 43.62 4.09
315 316 5.908916 GGTCCGATAGAGCAGAAAATTAC 57.091 43.478 0.00 0.00 42.81 1.89
316 317 5.357257 GGTCCGATAGAGCAGAAAATTACA 58.643 41.667 0.00 0.00 42.81 2.41
317 318 5.234543 GGTCCGATAGAGCAGAAAATTACAC 59.765 44.000 0.00 0.00 42.81 2.90
318 319 5.041287 TCCGATAGAGCAGAAAATTACACG 58.959 41.667 0.00 0.00 39.76 4.49
319 320 4.209288 CCGATAGAGCAGAAAATTACACGG 59.791 45.833 0.00 0.00 39.76 4.94
320 321 5.041287 CGATAGAGCAGAAAATTACACGGA 58.959 41.667 0.00 0.00 39.76 4.69
321 322 5.692204 CGATAGAGCAGAAAATTACACGGAT 59.308 40.000 0.00 0.00 39.76 4.18
322 323 6.201044 CGATAGAGCAGAAAATTACACGGATT 59.799 38.462 0.00 0.00 39.76 3.01
323 324 7.381408 CGATAGAGCAGAAAATTACACGGATTA 59.619 37.037 0.00 0.00 39.76 1.75
324 325 6.663944 AGAGCAGAAAATTACACGGATTAC 57.336 37.500 0.00 0.00 0.00 1.89
325 326 5.585047 AGAGCAGAAAATTACACGGATTACC 59.415 40.000 0.00 0.00 0.00 2.85
341 342 6.451064 GGATTACCGGATTGATGTTCTTTT 57.549 37.500 9.46 0.00 0.00 2.27
342 343 7.562454 GGATTACCGGATTGATGTTCTTTTA 57.438 36.000 9.46 0.00 0.00 1.52
343 344 7.639945 GGATTACCGGATTGATGTTCTTTTAG 58.360 38.462 9.46 0.00 0.00 1.85
344 345 7.497909 GGATTACCGGATTGATGTTCTTTTAGA 59.502 37.037 9.46 0.00 0.00 2.10
345 346 8.980481 ATTACCGGATTGATGTTCTTTTAGAT 57.020 30.769 9.46 0.00 0.00 1.98
346 347 8.801882 TTACCGGATTGATGTTCTTTTAGATT 57.198 30.769 9.46 0.00 0.00 2.40
347 348 7.321745 ACCGGATTGATGTTCTTTTAGATTC 57.678 36.000 9.46 0.00 0.00 2.52
348 349 6.037172 ACCGGATTGATGTTCTTTTAGATTCG 59.963 38.462 9.46 0.00 0.00 3.34
349 350 6.422223 CGGATTGATGTTCTTTTAGATTCGG 58.578 40.000 0.00 0.00 0.00 4.30
350 351 6.257849 CGGATTGATGTTCTTTTAGATTCGGA 59.742 38.462 0.00 0.00 0.00 4.55
351 352 7.410485 GGATTGATGTTCTTTTAGATTCGGAC 58.590 38.462 0.00 0.00 0.00 4.79
352 353 7.065803 GGATTGATGTTCTTTTAGATTCGGACA 59.934 37.037 0.00 0.00 0.00 4.02
353 354 7.921786 TTGATGTTCTTTTAGATTCGGACAT 57.078 32.000 0.00 0.00 0.00 3.06
354 355 7.307493 TGATGTTCTTTTAGATTCGGACATG 57.693 36.000 0.00 0.00 0.00 3.21
355 356 6.878923 TGATGTTCTTTTAGATTCGGACATGT 59.121 34.615 0.00 0.00 0.00 3.21
356 357 8.038351 TGATGTTCTTTTAGATTCGGACATGTA 58.962 33.333 0.00 0.00 0.00 2.29
357 358 8.786826 ATGTTCTTTTAGATTCGGACATGTAA 57.213 30.769 0.00 0.00 0.00 2.41
358 359 8.610248 TGTTCTTTTAGATTCGGACATGTAAA 57.390 30.769 0.00 0.00 0.00 2.01
359 360 9.058174 TGTTCTTTTAGATTCGGACATGTAAAA 57.942 29.630 0.00 0.00 33.27 1.52
360 361 9.543018 GTTCTTTTAGATTCGGACATGTAAAAG 57.457 33.333 20.82 20.82 44.18 2.27
361 362 9.496873 TTCTTTTAGATTCGGACATGTAAAAGA 57.503 29.630 22.85 22.85 46.73 2.52
362 363 9.667107 TCTTTTAGATTCGGACATGTAAAAGAT 57.333 29.630 22.85 3.74 45.24 2.40
367 368 8.786826 AGATTCGGACATGTAAAAGATAAACA 57.213 30.769 0.00 0.00 0.00 2.83
368 369 9.396022 AGATTCGGACATGTAAAAGATAAACAT 57.604 29.630 0.00 0.00 34.22 2.71
371 372 9.661563 TTCGGACATGTAAAAGATAAACATACT 57.338 29.630 0.00 0.00 32.70 2.12
372 373 9.661563 TCGGACATGTAAAAGATAAACATACTT 57.338 29.630 0.00 0.00 32.70 2.24
373 374 9.702726 CGGACATGTAAAAGATAAACATACTTG 57.297 33.333 0.00 0.00 32.70 3.16
399 400 4.829064 TTTTTATAGTGATCGGGCATGC 57.171 40.909 9.90 9.90 0.00 4.06
400 401 3.769739 TTTATAGTGATCGGGCATGCT 57.230 42.857 18.92 0.00 0.00 3.79
401 402 4.882842 TTTATAGTGATCGGGCATGCTA 57.117 40.909 18.92 3.90 0.00 3.49
402 403 5.420725 TTTATAGTGATCGGGCATGCTAT 57.579 39.130 18.92 9.00 0.00 2.97
403 404 3.533606 ATAGTGATCGGGCATGCTATC 57.466 47.619 18.92 17.34 0.00 2.08
404 405 0.037882 AGTGATCGGGCATGCTATCG 60.038 55.000 18.92 18.15 0.00 2.92
405 406 0.038251 GTGATCGGGCATGCTATCGA 60.038 55.000 24.42 24.42 36.07 3.59
406 407 0.038251 TGATCGGGCATGCTATCGAC 60.038 55.000 24.59 19.57 34.40 4.20
407 408 1.073216 GATCGGGCATGCTATCGACG 61.073 60.000 24.59 16.64 34.40 5.12
408 409 3.406361 CGGGCATGCTATCGACGC 61.406 66.667 18.92 1.78 0.00 5.19
409 410 3.406361 GGGCATGCTATCGACGCG 61.406 66.667 18.92 3.53 0.00 6.01
410 411 2.354656 GGCATGCTATCGACGCGA 60.355 61.111 18.92 4.51 41.13 5.87
412 413 1.413750 GCATGCTATCGACGCGATG 59.586 57.895 15.93 4.17 46.43 3.84
413 414 1.278172 GCATGCTATCGACGCGATGT 61.278 55.000 15.93 0.00 46.43 3.06
414 415 0.432361 CATGCTATCGACGCGATGTG 59.568 55.000 15.93 14.65 46.43 3.21
415 416 0.030773 ATGCTATCGACGCGATGTGT 59.969 50.000 15.93 0.00 46.43 3.72
416 417 0.865639 TGCTATCGACGCGATGTGTG 60.866 55.000 15.93 0.00 46.43 3.82
417 418 1.540607 GCTATCGACGCGATGTGTGG 61.541 60.000 15.93 0.00 46.43 4.17
418 419 0.028902 CTATCGACGCGATGTGTGGA 59.971 55.000 15.93 0.00 46.43 4.02
419 420 0.666374 TATCGACGCGATGTGTGGAT 59.334 50.000 15.93 11.67 46.43 3.41
420 421 0.595053 ATCGACGCGATGTGTGGATC 60.595 55.000 15.93 0.00 45.24 3.36
421 422 2.568031 CGACGCGATGTGTGGATCG 61.568 63.158 15.93 3.96 46.54 3.69
422 423 2.202743 ACGCGATGTGTGGATCGG 60.203 61.111 15.93 0.00 44.45 4.18
423 424 2.104132 CGCGATGTGTGGATCGGA 59.896 61.111 0.00 0.00 44.45 4.55
424 425 1.946156 CGCGATGTGTGGATCGGAG 60.946 63.158 0.00 0.00 44.45 4.63
425 426 1.141881 GCGATGTGTGGATCGGAGT 59.858 57.895 0.00 0.00 44.45 3.85
426 427 0.384309 GCGATGTGTGGATCGGAGTA 59.616 55.000 0.00 0.00 44.45 2.59
427 428 1.202371 GCGATGTGTGGATCGGAGTAA 60.202 52.381 0.00 0.00 44.45 2.24
428 429 2.737359 GCGATGTGTGGATCGGAGTAAA 60.737 50.000 0.00 0.00 44.45 2.01
429 430 3.717707 CGATGTGTGGATCGGAGTAAAT 58.282 45.455 0.00 0.00 41.29 1.40
430 431 4.119862 CGATGTGTGGATCGGAGTAAATT 58.880 43.478 0.00 0.00 41.29 1.82
431 432 4.570772 CGATGTGTGGATCGGAGTAAATTT 59.429 41.667 0.00 0.00 41.29 1.82
432 433 5.751509 CGATGTGTGGATCGGAGTAAATTTA 59.248 40.000 0.00 0.00 41.29 1.40
433 434 6.256975 CGATGTGTGGATCGGAGTAAATTTAA 59.743 38.462 0.00 0.00 41.29 1.52
434 435 7.201574 CGATGTGTGGATCGGAGTAAATTTAAA 60.202 37.037 0.00 0.00 41.29 1.52
435 436 7.931578 TGTGTGGATCGGAGTAAATTTAAAT 57.068 32.000 0.00 0.00 0.00 1.40
436 437 8.343168 TGTGTGGATCGGAGTAAATTTAAATT 57.657 30.769 7.64 7.64 0.00 1.82
437 438 8.798402 TGTGTGGATCGGAGTAAATTTAAATTT 58.202 29.630 25.18 25.18 41.24 1.82
483 484 6.910536 AGAATAACATTGAATGACGGTCTC 57.089 37.500 12.80 0.00 0.00 3.36
484 485 5.520288 AGAATAACATTGAATGACGGTCTCG 59.480 40.000 12.80 0.00 43.02 4.04
485 486 1.359848 ACATTGAATGACGGTCTCGC 58.640 50.000 12.80 0.00 40.63 5.03
486 487 0.298707 CATTGAATGACGGTCTCGCG 59.701 55.000 9.88 0.00 40.63 5.87
487 488 0.108804 ATTGAATGACGGTCTCGCGT 60.109 50.000 5.77 0.00 40.63 6.01
488 489 0.319211 TTGAATGACGGTCTCGCGTT 60.319 50.000 5.77 0.00 40.63 4.84
489 490 0.731514 TGAATGACGGTCTCGCGTTC 60.732 55.000 5.77 0.00 40.63 3.95
490 491 0.731514 GAATGACGGTCTCGCGTTCA 60.732 55.000 5.77 0.89 40.63 3.18
491 492 0.108804 AATGACGGTCTCGCGTTCAT 60.109 50.000 5.77 3.33 40.63 2.57
492 493 0.802222 ATGACGGTCTCGCGTTCATG 60.802 55.000 5.77 0.00 40.63 3.07
493 494 2.789203 GACGGTCTCGCGTTCATGC 61.789 63.158 5.77 0.00 40.63 4.06
494 495 3.554692 CGGTCTCGCGTTCATGCC 61.555 66.667 5.77 0.41 0.00 4.40
495 496 3.195698 GGTCTCGCGTTCATGCCC 61.196 66.667 5.77 0.00 0.00 5.36
496 497 2.125512 GTCTCGCGTTCATGCCCT 60.126 61.111 5.77 0.00 0.00 5.19
497 498 1.741770 GTCTCGCGTTCATGCCCTT 60.742 57.895 5.77 0.00 0.00 3.95
498 499 1.447838 TCTCGCGTTCATGCCCTTC 60.448 57.895 5.77 0.00 0.00 3.46
499 500 2.435938 TCGCGTTCATGCCCTTCC 60.436 61.111 5.77 0.00 0.00 3.46
500 501 2.745884 CGCGTTCATGCCCTTCCA 60.746 61.111 0.00 0.00 0.00 3.53
501 502 2.753966 CGCGTTCATGCCCTTCCAG 61.754 63.158 0.00 0.00 0.00 3.86
502 503 1.377202 GCGTTCATGCCCTTCCAGA 60.377 57.895 0.00 0.00 0.00 3.86
503 504 0.749454 GCGTTCATGCCCTTCCAGAT 60.749 55.000 0.00 0.00 0.00 2.90
504 505 1.475034 GCGTTCATGCCCTTCCAGATA 60.475 52.381 0.00 0.00 0.00 1.98
505 506 2.917933 CGTTCATGCCCTTCCAGATAA 58.082 47.619 0.00 0.00 0.00 1.75
506 507 3.480470 CGTTCATGCCCTTCCAGATAAT 58.520 45.455 0.00 0.00 0.00 1.28
507 508 3.885297 CGTTCATGCCCTTCCAGATAATT 59.115 43.478 0.00 0.00 0.00 1.40
508 509 4.339247 CGTTCATGCCCTTCCAGATAATTT 59.661 41.667 0.00 0.00 0.00 1.82
509 510 5.594926 GTTCATGCCCTTCCAGATAATTTG 58.405 41.667 0.00 0.00 0.00 2.32
510 511 4.870636 TCATGCCCTTCCAGATAATTTGT 58.129 39.130 0.00 0.00 0.00 2.83
511 512 4.646040 TCATGCCCTTCCAGATAATTTGTG 59.354 41.667 0.00 0.00 0.00 3.33
512 513 3.364549 TGCCCTTCCAGATAATTTGTGG 58.635 45.455 0.00 0.00 0.00 4.17
513 514 3.011144 TGCCCTTCCAGATAATTTGTGGA 59.989 43.478 3.44 3.44 38.65 4.02
514 515 4.218312 GCCCTTCCAGATAATTTGTGGAT 58.782 43.478 7.14 0.00 40.11 3.41
515 516 4.651045 GCCCTTCCAGATAATTTGTGGATT 59.349 41.667 7.14 0.00 40.11 3.01
516 517 5.452356 GCCCTTCCAGATAATTTGTGGATTG 60.452 44.000 7.14 4.87 40.11 2.67
517 518 5.452356 CCCTTCCAGATAATTTGTGGATTGC 60.452 44.000 7.14 0.00 40.11 3.56
518 519 5.127519 CCTTCCAGATAATTTGTGGATTGCA 59.872 40.000 7.14 0.00 40.11 4.08
519 520 6.183360 CCTTCCAGATAATTTGTGGATTGCAT 60.183 38.462 7.14 0.00 40.11 3.96
520 521 6.795144 TCCAGATAATTTGTGGATTGCATT 57.205 33.333 0.00 0.00 35.36 3.56
521 522 7.185318 TCCAGATAATTTGTGGATTGCATTT 57.815 32.000 0.00 0.00 35.36 2.32
522 523 7.042950 TCCAGATAATTTGTGGATTGCATTTG 58.957 34.615 0.00 0.00 35.36 2.32
523 524 6.259167 CCAGATAATTTGTGGATTGCATTTGG 59.741 38.462 0.00 0.00 32.60 3.28
524 525 7.042950 CAGATAATTTGTGGATTGCATTTGGA 58.957 34.615 0.00 0.00 0.00 3.53
525 526 7.223971 CAGATAATTTGTGGATTGCATTTGGAG 59.776 37.037 0.00 0.00 0.00 3.86
526 527 5.486735 AATTTGTGGATTGCATTTGGAGA 57.513 34.783 0.00 0.00 0.00 3.71
527 528 5.687166 ATTTGTGGATTGCATTTGGAGAT 57.313 34.783 0.00 0.00 0.00 2.75
528 529 5.486735 TTTGTGGATTGCATTTGGAGATT 57.513 34.783 0.00 0.00 0.00 2.40
529 530 6.602410 TTTGTGGATTGCATTTGGAGATTA 57.398 33.333 0.00 0.00 0.00 1.75
530 531 5.581126 TGTGGATTGCATTTGGAGATTAC 57.419 39.130 0.00 0.00 0.00 1.89
531 532 4.402155 TGTGGATTGCATTTGGAGATTACC 59.598 41.667 0.00 0.00 0.00 2.85
532 533 3.631686 TGGATTGCATTTGGAGATTACCG 59.368 43.478 0.00 0.00 0.00 4.02
533 534 3.632145 GGATTGCATTTGGAGATTACCGT 59.368 43.478 0.00 0.00 0.00 4.83
534 535 4.498009 GGATTGCATTTGGAGATTACCGTG 60.498 45.833 0.00 0.00 0.00 4.94
535 536 2.364632 TGCATTTGGAGATTACCGTGG 58.635 47.619 0.00 0.00 0.00 4.94
536 537 2.026729 TGCATTTGGAGATTACCGTGGA 60.027 45.455 0.00 0.00 0.00 4.02
537 538 3.013921 GCATTTGGAGATTACCGTGGAA 58.986 45.455 0.00 0.00 0.00 3.53
538 539 3.065371 GCATTTGGAGATTACCGTGGAAG 59.935 47.826 0.00 0.00 0.00 3.46
539 540 4.513442 CATTTGGAGATTACCGTGGAAGA 58.487 43.478 0.00 0.00 0.00 2.87
540 541 4.627284 TTTGGAGATTACCGTGGAAGAA 57.373 40.909 0.00 0.00 0.00 2.52
541 542 4.627284 TTGGAGATTACCGTGGAAGAAA 57.373 40.909 0.00 0.00 0.00 2.52
542 543 4.627284 TGGAGATTACCGTGGAAGAAAA 57.373 40.909 0.00 0.00 0.00 2.29
543 544 4.975631 TGGAGATTACCGTGGAAGAAAAA 58.024 39.130 0.00 0.00 0.00 1.94
636 642 1.645455 CGAGATTTGCCAGATGCGG 59.355 57.895 0.00 0.00 45.60 5.69
732 738 3.999948 GGGTATACGCCGCCCCTC 62.000 72.222 8.71 0.00 36.46 4.30
816 825 1.511305 CGGCCGTCTCTGCTTTCTA 59.489 57.895 19.50 0.00 0.00 2.10
817 826 0.802607 CGGCCGTCTCTGCTTTCTAC 60.803 60.000 19.50 0.00 0.00 2.59
818 827 0.533032 GGCCGTCTCTGCTTTCTACT 59.467 55.000 0.00 0.00 0.00 2.57
819 828 1.749634 GGCCGTCTCTGCTTTCTACTA 59.250 52.381 0.00 0.00 0.00 1.82
820 829 2.479901 GGCCGTCTCTGCTTTCTACTAC 60.480 54.545 0.00 0.00 0.00 2.73
821 830 2.163815 GCCGTCTCTGCTTTCTACTACA 59.836 50.000 0.00 0.00 0.00 2.74
822 831 3.760537 CCGTCTCTGCTTTCTACTACAC 58.239 50.000 0.00 0.00 0.00 2.90
823 832 3.418094 CGTCTCTGCTTTCTACTACACG 58.582 50.000 0.00 0.00 0.00 4.49
945 981 2.549611 CTTCCACTCCTCACCGCTCG 62.550 65.000 0.00 0.00 0.00 5.03
946 982 3.374402 CCACTCCTCACCGCTCGT 61.374 66.667 0.00 0.00 0.00 4.18
947 983 2.179517 CACTCCTCACCGCTCGTC 59.820 66.667 0.00 0.00 0.00 4.20
996 1035 2.506472 GAGCTCCCCGTGATTCCC 59.494 66.667 0.87 0.00 0.00 3.97
999 1038 3.861797 CTCCCCGTGATTCCCCCG 61.862 72.222 0.00 0.00 0.00 5.73
1007 1046 1.687840 TGATTCCCCCGATGGACGT 60.688 57.895 0.00 0.00 40.78 4.34
1014 1053 4.758251 CCGATGGACGTGCTGCCA 62.758 66.667 8.99 1.78 40.78 4.92
1131 1173 6.832384 ACTCCTCCGTTACTTCTTATATGTCA 59.168 38.462 0.00 0.00 0.00 3.58
1151 1193 6.997655 TGTCAACATCCTATTATGAGCTAGG 58.002 40.000 0.00 0.00 36.60 3.02
1152 1194 6.782494 TGTCAACATCCTATTATGAGCTAGGA 59.218 38.462 3.15 3.15 45.71 2.94
1153 1195 7.039434 TGTCAACATCCTATTATGAGCTAGGAG 60.039 40.741 6.79 2.50 45.05 3.69
1154 1196 7.013220 TCAACATCCTATTATGAGCTAGGAGT 58.987 38.462 6.79 3.02 45.05 3.85
1155 1197 8.170730 TCAACATCCTATTATGAGCTAGGAGTA 58.829 37.037 6.79 0.00 45.05 2.59
1156 1198 8.976353 CAACATCCTATTATGAGCTAGGAGTAT 58.024 37.037 6.79 0.00 45.05 2.12
1157 1199 8.760980 ACATCCTATTATGAGCTAGGAGTATC 57.239 38.462 6.79 0.00 45.05 2.24
1158 1200 7.500892 ACATCCTATTATGAGCTAGGAGTATCG 59.499 40.741 6.79 0.00 45.05 2.92
1159 1201 7.196637 TCCTATTATGAGCTAGGAGTATCGA 57.803 40.000 0.00 0.00 38.84 3.59
1160 1202 7.631007 TCCTATTATGAGCTAGGAGTATCGAA 58.369 38.462 0.00 0.00 38.84 3.71
1161 1203 8.107729 TCCTATTATGAGCTAGGAGTATCGAAA 58.892 37.037 0.00 0.00 38.84 3.46
1162 1204 8.402472 CCTATTATGAGCTAGGAGTATCGAAAG 58.598 40.741 0.00 0.00 37.31 2.62
1163 1205 7.768807 ATTATGAGCTAGGAGTATCGAAAGT 57.231 36.000 0.00 0.00 34.37 2.66
1164 1206 5.699097 ATGAGCTAGGAGTATCGAAAGTC 57.301 43.478 0.00 0.00 34.37 3.01
1165 1207 3.884091 TGAGCTAGGAGTATCGAAAGTCC 59.116 47.826 0.00 0.00 39.00 3.85
1167 1209 4.139038 AGCTAGGAGTATCGAAAGTCCTC 58.861 47.826 14.28 4.39 44.55 3.71
1168 1210 3.253921 GCTAGGAGTATCGAAAGTCCTCC 59.746 52.174 14.28 11.88 44.55 4.30
1169 1211 2.299521 AGGAGTATCGAAAGTCCTCCG 58.700 52.381 6.93 0.00 44.55 4.63
1170 1212 2.022934 GGAGTATCGAAAGTCCTCCGT 58.977 52.381 0.00 0.00 36.24 4.69
1171 1213 2.426381 GGAGTATCGAAAGTCCTCCGTT 59.574 50.000 0.00 0.00 36.24 4.44
1172 1214 3.629398 GGAGTATCGAAAGTCCTCCGTTA 59.371 47.826 0.00 0.00 36.24 3.18
1173 1215 4.497173 GGAGTATCGAAAGTCCTCCGTTAC 60.497 50.000 0.00 0.00 36.24 2.50
1174 1216 4.268359 AGTATCGAAAGTCCTCCGTTACT 58.732 43.478 0.00 0.00 35.37 2.24
1175 1217 4.704057 AGTATCGAAAGTCCTCCGTTACTT 59.296 41.667 0.00 0.00 36.19 2.24
1176 1218 3.565905 TCGAAAGTCCTCCGTTACTTC 57.434 47.619 0.00 0.00 34.91 3.01
1177 1219 3.152341 TCGAAAGTCCTCCGTTACTTCT 58.848 45.455 0.00 0.00 34.91 2.85
1178 1220 3.571401 TCGAAAGTCCTCCGTTACTTCTT 59.429 43.478 0.00 0.00 34.91 2.52
1179 1221 3.919197 CGAAAGTCCTCCGTTACTTCTTC 59.081 47.826 0.00 0.00 34.91 2.87
1180 1222 3.957591 AAGTCCTCCGTTACTTCTTCC 57.042 47.619 0.00 0.00 30.08 3.46
1181 1223 1.817447 AGTCCTCCGTTACTTCTTCCG 59.183 52.381 0.00 0.00 0.00 4.30
1182 1224 1.543358 GTCCTCCGTTACTTCTTCCGT 59.457 52.381 0.00 0.00 0.00 4.69
1183 1225 2.029560 GTCCTCCGTTACTTCTTCCGTT 60.030 50.000 0.00 0.00 0.00 4.44
1184 1226 2.629617 TCCTCCGTTACTTCTTCCGTTT 59.370 45.455 0.00 0.00 0.00 3.60
1185 1227 2.991866 CCTCCGTTACTTCTTCCGTTTC 59.008 50.000 0.00 0.00 0.00 2.78
1186 1228 3.553508 CCTCCGTTACTTCTTCCGTTTCA 60.554 47.826 0.00 0.00 0.00 2.69
1187 1229 4.053295 CTCCGTTACTTCTTCCGTTTCAA 58.947 43.478 0.00 0.00 0.00 2.69
1188 1230 4.440880 TCCGTTACTTCTTCCGTTTCAAA 58.559 39.130 0.00 0.00 0.00 2.69
1189 1231 4.874966 TCCGTTACTTCTTCCGTTTCAAAA 59.125 37.500 0.00 0.00 0.00 2.44
1190 1232 5.353678 TCCGTTACTTCTTCCGTTTCAAAAA 59.646 36.000 0.00 0.00 0.00 1.94
1246 1288 2.095461 GGCATCCTTCTTGGTTCTTCC 58.905 52.381 0.00 0.00 37.07 3.46
1252 1294 0.320421 TTCTTGGTTCTTCCTCGGCG 60.320 55.000 0.00 0.00 37.07 6.46
1340 1402 4.618227 GCCTGAATTGCCGAAATTGTAGTT 60.618 41.667 1.37 0.00 38.64 2.24
1344 1406 2.715737 TGCCGAAATTGTAGTTTGCC 57.284 45.000 0.00 0.00 0.00 4.52
1513 1575 1.537562 CCGATACGGCCTGTAAGTTCC 60.538 57.143 0.00 0.00 41.17 3.62
1516 1578 0.813184 TACGGCCTGTAAGTTCCTCG 59.187 55.000 0.00 0.00 0.00 4.63
1517 1579 1.183676 ACGGCCTGTAAGTTCCTCGT 61.184 55.000 0.00 0.00 0.00 4.18
1521 1583 1.672145 GCCTGTAAGTTCCTCGTCACC 60.672 57.143 0.00 0.00 0.00 4.02
1522 1584 1.616865 CCTGTAAGTTCCTCGTCACCA 59.383 52.381 0.00 0.00 0.00 4.17
1523 1585 2.609737 CCTGTAAGTTCCTCGTCACCAC 60.610 54.545 0.00 0.00 0.00 4.16
1536 1601 2.607282 CGTCACCACAGACTTCACTACC 60.607 54.545 0.00 0.00 36.38 3.18
1537 1602 1.611977 TCACCACAGACTTCACTACCG 59.388 52.381 0.00 0.00 0.00 4.02
1554 1619 1.068472 ACCGTACTTCAGAGTTCAGCG 60.068 52.381 0.00 0.00 37.33 5.18
1596 1672 0.100682 TATGTGAGCGACTCGAAGGC 59.899 55.000 1.63 0.00 32.35 4.35
1600 1676 1.590259 GAGCGACTCGAAGGCCATC 60.590 63.158 5.01 0.00 0.00 3.51
1610 1686 2.074113 GAAGGCCATCCATCCCCTCC 62.074 65.000 5.01 0.00 33.74 4.30
1620 1696 0.405585 CATCCCCTCCCTTGTGTTGT 59.594 55.000 0.00 0.00 0.00 3.32
1622 1698 0.401395 TCCCCTCCCTTGTGTTGTCT 60.401 55.000 0.00 0.00 0.00 3.41
1652 1728 0.104777 TCAGGATCATCAGGGAGGGG 60.105 60.000 0.00 0.00 0.00 4.79
1688 1764 1.860641 TCTACCAAGGCGAGATCCAA 58.139 50.000 0.00 0.00 0.00 3.53
1808 1884 0.176680 ACCTGGAGACTGCTTATGCG 59.823 55.000 0.00 0.00 43.34 4.73
1849 1925 2.355481 ACCGCGTCGTTCAGAACC 60.355 61.111 4.92 0.00 0.00 3.62
1931 2010 6.054295 AGGTTGTATCTAGTCTACGTACAGG 58.946 44.000 0.00 0.00 0.00 4.00
1968 2047 1.189403 CCGTCGTATTCTTCGTCTGC 58.811 55.000 0.00 0.00 0.00 4.26
1976 2055 6.034683 GTCGTATTCTTCGTCTGCAAATTACT 59.965 38.462 0.00 0.00 0.00 2.24
1977 2056 7.219535 GTCGTATTCTTCGTCTGCAAATTACTA 59.780 37.037 0.00 0.00 0.00 1.82
1986 2065 7.041721 TCGTCTGCAAATTACTATTCAGATGT 58.958 34.615 0.00 0.00 35.34 3.06
2034 2113 5.476599 AGTTGCCAAACTGCAGATAATGTAA 59.523 36.000 23.35 7.50 45.12 2.41
2093 2175 1.338020 GAAACACTGGTGAAGGGCAAG 59.662 52.381 7.78 0.00 29.26 4.01
2158 2243 4.322080 TGTTCAGCCTCATACGGATAAG 57.678 45.455 0.00 0.00 0.00 1.73
2192 2278 6.100279 TCTCTGCTATCAGGTGGATGTTTTAT 59.900 38.462 0.00 0.00 40.69 1.40
2281 2370 5.403766 GCATATGAACCTCAATCAGTCGTAG 59.596 44.000 6.97 0.00 0.00 3.51
2314 2403 5.072040 ACTGTTTTACTGCTTGTTGCTTT 57.928 34.783 0.00 0.00 43.37 3.51
2337 2426 3.438360 GTTGAATTAGCATTTGAGGGCG 58.562 45.455 0.00 0.00 34.54 6.13
2361 2450 2.439156 GCCATTTCCAGCGCTCCT 60.439 61.111 7.13 0.00 0.00 3.69
2433 2522 1.032114 CAGGGATGCCGGTTTCCTTC 61.032 60.000 20.03 8.31 32.34 3.46
2472 2561 1.613630 GCCCCTCCACTTCTCTGGA 60.614 63.158 0.00 0.00 38.05 3.86
2629 2719 7.554835 TGCTAGGAAGAAACTAGTTCAAACAAA 59.445 33.333 8.95 0.00 40.01 2.83
2656 2746 4.668289 ACGAAAACATGCGAAGAAAGTTT 58.332 34.783 0.00 0.00 34.19 2.66
2715 2808 6.952773 ACTTTAAAGCATTACACCACTTCA 57.047 33.333 15.24 0.00 0.00 3.02
2753 2846 4.323417 TCTTGGTGGTTACTATGCACAAG 58.677 43.478 0.00 0.00 36.37 3.16
2783 2876 6.411376 TCACACTGTCCAAAGAAAACTAGAA 58.589 36.000 0.00 0.00 0.00 2.10
2790 2883 6.921857 TGTCCAAAGAAAACTAGAAGTACTCG 59.078 38.462 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.484889 GAGTTTGAGCTTCTTGTCCGT 58.515 47.619 0.00 0.00 0.00 4.69
1 2 1.457303 CGAGTTTGAGCTTCTTGTCCG 59.543 52.381 0.00 0.00 0.00 4.79
2 3 2.755650 TCGAGTTTGAGCTTCTTGTCC 58.244 47.619 0.00 0.00 0.00 4.02
3 4 4.051922 TCTTCGAGTTTGAGCTTCTTGTC 58.948 43.478 0.00 0.00 0.00 3.18
4 5 4.054671 CTCTTCGAGTTTGAGCTTCTTGT 58.945 43.478 0.00 0.00 0.00 3.16
5 6 4.302455 TCTCTTCGAGTTTGAGCTTCTTG 58.698 43.478 0.00 0.00 0.00 3.02
6 7 4.555262 CTCTCTTCGAGTTTGAGCTTCTT 58.445 43.478 0.00 0.00 34.95 2.52
7 8 3.056891 CCTCTCTTCGAGTTTGAGCTTCT 60.057 47.826 0.00 0.00 38.11 2.85
8 9 3.057174 TCCTCTCTTCGAGTTTGAGCTTC 60.057 47.826 0.00 0.00 38.11 3.86
9 10 2.894126 TCCTCTCTTCGAGTTTGAGCTT 59.106 45.455 0.00 0.00 38.11 3.74
10 11 2.491693 CTCCTCTCTTCGAGTTTGAGCT 59.508 50.000 0.00 0.00 38.11 4.09
11 12 2.490115 TCTCCTCTCTTCGAGTTTGAGC 59.510 50.000 0.00 0.00 38.11 4.26
12 13 4.481463 GTTCTCCTCTCTTCGAGTTTGAG 58.519 47.826 0.00 0.00 38.11 3.02
13 14 3.256136 GGTTCTCCTCTCTTCGAGTTTGA 59.744 47.826 0.00 0.00 38.11 2.69
14 15 3.005897 TGGTTCTCCTCTCTTCGAGTTTG 59.994 47.826 0.00 0.00 38.11 2.93
15 16 3.231818 TGGTTCTCCTCTCTTCGAGTTT 58.768 45.455 0.00 0.00 38.11 2.66
16 17 2.877866 TGGTTCTCCTCTCTTCGAGTT 58.122 47.619 0.00 0.00 38.11 3.01
17 18 2.588464 TGGTTCTCCTCTCTTCGAGT 57.412 50.000 0.00 0.00 38.11 4.18
18 19 3.020274 TCATGGTTCTCCTCTCTTCGAG 58.980 50.000 0.00 0.00 39.57 4.04
19 20 3.087370 TCATGGTTCTCCTCTCTTCGA 57.913 47.619 0.00 0.00 34.23 3.71
20 21 3.549827 CGATCATGGTTCTCCTCTCTTCG 60.550 52.174 0.00 0.00 34.23 3.79
21 22 3.634448 TCGATCATGGTTCTCCTCTCTTC 59.366 47.826 0.00 0.00 34.23 2.87
22 23 3.636679 TCGATCATGGTTCTCCTCTCTT 58.363 45.455 0.00 0.00 34.23 2.85
23 24 3.304911 TCGATCATGGTTCTCCTCTCT 57.695 47.619 0.00 0.00 34.23 3.10
24 25 4.599047 ATTCGATCATGGTTCTCCTCTC 57.401 45.455 0.00 0.00 34.23 3.20
25 26 5.389520 TCTATTCGATCATGGTTCTCCTCT 58.610 41.667 0.00 0.00 34.23 3.69
26 27 5.336372 CCTCTATTCGATCATGGTTCTCCTC 60.336 48.000 0.00 0.00 34.23 3.71
27 28 4.526262 CCTCTATTCGATCATGGTTCTCCT 59.474 45.833 0.00 0.00 34.23 3.69
28 29 4.524714 TCCTCTATTCGATCATGGTTCTCC 59.475 45.833 0.00 0.00 0.00 3.71
29 30 5.713792 TCCTCTATTCGATCATGGTTCTC 57.286 43.478 0.00 0.00 0.00 2.87
30 31 5.011533 CCTTCCTCTATTCGATCATGGTTCT 59.988 44.000 0.00 0.00 0.00 3.01
31 32 5.221541 ACCTTCCTCTATTCGATCATGGTTC 60.222 44.000 0.00 0.00 0.00 3.62
32 33 4.656112 ACCTTCCTCTATTCGATCATGGTT 59.344 41.667 0.00 0.00 0.00 3.67
33 34 4.227197 ACCTTCCTCTATTCGATCATGGT 58.773 43.478 0.00 0.00 0.00 3.55
34 35 4.881019 ACCTTCCTCTATTCGATCATGG 57.119 45.455 0.00 0.00 0.00 3.66
35 36 4.450419 GCAACCTTCCTCTATTCGATCATG 59.550 45.833 0.00 0.00 0.00 3.07
36 37 4.636249 GCAACCTTCCTCTATTCGATCAT 58.364 43.478 0.00 0.00 0.00 2.45
37 38 3.490933 CGCAACCTTCCTCTATTCGATCA 60.491 47.826 0.00 0.00 0.00 2.92
38 39 3.053455 CGCAACCTTCCTCTATTCGATC 58.947 50.000 0.00 0.00 0.00 3.69
39 40 2.803492 GCGCAACCTTCCTCTATTCGAT 60.803 50.000 0.30 0.00 0.00 3.59
40 41 1.470979 GCGCAACCTTCCTCTATTCGA 60.471 52.381 0.30 0.00 0.00 3.71
41 42 0.931005 GCGCAACCTTCCTCTATTCG 59.069 55.000 0.30 0.00 0.00 3.34
42 43 2.205911 GAGCGCAACCTTCCTCTATTC 58.794 52.381 11.47 0.00 0.00 1.75
43 44 1.471676 CGAGCGCAACCTTCCTCTATT 60.472 52.381 11.47 0.00 0.00 1.73
44 45 0.103208 CGAGCGCAACCTTCCTCTAT 59.897 55.000 11.47 0.00 0.00 1.98
45 46 0.963856 TCGAGCGCAACCTTCCTCTA 60.964 55.000 11.47 0.00 0.00 2.43
46 47 2.219325 CTCGAGCGCAACCTTCCTCT 62.219 60.000 11.47 0.00 0.00 3.69
47 48 1.807573 CTCGAGCGCAACCTTCCTC 60.808 63.158 11.47 0.00 0.00 3.71
48 49 2.262915 CTCGAGCGCAACCTTCCT 59.737 61.111 11.47 0.00 0.00 3.36
49 50 2.781595 TTCCTCGAGCGCAACCTTCC 62.782 60.000 11.47 0.00 0.00 3.46
50 51 0.949105 TTTCCTCGAGCGCAACCTTC 60.949 55.000 11.47 0.00 0.00 3.46
51 52 0.534203 TTTTCCTCGAGCGCAACCTT 60.534 50.000 11.47 0.00 0.00 3.50
52 53 0.951040 CTTTTCCTCGAGCGCAACCT 60.951 55.000 11.47 0.00 0.00 3.50
53 54 0.949105 TCTTTTCCTCGAGCGCAACC 60.949 55.000 11.47 0.00 0.00 3.77
54 55 0.865769 TTCTTTTCCTCGAGCGCAAC 59.134 50.000 11.47 1.68 0.00 4.17
55 56 1.148310 CTTCTTTTCCTCGAGCGCAA 58.852 50.000 11.47 0.00 0.00 4.85
56 57 0.670546 CCTTCTTTTCCTCGAGCGCA 60.671 55.000 11.47 0.00 0.00 6.09
57 58 0.670854 ACCTTCTTTTCCTCGAGCGC 60.671 55.000 6.99 0.00 0.00 5.92
58 59 1.071605 CACCTTCTTTTCCTCGAGCG 58.928 55.000 6.99 0.19 0.00 5.03
59 60 2.457366 TCACCTTCTTTTCCTCGAGC 57.543 50.000 6.99 0.00 0.00 5.03
60 61 4.258702 TCTTCACCTTCTTTTCCTCGAG 57.741 45.455 5.13 5.13 0.00 4.04
61 62 4.618460 CGATCTTCACCTTCTTTTCCTCGA 60.618 45.833 0.00 0.00 0.00 4.04
62 63 3.614616 CGATCTTCACCTTCTTTTCCTCG 59.385 47.826 0.00 0.00 0.00 4.63
63 64 3.372514 GCGATCTTCACCTTCTTTTCCTC 59.627 47.826 0.00 0.00 0.00 3.71
64 65 3.339141 GCGATCTTCACCTTCTTTTCCT 58.661 45.455 0.00 0.00 0.00 3.36
65 66 2.420372 GGCGATCTTCACCTTCTTTTCC 59.580 50.000 0.00 0.00 0.00 3.13
66 67 2.094417 CGGCGATCTTCACCTTCTTTTC 59.906 50.000 0.00 0.00 0.00 2.29
67 68 2.076863 CGGCGATCTTCACCTTCTTTT 58.923 47.619 0.00 0.00 0.00 2.27
68 69 1.726853 CGGCGATCTTCACCTTCTTT 58.273 50.000 0.00 0.00 0.00 2.52
69 70 0.741221 GCGGCGATCTTCACCTTCTT 60.741 55.000 12.98 0.00 0.00 2.52
70 71 1.153549 GCGGCGATCTTCACCTTCT 60.154 57.895 12.98 0.00 0.00 2.85
71 72 2.174319 GGCGGCGATCTTCACCTTC 61.174 63.158 12.98 0.00 0.00 3.46
72 73 2.125106 GGCGGCGATCTTCACCTT 60.125 61.111 12.98 0.00 0.00 3.50
73 74 2.257409 ATTGGCGGCGATCTTCACCT 62.257 55.000 12.98 0.00 0.00 4.00
74 75 1.819632 ATTGGCGGCGATCTTCACC 60.820 57.895 12.98 0.00 0.00 4.02
75 76 1.353103 CATTGGCGGCGATCTTCAC 59.647 57.895 12.98 0.00 0.00 3.18
76 77 2.472059 GCATTGGCGGCGATCTTCA 61.472 57.895 12.98 0.00 0.00 3.02
77 78 2.329339 GCATTGGCGGCGATCTTC 59.671 61.111 12.98 0.00 0.00 2.87
94 95 1.134367 TCAACATCTTAGCGTCCTCCG 59.866 52.381 0.00 0.00 40.40 4.63
95 96 2.094182 TGTCAACATCTTAGCGTCCTCC 60.094 50.000 0.00 0.00 0.00 4.30
96 97 3.232213 TGTCAACATCTTAGCGTCCTC 57.768 47.619 0.00 0.00 0.00 3.71
97 98 3.895232 ATGTCAACATCTTAGCGTCCT 57.105 42.857 0.00 0.00 28.78 3.85
98 99 3.932710 TCAATGTCAACATCTTAGCGTCC 59.067 43.478 0.00 0.00 35.10 4.79
99 100 5.530519 TTCAATGTCAACATCTTAGCGTC 57.469 39.130 0.00 0.00 35.10 5.19
100 101 5.412594 ACATTCAATGTCAACATCTTAGCGT 59.587 36.000 0.00 0.00 39.92 5.07
101 102 5.735892 CACATTCAATGTCAACATCTTAGCG 59.264 40.000 0.00 0.00 42.70 4.26
102 103 6.032094 CCACATTCAATGTCAACATCTTAGC 58.968 40.000 0.00 0.00 42.70 3.09
103 104 7.381766 TCCACATTCAATGTCAACATCTTAG 57.618 36.000 0.00 0.00 42.70 2.18
104 105 7.757941 TTCCACATTCAATGTCAACATCTTA 57.242 32.000 0.00 0.00 42.70 2.10
105 106 6.653526 TTCCACATTCAATGTCAACATCTT 57.346 33.333 0.00 0.00 42.70 2.40
106 107 6.662234 AGATTCCACATTCAATGTCAACATCT 59.338 34.615 0.00 3.03 42.70 2.90
107 108 6.860080 AGATTCCACATTCAATGTCAACATC 58.140 36.000 0.00 0.76 42.70 3.06
108 109 6.845758 AGATTCCACATTCAATGTCAACAT 57.154 33.333 0.00 0.00 42.70 2.71
109 110 6.653526 AAGATTCCACATTCAATGTCAACA 57.346 33.333 0.00 0.00 42.70 3.33
110 111 6.366877 CCAAAGATTCCACATTCAATGTCAAC 59.633 38.462 0.00 0.00 42.70 3.18
111 112 6.267242 TCCAAAGATTCCACATTCAATGTCAA 59.733 34.615 0.00 0.00 42.70 3.18
112 113 5.774184 TCCAAAGATTCCACATTCAATGTCA 59.226 36.000 0.00 0.00 42.70 3.58
113 114 6.271488 TCCAAAGATTCCACATTCAATGTC 57.729 37.500 0.00 0.00 42.70 3.06
114 115 6.636705 CATCCAAAGATTCCACATTCAATGT 58.363 36.000 0.00 0.00 46.22 2.71
115 116 5.522460 GCATCCAAAGATTCCACATTCAATG 59.478 40.000 0.00 0.00 0.00 2.82
116 117 5.395990 GGCATCCAAAGATTCCACATTCAAT 60.396 40.000 0.00 0.00 35.98 2.57
117 118 4.081531 GGCATCCAAAGATTCCACATTCAA 60.082 41.667 0.00 0.00 35.98 2.69
118 119 3.448301 GGCATCCAAAGATTCCACATTCA 59.552 43.478 0.00 0.00 35.98 2.57
119 120 3.489738 CGGCATCCAAAGATTCCACATTC 60.490 47.826 0.00 0.00 35.69 2.67
120 121 2.428171 CGGCATCCAAAGATTCCACATT 59.572 45.455 0.00 0.00 35.69 2.71
121 122 2.026641 CGGCATCCAAAGATTCCACAT 58.973 47.619 0.00 0.00 35.69 3.21
122 123 1.004161 TCGGCATCCAAAGATTCCACA 59.996 47.619 0.00 0.00 35.69 4.17
123 124 1.401905 GTCGGCATCCAAAGATTCCAC 59.598 52.381 0.00 0.00 35.69 4.02
124 125 1.750193 GTCGGCATCCAAAGATTCCA 58.250 50.000 0.00 0.00 35.69 3.53
125 126 0.657840 CGTCGGCATCCAAAGATTCC 59.342 55.000 0.00 0.00 32.87 3.01
126 127 0.028110 GCGTCGGCATCCAAAGATTC 59.972 55.000 0.00 0.00 39.62 2.52
127 128 0.676466 TGCGTCGGCATCCAAAGATT 60.676 50.000 0.00 0.00 46.21 2.40
128 129 1.078497 TGCGTCGGCATCCAAAGAT 60.078 52.632 0.00 0.00 46.21 2.40
129 130 2.345617 TGCGTCGGCATCCAAAGA 59.654 55.556 0.00 0.00 46.21 2.52
138 139 1.273887 CGATCATTCTTGCGTCGGC 59.726 57.895 0.00 0.00 40.52 5.54
139 140 0.298707 CACGATCATTCTTGCGTCGG 59.701 55.000 0.00 0.00 36.00 4.79
140 141 0.314578 GCACGATCATTCTTGCGTCG 60.315 55.000 0.00 0.00 37.38 5.12
141 142 0.721154 TGCACGATCATTCTTGCGTC 59.279 50.000 0.00 0.00 46.99 5.19
142 143 0.723414 CTGCACGATCATTCTTGCGT 59.277 50.000 0.00 0.00 46.99 5.24
143 144 0.588233 GCTGCACGATCATTCTTGCG 60.588 55.000 0.00 0.00 46.99 4.85
144 145 3.231222 GCTGCACGATCATTCTTGC 57.769 52.632 0.00 0.00 44.93 4.01
155 156 0.179189 GATTTTTCTCCCGCTGCACG 60.179 55.000 0.00 2.27 43.15 5.34
156 157 0.881118 TGATTTTTCTCCCGCTGCAC 59.119 50.000 0.00 0.00 0.00 4.57
157 158 1.167851 CTGATTTTTCTCCCGCTGCA 58.832 50.000 0.00 0.00 0.00 4.41
158 159 1.168714 ACTGATTTTTCTCCCGCTGC 58.831 50.000 0.00 0.00 0.00 5.25
159 160 2.095059 CCAACTGATTTTTCTCCCGCTG 60.095 50.000 0.00 0.00 0.00 5.18
160 161 2.162681 CCAACTGATTTTTCTCCCGCT 58.837 47.619 0.00 0.00 0.00 5.52
161 162 1.402852 GCCAACTGATTTTTCTCCCGC 60.403 52.381 0.00 0.00 0.00 6.13
162 163 1.135689 CGCCAACTGATTTTTCTCCCG 60.136 52.381 0.00 0.00 0.00 5.14
163 164 1.202348 CCGCCAACTGATTTTTCTCCC 59.798 52.381 0.00 0.00 0.00 4.30
164 165 1.402852 GCCGCCAACTGATTTTTCTCC 60.403 52.381 0.00 0.00 0.00 3.71
165 166 1.729149 CGCCGCCAACTGATTTTTCTC 60.729 52.381 0.00 0.00 0.00 2.87
166 167 0.240945 CGCCGCCAACTGATTTTTCT 59.759 50.000 0.00 0.00 0.00 2.52
167 168 0.732538 CCGCCGCCAACTGATTTTTC 60.733 55.000 0.00 0.00 0.00 2.29
168 169 1.288752 CCGCCGCCAACTGATTTTT 59.711 52.632 0.00 0.00 0.00 1.94
169 170 2.961768 CCGCCGCCAACTGATTTT 59.038 55.556 0.00 0.00 0.00 1.82
170 171 3.747976 GCCGCCGCCAACTGATTT 61.748 61.111 0.00 0.00 0.00 2.17
180 181 3.929948 CTCATTCTTCGCCGCCGC 61.930 66.667 0.00 0.00 0.00 6.53
181 182 2.978452 ATCCTCATTCTTCGCCGCCG 62.978 60.000 0.00 0.00 0.00 6.46
182 183 1.227674 ATCCTCATTCTTCGCCGCC 60.228 57.895 0.00 0.00 0.00 6.13
183 184 1.937391 CATCCTCATTCTTCGCCGC 59.063 57.895 0.00 0.00 0.00 6.53
184 185 1.825285 CGCATCCTCATTCTTCGCCG 61.825 60.000 0.00 0.00 0.00 6.46
185 186 1.502163 CCGCATCCTCATTCTTCGCC 61.502 60.000 0.00 0.00 0.00 5.54
186 187 1.937391 CCGCATCCTCATTCTTCGC 59.063 57.895 0.00 0.00 0.00 4.70
187 188 1.825285 CGCCGCATCCTCATTCTTCG 61.825 60.000 0.00 0.00 0.00 3.79
188 189 0.530650 TCGCCGCATCCTCATTCTTC 60.531 55.000 0.00 0.00 0.00 2.87
189 190 0.107703 TTCGCCGCATCCTCATTCTT 60.108 50.000 0.00 0.00 0.00 2.52
190 191 0.531532 CTTCGCCGCATCCTCATTCT 60.532 55.000 0.00 0.00 0.00 2.40
191 192 1.502163 CCTTCGCCGCATCCTCATTC 61.502 60.000 0.00 0.00 0.00 2.67
192 193 1.524621 CCTTCGCCGCATCCTCATT 60.525 57.895 0.00 0.00 0.00 2.57
193 194 2.109799 CCTTCGCCGCATCCTCAT 59.890 61.111 0.00 0.00 0.00 2.90
194 195 4.838152 GCCTTCGCCGCATCCTCA 62.838 66.667 0.00 0.00 0.00 3.86
204 205 4.856607 CTCCTCCGTCGCCTTCGC 62.857 72.222 0.00 0.00 35.26 4.70
205 206 4.194720 CCTCCTCCGTCGCCTTCG 62.195 72.222 0.00 0.00 0.00 3.79
206 207 2.128507 ATCCTCCTCCGTCGCCTTC 61.129 63.158 0.00 0.00 0.00 3.46
207 208 2.042843 ATCCTCCTCCGTCGCCTT 60.043 61.111 0.00 0.00 0.00 4.35
208 209 2.835431 CATCCTCCTCCGTCGCCT 60.835 66.667 0.00 0.00 0.00 5.52
209 210 3.917760 CCATCCTCCTCCGTCGCC 61.918 72.222 0.00 0.00 0.00 5.54
210 211 3.917760 CCCATCCTCCTCCGTCGC 61.918 72.222 0.00 0.00 0.00 5.19
211 212 1.739338 CTTCCCATCCTCCTCCGTCG 61.739 65.000 0.00 0.00 0.00 5.12
212 213 1.403687 CCTTCCCATCCTCCTCCGTC 61.404 65.000 0.00 0.00 0.00 4.79
213 214 1.383248 CCTTCCCATCCTCCTCCGT 60.383 63.158 0.00 0.00 0.00 4.69
214 215 0.983378 AACCTTCCCATCCTCCTCCG 60.983 60.000 0.00 0.00 0.00 4.63
215 216 0.548510 CAACCTTCCCATCCTCCTCC 59.451 60.000 0.00 0.00 0.00 4.30
216 217 1.065126 CACAACCTTCCCATCCTCCTC 60.065 57.143 0.00 0.00 0.00 3.71
217 218 0.995024 CACAACCTTCCCATCCTCCT 59.005 55.000 0.00 0.00 0.00 3.69
218 219 0.698818 ACACAACCTTCCCATCCTCC 59.301 55.000 0.00 0.00 0.00 4.30
219 220 3.545703 CATACACAACCTTCCCATCCTC 58.454 50.000 0.00 0.00 0.00 3.71
220 221 2.357154 GCATACACAACCTTCCCATCCT 60.357 50.000 0.00 0.00 0.00 3.24
221 222 2.024414 GCATACACAACCTTCCCATCC 58.976 52.381 0.00 0.00 0.00 3.51
222 223 1.670811 CGCATACACAACCTTCCCATC 59.329 52.381 0.00 0.00 0.00 3.51
223 224 1.681780 CCGCATACACAACCTTCCCAT 60.682 52.381 0.00 0.00 0.00 4.00
224 225 0.322098 CCGCATACACAACCTTCCCA 60.322 55.000 0.00 0.00 0.00 4.37
225 226 1.654023 GCCGCATACACAACCTTCCC 61.654 60.000 0.00 0.00 0.00 3.97
226 227 1.800681 GCCGCATACACAACCTTCC 59.199 57.895 0.00 0.00 0.00 3.46
227 228 1.423845 CGCCGCATACACAACCTTC 59.576 57.895 0.00 0.00 0.00 3.46
228 229 2.038269 CCGCCGCATACACAACCTT 61.038 57.895 0.00 0.00 0.00 3.50
229 230 2.435938 CCGCCGCATACACAACCT 60.436 61.111 0.00 0.00 0.00 3.50
230 231 4.174129 GCCGCCGCATACACAACC 62.174 66.667 0.00 0.00 34.03 3.77
231 232 4.514569 CGCCGCCGCATACACAAC 62.515 66.667 0.00 0.00 34.03 3.32
249 250 4.980805 TCAAGGTGCCGTCGCCAC 62.981 66.667 0.00 0.00 45.27 5.01
250 251 3.950794 GATCAAGGTGCCGTCGCCA 62.951 63.158 0.00 0.00 45.27 5.69
251 252 3.195698 GATCAAGGTGCCGTCGCC 61.196 66.667 0.00 0.00 43.19 5.54
252 253 3.554692 CGATCAAGGTGCCGTCGC 61.555 66.667 0.00 0.00 0.00 5.19
253 254 2.885644 CCGATCAAGGTGCCGTCG 60.886 66.667 0.00 0.00 0.00 5.12
254 255 2.511600 CCCGATCAAGGTGCCGTC 60.512 66.667 0.00 0.00 0.00 4.79
255 256 2.521958 CTTCCCGATCAAGGTGCCGT 62.522 60.000 0.00 0.00 0.00 5.68
256 257 1.815421 CTTCCCGATCAAGGTGCCG 60.815 63.158 0.00 0.00 0.00 5.69
257 258 2.115291 GCTTCCCGATCAAGGTGCC 61.115 63.158 0.00 0.00 0.00 5.01
258 259 1.377202 TGCTTCCCGATCAAGGTGC 60.377 57.895 0.00 3.50 0.00 5.01
259 260 0.321564 TGTGCTTCCCGATCAAGGTG 60.322 55.000 0.00 0.00 0.00 4.00
260 261 0.620556 ATGTGCTTCCCGATCAAGGT 59.379 50.000 0.00 0.00 0.00 3.50
261 262 1.019673 CATGTGCTTCCCGATCAAGG 58.980 55.000 0.00 0.00 0.00 3.61
262 263 1.019673 CCATGTGCTTCCCGATCAAG 58.980 55.000 0.00 0.00 0.00 3.02
263 264 1.031571 GCCATGTGCTTCCCGATCAA 61.032 55.000 0.00 0.00 36.87 2.57
264 265 1.451927 GCCATGTGCTTCCCGATCA 60.452 57.895 0.00 0.00 36.87 2.92
265 266 3.425422 GCCATGTGCTTCCCGATC 58.575 61.111 0.00 0.00 36.87 3.69
274 275 2.056223 AGCAATCCCAGCCATGTGC 61.056 57.895 0.00 0.00 41.71 4.57
275 276 1.672854 CCAGCAATCCCAGCCATGTG 61.673 60.000 0.00 0.00 0.00 3.21
276 277 1.380785 CCAGCAATCCCAGCCATGT 60.381 57.895 0.00 0.00 0.00 3.21
277 278 1.380785 ACCAGCAATCCCAGCCATG 60.381 57.895 0.00 0.00 0.00 3.66
278 279 1.076485 GACCAGCAATCCCAGCCAT 60.076 57.895 0.00 0.00 0.00 4.40
279 280 2.356278 GACCAGCAATCCCAGCCA 59.644 61.111 0.00 0.00 0.00 4.75
280 281 2.440980 GGACCAGCAATCCCAGCC 60.441 66.667 0.00 0.00 0.00 4.85
281 282 2.615227 ATCGGACCAGCAATCCCAGC 62.615 60.000 0.00 0.00 31.99 4.85
282 283 0.758734 TATCGGACCAGCAATCCCAG 59.241 55.000 0.00 0.00 31.99 4.45
283 284 0.758734 CTATCGGACCAGCAATCCCA 59.241 55.000 0.00 0.00 31.99 4.37
284 285 1.001406 CTCTATCGGACCAGCAATCCC 59.999 57.143 0.00 0.00 31.99 3.85
285 286 1.606737 GCTCTATCGGACCAGCAATCC 60.607 57.143 0.00 0.00 0.00 3.01
286 287 1.069204 TGCTCTATCGGACCAGCAATC 59.931 52.381 1.09 0.00 0.00 2.67
287 288 1.069823 CTGCTCTATCGGACCAGCAAT 59.930 52.381 5.10 0.00 0.00 3.56
288 289 0.461548 CTGCTCTATCGGACCAGCAA 59.538 55.000 5.10 0.00 0.00 3.91
289 290 0.395724 TCTGCTCTATCGGACCAGCA 60.396 55.000 3.64 3.64 30.02 4.41
290 291 0.747255 TTCTGCTCTATCGGACCAGC 59.253 55.000 0.00 0.00 30.02 4.85
291 292 3.526931 TTTTCTGCTCTATCGGACCAG 57.473 47.619 0.00 0.00 0.00 4.00
292 293 4.487714 AATTTTCTGCTCTATCGGACCA 57.512 40.909 0.00 0.00 0.00 4.02
293 294 5.234543 GTGTAATTTTCTGCTCTATCGGACC 59.765 44.000 0.00 0.00 0.00 4.46
294 295 5.051641 CGTGTAATTTTCTGCTCTATCGGAC 60.052 44.000 0.00 0.00 0.00 4.79
295 296 5.041287 CGTGTAATTTTCTGCTCTATCGGA 58.959 41.667 0.00 0.00 0.00 4.55
296 297 4.209288 CCGTGTAATTTTCTGCTCTATCGG 59.791 45.833 0.00 0.00 0.00 4.18
297 298 5.041287 TCCGTGTAATTTTCTGCTCTATCG 58.959 41.667 0.00 0.00 0.00 2.92
298 299 7.484035 AATCCGTGTAATTTTCTGCTCTATC 57.516 36.000 0.00 0.00 0.00 2.08
299 300 7.441458 GGTAATCCGTGTAATTTTCTGCTCTAT 59.559 37.037 0.00 0.00 0.00 1.98
300 301 6.759827 GGTAATCCGTGTAATTTTCTGCTCTA 59.240 38.462 0.00 0.00 0.00 2.43
301 302 5.585047 GGTAATCCGTGTAATTTTCTGCTCT 59.415 40.000 0.00 0.00 0.00 4.09
302 303 5.807344 GGTAATCCGTGTAATTTTCTGCTC 58.193 41.667 0.00 0.00 0.00 4.26
303 304 5.813080 GGTAATCCGTGTAATTTTCTGCT 57.187 39.130 0.00 0.00 0.00 4.24
318 319 6.451064 AAAAGAACATCAATCCGGTAATCC 57.549 37.500 0.00 0.00 0.00 3.01
319 320 8.433421 TCTAAAAGAACATCAATCCGGTAATC 57.567 34.615 0.00 0.00 0.00 1.75
320 321 8.980481 ATCTAAAAGAACATCAATCCGGTAAT 57.020 30.769 0.00 0.00 0.00 1.89
321 322 8.801882 AATCTAAAAGAACATCAATCCGGTAA 57.198 30.769 0.00 0.00 0.00 2.85
322 323 7.223971 CGAATCTAAAAGAACATCAATCCGGTA 59.776 37.037 0.00 0.00 0.00 4.02
323 324 6.037172 CGAATCTAAAAGAACATCAATCCGGT 59.963 38.462 0.00 0.00 0.00 5.28
324 325 6.422223 CGAATCTAAAAGAACATCAATCCGG 58.578 40.000 0.00 0.00 0.00 5.14
325 326 6.257849 TCCGAATCTAAAAGAACATCAATCCG 59.742 38.462 0.00 0.00 0.00 4.18
326 327 7.065803 TGTCCGAATCTAAAAGAACATCAATCC 59.934 37.037 0.00 0.00 0.00 3.01
327 328 7.974675 TGTCCGAATCTAAAAGAACATCAATC 58.025 34.615 0.00 0.00 0.00 2.67
328 329 7.921786 TGTCCGAATCTAAAAGAACATCAAT 57.078 32.000 0.00 0.00 0.00 2.57
329 330 7.390440 ACATGTCCGAATCTAAAAGAACATCAA 59.610 33.333 0.00 0.00 0.00 2.57
330 331 6.878923 ACATGTCCGAATCTAAAAGAACATCA 59.121 34.615 0.00 0.00 0.00 3.07
331 332 7.308782 ACATGTCCGAATCTAAAAGAACATC 57.691 36.000 0.00 0.00 0.00 3.06
332 333 8.786826 TTACATGTCCGAATCTAAAAGAACAT 57.213 30.769 0.00 0.00 0.00 2.71
333 334 8.610248 TTTACATGTCCGAATCTAAAAGAACA 57.390 30.769 0.00 0.00 0.00 3.18
334 335 9.543018 CTTTTACATGTCCGAATCTAAAAGAAC 57.457 33.333 16.07 0.00 34.95 3.01
335 336 9.496873 TCTTTTACATGTCCGAATCTAAAAGAA 57.503 29.630 19.28 8.92 37.31 2.52
336 337 9.667107 ATCTTTTACATGTCCGAATCTAAAAGA 57.333 29.630 21.89 21.89 41.19 2.52
341 342 9.878667 TGTTTATCTTTTACATGTCCGAATCTA 57.121 29.630 0.00 0.00 0.00 1.98
342 343 8.786826 TGTTTATCTTTTACATGTCCGAATCT 57.213 30.769 0.00 0.00 0.00 2.40
345 346 9.661563 AGTATGTTTATCTTTTACATGTCCGAA 57.338 29.630 0.00 0.00 34.55 4.30
346 347 9.661563 AAGTATGTTTATCTTTTACATGTCCGA 57.338 29.630 0.00 0.00 34.55 4.55
347 348 9.702726 CAAGTATGTTTATCTTTTACATGTCCG 57.297 33.333 0.00 0.00 34.55 4.79
378 379 4.460263 AGCATGCCCGATCACTATAAAAA 58.540 39.130 15.66 0.00 0.00 1.94
379 380 4.085357 AGCATGCCCGATCACTATAAAA 57.915 40.909 15.66 0.00 0.00 1.52
380 381 3.769739 AGCATGCCCGATCACTATAAA 57.230 42.857 15.66 0.00 0.00 1.40
381 382 4.440112 CGATAGCATGCCCGATCACTATAA 60.440 45.833 15.66 0.00 0.00 0.98
382 383 3.066760 CGATAGCATGCCCGATCACTATA 59.933 47.826 15.66 0.00 0.00 1.31
383 384 2.159184 CGATAGCATGCCCGATCACTAT 60.159 50.000 15.66 2.55 0.00 2.12
384 385 1.202348 CGATAGCATGCCCGATCACTA 59.798 52.381 15.66 0.00 0.00 2.74
385 386 0.037882 CGATAGCATGCCCGATCACT 60.038 55.000 15.66 0.00 0.00 3.41
386 387 0.038251 TCGATAGCATGCCCGATCAC 60.038 55.000 15.66 0.00 0.00 3.06
387 388 0.038251 GTCGATAGCATGCCCGATCA 60.038 55.000 23.63 10.16 33.47 2.92
388 389 1.073216 CGTCGATAGCATGCCCGATC 61.073 60.000 23.63 18.23 33.47 3.69
389 390 1.080501 CGTCGATAGCATGCCCGAT 60.081 57.895 23.63 12.58 33.47 4.18
390 391 2.335011 CGTCGATAGCATGCCCGA 59.665 61.111 15.66 17.81 0.00 5.14
391 392 3.406361 GCGTCGATAGCATGCCCG 61.406 66.667 15.66 15.70 34.19 6.13
392 393 3.406361 CGCGTCGATAGCATGCCC 61.406 66.667 15.66 2.97 34.19 5.36
393 394 1.734477 ATCGCGTCGATAGCATGCC 60.734 57.895 15.66 0.00 45.13 4.40
394 395 1.278172 ACATCGCGTCGATAGCATGC 61.278 55.000 10.51 10.51 45.19 4.06
395 396 0.432361 CACATCGCGTCGATAGCATG 59.568 55.000 5.77 16.35 45.19 4.06
396 397 0.030773 ACACATCGCGTCGATAGCAT 59.969 50.000 5.77 6.01 45.19 3.79
397 398 0.865639 CACACATCGCGTCGATAGCA 60.866 55.000 5.77 4.23 45.19 3.49
398 399 1.540607 CCACACATCGCGTCGATAGC 61.541 60.000 5.77 5.86 45.19 2.97
399 400 0.028902 TCCACACATCGCGTCGATAG 59.971 55.000 5.77 11.39 45.19 2.08
400 401 0.666374 ATCCACACATCGCGTCGATA 59.334 50.000 5.77 0.00 45.19 2.92
402 403 1.226575 GATCCACACATCGCGTCGA 60.227 57.895 5.77 4.51 41.13 4.20
403 404 2.568031 CGATCCACACATCGCGTCG 61.568 63.158 5.77 0.00 39.32 5.12
404 405 2.230940 CCGATCCACACATCGCGTC 61.231 63.158 5.77 0.00 43.66 5.19
405 406 2.202743 CCGATCCACACATCGCGT 60.203 61.111 5.77 0.00 43.66 6.01
406 407 1.946156 CTCCGATCCACACATCGCG 60.946 63.158 0.00 0.00 43.66 5.87
407 408 0.384309 TACTCCGATCCACACATCGC 59.616 55.000 0.00 0.00 43.66 4.58
408 409 2.863401 TTACTCCGATCCACACATCG 57.137 50.000 0.00 0.00 44.45 3.84
409 410 7.548196 TTAAATTTACTCCGATCCACACATC 57.452 36.000 0.00 0.00 0.00 3.06
410 411 7.931578 TTTAAATTTACTCCGATCCACACAT 57.068 32.000 0.00 0.00 0.00 3.21
411 412 7.931578 ATTTAAATTTACTCCGATCCACACA 57.068 32.000 0.00 0.00 0.00 3.72
457 458 9.692749 GAGACCGTCATTCAATGTTATTCTATA 57.307 33.333 0.40 0.00 0.00 1.31
458 459 7.382488 CGAGACCGTCATTCAATGTTATTCTAT 59.618 37.037 0.40 0.00 0.00 1.98
459 460 6.695713 CGAGACCGTCATTCAATGTTATTCTA 59.304 38.462 0.40 0.00 0.00 2.10
460 461 5.520288 CGAGACCGTCATTCAATGTTATTCT 59.480 40.000 0.40 0.00 0.00 2.40
461 462 5.728255 CGAGACCGTCATTCAATGTTATTC 58.272 41.667 0.40 0.00 0.00 1.75
462 463 4.034048 GCGAGACCGTCATTCAATGTTATT 59.966 41.667 0.40 0.00 38.24 1.40
463 464 3.555956 GCGAGACCGTCATTCAATGTTAT 59.444 43.478 0.40 0.00 38.24 1.89
464 465 2.927477 GCGAGACCGTCATTCAATGTTA 59.073 45.455 0.40 0.00 38.24 2.41
465 466 1.732259 GCGAGACCGTCATTCAATGTT 59.268 47.619 0.40 0.00 38.24 2.71
466 467 1.359848 GCGAGACCGTCATTCAATGT 58.640 50.000 0.40 0.00 38.24 2.71
467 468 0.298707 CGCGAGACCGTCATTCAATG 59.701 55.000 0.00 0.00 38.24 2.82
468 469 0.108804 ACGCGAGACCGTCATTCAAT 60.109 50.000 15.93 0.00 36.61 2.57
469 470 0.319211 AACGCGAGACCGTCATTCAA 60.319 50.000 15.93 0.00 41.16 2.69
470 471 0.731514 GAACGCGAGACCGTCATTCA 60.732 55.000 15.93 0.00 41.16 2.57
471 472 0.731514 TGAACGCGAGACCGTCATTC 60.732 55.000 15.93 2.82 41.16 2.67
472 473 0.108804 ATGAACGCGAGACCGTCATT 60.109 50.000 15.93 0.00 41.16 2.57
473 474 0.802222 CATGAACGCGAGACCGTCAT 60.802 55.000 15.93 8.60 41.16 3.06
474 475 1.443702 CATGAACGCGAGACCGTCA 60.444 57.895 15.93 6.47 41.16 4.35
475 476 2.789203 GCATGAACGCGAGACCGTC 61.789 63.158 15.93 0.19 41.16 4.79
476 477 2.809601 GCATGAACGCGAGACCGT 60.810 61.111 15.93 0.00 44.41 4.83
477 478 3.554692 GGCATGAACGCGAGACCG 61.555 66.667 15.93 0.00 39.16 4.79
478 479 3.195698 GGGCATGAACGCGAGACC 61.196 66.667 15.93 4.57 0.00 3.85
479 480 1.696832 GAAGGGCATGAACGCGAGAC 61.697 60.000 15.93 3.83 0.00 3.36
480 481 1.447838 GAAGGGCATGAACGCGAGA 60.448 57.895 15.93 0.00 0.00 4.04
481 482 2.464459 GGAAGGGCATGAACGCGAG 61.464 63.158 15.93 0.00 0.00 5.03
482 483 2.435938 GGAAGGGCATGAACGCGA 60.436 61.111 15.93 0.00 0.00 5.87
483 484 2.745884 TGGAAGGGCATGAACGCG 60.746 61.111 3.53 3.53 0.00 6.01
484 485 0.749454 ATCTGGAAGGGCATGAACGC 60.749 55.000 0.00 0.00 0.00 4.84
485 486 2.620251 TATCTGGAAGGGCATGAACG 57.380 50.000 0.00 0.00 0.00 3.95
486 487 5.127682 ACAAATTATCTGGAAGGGCATGAAC 59.872 40.000 0.00 0.00 0.00 3.18
487 488 5.127519 CACAAATTATCTGGAAGGGCATGAA 59.872 40.000 0.00 0.00 0.00 2.57
488 489 4.646040 CACAAATTATCTGGAAGGGCATGA 59.354 41.667 0.00 0.00 0.00 3.07
489 490 4.202182 CCACAAATTATCTGGAAGGGCATG 60.202 45.833 0.00 0.00 0.00 4.06
490 491 3.962718 CCACAAATTATCTGGAAGGGCAT 59.037 43.478 0.00 0.00 0.00 4.40
491 492 3.011144 TCCACAAATTATCTGGAAGGGCA 59.989 43.478 0.00 0.00 30.81 5.36
492 493 3.631250 TCCACAAATTATCTGGAAGGGC 58.369 45.455 0.00 0.00 30.81 5.19
493 494 5.452356 GCAATCCACAAATTATCTGGAAGGG 60.452 44.000 3.45 0.00 37.62 3.95
494 495 5.127519 TGCAATCCACAAATTATCTGGAAGG 59.872 40.000 3.45 1.40 37.62 3.46
495 496 6.211587 TGCAATCCACAAATTATCTGGAAG 57.788 37.500 3.45 1.96 37.62 3.46
496 497 6.795144 ATGCAATCCACAAATTATCTGGAA 57.205 33.333 0.00 0.00 37.62 3.53
497 498 6.795144 AATGCAATCCACAAATTATCTGGA 57.205 33.333 0.00 2.09 38.47 3.86
498 499 6.259167 CCAAATGCAATCCACAAATTATCTGG 59.741 38.462 0.00 0.00 0.00 3.86
499 500 7.042950 TCCAAATGCAATCCACAAATTATCTG 58.957 34.615 0.00 0.00 0.00 2.90
500 501 7.124599 TCTCCAAATGCAATCCACAAATTATCT 59.875 33.333 0.00 0.00 0.00 1.98
501 502 7.267128 TCTCCAAATGCAATCCACAAATTATC 58.733 34.615 0.00 0.00 0.00 1.75
502 503 7.185318 TCTCCAAATGCAATCCACAAATTAT 57.815 32.000 0.00 0.00 0.00 1.28
503 504 6.602410 TCTCCAAATGCAATCCACAAATTA 57.398 33.333 0.00 0.00 0.00 1.40
504 505 5.486735 TCTCCAAATGCAATCCACAAATT 57.513 34.783 0.00 0.00 0.00 1.82
505 506 5.687166 ATCTCCAAATGCAATCCACAAAT 57.313 34.783 0.00 0.00 0.00 2.32
506 507 5.486735 AATCTCCAAATGCAATCCACAAA 57.513 34.783 0.00 0.00 0.00 2.83
507 508 5.105392 GGTAATCTCCAAATGCAATCCACAA 60.105 40.000 0.00 0.00 0.00 3.33
508 509 4.402155 GGTAATCTCCAAATGCAATCCACA 59.598 41.667 0.00 0.00 0.00 4.17
509 510 4.498009 CGGTAATCTCCAAATGCAATCCAC 60.498 45.833 0.00 0.00 0.00 4.02
510 511 3.631686 CGGTAATCTCCAAATGCAATCCA 59.368 43.478 0.00 0.00 0.00 3.41
511 512 3.632145 ACGGTAATCTCCAAATGCAATCC 59.368 43.478 0.00 0.00 0.00 3.01
512 513 4.498009 CCACGGTAATCTCCAAATGCAATC 60.498 45.833 0.00 0.00 0.00 2.67
513 514 3.381272 CCACGGTAATCTCCAAATGCAAT 59.619 43.478 0.00 0.00 0.00 3.56
514 515 2.752354 CCACGGTAATCTCCAAATGCAA 59.248 45.455 0.00 0.00 0.00 4.08
515 516 2.026729 TCCACGGTAATCTCCAAATGCA 60.027 45.455 0.00 0.00 0.00 3.96
516 517 2.639065 TCCACGGTAATCTCCAAATGC 58.361 47.619 0.00 0.00 0.00 3.56
517 518 4.513442 TCTTCCACGGTAATCTCCAAATG 58.487 43.478 0.00 0.00 0.00 2.32
518 519 4.837093 TCTTCCACGGTAATCTCCAAAT 57.163 40.909 0.00 0.00 0.00 2.32
519 520 4.627284 TTCTTCCACGGTAATCTCCAAA 57.373 40.909 0.00 0.00 0.00 3.28
520 521 4.627284 TTTCTTCCACGGTAATCTCCAA 57.373 40.909 0.00 0.00 0.00 3.53
521 522 4.627284 TTTTCTTCCACGGTAATCTCCA 57.373 40.909 0.00 0.00 0.00 3.86
543 544 0.668535 GACTGGCTTGCTCGGTTTTT 59.331 50.000 0.00 0.00 0.00 1.94
544 545 1.507141 CGACTGGCTTGCTCGGTTTT 61.507 55.000 0.00 0.00 0.00 2.43
545 546 1.961277 CGACTGGCTTGCTCGGTTT 60.961 57.895 0.00 0.00 0.00 3.27
577 583 4.626081 GTGTGCCACCACCGCTCT 62.626 66.667 0.00 0.00 41.35 4.09
732 738 4.394712 GGTGTCCCTGGCGGTCAG 62.395 72.222 1.75 1.75 43.00 3.51
796 802 4.394712 AAAGCAGAGACGGCCGGG 62.395 66.667 31.76 14.07 0.00 5.73
797 803 1.945354 TAGAAAGCAGAGACGGCCGG 61.945 60.000 31.76 12.50 0.00 6.13
799 805 0.533032 AGTAGAAAGCAGAGACGGCC 59.467 55.000 0.00 0.00 0.00 6.13
800 806 2.163815 TGTAGTAGAAAGCAGAGACGGC 59.836 50.000 0.00 0.00 0.00 5.68
801 807 3.728268 CGTGTAGTAGAAAGCAGAGACGG 60.728 52.174 0.00 0.00 0.00 4.79
809 818 1.136500 CCTCCCCGTGTAGTAGAAAGC 59.864 57.143 0.00 0.00 0.00 3.51
816 825 2.038490 GGTCCCTCCCCGTGTAGT 59.962 66.667 0.00 0.00 0.00 2.73
817 826 3.145551 CGGTCCCTCCCCGTGTAG 61.146 72.222 0.00 0.00 40.59 2.74
945 981 3.295462 CGCGACGACGACGATGAC 61.295 66.667 22.94 4.61 42.66 3.06
999 1038 2.821366 CCTGGCAGCACGTCCATC 60.821 66.667 9.56 0.00 0.00 3.51
1014 1053 1.130054 TCTTGAAGCACAGCTCCCCT 61.130 55.000 0.00 0.00 38.25 4.79
1100 1139 5.485209 AGAAGTAACGGAGGAGTTTGATT 57.515 39.130 0.00 0.00 35.70 2.57
1131 1173 9.196139 GATACTCCTAGCTCATAATAGGATGTT 57.804 37.037 1.11 0.00 45.05 2.71
1144 1186 4.139038 AGGACTTTCGATACTCCTAGCTC 58.861 47.826 0.00 0.00 30.91 4.09
1150 1192 2.022934 ACGGAGGACTTTCGATACTCC 58.977 52.381 5.78 5.78 43.29 3.85
1151 1193 3.779271 AACGGAGGACTTTCGATACTC 57.221 47.619 0.00 0.00 0.00 2.59
1152 1194 4.268359 AGTAACGGAGGACTTTCGATACT 58.732 43.478 2.79 2.79 37.56 2.12
1153 1195 4.629251 AGTAACGGAGGACTTTCGATAC 57.371 45.455 0.00 0.00 34.11 2.24
1154 1196 4.946157 AGAAGTAACGGAGGACTTTCGATA 59.054 41.667 0.00 0.00 37.81 2.92
1155 1197 3.762823 AGAAGTAACGGAGGACTTTCGAT 59.237 43.478 0.00 0.00 37.81 3.59
1156 1198 3.152341 AGAAGTAACGGAGGACTTTCGA 58.848 45.455 0.00 0.00 37.81 3.71
1157 1199 3.572604 AGAAGTAACGGAGGACTTTCG 57.427 47.619 0.00 0.00 37.81 3.46
1158 1200 4.244066 GGAAGAAGTAACGGAGGACTTTC 58.756 47.826 0.00 0.00 37.81 2.62
1159 1201 3.305881 CGGAAGAAGTAACGGAGGACTTT 60.306 47.826 0.00 0.00 37.81 2.66
1160 1202 2.230750 CGGAAGAAGTAACGGAGGACTT 59.769 50.000 0.00 0.00 39.86 3.01
1161 1203 1.817447 CGGAAGAAGTAACGGAGGACT 59.183 52.381 0.00 0.00 0.00 3.85
1162 1204 1.543358 ACGGAAGAAGTAACGGAGGAC 59.457 52.381 0.00 0.00 0.00 3.85
1163 1205 1.915141 ACGGAAGAAGTAACGGAGGA 58.085 50.000 0.00 0.00 0.00 3.71
1164 1206 2.738013 AACGGAAGAAGTAACGGAGG 57.262 50.000 0.00 0.00 0.00 4.30
1165 1207 3.645884 TGAAACGGAAGAAGTAACGGAG 58.354 45.455 0.00 0.00 0.00 4.63
1166 1208 3.731652 TGAAACGGAAGAAGTAACGGA 57.268 42.857 0.00 0.00 0.00 4.69
1167 1209 4.799419 TTTGAAACGGAAGAAGTAACGG 57.201 40.909 0.00 0.00 0.00 4.44
1192 1234 2.640316 AGCAACGGAGGACTCTTTTT 57.360 45.000 0.00 0.00 0.00 1.94
1193 1235 2.104963 AGAAGCAACGGAGGACTCTTTT 59.895 45.455 0.00 0.00 0.00 2.27
1194 1236 1.694696 AGAAGCAACGGAGGACTCTTT 59.305 47.619 0.00 0.00 0.00 2.52
1197 1239 3.190874 CATAAGAAGCAACGGAGGACTC 58.809 50.000 0.00 0.00 0.00 3.36
1252 1294 4.262079 CCATGATAAGGAGTAACGGAGACC 60.262 50.000 0.00 0.00 0.00 3.85
1329 1389 4.226761 CACTTCCGGCAAACTACAATTTC 58.773 43.478 0.00 0.00 0.00 2.17
1330 1390 3.005367 CCACTTCCGGCAAACTACAATTT 59.995 43.478 0.00 0.00 0.00 1.82
1333 1393 1.141254 TCCACTTCCGGCAAACTACAA 59.859 47.619 0.00 0.00 0.00 2.41
1340 1402 2.975799 GCGTTCCACTTCCGGCAA 60.976 61.111 0.00 0.00 0.00 4.52
1344 1406 1.952133 TCAACGCGTTCCACTTCCG 60.952 57.895 23.92 8.51 0.00 4.30
1395 1457 4.087892 CGCTCCCCACCTGTCCTG 62.088 72.222 0.00 0.00 0.00 3.86
1513 1575 1.338337 AGTGAAGTCTGTGGTGACGAG 59.662 52.381 0.00 0.00 41.47 4.18
1516 1578 2.607282 CGGTAGTGAAGTCTGTGGTGAC 60.607 54.545 0.00 0.00 37.23 3.67
1517 1579 1.611977 CGGTAGTGAAGTCTGTGGTGA 59.388 52.381 0.00 0.00 0.00 4.02
1521 1583 4.023450 TGAAGTACGGTAGTGAAGTCTGTG 60.023 45.833 0.00 0.00 0.00 3.66
1522 1584 4.139786 TGAAGTACGGTAGTGAAGTCTGT 58.860 43.478 0.00 0.00 0.00 3.41
1523 1585 4.454847 TCTGAAGTACGGTAGTGAAGTCTG 59.545 45.833 0.00 0.00 0.00 3.51
1536 1601 2.333389 ACGCTGAACTCTGAAGTACG 57.667 50.000 0.00 0.00 33.48 3.67
1537 1602 3.172824 GCTACGCTGAACTCTGAAGTAC 58.827 50.000 0.00 0.00 33.48 2.73
1554 1619 5.579718 ACTACACTCATTCACGTATGCTAC 58.420 41.667 0.00 0.00 0.00 3.58
1567 1632 3.948473 AGTCGCTCACATACTACACTCAT 59.052 43.478 0.00 0.00 0.00 2.90
1596 1672 0.995675 ACAAGGGAGGGGATGGATGG 60.996 60.000 0.00 0.00 0.00 3.51
1600 1676 0.323725 CAACACAAGGGAGGGGATGG 60.324 60.000 0.00 0.00 0.00 3.51
1610 1686 1.609208 CCCTGGAAGACAACACAAGG 58.391 55.000 0.00 0.00 34.07 3.61
1620 1696 2.822643 ATCCTGACGCCCCTGGAAGA 62.823 60.000 0.00 0.00 37.63 2.87
1622 1698 2.285368 ATCCTGACGCCCCTGGAA 60.285 61.111 0.00 0.00 37.63 3.53
1652 1728 5.121811 TGGTAGATCAGGTAGTAGTCGTTC 58.878 45.833 0.00 0.00 0.00 3.95
1688 1764 2.982130 CTCGTGCCCAGGTAGCTT 59.018 61.111 0.00 0.00 0.00 3.74
1849 1925 8.472683 TTTTACAGACATTTCAACAGTTTTGG 57.527 30.769 0.00 0.00 0.00 3.28
1931 2010 1.670811 CGGTGAAACACTATGGGATGC 59.329 52.381 0.00 0.00 39.98 3.91
1977 2056 9.965902 AGATTAGTAAAAGGTGAACATCTGAAT 57.034 29.630 0.00 0.00 0.00 2.57
1986 2065 7.719633 ACTGCAAGAAGATTAGTAAAAGGTGAA 59.280 33.333 0.00 0.00 37.43 3.18
2034 2113 6.642950 GCATAAGCGACTGAATAACTGTATCT 59.357 38.462 0.00 0.00 0.00 1.98
2079 2161 5.185635 TCATTAATTTCTTGCCCTTCACCAG 59.814 40.000 0.00 0.00 0.00 4.00
2093 2175 9.825972 TGAAAGACGATGAAACTCATTAATTTC 57.174 29.630 0.00 0.00 37.20 2.17
2158 2243 5.931146 CACCTGATAGCAGAGATTGGTTATC 59.069 44.000 10.19 0.00 45.17 1.75
2192 2278 2.094130 TGAATATGTACGTTCCGTGGCA 60.094 45.455 0.00 0.00 41.39 4.92
2203 2289 8.208718 TGACTAGTTGGCATTTGAATATGTAC 57.791 34.615 0.00 0.00 0.00 2.90
2281 2370 4.379499 GCAGTAAAACAGTCTTACCCATGC 60.379 45.833 0.00 0.00 30.88 4.06
2314 2403 3.195396 GCCCTCAAATGCTAATTCAACCA 59.805 43.478 0.00 0.00 0.00 3.67
2361 2450 1.345415 GGTGGGAACAAGACCTACGAA 59.655 52.381 0.00 0.00 46.06 3.85
2433 2522 3.490155 GCATGAGAGATGATGAACTGTCG 59.510 47.826 0.00 0.00 30.61 4.35
2481 2570 0.248825 CTGACAGATTCGAGAGCCGG 60.249 60.000 0.00 0.00 39.14 6.13
2563 2652 7.013655 ACCAGATTTCATACATATGTTGGCTTC 59.986 37.037 14.77 5.17 35.26 3.86
2597 2687 7.719633 TGAACTAGTTTCTTCCTAGCATGTTTT 59.280 33.333 10.02 0.00 36.23 2.43
2636 2726 6.956694 CGATAAACTTTCTTCGCATGTTTTC 58.043 36.000 0.00 0.00 33.63 2.29
2656 2746 3.424300 GCAGCCAGCATTGCGATA 58.576 55.556 2.38 0.00 44.79 2.92
2715 2808 6.840705 ACCACCAAGAATGCTAATATGGAAAT 59.159 34.615 0.00 0.00 0.00 2.17
2783 2876 6.802608 TCCAATATGAATTTCGTCGAGTACT 58.197 36.000 0.00 0.00 0.00 2.73
2790 2883 6.348213 CCGGGTTATCCAATATGAATTTCGTC 60.348 42.308 0.00 0.00 34.36 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.