Multiple sequence alignment - TraesCS6D01G240700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G240700 chr6D 100.000 2719 0 0 1 2719 343133394 343136112 0.000000e+00 5022
1 TraesCS6D01G240700 chr6D 89.683 126 11 2 2094 2219 287025890 287026013 2.800000e-35 159
2 TraesCS6D01G240700 chr6B 93.769 1300 48 12 824 2106 517751834 517753117 0.000000e+00 1921
3 TraesCS6D01G240700 chr6B 93.617 235 11 4 556 788 517751602 517751834 5.570000e-92 348
4 TraesCS6D01G240700 chr6A 90.267 935 45 16 1190 2102 483593676 483594586 0.000000e+00 1181
5 TraesCS6D01G240700 chr6A 87.625 501 41 14 1 493 483591271 483591758 1.830000e-156 562
6 TraesCS6D01G240700 chr6A 91.541 331 20 5 472 796 483591867 483592195 1.480000e-122 449
7 TraesCS6D01G240700 chr6A 92.657 286 17 2 795 1079 483593392 483593674 2.520000e-110 409
8 TraesCS6D01G240700 chr1D 85.294 442 64 1 2278 2719 420378878 420378438 3.190000e-124 455
9 TraesCS6D01G240700 chr5D 84.504 413 56 6 2311 2719 384881945 384882353 4.220000e-108 401
10 TraesCS6D01G240700 chr5D 92.373 118 8 1 2103 2220 138565671 138565555 1.670000e-37 167
11 TraesCS6D01G240700 chr5D 90.909 121 10 1 2101 2221 140016632 140016513 7.790000e-36 161
12 TraesCS6D01G240700 chr3B 82.960 446 73 3 2275 2719 628472744 628472301 1.520000e-107 399
13 TraesCS6D01G240700 chr4D 82.743 452 71 7 2272 2719 12710499 12710947 1.960000e-106 396
14 TraesCS6D01G240700 chr4D 84.518 394 55 5 2329 2719 62104576 62104966 4.250000e-103 385
15 TraesCS6D01G240700 chr5A 82.511 446 70 8 2278 2719 22613098 22612657 4.250000e-103 385
16 TraesCS6D01G240700 chr3D 84.439 392 60 1 2328 2719 516072903 516073293 4.250000e-103 385
17 TraesCS6D01G240700 chr2D 84.319 389 58 3 2328 2715 447342537 447342923 7.110000e-101 377
18 TraesCS6D01G240700 chr2D 89.062 128 12 2 2093 2220 622831201 622831326 1.010000e-34 158
19 TraesCS6D01G240700 chr2B 81.879 447 73 7 2275 2719 58781992 58781552 1.190000e-98 370
20 TraesCS6D01G240700 chr4A 90.476 126 10 2 2094 2219 506712658 506712535 6.020000e-37 165
21 TraesCS6D01G240700 chr2A 92.308 117 8 1 2103 2219 502330365 502330480 6.020000e-37 165
22 TraesCS6D01G240700 chr2A 90.000 130 10 3 2090 2219 634608898 634609024 6.020000e-37 165
23 TraesCS6D01G240700 chr2A 91.597 119 9 1 2103 2221 613004705 613004588 2.170000e-36 163
24 TraesCS6D01G240700 chr4B 88.889 126 12 2 2095 2219 34580028 34580152 1.300000e-33 154


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G240700 chr6D 343133394 343136112 2718 False 5022.00 5022 100.0000 1 2719 1 chr6D.!!$F2 2718
1 TraesCS6D01G240700 chr6B 517751602 517753117 1515 False 1134.50 1921 93.6930 556 2106 2 chr6B.!!$F1 1550
2 TraesCS6D01G240700 chr6A 483591271 483594586 3315 False 650.25 1181 90.5225 1 2102 4 chr6A.!!$F1 2101

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
207 214 0.31716 GGTCCATGTGTGTGAGACGA 59.683 55.0 0.0 0.0 0.0 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2206 3584 0.4546 TCTGCAATACTCCGTCCGTC 59.545 55.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 165 8.533569 AACAGAAAACAAGAGGAAAAATAGGA 57.466 30.769 0.00 0.00 0.00 2.94
159 166 8.171164 ACAGAAAACAAGAGGAAAAATAGGAG 57.829 34.615 0.00 0.00 0.00 3.69
160 167 7.998964 ACAGAAAACAAGAGGAAAAATAGGAGA 59.001 33.333 0.00 0.00 0.00 3.71
185 192 4.519540 AACATATCAAAGCGCTTTTGGT 57.480 36.364 31.88 23.01 45.05 3.67
207 214 0.317160 GGTCCATGTGTGTGAGACGA 59.683 55.000 0.00 0.00 0.00 4.20
216 223 0.667792 GTGTGAGACGAGGGTGAAGC 60.668 60.000 0.00 0.00 0.00 3.86
219 226 1.544691 GTGAGACGAGGGTGAAGCTAA 59.455 52.381 0.00 0.00 0.00 3.09
220 227 2.166664 GTGAGACGAGGGTGAAGCTAAT 59.833 50.000 0.00 0.00 0.00 1.73
221 228 2.427453 TGAGACGAGGGTGAAGCTAATC 59.573 50.000 0.00 0.00 0.00 1.75
222 229 2.691011 GAGACGAGGGTGAAGCTAATCT 59.309 50.000 0.00 0.00 0.00 2.40
223 230 2.691011 AGACGAGGGTGAAGCTAATCTC 59.309 50.000 0.00 0.00 0.00 2.75
224 231 2.691011 GACGAGGGTGAAGCTAATCTCT 59.309 50.000 0.00 0.00 0.00 3.10
225 232 3.884091 GACGAGGGTGAAGCTAATCTCTA 59.116 47.826 0.00 0.00 0.00 2.43
226 233 3.633065 ACGAGGGTGAAGCTAATCTCTAC 59.367 47.826 0.00 0.00 0.00 2.59
231 238 7.533289 AGGGTGAAGCTAATCTCTACTATTC 57.467 40.000 0.00 0.00 0.00 1.75
235 242 7.870445 GGTGAAGCTAATCTCTACTATTCAAGG 59.130 40.741 0.00 0.00 0.00 3.61
252 259 4.594970 TCAAGGAGAGTTTGTTGGTTTCA 58.405 39.130 0.00 0.00 0.00 2.69
263 270 6.605594 AGTTTGTTGGTTTCACTTTCATCCTA 59.394 34.615 0.00 0.00 0.00 2.94
288 295 2.167693 TCGATACATGTTCACTCCCACC 59.832 50.000 2.30 0.00 0.00 4.61
295 302 2.938838 TGTTCACTCCCACCGATTTTT 58.061 42.857 0.00 0.00 0.00 1.94
344 351 9.362151 TCATTAATATTTTCATAACTGACCCCC 57.638 33.333 0.00 0.00 0.00 5.40
346 353 9.722317 ATTAATATTTTCATAACTGACCCCCAA 57.278 29.630 0.00 0.00 0.00 4.12
347 354 9.722317 TTAATATTTTCATAACTGACCCCCAAT 57.278 29.630 0.00 0.00 0.00 3.16
348 355 7.839680 ATATTTTCATAACTGACCCCCAATC 57.160 36.000 0.00 0.00 0.00 2.67
349 356 4.946160 TTTCATAACTGACCCCCAATCT 57.054 40.909 0.00 0.00 0.00 2.40
350 357 4.503714 TTCATAACTGACCCCCAATCTC 57.496 45.455 0.00 0.00 0.00 2.75
351 358 2.777692 TCATAACTGACCCCCAATCTCC 59.222 50.000 0.00 0.00 0.00 3.71
353 360 1.290134 AACTGACCCCCAATCTCCTC 58.710 55.000 0.00 0.00 0.00 3.71
354 361 0.978146 ACTGACCCCCAATCTCCTCG 60.978 60.000 0.00 0.00 0.00 4.63
355 362 0.978146 CTGACCCCCAATCTCCTCGT 60.978 60.000 0.00 0.00 0.00 4.18
360 367 2.092323 CCCCCAATCTCCTCGTTTTTC 58.908 52.381 0.00 0.00 0.00 2.29
371 378 6.062095 TCTCCTCGTTTTTCAGGAAAGAAAT 58.938 36.000 0.00 0.00 38.39 2.17
377 384 7.543756 TCGTTTTTCAGGAAAGAAATCACTTT 58.456 30.769 0.00 0.00 41.86 2.66
395 402 9.545105 AATCACTTTCAAAAGCAATCAACATAA 57.455 25.926 2.43 0.00 39.63 1.90
441 448 9.463443 ACATAAAATCTCTTGCAAGTAAACAAC 57.537 29.630 25.19 0.00 0.00 3.32
460 467 5.260140 ACAACAAAATCAACTCGTTGTACG 58.740 37.500 9.38 0.00 46.06 3.67
517 654 1.694150 TGCCTATGGATTCTCTTCCCG 59.306 52.381 0.00 0.00 34.67 5.14
529 666 1.207089 CTCTTCCCGCAATGTACCTCA 59.793 52.381 0.00 0.00 0.00 3.86
538 675 3.063997 CGCAATGTACCTCAATCTCAACC 59.936 47.826 0.00 0.00 0.00 3.77
635 778 8.830580 TCTTGAAATCTGAATAATAAAGAGGCG 58.169 33.333 0.00 0.00 0.00 5.52
656 799 1.956477 AGTCACACCCTGCATTTTGTC 59.044 47.619 0.00 0.00 0.00 3.18
764 907 2.093152 CACGTACGGCCAACAGATTAAC 59.907 50.000 21.06 0.00 0.00 2.01
770 913 2.420022 CGGCCAACAGATTAACCAGAAG 59.580 50.000 2.24 0.00 0.00 2.85
772 915 3.561313 GGCCAACAGATTAACCAGAAGGA 60.561 47.826 0.00 0.00 38.69 3.36
774 917 4.706962 GCCAACAGATTAACCAGAAGGAAT 59.293 41.667 0.00 0.00 38.69 3.01
776 919 6.624423 CCAACAGATTAACCAGAAGGAATTG 58.376 40.000 0.00 0.00 38.69 2.32
812 2153 2.159814 CGTCTCGCGTATACATCTCCTC 60.160 54.545 5.77 0.00 35.54 3.71
814 2155 2.067013 CTCGCGTATACATCTCCTCGA 58.933 52.381 5.77 0.00 0.00 4.04
818 2159 2.159626 GCGTATACATCTCCTCGAGCTC 60.160 54.545 6.99 2.73 0.00 4.09
872 2213 5.526479 TCTGCATCTTAATGTTCTCTCATGC 59.474 40.000 0.00 0.00 35.18 4.06
954 2296 1.605738 CCAGCCTGCAGCCTTCTTT 60.606 57.895 8.66 0.00 45.47 2.52
978 2320 2.125673 CACCAGGCCGTTCCTACG 60.126 66.667 0.00 0.00 45.52 3.51
1060 2402 0.527565 GAACGCCCTGTCCGTAAGTA 59.472 55.000 0.00 0.00 38.06 2.24
1138 2482 5.005012 TGCATCTAAACGTATTAGTTGACGC 59.995 40.000 20.55 14.71 42.81 5.19
1139 2483 5.231568 GCATCTAAACGTATTAGTTGACGCT 59.768 40.000 20.55 0.00 42.81 5.07
1142 2486 3.476295 AACGTATTAGTTGACGCTCGA 57.524 42.857 0.00 0.00 42.81 4.04
1143 2487 3.476295 ACGTATTAGTTGACGCTCGAA 57.524 42.857 0.00 0.00 42.81 3.71
1144 2488 4.025015 ACGTATTAGTTGACGCTCGAAT 57.975 40.909 0.00 0.00 42.81 3.34
1145 2489 4.033684 ACGTATTAGTTGACGCTCGAATC 58.966 43.478 0.00 0.00 42.81 2.52
1146 2490 3.421231 CGTATTAGTTGACGCTCGAATCC 59.579 47.826 0.00 0.00 31.49 3.01
1147 2491 3.520290 ATTAGTTGACGCTCGAATCCA 57.480 42.857 0.00 0.00 0.00 3.41
1148 2492 3.520290 TTAGTTGACGCTCGAATCCAT 57.480 42.857 0.00 0.00 0.00 3.41
1149 2493 2.386661 AGTTGACGCTCGAATCCATT 57.613 45.000 0.00 0.00 0.00 3.16
1150 2494 2.699954 AGTTGACGCTCGAATCCATTT 58.300 42.857 0.00 0.00 0.00 2.32
1151 2495 2.416547 AGTTGACGCTCGAATCCATTTG 59.583 45.455 0.00 0.00 0.00 2.32
1152 2496 2.378445 TGACGCTCGAATCCATTTGA 57.622 45.000 0.00 0.00 0.00 2.69
1153 2497 2.270923 TGACGCTCGAATCCATTTGAG 58.729 47.619 11.04 11.04 46.46 3.02
1170 2514 6.404074 CCATTTGAGCTCAACTAATTCCAGAC 60.404 42.308 28.46 0.00 35.28 3.51
1186 2530 3.053095 TCCAGACGGAGGGAGTATTACTT 60.053 47.826 0.00 0.00 35.91 2.24
1409 2770 2.740055 GCAGGAGTGAGCACGGTG 60.740 66.667 3.15 3.15 36.20 4.94
1439 2800 1.069090 GGACACGCAGAAGGTGACA 59.931 57.895 0.00 0.00 38.73 3.58
1552 2913 1.330521 GTACTACCCGTTCGCGATACA 59.669 52.381 10.88 0.00 44.71 2.29
1748 3109 6.806739 CCATTCCTCCGAAAGAAATTTACAAC 59.193 38.462 0.00 0.00 0.00 3.32
1751 3112 6.731164 TCCTCCGAAAGAAATTTACAACAAC 58.269 36.000 0.00 0.00 0.00 3.32
1892 3268 4.340894 GATGCTGTTTTACATCGCAGAA 57.659 40.909 0.00 0.00 43.58 3.02
2088 3465 4.431416 TCATAAGGGTGGCACGAATATT 57.569 40.909 12.17 4.31 0.00 1.28
2113 3491 8.627208 TTTCGTTATCTATATACTCCCTTCGT 57.373 34.615 0.00 0.00 0.00 3.85
2114 3492 7.840342 TCGTTATCTATATACTCCCTTCGTC 57.160 40.000 0.00 0.00 0.00 4.20
2115 3493 6.820656 TCGTTATCTATATACTCCCTTCGTCC 59.179 42.308 0.00 0.00 0.00 4.79
2116 3494 6.238049 CGTTATCTATATACTCCCTTCGTCCG 60.238 46.154 0.00 0.00 0.00 4.79
2117 3495 3.947868 TCTATATACTCCCTTCGTCCGG 58.052 50.000 0.00 0.00 0.00 5.14
2118 3496 2.965671 ATATACTCCCTTCGTCCGGA 57.034 50.000 0.00 0.00 0.00 5.14
2119 3497 2.734755 TATACTCCCTTCGTCCGGAA 57.265 50.000 5.23 0.00 0.00 4.30
2120 3498 1.856629 ATACTCCCTTCGTCCGGAAA 58.143 50.000 5.23 0.00 33.34 3.13
2121 3499 1.856629 TACTCCCTTCGTCCGGAAAT 58.143 50.000 5.23 0.00 33.34 2.17
2122 3500 1.856629 ACTCCCTTCGTCCGGAAATA 58.143 50.000 5.23 0.00 33.34 1.40
2123 3501 1.479730 ACTCCCTTCGTCCGGAAATAC 59.520 52.381 5.23 0.00 33.34 1.89
2124 3502 1.755380 CTCCCTTCGTCCGGAAATACT 59.245 52.381 5.23 0.00 33.34 2.12
2125 3503 2.167900 CTCCCTTCGTCCGGAAATACTT 59.832 50.000 5.23 0.00 33.34 2.24
2126 3504 2.093869 TCCCTTCGTCCGGAAATACTTG 60.094 50.000 5.23 0.00 33.34 3.16
2127 3505 2.354403 CCCTTCGTCCGGAAATACTTGT 60.354 50.000 5.23 0.00 33.34 3.16
2128 3506 2.928116 CCTTCGTCCGGAAATACTTGTC 59.072 50.000 5.23 0.00 33.34 3.18
2129 3507 2.660189 TCGTCCGGAAATACTTGTCC 57.340 50.000 5.23 0.00 0.00 4.02
2130 3508 2.173519 TCGTCCGGAAATACTTGTCCT 58.826 47.619 5.23 0.00 0.00 3.85
2131 3509 2.094390 TCGTCCGGAAATACTTGTCCTG 60.094 50.000 5.23 0.00 0.00 3.86
2132 3510 2.094390 CGTCCGGAAATACTTGTCCTGA 60.094 50.000 5.23 0.00 0.00 3.86
2133 3511 3.615592 CGTCCGGAAATACTTGTCCTGAA 60.616 47.826 5.23 0.00 30.10 3.02
2134 3512 4.320870 GTCCGGAAATACTTGTCCTGAAA 58.679 43.478 5.23 0.00 30.10 2.69
2135 3513 4.758165 GTCCGGAAATACTTGTCCTGAAAA 59.242 41.667 5.23 0.00 30.10 2.29
2136 3514 5.414765 GTCCGGAAATACTTGTCCTGAAAAT 59.585 40.000 5.23 0.00 30.10 1.82
2137 3515 5.414454 TCCGGAAATACTTGTCCTGAAAATG 59.586 40.000 0.00 0.00 0.00 2.32
2138 3516 5.393027 CCGGAAATACTTGTCCTGAAAATGG 60.393 44.000 0.00 0.00 0.00 3.16
2139 3517 5.414454 CGGAAATACTTGTCCTGAAAATGGA 59.586 40.000 0.00 0.00 0.00 3.41
2140 3518 6.095440 CGGAAATACTTGTCCTGAAAATGGAT 59.905 38.462 0.00 0.00 35.87 3.41
2141 3519 7.282224 CGGAAATACTTGTCCTGAAAATGGATA 59.718 37.037 0.00 0.00 35.87 2.59
2142 3520 8.966868 GGAAATACTTGTCCTGAAAATGGATAA 58.033 33.333 0.00 0.00 35.87 1.75
2147 3525 7.614494 ACTTGTCCTGAAAATGGATAAAATGG 58.386 34.615 0.00 0.00 34.98 3.16
2148 3526 7.454380 ACTTGTCCTGAAAATGGATAAAATGGA 59.546 33.333 0.00 0.00 34.98 3.41
2149 3527 7.976414 TGTCCTGAAAATGGATAAAATGGAT 57.024 32.000 0.00 0.00 35.87 3.41
2150 3528 7.784037 TGTCCTGAAAATGGATAAAATGGATG 58.216 34.615 0.00 0.00 35.87 3.51
2151 3529 7.399765 TGTCCTGAAAATGGATAAAATGGATGT 59.600 33.333 0.00 0.00 35.87 3.06
2152 3530 8.912988 GTCCTGAAAATGGATAAAATGGATGTA 58.087 33.333 0.00 0.00 35.87 2.29
2153 3531 9.659135 TCCTGAAAATGGATAAAATGGATGTAT 57.341 29.630 0.00 0.00 0.00 2.29
2154 3532 9.918630 CCTGAAAATGGATAAAATGGATGTATC 57.081 33.333 0.00 0.00 0.00 2.24
2204 3582 8.357402 ACAACCATTTGTAGAACAAGTATTTCC 58.643 33.333 0.00 0.00 44.53 3.13
2205 3583 7.141100 ACCATTTGTAGAACAAGTATTTCCG 57.859 36.000 0.00 0.00 39.53 4.30
2206 3584 6.150474 ACCATTTGTAGAACAAGTATTTCCGG 59.850 38.462 0.00 0.00 39.53 5.14
2207 3585 6.373216 CCATTTGTAGAACAAGTATTTCCGGA 59.627 38.462 0.00 0.00 39.53 5.14
2208 3586 6.790285 TTTGTAGAACAAGTATTTCCGGAC 57.210 37.500 1.83 0.00 39.53 4.79
2209 3587 4.487948 TGTAGAACAAGTATTTCCGGACG 58.512 43.478 1.83 0.00 0.00 4.79
2210 3588 2.968675 AGAACAAGTATTTCCGGACGG 58.031 47.619 1.83 3.96 0.00 4.79
2211 3589 2.564062 AGAACAAGTATTTCCGGACGGA 59.436 45.455 1.83 9.76 43.52 4.69
2212 3590 2.375173 ACAAGTATTTCCGGACGGAC 57.625 50.000 13.76 1.52 45.11 4.79
2213 3591 1.274596 CAAGTATTTCCGGACGGACG 58.725 55.000 13.76 0.00 45.11 4.79
2232 3610 4.124851 ACGGAGTATTGCAGAGTTAAGG 57.875 45.455 0.00 0.00 41.94 2.69
2233 3611 2.866762 CGGAGTATTGCAGAGTTAAGGC 59.133 50.000 0.00 0.00 0.00 4.35
2234 3612 2.866762 GGAGTATTGCAGAGTTAAGGCG 59.133 50.000 0.00 0.00 0.00 5.52
2235 3613 3.522553 GAGTATTGCAGAGTTAAGGCGT 58.477 45.455 0.00 0.00 0.00 5.68
2236 3614 4.441079 GGAGTATTGCAGAGTTAAGGCGTA 60.441 45.833 0.00 0.00 0.00 4.42
2237 3615 4.683832 AGTATTGCAGAGTTAAGGCGTAG 58.316 43.478 0.00 0.00 0.00 3.51
2238 3616 3.887621 ATTGCAGAGTTAAGGCGTAGA 57.112 42.857 0.00 0.00 0.00 2.59
2239 3617 2.941453 TGCAGAGTTAAGGCGTAGAG 57.059 50.000 0.00 0.00 0.00 2.43
2240 3618 1.476891 TGCAGAGTTAAGGCGTAGAGG 59.523 52.381 0.00 0.00 0.00 3.69
2248 3626 2.501128 GGCGTAGAGGCAGATGCA 59.499 61.111 7.19 0.00 45.92 3.96
2249 3627 1.070445 GGCGTAGAGGCAGATGCAT 59.930 57.895 0.00 0.00 45.92 3.96
2250 3628 0.318441 GGCGTAGAGGCAGATGCATA 59.682 55.000 0.00 0.00 45.92 3.14
2251 3629 1.066573 GGCGTAGAGGCAGATGCATAT 60.067 52.381 0.00 0.00 45.92 1.78
2252 3630 2.166459 GGCGTAGAGGCAGATGCATATA 59.834 50.000 0.00 0.00 45.92 0.86
2253 3631 3.368427 GGCGTAGAGGCAGATGCATATAA 60.368 47.826 0.00 0.00 45.92 0.98
2254 3632 4.437239 GCGTAGAGGCAGATGCATATAAT 58.563 43.478 0.00 0.00 44.36 1.28
2255 3633 5.451937 GGCGTAGAGGCAGATGCATATAATA 60.452 44.000 0.00 0.00 45.92 0.98
2256 3634 5.460419 GCGTAGAGGCAGATGCATATAATAC 59.540 44.000 0.00 1.32 44.36 1.89
2257 3635 6.564328 CGTAGAGGCAGATGCATATAATACA 58.436 40.000 0.00 0.00 44.36 2.29
2258 3636 7.035612 CGTAGAGGCAGATGCATATAATACAA 58.964 38.462 0.00 0.00 44.36 2.41
2259 3637 7.221645 CGTAGAGGCAGATGCATATAATACAAG 59.778 40.741 0.00 0.00 44.36 3.16
2260 3638 6.413052 AGAGGCAGATGCATATAATACAAGG 58.587 40.000 0.00 0.00 44.36 3.61
2261 3639 6.214208 AGAGGCAGATGCATATAATACAAGGA 59.786 38.462 0.00 0.00 44.36 3.36
2262 3640 6.782986 AGGCAGATGCATATAATACAAGGAA 58.217 36.000 0.00 0.00 44.36 3.36
2263 3641 6.883217 AGGCAGATGCATATAATACAAGGAAG 59.117 38.462 0.00 0.00 44.36 3.46
2264 3642 6.881065 GGCAGATGCATATAATACAAGGAAGA 59.119 38.462 0.00 0.00 44.36 2.87
2265 3643 7.391554 GGCAGATGCATATAATACAAGGAAGAA 59.608 37.037 0.00 0.00 44.36 2.52
2266 3644 8.954350 GCAGATGCATATAATACAAGGAAGAAT 58.046 33.333 0.00 0.00 41.59 2.40
2282 3660 5.497474 GGAAGAATACAGTTCCTAAAGGCA 58.503 41.667 0.00 0.00 39.42 4.75
2283 3661 6.122964 GGAAGAATACAGTTCCTAAAGGCAT 58.877 40.000 0.00 0.00 39.42 4.40
2284 3662 6.261158 GGAAGAATACAGTTCCTAAAGGCATC 59.739 42.308 0.00 0.00 39.42 3.91
2285 3663 6.567602 AGAATACAGTTCCTAAAGGCATCT 57.432 37.500 0.00 0.00 34.44 2.90
2286 3664 6.587273 AGAATACAGTTCCTAAAGGCATCTC 58.413 40.000 0.00 0.00 34.44 2.75
2287 3665 3.636153 ACAGTTCCTAAAGGCATCTCC 57.364 47.619 0.00 0.00 34.44 3.71
2288 3666 2.912956 ACAGTTCCTAAAGGCATCTCCA 59.087 45.455 0.00 0.00 37.29 3.86
2289 3667 3.330701 ACAGTTCCTAAAGGCATCTCCAA 59.669 43.478 0.00 0.00 37.29 3.53
2290 3668 3.691609 CAGTTCCTAAAGGCATCTCCAAC 59.308 47.826 0.00 0.00 37.29 3.77
2291 3669 3.330701 AGTTCCTAAAGGCATCTCCAACA 59.669 43.478 0.00 0.00 37.29 3.33
2292 3670 3.350219 TCCTAAAGGCATCTCCAACAC 57.650 47.619 0.00 0.00 37.29 3.32
2293 3671 2.912956 TCCTAAAGGCATCTCCAACACT 59.087 45.455 0.00 0.00 37.29 3.55
2294 3672 3.012518 CCTAAAGGCATCTCCAACACTG 58.987 50.000 0.00 0.00 37.29 3.66
2295 3673 2.957402 AAAGGCATCTCCAACACTGA 57.043 45.000 0.00 0.00 37.29 3.41
2296 3674 2.191128 AAGGCATCTCCAACACTGAC 57.809 50.000 0.00 0.00 37.29 3.51
2297 3675 0.326264 AGGCATCTCCAACACTGACC 59.674 55.000 0.00 0.00 37.29 4.02
2298 3676 0.678048 GGCATCTCCAACACTGACCC 60.678 60.000 0.00 0.00 34.01 4.46
2299 3677 0.326264 GCATCTCCAACACTGACCCT 59.674 55.000 0.00 0.00 0.00 4.34
2300 3678 1.677217 GCATCTCCAACACTGACCCTC 60.677 57.143 0.00 0.00 0.00 4.30
2301 3679 1.905215 CATCTCCAACACTGACCCTCT 59.095 52.381 0.00 0.00 0.00 3.69
2302 3680 2.992847 TCTCCAACACTGACCCTCTA 57.007 50.000 0.00 0.00 0.00 2.43
2303 3681 3.254093 TCTCCAACACTGACCCTCTAA 57.746 47.619 0.00 0.00 0.00 2.10
2304 3682 3.165875 TCTCCAACACTGACCCTCTAAG 58.834 50.000 0.00 0.00 0.00 2.18
2305 3683 1.623811 TCCAACACTGACCCTCTAAGC 59.376 52.381 0.00 0.00 0.00 3.09
2306 3684 1.625818 CCAACACTGACCCTCTAAGCT 59.374 52.381 0.00 0.00 0.00 3.74
2307 3685 2.354203 CCAACACTGACCCTCTAAGCTC 60.354 54.545 0.00 0.00 0.00 4.09
2308 3686 1.562783 ACACTGACCCTCTAAGCTCC 58.437 55.000 0.00 0.00 0.00 4.70
2309 3687 0.457851 CACTGACCCTCTAAGCTCCG 59.542 60.000 0.00 0.00 0.00 4.63
2310 3688 0.039911 ACTGACCCTCTAAGCTCCGT 59.960 55.000 0.00 0.00 0.00 4.69
2311 3689 0.741915 CTGACCCTCTAAGCTCCGTC 59.258 60.000 0.00 0.00 0.00 4.79
2312 3690 0.039180 TGACCCTCTAAGCTCCGTCA 59.961 55.000 0.00 0.00 0.00 4.35
2313 3691 1.183549 GACCCTCTAAGCTCCGTCAA 58.816 55.000 0.00 0.00 0.00 3.18
2314 3692 0.896226 ACCCTCTAAGCTCCGTCAAC 59.104 55.000 0.00 0.00 0.00 3.18
2315 3693 1.187087 CCCTCTAAGCTCCGTCAACT 58.813 55.000 0.00 0.00 0.00 3.16
2316 3694 1.134965 CCCTCTAAGCTCCGTCAACTG 60.135 57.143 0.00 0.00 0.00 3.16
2317 3695 1.546476 CCTCTAAGCTCCGTCAACTGT 59.454 52.381 0.00 0.00 0.00 3.55
2318 3696 2.028930 CCTCTAAGCTCCGTCAACTGTT 60.029 50.000 0.00 0.00 0.00 3.16
2319 3697 3.246619 CTCTAAGCTCCGTCAACTGTTC 58.753 50.000 0.00 0.00 0.00 3.18
2320 3698 1.986378 CTAAGCTCCGTCAACTGTTCG 59.014 52.381 0.00 0.00 0.00 3.95
2321 3699 0.387929 AAGCTCCGTCAACTGTTCGA 59.612 50.000 3.53 0.00 0.00 3.71
2322 3700 0.387929 AGCTCCGTCAACTGTTCGAA 59.612 50.000 0.00 0.00 0.00 3.71
2323 3701 0.507358 GCTCCGTCAACTGTTCGAAC 59.493 55.000 21.42 21.42 0.00 3.95
2324 3702 1.137513 CTCCGTCAACTGTTCGAACC 58.862 55.000 24.78 7.79 0.00 3.62
2325 3703 0.460722 TCCGTCAACTGTTCGAACCA 59.539 50.000 24.78 12.22 0.00 3.67
2326 3704 1.069513 TCCGTCAACTGTTCGAACCAT 59.930 47.619 24.78 10.54 0.00 3.55
2327 3705 1.194547 CCGTCAACTGTTCGAACCATG 59.805 52.381 24.78 19.23 0.00 3.66
2328 3706 1.194547 CGTCAACTGTTCGAACCATGG 59.805 52.381 24.78 11.19 0.00 3.66
2329 3707 2.489971 GTCAACTGTTCGAACCATGGA 58.510 47.619 24.78 13.08 0.00 3.41
2330 3708 2.875933 GTCAACTGTTCGAACCATGGAA 59.124 45.455 24.78 4.74 0.00 3.53
2331 3709 3.058914 GTCAACTGTTCGAACCATGGAAG 60.059 47.826 24.78 16.20 0.00 3.46
2332 3710 2.878406 CAACTGTTCGAACCATGGAAGT 59.122 45.455 24.78 16.83 0.00 3.01
2333 3711 2.767505 ACTGTTCGAACCATGGAAGTC 58.232 47.619 24.78 11.52 0.00 3.01
2334 3712 2.104111 ACTGTTCGAACCATGGAAGTCA 59.896 45.455 24.78 8.61 0.00 3.41
2335 3713 3.244561 ACTGTTCGAACCATGGAAGTCAT 60.245 43.478 24.78 0.00 36.31 3.06
2336 3714 3.334691 TGTTCGAACCATGGAAGTCATC 58.665 45.455 24.78 5.63 32.92 2.92
2347 3725 1.017387 GAAGTCATCCAATGCGGTCC 58.983 55.000 0.00 0.00 35.57 4.46
2348 3726 0.620556 AAGTCATCCAATGCGGTCCT 59.379 50.000 0.00 0.00 35.57 3.85
2349 3727 0.107508 AGTCATCCAATGCGGTCCTG 60.108 55.000 0.00 0.00 35.57 3.86
2350 3728 0.392998 GTCATCCAATGCGGTCCTGT 60.393 55.000 0.00 0.00 35.57 4.00
2351 3729 1.134521 GTCATCCAATGCGGTCCTGTA 60.135 52.381 0.00 0.00 35.57 2.74
2352 3730 1.768275 TCATCCAATGCGGTCCTGTAT 59.232 47.619 0.00 0.00 35.57 2.29
2353 3731 2.146342 CATCCAATGCGGTCCTGTATC 58.854 52.381 0.00 0.00 35.57 2.24
2354 3732 0.104120 TCCAATGCGGTCCTGTATCG 59.896 55.000 0.00 0.00 35.57 2.92
2355 3733 0.880278 CCAATGCGGTCCTGTATCGG 60.880 60.000 0.00 0.00 30.14 4.18
2356 3734 0.179084 CAATGCGGTCCTGTATCGGT 60.179 55.000 0.00 0.00 30.14 4.69
2357 3735 0.104304 AATGCGGTCCTGTATCGGTC 59.896 55.000 0.00 0.00 30.14 4.79
2358 3736 1.745320 ATGCGGTCCTGTATCGGTCC 61.745 60.000 0.00 0.00 30.14 4.46
2359 3737 2.719979 CGGTCCTGTATCGGTCCG 59.280 66.667 4.39 4.39 46.19 4.79
2360 3738 2.117156 CGGTCCTGTATCGGTCCGT 61.117 63.158 11.88 1.23 46.23 4.69
2361 3739 1.436336 GGTCCTGTATCGGTCCGTG 59.564 63.158 11.88 0.00 0.00 4.94
2362 3740 1.436336 GTCCTGTATCGGTCCGTGG 59.564 63.158 11.88 7.33 0.00 4.94
2363 3741 2.106332 CCTGTATCGGTCCGTGGC 59.894 66.667 11.88 3.12 0.00 5.01
2364 3742 2.717044 CCTGTATCGGTCCGTGGCA 61.717 63.158 11.88 7.60 0.00 4.92
2365 3743 1.518572 CTGTATCGGTCCGTGGCAC 60.519 63.158 11.88 7.79 0.00 5.01
2366 3744 2.220615 CTGTATCGGTCCGTGGCACA 62.221 60.000 19.09 9.93 0.00 4.57
2367 3745 1.518572 GTATCGGTCCGTGGCACAG 60.519 63.158 19.09 6.46 41.80 3.66
2368 3746 1.980232 TATCGGTCCGTGGCACAGT 60.980 57.895 19.09 0.00 41.80 3.55
2369 3747 1.940883 TATCGGTCCGTGGCACAGTC 61.941 60.000 19.09 3.82 41.80 3.51
2370 3748 4.293648 CGGTCCGTGGCACAGTCA 62.294 66.667 19.09 0.00 41.80 3.41
2371 3749 2.357517 GGTCCGTGGCACAGTCAG 60.358 66.667 19.09 0.00 41.80 3.51
2372 3750 2.357517 GTCCGTGGCACAGTCAGG 60.358 66.667 19.09 10.27 41.80 3.86
2373 3751 2.523168 TCCGTGGCACAGTCAGGA 60.523 61.111 19.09 12.59 41.80 3.86
2374 3752 1.913262 TCCGTGGCACAGTCAGGAT 60.913 57.895 19.09 0.00 41.80 3.24
2375 3753 1.742880 CCGTGGCACAGTCAGGATG 60.743 63.158 19.09 0.00 41.80 3.51
2376 3754 2.393768 CGTGGCACAGTCAGGATGC 61.394 63.158 19.09 0.00 41.80 3.91
2377 3755 2.046988 TGGCACAGTCAGGATGCG 60.047 61.111 0.00 0.00 40.37 4.73
2378 3756 2.046892 GGCACAGTCAGGATGCGT 60.047 61.111 0.00 0.00 40.37 5.24
2379 3757 1.672356 GGCACAGTCAGGATGCGTT 60.672 57.895 0.00 0.00 40.37 4.84
2380 3758 1.237285 GGCACAGTCAGGATGCGTTT 61.237 55.000 0.00 0.00 40.37 3.60
2381 3759 0.593128 GCACAGTCAGGATGCGTTTT 59.407 50.000 0.00 0.00 34.76 2.43
2382 3760 1.400242 GCACAGTCAGGATGCGTTTTC 60.400 52.381 0.00 0.00 34.76 2.29
2383 3761 2.146342 CACAGTCAGGATGCGTTTTCT 58.854 47.619 0.00 0.00 34.76 2.52
2384 3762 2.158449 CACAGTCAGGATGCGTTTTCTC 59.842 50.000 0.00 0.00 34.76 2.87
2385 3763 1.734465 CAGTCAGGATGCGTTTTCTCC 59.266 52.381 0.00 0.00 34.76 3.71
2386 3764 0.721718 GTCAGGATGCGTTTTCTCCG 59.278 55.000 0.00 0.00 34.76 4.63
2387 3765 0.391130 TCAGGATGCGTTTTCTCCGG 60.391 55.000 0.00 0.00 34.76 5.14
2388 3766 1.745489 AGGATGCGTTTTCTCCGGC 60.745 57.895 0.00 0.00 34.13 6.13
2389 3767 2.038269 GGATGCGTTTTCTCCGGCA 61.038 57.895 0.00 0.00 40.06 5.69
2390 3768 1.582610 GGATGCGTTTTCTCCGGCAA 61.583 55.000 0.00 0.00 39.09 4.52
2391 3769 0.239879 GATGCGTTTTCTCCGGCAAA 59.760 50.000 0.00 0.00 39.09 3.68
2392 3770 0.039527 ATGCGTTTTCTCCGGCAAAC 60.040 50.000 0.00 5.11 39.09 2.93
2393 3771 1.371267 GCGTTTTCTCCGGCAAACC 60.371 57.895 14.51 1.92 30.37 3.27
2405 3783 2.793278 GGCAAACCGAAGACAAATGT 57.207 45.000 0.00 0.00 0.00 2.71
2406 3784 2.393764 GGCAAACCGAAGACAAATGTG 58.606 47.619 0.00 0.00 0.00 3.21
2407 3785 2.034053 GGCAAACCGAAGACAAATGTGA 59.966 45.455 0.00 0.00 0.00 3.58
2408 3786 3.300009 GCAAACCGAAGACAAATGTGAG 58.700 45.455 0.00 0.00 0.00 3.51
2409 3787 3.853307 GCAAACCGAAGACAAATGTGAGG 60.853 47.826 0.00 0.00 0.00 3.86
2410 3788 2.185004 ACCGAAGACAAATGTGAGGG 57.815 50.000 0.00 0.00 0.00 4.30
2411 3789 1.697432 ACCGAAGACAAATGTGAGGGA 59.303 47.619 0.00 0.00 0.00 4.20
2412 3790 2.289694 ACCGAAGACAAATGTGAGGGAG 60.290 50.000 0.00 0.00 0.00 4.30
2413 3791 2.350522 CGAAGACAAATGTGAGGGAGG 58.649 52.381 0.00 0.00 0.00 4.30
2414 3792 2.289694 CGAAGACAAATGTGAGGGAGGT 60.290 50.000 0.00 0.00 0.00 3.85
2415 3793 3.756117 GAAGACAAATGTGAGGGAGGTT 58.244 45.455 0.00 0.00 0.00 3.50
2416 3794 3.884037 AGACAAATGTGAGGGAGGTTT 57.116 42.857 0.00 0.00 0.00 3.27
2417 3795 3.490348 AGACAAATGTGAGGGAGGTTTG 58.510 45.455 0.00 0.00 36.23 2.93
2418 3796 1.963515 ACAAATGTGAGGGAGGTTTGC 59.036 47.619 0.00 0.00 34.12 3.68
2419 3797 1.068333 CAAATGTGAGGGAGGTTTGCG 60.068 52.381 0.00 0.00 0.00 4.85
2420 3798 0.609131 AATGTGAGGGAGGTTTGCGG 60.609 55.000 0.00 0.00 0.00 5.69
2421 3799 2.359975 GTGAGGGAGGTTTGCGGG 60.360 66.667 0.00 0.00 0.00 6.13
2422 3800 2.528127 TGAGGGAGGTTTGCGGGA 60.528 61.111 0.00 0.00 0.00 5.14
2423 3801 2.269241 GAGGGAGGTTTGCGGGAG 59.731 66.667 0.00 0.00 0.00 4.30
2424 3802 2.529389 AGGGAGGTTTGCGGGAGT 60.529 61.111 0.00 0.00 0.00 3.85
2425 3803 2.046217 GGGAGGTTTGCGGGAGTC 60.046 66.667 0.00 0.00 0.00 3.36
2426 3804 2.046217 GGAGGTTTGCGGGAGTCC 60.046 66.667 0.00 0.00 0.00 3.85
2438 3816 2.203451 GAGTCCGGGCCGATCCTA 60.203 66.667 30.79 3.96 34.39 2.94
2439 3817 1.831286 GAGTCCGGGCCGATCCTAA 60.831 63.158 30.79 1.97 34.39 2.69
2440 3818 1.807495 GAGTCCGGGCCGATCCTAAG 61.807 65.000 30.79 8.87 34.39 2.18
2441 3819 3.231736 TCCGGGCCGATCCTAAGC 61.232 66.667 30.79 0.00 34.39 3.09
2442 3820 4.315941 CCGGGCCGATCCTAAGCC 62.316 72.222 30.79 2.82 46.37 4.35
2445 3823 4.990553 GGCCGATCCTAAGCCCGC 62.991 72.222 0.00 0.00 41.00 6.13
2446 3824 3.930012 GCCGATCCTAAGCCCGCT 61.930 66.667 0.00 0.00 0.00 5.52
2447 3825 2.822399 CCGATCCTAAGCCCGCTT 59.178 61.111 7.19 7.19 39.83 4.68
2448 3826 1.301009 CCGATCCTAAGCCCGCTTC 60.301 63.158 4.96 0.00 37.47 3.86
2449 3827 1.742768 CGATCCTAAGCCCGCTTCT 59.257 57.895 4.96 0.00 37.47 2.85
2450 3828 0.598680 CGATCCTAAGCCCGCTTCTG 60.599 60.000 4.96 0.64 37.47 3.02
2451 3829 0.753262 GATCCTAAGCCCGCTTCTGA 59.247 55.000 4.96 4.39 37.47 3.27
2452 3830 0.466124 ATCCTAAGCCCGCTTCTGAC 59.534 55.000 4.96 0.00 37.47 3.51
2453 3831 1.153349 CCTAAGCCCGCTTCTGACC 60.153 63.158 4.96 0.00 37.47 4.02
2454 3832 1.519455 CTAAGCCCGCTTCTGACCG 60.519 63.158 4.96 0.00 37.47 4.79
2455 3833 3.659089 TAAGCCCGCTTCTGACCGC 62.659 63.158 4.96 0.00 37.47 5.68
2460 3838 4.069232 CGCTTCTGACCGCCCTGA 62.069 66.667 0.00 0.00 0.00 3.86
2461 3839 2.435059 GCTTCTGACCGCCCTGAC 60.435 66.667 0.00 0.00 0.00 3.51
2462 3840 2.266055 CTTCTGACCGCCCTGACC 59.734 66.667 0.00 0.00 0.00 4.02
2463 3841 3.316573 CTTCTGACCGCCCTGACCC 62.317 68.421 0.00 0.00 0.00 4.46
2464 3842 4.631740 TCTGACCGCCCTGACCCA 62.632 66.667 0.00 0.00 0.00 4.51
2465 3843 4.394712 CTGACCGCCCTGACCCAC 62.395 72.222 0.00 0.00 0.00 4.61
2469 3847 4.278513 CCGCCCTGACCCACCAAA 62.279 66.667 0.00 0.00 0.00 3.28
2470 3848 2.203422 CGCCCTGACCCACCAAAA 60.203 61.111 0.00 0.00 0.00 2.44
2471 3849 1.830408 CGCCCTGACCCACCAAAAA 60.830 57.895 0.00 0.00 0.00 1.94
2472 3850 1.745890 GCCCTGACCCACCAAAAAC 59.254 57.895 0.00 0.00 0.00 2.43
2473 3851 1.754380 GCCCTGACCCACCAAAAACC 61.754 60.000 0.00 0.00 0.00 3.27
2474 3852 1.118965 CCCTGACCCACCAAAAACCC 61.119 60.000 0.00 0.00 0.00 4.11
2475 3853 1.118965 CCTGACCCACCAAAAACCCC 61.119 60.000 0.00 0.00 0.00 4.95
2476 3854 0.105709 CTGACCCACCAAAAACCCCT 60.106 55.000 0.00 0.00 0.00 4.79
2477 3855 0.105913 TGACCCACCAAAAACCCCTC 60.106 55.000 0.00 0.00 0.00 4.30
2478 3856 0.830444 GACCCACCAAAAACCCCTCC 60.830 60.000 0.00 0.00 0.00 4.30
2479 3857 1.535444 CCCACCAAAAACCCCTCCC 60.535 63.158 0.00 0.00 0.00 4.30
2480 3858 1.546738 CCACCAAAAACCCCTCCCT 59.453 57.895 0.00 0.00 0.00 4.20
2481 3859 0.541998 CCACCAAAAACCCCTCCCTC 60.542 60.000 0.00 0.00 0.00 4.30
2482 3860 0.541998 CACCAAAAACCCCTCCCTCC 60.542 60.000 0.00 0.00 0.00 4.30
2483 3861 0.704813 ACCAAAAACCCCTCCCTCCT 60.705 55.000 0.00 0.00 0.00 3.69
2484 3862 0.039764 CCAAAAACCCCTCCCTCCTC 59.960 60.000 0.00 0.00 0.00 3.71
2485 3863 0.039764 CAAAAACCCCTCCCTCCTCC 59.960 60.000 0.00 0.00 0.00 4.30
2486 3864 1.147190 AAAAACCCCTCCCTCCTCCC 61.147 60.000 0.00 0.00 0.00 4.30
2487 3865 3.945064 AAACCCCTCCCTCCTCCCG 62.945 68.421 0.00 0.00 0.00 5.14
2496 3874 3.488090 CTCCTCCCGCGCGTTTTC 61.488 66.667 29.95 0.00 0.00 2.29
2502 3880 4.424430 CCGCGCGTTTTCGGTCAG 62.424 66.667 29.95 4.86 44.29 3.51
2506 3884 4.736631 GCGTTTTCGGTCAGCGCC 62.737 66.667 2.29 0.00 44.29 6.53
2534 3912 3.204827 GTCAGCGCCCGCATTCAT 61.205 61.111 15.50 0.00 44.88 2.57
2535 3913 3.204119 TCAGCGCCCGCATTCATG 61.204 61.111 15.50 4.08 44.88 3.07
2536 3914 3.511595 CAGCGCCCGCATTCATGT 61.512 61.111 15.50 0.00 44.88 3.21
2537 3915 3.204827 AGCGCCCGCATTCATGTC 61.205 61.111 15.50 0.00 44.88 3.06
2538 3916 3.204827 GCGCCCGCATTCATGTCT 61.205 61.111 7.91 0.00 41.49 3.41
2539 3917 2.711311 CGCCCGCATTCATGTCTG 59.289 61.111 0.00 0.00 0.00 3.51
2540 3918 2.827051 CGCCCGCATTCATGTCTGG 61.827 63.158 0.00 0.00 0.00 3.86
2541 3919 3.113745 CCCGCATTCATGTCTGGC 58.886 61.111 0.00 0.00 0.00 4.85
2542 3920 2.484062 CCCGCATTCATGTCTGGCC 61.484 63.158 0.00 0.00 0.00 5.36
2543 3921 1.750018 CCGCATTCATGTCTGGCCA 60.750 57.895 4.71 4.71 0.00 5.36
2544 3922 1.721664 CCGCATTCATGTCTGGCCAG 61.722 60.000 27.87 27.87 0.00 4.85
2545 3923 0.745486 CGCATTCATGTCTGGCCAGA 60.745 55.000 32.00 32.00 34.56 3.86
2546 3924 1.022735 GCATTCATGTCTGGCCAGAG 58.977 55.000 35.92 23.65 38.27 3.35
2547 3925 1.022735 CATTCATGTCTGGCCAGAGC 58.977 55.000 35.92 27.39 38.27 4.09
2548 3926 0.622136 ATTCATGTCTGGCCAGAGCA 59.378 50.000 35.92 31.46 42.56 4.26
2549 3927 0.035725 TTCATGTCTGGCCAGAGCAG 60.036 55.000 35.92 25.48 42.56 4.24
2550 3928 0.906282 TCATGTCTGGCCAGAGCAGA 60.906 55.000 35.92 27.21 42.56 4.26
2551 3929 0.743701 CATGTCTGGCCAGAGCAGAC 60.744 60.000 35.92 23.77 42.54 3.51
2552 3930 2.125753 GTCTGGCCAGAGCAGACG 60.126 66.667 35.92 6.89 42.56 4.18
2553 3931 4.074526 TCTGGCCAGAGCAGACGC 62.075 66.667 32.00 0.00 42.56 5.19
2556 3934 4.521062 GGCCAGAGCAGACGCGAT 62.521 66.667 15.93 0.00 45.49 4.58
2557 3935 2.959071 GCCAGAGCAGACGCGATC 60.959 66.667 15.93 6.88 45.49 3.69
2558 3936 2.653448 CCAGAGCAGACGCGATCG 60.653 66.667 15.93 11.69 45.49 3.69
2559 3937 3.318555 CAGAGCAGACGCGATCGC 61.319 66.667 29.80 29.80 45.49 4.58
2560 3938 3.513438 AGAGCAGACGCGATCGCT 61.513 61.111 34.69 22.77 45.49 4.93
2561 3939 3.021788 GAGCAGACGCGATCGCTC 61.022 66.667 34.69 28.30 45.49 5.03
2562 3940 3.741435 GAGCAGACGCGATCGCTCA 62.741 63.158 34.69 0.00 45.44 4.26
2563 3941 3.611792 GCAGACGCGATCGCTCAC 61.612 66.667 34.69 24.46 39.84 3.51
2564 3942 2.101185 CAGACGCGATCGCTCACT 59.899 61.111 34.69 26.05 39.84 3.41
2565 3943 2.101185 AGACGCGATCGCTCACTG 59.899 61.111 34.69 22.22 39.84 3.66
2566 3944 2.951745 GACGCGATCGCTCACTGG 60.952 66.667 34.69 21.53 39.84 4.00
2580 3958 4.183686 CTGGCGCCGGCATTGAAG 62.184 66.667 28.98 12.12 42.47 3.02
2626 4004 4.704833 GCGCCACTTCCCTCTGCA 62.705 66.667 0.00 0.00 0.00 4.41
2627 4005 2.435586 CGCCACTTCCCTCTGCAG 60.436 66.667 7.63 7.63 0.00 4.41
2628 4006 2.045536 GCCACTTCCCTCTGCAGG 60.046 66.667 15.13 4.45 39.98 4.85
2629 4007 2.045536 CCACTTCCCTCTGCAGGC 60.046 66.667 15.13 0.00 38.72 4.85
2630 4008 2.435586 CACTTCCCTCTGCAGGCG 60.436 66.667 15.13 5.38 38.72 5.52
2631 4009 2.604686 ACTTCCCTCTGCAGGCGA 60.605 61.111 15.13 3.98 38.72 5.54
2632 4010 2.125350 CTTCCCTCTGCAGGCGAC 60.125 66.667 15.13 0.00 38.72 5.19
2633 4011 2.604686 TTCCCTCTGCAGGCGACT 60.605 61.111 15.13 0.00 46.44 4.18
2646 4024 3.608041 CGACTGTCGCACGTTCAA 58.392 55.556 17.94 0.00 31.14 2.69
2647 4025 1.921475 CGACTGTCGCACGTTCAAA 59.079 52.632 17.94 0.00 31.14 2.69
2648 4026 0.381428 CGACTGTCGCACGTTCAAAC 60.381 55.000 17.94 0.00 31.14 2.93
2649 4027 3.880467 CGACTGTCGCACGTTCAAACG 62.880 57.143 17.94 13.34 45.04 3.60
2659 4037 2.849521 GTTCAAACGACACAACGGC 58.150 52.632 0.00 0.00 37.61 5.68
2660 4038 0.590481 GTTCAAACGACACAACGGCC 60.590 55.000 0.00 0.00 37.61 6.13
2661 4039 2.037913 TTCAAACGACACAACGGCCG 62.038 55.000 26.86 26.86 37.61 6.13
2662 4040 3.944233 AAACGACACAACGGCCGC 61.944 61.111 28.58 6.59 37.61 6.53
2683 4061 4.436998 CTCGTCCGTCTGCCACCC 62.437 72.222 0.00 0.00 0.00 4.61
2693 4071 2.755064 TGCCACCCGCATTGATGG 60.755 61.111 0.00 0.00 44.64 3.51
2695 4073 2.755064 CCACCCGCATTGATGGCA 60.755 61.111 0.00 0.00 0.00 4.92
2696 4074 2.491152 CACCCGCATTGATGGCAC 59.509 61.111 0.00 0.00 0.00 5.01
2697 4075 3.133464 ACCCGCATTGATGGCACG 61.133 61.111 0.00 0.00 0.00 5.34
2698 4076 4.557605 CCCGCATTGATGGCACGC 62.558 66.667 0.00 0.00 0.00 5.34
2699 4077 4.892379 CCGCATTGATGGCACGCG 62.892 66.667 3.53 3.53 45.25 6.01
2700 4078 4.892379 CGCATTGATGGCACGCGG 62.892 66.667 12.47 0.00 42.13 6.46
2701 4079 3.814268 GCATTGATGGCACGCGGT 61.814 61.111 12.47 0.00 0.00 5.68
2702 4080 2.876955 CATTGATGGCACGCGGTT 59.123 55.556 12.47 0.00 0.00 4.44
2703 4081 1.514657 CATTGATGGCACGCGGTTG 60.515 57.895 12.47 0.56 0.00 3.77
2704 4082 3.340953 ATTGATGGCACGCGGTTGC 62.341 57.895 12.47 12.69 42.18 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 142 8.396272 TCTCCTATTTTTCCTCTTGTTTTCTG 57.604 34.615 0.00 0.00 0.00 3.02
168 175 2.095466 CCGAACCAAAAGCGCTTTGATA 60.095 45.455 34.23 0.00 46.35 2.15
170 177 0.030101 CCGAACCAAAAGCGCTTTGA 59.970 50.000 34.23 0.00 46.35 2.69
172 179 0.030235 GACCGAACCAAAAGCGCTTT 59.970 50.000 29.11 29.11 0.00 3.51
177 184 0.958822 ACATGGACCGAACCAAAAGC 59.041 50.000 0.00 0.00 43.47 3.51
180 187 1.313772 CACACATGGACCGAACCAAA 58.686 50.000 0.00 0.00 43.47 3.28
185 192 1.044611 TCTCACACACATGGACCGAA 58.955 50.000 0.00 0.00 0.00 4.30
207 214 7.069986 TGAATAGTAGAGATTAGCTTCACCCT 58.930 38.462 0.00 0.00 0.00 4.34
219 226 8.602472 ACAAACTCTCCTTGAATAGTAGAGAT 57.398 34.615 0.00 0.00 37.66 2.75
220 227 8.307483 CAACAAACTCTCCTTGAATAGTAGAGA 58.693 37.037 0.00 0.00 37.66 3.10
221 228 7.547370 CCAACAAACTCTCCTTGAATAGTAGAG 59.453 40.741 0.00 0.00 39.65 2.43
222 229 7.016268 ACCAACAAACTCTCCTTGAATAGTAGA 59.984 37.037 0.00 0.00 0.00 2.59
223 230 7.162082 ACCAACAAACTCTCCTTGAATAGTAG 58.838 38.462 0.00 0.00 0.00 2.57
224 231 7.074653 ACCAACAAACTCTCCTTGAATAGTA 57.925 36.000 0.00 0.00 0.00 1.82
225 232 5.941788 ACCAACAAACTCTCCTTGAATAGT 58.058 37.500 0.00 0.00 0.00 2.12
226 233 6.884280 AACCAACAAACTCTCCTTGAATAG 57.116 37.500 0.00 0.00 0.00 1.73
231 238 4.399303 AGTGAAACCAACAAACTCTCCTTG 59.601 41.667 0.00 0.00 37.80 3.61
235 242 5.949735 TGAAAGTGAAACCAACAAACTCTC 58.050 37.500 0.00 0.00 37.80 3.20
252 259 6.042093 ACATGTATCGATGGTAGGATGAAAGT 59.958 38.462 8.54 0.00 0.00 2.66
263 270 3.181465 GGGAGTGAACATGTATCGATGGT 60.181 47.826 8.54 0.00 0.00 3.55
295 302 8.504811 TGAGGGTGATCATATGGTTTAGATAA 57.495 34.615 0.00 0.00 0.00 1.75
296 303 8.685257 ATGAGGGTGATCATATGGTTTAGATA 57.315 34.615 0.00 0.00 38.15 1.98
331 338 2.780010 AGGAGATTGGGGGTCAGTTATG 59.220 50.000 0.00 0.00 0.00 1.90
333 340 2.478292 GAGGAGATTGGGGGTCAGTTA 58.522 52.381 0.00 0.00 0.00 2.24
344 351 5.470098 TCTTTCCTGAAAAACGAGGAGATTG 59.530 40.000 0.00 0.00 39.59 2.67
346 353 5.228945 TCTTTCCTGAAAAACGAGGAGAT 57.771 39.130 0.00 0.00 39.59 2.75
347 354 4.682778 TCTTTCCTGAAAAACGAGGAGA 57.317 40.909 0.00 0.00 39.59 3.71
348 355 5.751243 TTTCTTTCCTGAAAAACGAGGAG 57.249 39.130 0.00 0.00 39.59 3.69
349 356 5.825679 TGATTTCTTTCCTGAAAAACGAGGA 59.174 36.000 0.00 0.00 39.08 3.71
350 357 5.915196 GTGATTTCTTTCCTGAAAAACGAGG 59.085 40.000 0.00 0.00 39.08 4.63
351 358 6.729187 AGTGATTTCTTTCCTGAAAAACGAG 58.271 36.000 0.00 0.00 39.08 4.18
353 360 7.755582 AAAGTGATTTCTTTCCTGAAAAACG 57.244 32.000 0.00 0.00 39.08 3.60
371 378 8.939201 TTTATGTTGATTGCTTTTGAAAGTGA 57.061 26.923 5.47 0.00 38.28 3.41
441 448 5.837191 GTGTACGTACAACGAGTTGATTTTG 59.163 40.000 28.89 9.13 46.05 2.44
489 626 5.934781 AGAGAATCCATAGGCAAGGTAAAG 58.065 41.667 0.00 0.00 33.66 1.85
517 654 3.063997 CGGTTGAGATTGAGGTACATTGC 59.936 47.826 0.00 0.00 0.00 3.56
552 689 6.006449 AGCAACTTCATTCTAGTGGTTCAAT 58.994 36.000 0.00 0.00 0.00 2.57
635 778 1.956477 ACAAAATGCAGGGTGTGACTC 59.044 47.619 0.00 0.00 0.00 3.36
770 913 1.017387 GTCGATGCAGGACCAATTCC 58.983 55.000 9.02 0.00 46.33 3.01
778 921 2.362503 AGACGGGTCGATGCAGGA 60.363 61.111 0.00 0.00 34.09 3.86
812 2153 2.913765 ATCGATGCCTCCGAGCTCG 61.914 63.158 29.06 29.06 39.55 5.03
814 2155 2.733301 CATCGATGCCTCCGAGCT 59.267 61.111 13.37 0.00 39.55 4.09
865 2206 1.550072 TCAACTCGACATGGCATGAGA 59.450 47.619 32.74 26.24 32.81 3.27
872 2213 6.533012 GTGGATATCATATCAACTCGACATGG 59.467 42.308 6.99 0.00 28.90 3.66
922 2264 3.565902 GCAGGCTGGAAGTCCATAAATAC 59.434 47.826 17.64 0.00 41.78 1.89
954 2296 2.463589 GAACGGCCTGGTGTGGATGA 62.464 60.000 0.00 0.00 0.00 2.92
978 2320 2.594592 ACTCCAACAGCCGGCAAC 60.595 61.111 31.54 0.00 0.00 4.17
1138 2482 3.937706 AGTTGAGCTCAAATGGATTCGAG 59.062 43.478 29.99 0.00 37.63 4.04
1139 2483 3.942829 AGTTGAGCTCAAATGGATTCGA 58.057 40.909 29.99 1.61 37.63 3.71
1142 2486 6.664816 TGGAATTAGTTGAGCTCAAATGGATT 59.335 34.615 33.30 29.25 37.63 3.01
1143 2487 6.189859 TGGAATTAGTTGAGCTCAAATGGAT 58.810 36.000 33.30 24.28 37.63 3.41
1144 2488 5.569355 TGGAATTAGTTGAGCTCAAATGGA 58.431 37.500 33.30 23.32 37.63 3.41
1145 2489 5.649395 TCTGGAATTAGTTGAGCTCAAATGG 59.351 40.000 33.30 16.44 37.63 3.16
1146 2490 6.549952 GTCTGGAATTAGTTGAGCTCAAATG 58.450 40.000 33.30 18.02 37.63 2.32
1147 2491 5.352569 CGTCTGGAATTAGTTGAGCTCAAAT 59.647 40.000 29.81 29.81 37.63 2.32
1148 2492 4.690748 CGTCTGGAATTAGTTGAGCTCAAA 59.309 41.667 29.99 15.96 37.63 2.69
1149 2493 4.245660 CGTCTGGAATTAGTTGAGCTCAA 58.754 43.478 25.16 25.16 0.00 3.02
1150 2494 3.368427 CCGTCTGGAATTAGTTGAGCTCA 60.368 47.826 13.74 13.74 37.49 4.26
1151 2495 3.119101 TCCGTCTGGAATTAGTTGAGCTC 60.119 47.826 6.82 6.82 42.85 4.09
1152 2496 2.832129 TCCGTCTGGAATTAGTTGAGCT 59.168 45.455 0.00 0.00 42.85 4.09
1153 2497 3.190874 CTCCGTCTGGAATTAGTTGAGC 58.809 50.000 0.00 0.00 45.87 4.26
1154 2498 3.430929 CCCTCCGTCTGGAATTAGTTGAG 60.431 52.174 0.00 0.00 45.87 3.02
1170 2514 6.401047 TCATGTAAAGTAATACTCCCTCCG 57.599 41.667 0.00 0.00 0.00 4.63
1406 2767 0.824109 TGTCCATGTCGATCTCCACC 59.176 55.000 0.00 0.00 0.00 4.61
1409 2770 0.872021 GCGTGTCCATGTCGATCTCC 60.872 60.000 0.00 0.00 0.00 3.71
1552 2913 0.959372 CGTGTCGTCCTCCAGGTACT 60.959 60.000 0.00 0.00 43.88 2.73
1901 3278 5.932021 AATAATTCGATTTTTCGCAGCAC 57.068 34.783 0.00 0.00 0.00 4.40
2088 3465 8.627208 ACGAAGGGAGTATATAGATAACGAAA 57.373 34.615 0.00 0.00 0.00 3.46
2106 3484 2.277084 CAAGTATTTCCGGACGAAGGG 58.723 52.381 1.83 0.00 0.00 3.95
2107 3485 2.928116 GACAAGTATTTCCGGACGAAGG 59.072 50.000 1.83 0.00 0.00 3.46
2108 3486 2.928116 GGACAAGTATTTCCGGACGAAG 59.072 50.000 1.83 0.00 0.00 3.79
2109 3487 2.564062 AGGACAAGTATTTCCGGACGAA 59.436 45.455 1.83 0.00 36.95 3.85
2110 3488 2.094390 CAGGACAAGTATTTCCGGACGA 60.094 50.000 1.83 0.00 36.95 4.20
2111 3489 2.094390 TCAGGACAAGTATTTCCGGACG 60.094 50.000 1.83 0.00 36.95 4.79
2112 3490 3.604875 TCAGGACAAGTATTTCCGGAC 57.395 47.619 1.83 0.00 36.95 4.79
2113 3491 4.627284 TTTCAGGACAAGTATTTCCGGA 57.373 40.909 0.00 0.00 36.95 5.14
2114 3492 5.393027 CCATTTTCAGGACAAGTATTTCCGG 60.393 44.000 0.00 0.00 36.95 5.14
2115 3493 5.414454 TCCATTTTCAGGACAAGTATTTCCG 59.586 40.000 0.00 0.00 36.95 4.30
2116 3494 6.834168 TCCATTTTCAGGACAAGTATTTCC 57.166 37.500 0.00 0.00 0.00 3.13
2121 3499 8.748412 CCATTTTATCCATTTTCAGGACAAGTA 58.252 33.333 0.00 0.00 38.13 2.24
2122 3500 7.454380 TCCATTTTATCCATTTTCAGGACAAGT 59.546 33.333 0.00 0.00 38.13 3.16
2123 3501 7.839907 TCCATTTTATCCATTTTCAGGACAAG 58.160 34.615 0.00 0.00 38.13 3.16
2124 3502 7.789202 TCCATTTTATCCATTTTCAGGACAA 57.211 32.000 0.00 0.00 38.13 3.18
2125 3503 7.399765 ACATCCATTTTATCCATTTTCAGGACA 59.600 33.333 0.00 0.00 38.13 4.02
2126 3504 7.785033 ACATCCATTTTATCCATTTTCAGGAC 58.215 34.615 0.00 0.00 38.13 3.85
2127 3505 7.976414 ACATCCATTTTATCCATTTTCAGGA 57.024 32.000 0.00 0.00 39.97 3.86
2128 3506 9.918630 GATACATCCATTTTATCCATTTTCAGG 57.081 33.333 0.00 0.00 0.00 3.86
2169 3547 9.787435 TGTTCTACAAATGGTTGTATTTAGACT 57.213 29.630 0.10 0.00 46.57 3.24
2179 3557 7.537306 CGGAAATACTTGTTCTACAAATGGTTG 59.463 37.037 0.00 0.00 37.69 3.77
2180 3558 7.308951 CCGGAAATACTTGTTCTACAAATGGTT 60.309 37.037 0.00 0.00 37.69 3.67
2181 3559 6.150474 CCGGAAATACTTGTTCTACAAATGGT 59.850 38.462 0.00 0.00 37.69 3.55
2182 3560 6.373216 TCCGGAAATACTTGTTCTACAAATGG 59.627 38.462 0.00 0.00 37.69 3.16
2183 3561 7.241376 GTCCGGAAATACTTGTTCTACAAATG 58.759 38.462 5.23 0.00 37.69 2.32
2184 3562 6.091713 CGTCCGGAAATACTTGTTCTACAAAT 59.908 38.462 5.23 0.00 37.69 2.32
2185 3563 5.406175 CGTCCGGAAATACTTGTTCTACAAA 59.594 40.000 5.23 0.00 37.69 2.83
2186 3564 4.925054 CGTCCGGAAATACTTGTTCTACAA 59.075 41.667 5.23 0.00 36.54 2.41
2187 3565 4.487948 CGTCCGGAAATACTTGTTCTACA 58.512 43.478 5.23 0.00 0.00 2.74
2188 3566 3.861689 CCGTCCGGAAATACTTGTTCTAC 59.138 47.826 5.23 0.00 37.50 2.59
2189 3567 3.763360 TCCGTCCGGAAATACTTGTTCTA 59.237 43.478 5.23 0.00 42.05 2.10
2190 3568 2.564062 TCCGTCCGGAAATACTTGTTCT 59.436 45.455 5.23 0.00 42.05 3.01
2191 3569 2.963432 TCCGTCCGGAAATACTTGTTC 58.037 47.619 5.23 0.00 42.05 3.18
2204 3582 1.588139 GCAATACTCCGTCCGTCCG 60.588 63.158 0.00 0.00 0.00 4.79
2205 3583 0.527817 CTGCAATACTCCGTCCGTCC 60.528 60.000 0.00 0.00 0.00 4.79
2206 3584 0.454600 TCTGCAATACTCCGTCCGTC 59.545 55.000 0.00 0.00 0.00 4.79
2207 3585 0.456221 CTCTGCAATACTCCGTCCGT 59.544 55.000 0.00 0.00 0.00 4.69
2208 3586 0.456221 ACTCTGCAATACTCCGTCCG 59.544 55.000 0.00 0.00 0.00 4.79
2209 3587 2.674796 AACTCTGCAATACTCCGTCC 57.325 50.000 0.00 0.00 0.00 4.79
2210 3588 4.113354 CCTTAACTCTGCAATACTCCGTC 58.887 47.826 0.00 0.00 0.00 4.79
2211 3589 3.679083 GCCTTAACTCTGCAATACTCCGT 60.679 47.826 0.00 0.00 0.00 4.69
2212 3590 2.866762 GCCTTAACTCTGCAATACTCCG 59.133 50.000 0.00 0.00 0.00 4.63
2213 3591 2.866762 CGCCTTAACTCTGCAATACTCC 59.133 50.000 0.00 0.00 0.00 3.85
2214 3592 3.522553 ACGCCTTAACTCTGCAATACTC 58.477 45.455 0.00 0.00 0.00 2.59
2215 3593 3.611766 ACGCCTTAACTCTGCAATACT 57.388 42.857 0.00 0.00 0.00 2.12
2216 3594 4.679662 TCTACGCCTTAACTCTGCAATAC 58.320 43.478 0.00 0.00 0.00 1.89
2217 3595 4.202121 CCTCTACGCCTTAACTCTGCAATA 60.202 45.833 0.00 0.00 0.00 1.90
2218 3596 3.430929 CCTCTACGCCTTAACTCTGCAAT 60.431 47.826 0.00 0.00 0.00 3.56
2219 3597 2.094182 CCTCTACGCCTTAACTCTGCAA 60.094 50.000 0.00 0.00 0.00 4.08
2220 3598 1.476891 CCTCTACGCCTTAACTCTGCA 59.523 52.381 0.00 0.00 0.00 4.41
2221 3599 1.803252 GCCTCTACGCCTTAACTCTGC 60.803 57.143 0.00 0.00 0.00 4.26
2222 3600 1.476891 TGCCTCTACGCCTTAACTCTG 59.523 52.381 0.00 0.00 0.00 3.35
2223 3601 1.751924 CTGCCTCTACGCCTTAACTCT 59.248 52.381 0.00 0.00 0.00 3.24
2224 3602 1.749634 TCTGCCTCTACGCCTTAACTC 59.250 52.381 0.00 0.00 0.00 3.01
2225 3603 1.848652 TCTGCCTCTACGCCTTAACT 58.151 50.000 0.00 0.00 0.00 2.24
2226 3604 2.474816 CATCTGCCTCTACGCCTTAAC 58.525 52.381 0.00 0.00 0.00 2.01
2227 3605 1.202533 GCATCTGCCTCTACGCCTTAA 60.203 52.381 0.00 0.00 34.31 1.85
2228 3606 0.389391 GCATCTGCCTCTACGCCTTA 59.611 55.000 0.00 0.00 34.31 2.69
2229 3607 1.144936 GCATCTGCCTCTACGCCTT 59.855 57.895 0.00 0.00 34.31 4.35
2230 3608 1.406065 ATGCATCTGCCTCTACGCCT 61.406 55.000 0.00 0.00 41.18 5.52
2231 3609 0.318441 TATGCATCTGCCTCTACGCC 59.682 55.000 0.19 0.00 41.18 5.68
2232 3610 2.376808 ATATGCATCTGCCTCTACGC 57.623 50.000 0.19 0.00 41.18 4.42
2233 3611 6.564328 TGTATTATATGCATCTGCCTCTACG 58.436 40.000 0.19 0.00 41.18 3.51
2234 3612 7.493971 CCTTGTATTATATGCATCTGCCTCTAC 59.506 40.741 0.19 0.00 41.18 2.59
2235 3613 7.400052 TCCTTGTATTATATGCATCTGCCTCTA 59.600 37.037 0.19 0.00 41.18 2.43
2236 3614 6.214208 TCCTTGTATTATATGCATCTGCCTCT 59.786 38.462 0.19 0.00 41.18 3.69
2237 3615 6.409704 TCCTTGTATTATATGCATCTGCCTC 58.590 40.000 0.19 0.00 41.18 4.70
2238 3616 6.378661 TCCTTGTATTATATGCATCTGCCT 57.621 37.500 0.19 0.00 41.18 4.75
2239 3617 6.881065 TCTTCCTTGTATTATATGCATCTGCC 59.119 38.462 0.19 0.00 41.18 4.85
2240 3618 7.912056 TCTTCCTTGTATTATATGCATCTGC 57.088 36.000 0.19 0.00 42.50 4.26
2253 3631 9.892130 CTTTAGGAACTGTATTCTTCCTTGTAT 57.108 33.333 4.33 0.00 43.24 2.29
2254 3632 8.319146 CCTTTAGGAACTGTATTCTTCCTTGTA 58.681 37.037 4.33 0.00 43.24 2.41
2255 3633 7.168905 CCTTTAGGAACTGTATTCTTCCTTGT 58.831 38.462 4.33 0.00 43.24 3.16
2256 3634 6.094186 GCCTTTAGGAACTGTATTCTTCCTTG 59.906 42.308 4.33 0.00 43.24 3.61
2257 3635 6.181190 GCCTTTAGGAACTGTATTCTTCCTT 58.819 40.000 4.33 0.00 43.24 3.36
2258 3636 5.250774 TGCCTTTAGGAACTGTATTCTTCCT 59.749 40.000 0.00 4.43 46.66 3.36
2259 3637 5.497474 TGCCTTTAGGAACTGTATTCTTCC 58.503 41.667 0.00 0.00 41.52 3.46
2260 3638 7.051000 AGATGCCTTTAGGAACTGTATTCTTC 58.949 38.462 0.00 0.00 41.52 2.87
2261 3639 6.963322 AGATGCCTTTAGGAACTGTATTCTT 58.037 36.000 0.00 0.00 41.52 2.52
2262 3640 6.408662 GGAGATGCCTTTAGGAACTGTATTCT 60.409 42.308 0.00 0.00 41.52 2.40
2263 3641 5.760743 GGAGATGCCTTTAGGAACTGTATTC 59.239 44.000 0.00 0.00 41.52 1.75
2264 3642 5.191722 TGGAGATGCCTTTAGGAACTGTATT 59.808 40.000 0.00 0.00 36.96 1.89
2265 3643 4.721776 TGGAGATGCCTTTAGGAACTGTAT 59.278 41.667 0.00 0.00 36.96 2.29
2266 3644 4.101114 TGGAGATGCCTTTAGGAACTGTA 58.899 43.478 0.00 0.00 36.96 2.74
2267 3645 2.912956 TGGAGATGCCTTTAGGAACTGT 59.087 45.455 0.00 0.00 36.96 3.55
2268 3646 3.634397 TGGAGATGCCTTTAGGAACTG 57.366 47.619 0.00 0.00 36.96 3.16
2269 3647 3.330701 TGTTGGAGATGCCTTTAGGAACT 59.669 43.478 0.00 0.00 39.44 3.01
2270 3648 3.440522 GTGTTGGAGATGCCTTTAGGAAC 59.559 47.826 0.00 0.00 37.39 3.62
2271 3649 3.330701 AGTGTTGGAGATGCCTTTAGGAA 59.669 43.478 0.00 0.00 37.39 3.36
2272 3650 2.912956 AGTGTTGGAGATGCCTTTAGGA 59.087 45.455 0.00 0.00 37.39 2.94
2273 3651 3.012518 CAGTGTTGGAGATGCCTTTAGG 58.987 50.000 0.00 0.00 37.63 2.69
2274 3652 3.686726 GTCAGTGTTGGAGATGCCTTTAG 59.313 47.826 0.00 0.00 37.63 1.85
2275 3653 3.559171 GGTCAGTGTTGGAGATGCCTTTA 60.559 47.826 0.00 0.00 37.63 1.85
2276 3654 2.508526 GTCAGTGTTGGAGATGCCTTT 58.491 47.619 0.00 0.00 37.63 3.11
2277 3655 1.271597 GGTCAGTGTTGGAGATGCCTT 60.272 52.381 0.00 0.00 37.63 4.35
2278 3656 0.326264 GGTCAGTGTTGGAGATGCCT 59.674 55.000 0.00 0.00 37.63 4.75
2279 3657 0.678048 GGGTCAGTGTTGGAGATGCC 60.678 60.000 0.00 0.00 37.10 4.40
2280 3658 0.326264 AGGGTCAGTGTTGGAGATGC 59.674 55.000 0.00 0.00 0.00 3.91
2281 3659 1.905215 AGAGGGTCAGTGTTGGAGATG 59.095 52.381 0.00 0.00 0.00 2.90
2282 3660 2.334006 AGAGGGTCAGTGTTGGAGAT 57.666 50.000 0.00 0.00 0.00 2.75
2283 3661 2.992847 TAGAGGGTCAGTGTTGGAGA 57.007 50.000 0.00 0.00 0.00 3.71
2284 3662 2.354203 GCTTAGAGGGTCAGTGTTGGAG 60.354 54.545 0.00 0.00 0.00 3.86
2285 3663 1.623811 GCTTAGAGGGTCAGTGTTGGA 59.376 52.381 0.00 0.00 0.00 3.53
2286 3664 1.625818 AGCTTAGAGGGTCAGTGTTGG 59.374 52.381 0.00 0.00 0.00 3.77
2287 3665 2.354203 GGAGCTTAGAGGGTCAGTGTTG 60.354 54.545 0.00 0.00 35.67 3.33
2288 3666 1.903183 GGAGCTTAGAGGGTCAGTGTT 59.097 52.381 0.00 0.00 35.67 3.32
2289 3667 1.562783 GGAGCTTAGAGGGTCAGTGT 58.437 55.000 0.00 0.00 35.67 3.55
2290 3668 0.457851 CGGAGCTTAGAGGGTCAGTG 59.542 60.000 0.00 0.00 35.67 3.66
2291 3669 0.039911 ACGGAGCTTAGAGGGTCAGT 59.960 55.000 0.00 0.00 37.32 3.41
2292 3670 0.741915 GACGGAGCTTAGAGGGTCAG 59.258 60.000 0.00 0.00 35.67 3.51
2293 3671 0.039180 TGACGGAGCTTAGAGGGTCA 59.961 55.000 0.00 0.00 35.67 4.02
2294 3672 1.135053 GTTGACGGAGCTTAGAGGGTC 60.135 57.143 0.00 0.00 0.00 4.46
2295 3673 0.896226 GTTGACGGAGCTTAGAGGGT 59.104 55.000 0.00 0.00 0.00 4.34
2296 3674 1.134965 CAGTTGACGGAGCTTAGAGGG 60.135 57.143 0.00 0.00 0.00 4.30
2297 3675 1.546476 ACAGTTGACGGAGCTTAGAGG 59.454 52.381 0.00 0.00 0.00 3.69
2298 3676 3.246619 GAACAGTTGACGGAGCTTAGAG 58.753 50.000 0.00 0.00 0.00 2.43
2299 3677 2.351447 CGAACAGTTGACGGAGCTTAGA 60.351 50.000 0.00 0.00 0.00 2.10
2300 3678 1.986378 CGAACAGTTGACGGAGCTTAG 59.014 52.381 0.00 0.00 0.00 2.18
2301 3679 1.610038 TCGAACAGTTGACGGAGCTTA 59.390 47.619 0.00 0.00 0.00 3.09
2302 3680 0.387929 TCGAACAGTTGACGGAGCTT 59.612 50.000 0.00 0.00 0.00 3.74
2303 3681 0.387929 TTCGAACAGTTGACGGAGCT 59.612 50.000 0.00 0.00 0.00 4.09
2304 3682 0.507358 GTTCGAACAGTTGACGGAGC 59.493 55.000 23.12 0.00 0.00 4.70
2305 3683 1.137513 GGTTCGAACAGTTGACGGAG 58.862 55.000 28.24 0.00 0.00 4.63
2306 3684 0.460722 TGGTTCGAACAGTTGACGGA 59.539 50.000 28.24 0.00 0.00 4.69
2307 3685 1.194547 CATGGTTCGAACAGTTGACGG 59.805 52.381 28.24 6.16 0.00 4.79
2308 3686 1.194547 CCATGGTTCGAACAGTTGACG 59.805 52.381 28.24 9.74 0.00 4.35
2309 3687 2.489971 TCCATGGTTCGAACAGTTGAC 58.510 47.619 28.24 11.34 0.00 3.18
2310 3688 2.920724 TCCATGGTTCGAACAGTTGA 57.079 45.000 28.24 16.21 0.00 3.18
2311 3689 2.878406 ACTTCCATGGTTCGAACAGTTG 59.122 45.455 28.24 20.24 0.00 3.16
2312 3690 3.139077 GACTTCCATGGTTCGAACAGTT 58.861 45.455 28.24 10.47 0.00 3.16
2313 3691 2.104111 TGACTTCCATGGTTCGAACAGT 59.896 45.455 28.24 20.91 0.00 3.55
2314 3692 2.766313 TGACTTCCATGGTTCGAACAG 58.234 47.619 28.24 18.02 0.00 3.16
2315 3693 2.920724 TGACTTCCATGGTTCGAACA 57.079 45.000 28.24 15.43 0.00 3.18
2316 3694 2.678336 GGATGACTTCCATGGTTCGAAC 59.322 50.000 20.14 20.14 44.74 3.95
2317 3695 2.985896 GGATGACTTCCATGGTTCGAA 58.014 47.619 12.58 0.00 44.74 3.71
2318 3696 2.691409 GGATGACTTCCATGGTTCGA 57.309 50.000 12.58 0.00 44.74 3.71
2327 3705 1.017387 GACCGCATTGGATGACTTCC 58.983 55.000 0.30 0.30 45.69 3.46
2328 3706 1.017387 GGACCGCATTGGATGACTTC 58.983 55.000 0.00 0.00 42.00 3.01
2329 3707 0.620556 AGGACCGCATTGGATGACTT 59.379 50.000 0.00 0.00 42.00 3.01
2330 3708 0.107508 CAGGACCGCATTGGATGACT 60.108 55.000 0.00 0.00 42.00 3.41
2331 3709 0.392998 ACAGGACCGCATTGGATGAC 60.393 55.000 0.00 0.00 42.00 3.06
2332 3710 1.199615 TACAGGACCGCATTGGATGA 58.800 50.000 0.00 0.00 42.00 2.92
2333 3711 2.146342 GATACAGGACCGCATTGGATG 58.854 52.381 0.00 0.00 42.00 3.51
2334 3712 1.270305 CGATACAGGACCGCATTGGAT 60.270 52.381 0.00 0.00 42.00 3.41
2335 3713 0.104120 CGATACAGGACCGCATTGGA 59.896 55.000 0.00 0.00 42.00 3.53
2336 3714 0.880278 CCGATACAGGACCGCATTGG 60.880 60.000 0.00 0.00 46.41 3.16
2337 3715 0.179084 ACCGATACAGGACCGCATTG 60.179 55.000 0.00 0.00 34.73 2.82
2338 3716 0.104304 GACCGATACAGGACCGCATT 59.896 55.000 0.00 0.00 34.73 3.56
2339 3717 1.740285 GACCGATACAGGACCGCAT 59.260 57.895 0.00 0.00 34.73 4.73
2340 3718 2.420568 GGACCGATACAGGACCGCA 61.421 63.158 0.00 0.00 36.47 5.69
2341 3719 2.416260 GGACCGATACAGGACCGC 59.584 66.667 0.00 0.00 36.47 5.68
2343 3721 1.436336 CACGGACCGATACAGGACC 59.564 63.158 23.38 0.00 41.64 4.46
2344 3722 1.436336 CCACGGACCGATACAGGAC 59.564 63.158 23.38 0.00 34.73 3.85
2345 3723 2.420568 GCCACGGACCGATACAGGA 61.421 63.158 23.38 0.00 34.73 3.86
2346 3724 2.106332 GCCACGGACCGATACAGG 59.894 66.667 23.38 14.31 37.30 4.00
2347 3725 1.518572 GTGCCACGGACCGATACAG 60.519 63.158 23.38 4.99 0.00 2.74
2348 3726 2.220615 CTGTGCCACGGACCGATACA 62.221 60.000 23.38 16.96 0.00 2.29
2349 3727 1.518572 CTGTGCCACGGACCGATAC 60.519 63.158 23.38 13.38 0.00 2.24
2350 3728 1.940883 GACTGTGCCACGGACCGATA 61.941 60.000 23.38 0.10 0.00 2.92
2351 3729 3.296709 GACTGTGCCACGGACCGAT 62.297 63.158 23.38 1.43 0.00 4.18
2352 3730 3.986006 GACTGTGCCACGGACCGA 61.986 66.667 23.38 0.00 0.00 4.69
2353 3731 4.293648 TGACTGTGCCACGGACCG 62.294 66.667 13.61 13.61 0.00 4.79
2354 3732 2.357517 CTGACTGTGCCACGGACC 60.358 66.667 11.39 2.37 0.00 4.46
2355 3733 2.172483 ATCCTGACTGTGCCACGGAC 62.172 60.000 11.39 4.75 0.00 4.79
2356 3734 1.913262 ATCCTGACTGTGCCACGGA 60.913 57.895 11.39 0.18 0.00 4.69
2357 3735 1.742880 CATCCTGACTGTGCCACGG 60.743 63.158 1.10 1.10 0.00 4.94
2358 3736 2.393768 GCATCCTGACTGTGCCACG 61.394 63.158 0.00 0.00 32.88 4.94
2359 3737 2.393768 CGCATCCTGACTGTGCCAC 61.394 63.158 0.00 0.00 35.51 5.01
2360 3738 2.046988 CGCATCCTGACTGTGCCA 60.047 61.111 0.00 0.00 35.51 4.92
2361 3739 1.237285 AAACGCATCCTGACTGTGCC 61.237 55.000 0.00 0.00 35.51 5.01
2362 3740 0.593128 AAAACGCATCCTGACTGTGC 59.407 50.000 0.00 0.00 35.59 4.57
2363 3741 2.146342 AGAAAACGCATCCTGACTGTG 58.854 47.619 0.00 0.00 0.00 3.66
2364 3742 2.417719 GAGAAAACGCATCCTGACTGT 58.582 47.619 0.00 0.00 0.00 3.55
2365 3743 1.734465 GGAGAAAACGCATCCTGACTG 59.266 52.381 0.00 0.00 0.00 3.51
2366 3744 1.673033 CGGAGAAAACGCATCCTGACT 60.673 52.381 0.00 0.00 0.00 3.41
2367 3745 0.721718 CGGAGAAAACGCATCCTGAC 59.278 55.000 0.00 0.00 0.00 3.51
2368 3746 0.391130 CCGGAGAAAACGCATCCTGA 60.391 55.000 0.00 0.00 0.00 3.86
2369 3747 1.982073 GCCGGAGAAAACGCATCCTG 61.982 60.000 5.05 0.00 0.00 3.86
2370 3748 1.745489 GCCGGAGAAAACGCATCCT 60.745 57.895 5.05 0.00 0.00 3.24
2371 3749 1.582610 TTGCCGGAGAAAACGCATCC 61.583 55.000 5.05 0.00 0.00 3.51
2372 3750 0.239879 TTTGCCGGAGAAAACGCATC 59.760 50.000 5.05 0.00 0.00 3.91
2373 3751 0.039527 GTTTGCCGGAGAAAACGCAT 60.040 50.000 5.05 0.00 0.00 4.73
2374 3752 1.357334 GTTTGCCGGAGAAAACGCA 59.643 52.632 5.05 0.00 0.00 5.24
2375 3753 1.371267 GGTTTGCCGGAGAAAACGC 60.371 57.895 5.05 3.45 35.63 4.84
2376 3754 4.935630 GGTTTGCCGGAGAAAACG 57.064 55.556 5.05 0.00 35.63 3.60
2386 3764 2.034053 TCACATTTGTCTTCGGTTTGCC 59.966 45.455 0.00 0.00 0.00 4.52
2387 3765 3.300009 CTCACATTTGTCTTCGGTTTGC 58.700 45.455 0.00 0.00 0.00 3.68
2388 3766 3.304659 CCCTCACATTTGTCTTCGGTTTG 60.305 47.826 0.00 0.00 0.00 2.93
2389 3767 2.884639 CCCTCACATTTGTCTTCGGTTT 59.115 45.455 0.00 0.00 0.00 3.27
2390 3768 2.105821 TCCCTCACATTTGTCTTCGGTT 59.894 45.455 0.00 0.00 0.00 4.44
2391 3769 1.697432 TCCCTCACATTTGTCTTCGGT 59.303 47.619 0.00 0.00 0.00 4.69
2392 3770 2.350522 CTCCCTCACATTTGTCTTCGG 58.649 52.381 0.00 0.00 0.00 4.30
2393 3771 2.289694 ACCTCCCTCACATTTGTCTTCG 60.290 50.000 0.00 0.00 0.00 3.79
2394 3772 3.425162 ACCTCCCTCACATTTGTCTTC 57.575 47.619 0.00 0.00 0.00 2.87
2395 3773 3.884037 AACCTCCCTCACATTTGTCTT 57.116 42.857 0.00 0.00 0.00 3.01
2396 3774 3.490348 CAAACCTCCCTCACATTTGTCT 58.510 45.455 0.00 0.00 0.00 3.41
2397 3775 2.029918 GCAAACCTCCCTCACATTTGTC 60.030 50.000 0.00 0.00 33.70 3.18
2398 3776 1.963515 GCAAACCTCCCTCACATTTGT 59.036 47.619 0.00 0.00 33.70 2.83
2399 3777 1.068333 CGCAAACCTCCCTCACATTTG 60.068 52.381 0.00 0.00 34.17 2.32
2400 3778 1.247567 CGCAAACCTCCCTCACATTT 58.752 50.000 0.00 0.00 0.00 2.32
2401 3779 0.609131 CCGCAAACCTCCCTCACATT 60.609 55.000 0.00 0.00 0.00 2.71
2402 3780 1.002134 CCGCAAACCTCCCTCACAT 60.002 57.895 0.00 0.00 0.00 3.21
2403 3781 2.429930 CCGCAAACCTCCCTCACA 59.570 61.111 0.00 0.00 0.00 3.58
2404 3782 2.359975 CCCGCAAACCTCCCTCAC 60.360 66.667 0.00 0.00 0.00 3.51
2405 3783 2.528127 TCCCGCAAACCTCCCTCA 60.528 61.111 0.00 0.00 0.00 3.86
2406 3784 2.269241 CTCCCGCAAACCTCCCTC 59.731 66.667 0.00 0.00 0.00 4.30
2407 3785 2.529389 ACTCCCGCAAACCTCCCT 60.529 61.111 0.00 0.00 0.00 4.20
2408 3786 2.046217 GACTCCCGCAAACCTCCC 60.046 66.667 0.00 0.00 0.00 4.30
2409 3787 2.046217 GGACTCCCGCAAACCTCC 60.046 66.667 0.00 0.00 0.00 4.30
2420 3798 3.804638 TAGGATCGGCCCGGACTCC 62.805 68.421 0.73 7.77 37.37 3.85
2421 3799 1.807495 CTTAGGATCGGCCCGGACTC 61.807 65.000 0.73 0.00 37.37 3.36
2422 3800 1.833049 CTTAGGATCGGCCCGGACT 60.833 63.158 0.73 1.50 37.37 3.85
2423 3801 2.735237 CTTAGGATCGGCCCGGAC 59.265 66.667 0.73 0.00 37.37 4.79
2424 3802 3.231736 GCTTAGGATCGGCCCGGA 61.232 66.667 0.73 0.00 37.37 5.14
2425 3803 4.315941 GGCTTAGGATCGGCCCGG 62.316 72.222 1.90 0.00 39.96 5.73
2428 3806 4.990553 GCGGGCTTAGGATCGGCC 62.991 72.222 0.00 0.00 44.59 6.13
2429 3807 3.462199 AAGCGGGCTTAGGATCGGC 62.462 63.158 3.68 0.00 34.05 5.54
2430 3808 1.301009 GAAGCGGGCTTAGGATCGG 60.301 63.158 5.80 0.00 36.26 4.18
2431 3809 0.598680 CAGAAGCGGGCTTAGGATCG 60.599 60.000 5.80 0.00 36.26 3.69
2432 3810 0.753262 TCAGAAGCGGGCTTAGGATC 59.247 55.000 5.80 0.00 36.26 3.36
2433 3811 0.466124 GTCAGAAGCGGGCTTAGGAT 59.534 55.000 5.80 0.00 36.26 3.24
2434 3812 1.614241 GGTCAGAAGCGGGCTTAGGA 61.614 60.000 5.80 4.31 36.26 2.94
2435 3813 1.153349 GGTCAGAAGCGGGCTTAGG 60.153 63.158 5.80 1.90 36.26 2.69
2436 3814 1.519455 CGGTCAGAAGCGGGCTTAG 60.519 63.158 5.80 2.65 42.53 2.18
2437 3815 2.577059 CGGTCAGAAGCGGGCTTA 59.423 61.111 5.80 0.00 42.53 3.09
2444 3822 2.435059 GTCAGGGCGGTCAGAAGC 60.435 66.667 0.00 0.00 0.00 3.86
2445 3823 2.266055 GGTCAGGGCGGTCAGAAG 59.734 66.667 0.00 0.00 0.00 2.85
2446 3824 3.319198 GGGTCAGGGCGGTCAGAA 61.319 66.667 0.00 0.00 0.00 3.02
2447 3825 4.631740 TGGGTCAGGGCGGTCAGA 62.632 66.667 0.00 0.00 0.00 3.27
2448 3826 4.394712 GTGGGTCAGGGCGGTCAG 62.395 72.222 0.00 0.00 0.00 3.51
2452 3830 3.801068 TTTTGGTGGGTCAGGGCGG 62.801 63.158 0.00 0.00 0.00 6.13
2453 3831 1.830408 TTTTTGGTGGGTCAGGGCG 60.830 57.895 0.00 0.00 0.00 6.13
2454 3832 1.745890 GTTTTTGGTGGGTCAGGGC 59.254 57.895 0.00 0.00 0.00 5.19
2455 3833 1.118965 GGGTTTTTGGTGGGTCAGGG 61.119 60.000 0.00 0.00 0.00 4.45
2456 3834 1.118965 GGGGTTTTTGGTGGGTCAGG 61.119 60.000 0.00 0.00 0.00 3.86
2457 3835 0.105709 AGGGGTTTTTGGTGGGTCAG 60.106 55.000 0.00 0.00 0.00 3.51
2458 3836 0.105913 GAGGGGTTTTTGGTGGGTCA 60.106 55.000 0.00 0.00 0.00 4.02
2459 3837 0.830444 GGAGGGGTTTTTGGTGGGTC 60.830 60.000 0.00 0.00 0.00 4.46
2460 3838 1.234820 GGAGGGGTTTTTGGTGGGT 59.765 57.895 0.00 0.00 0.00 4.51
2461 3839 1.535444 GGGAGGGGTTTTTGGTGGG 60.535 63.158 0.00 0.00 0.00 4.61
2462 3840 0.541998 GAGGGAGGGGTTTTTGGTGG 60.542 60.000 0.00 0.00 0.00 4.61
2463 3841 0.541998 GGAGGGAGGGGTTTTTGGTG 60.542 60.000 0.00 0.00 0.00 4.17
2464 3842 0.704813 AGGAGGGAGGGGTTTTTGGT 60.705 55.000 0.00 0.00 0.00 3.67
2465 3843 0.039764 GAGGAGGGAGGGGTTTTTGG 59.960 60.000 0.00 0.00 0.00 3.28
2466 3844 0.039764 GGAGGAGGGAGGGGTTTTTG 59.960 60.000 0.00 0.00 0.00 2.44
2467 3845 1.147190 GGGAGGAGGGAGGGGTTTTT 61.147 60.000 0.00 0.00 0.00 1.94
2468 3846 1.544151 GGGAGGAGGGAGGGGTTTT 60.544 63.158 0.00 0.00 0.00 2.43
2469 3847 2.127528 GGGAGGAGGGAGGGGTTT 59.872 66.667 0.00 0.00 0.00 3.27
2470 3848 4.416601 CGGGAGGAGGGAGGGGTT 62.417 72.222 0.00 0.00 0.00 4.11
2479 3857 3.488090 GAAAACGCGCGGGAGGAG 61.488 66.667 35.22 4.42 0.00 3.69
2517 3895 3.204827 ATGAATGCGGGCGCTGAC 61.205 61.111 7.64 0.00 42.51 3.51
2518 3896 3.204119 CATGAATGCGGGCGCTGA 61.204 61.111 7.64 0.00 42.51 4.26
2519 3897 3.459378 GACATGAATGCGGGCGCTG 62.459 63.158 7.64 0.67 42.51 5.18
2520 3898 3.204827 GACATGAATGCGGGCGCT 61.205 61.111 7.64 0.00 42.51 5.92
2521 3899 3.204827 AGACATGAATGCGGGCGC 61.205 61.111 0.00 0.00 42.35 6.53
2522 3900 2.711311 CAGACATGAATGCGGGCG 59.289 61.111 0.00 0.00 0.00 6.13
2523 3901 3.113745 CCAGACATGAATGCGGGC 58.886 61.111 0.00 0.00 0.00 6.13
2524 3902 2.484062 GGCCAGACATGAATGCGGG 61.484 63.158 0.00 0.00 0.00 6.13
2525 3903 1.721664 CTGGCCAGACATGAATGCGG 61.722 60.000 29.88 0.00 0.00 5.69
2526 3904 0.745486 TCTGGCCAGACATGAATGCG 60.745 55.000 32.00 2.15 31.41 4.73
2527 3905 1.022735 CTCTGGCCAGACATGAATGC 58.977 55.000 32.00 0.00 33.22 3.56
2528 3906 1.022735 GCTCTGGCCAGACATGAATG 58.977 55.000 32.00 20.26 33.22 2.67
2529 3907 0.622136 TGCTCTGGCCAGACATGAAT 59.378 50.000 32.00 0.00 37.74 2.57
2530 3908 0.035725 CTGCTCTGGCCAGACATGAA 60.036 55.000 32.00 15.97 37.74 2.57
2531 3909 0.906282 TCTGCTCTGGCCAGACATGA 60.906 55.000 32.00 23.52 37.74 3.07
2532 3910 0.743701 GTCTGCTCTGGCCAGACATG 60.744 60.000 32.00 22.48 41.56 3.21
2533 3911 1.601171 GTCTGCTCTGGCCAGACAT 59.399 57.895 32.00 0.00 41.56 3.06
2534 3912 2.935740 CGTCTGCTCTGGCCAGACA 61.936 63.158 32.00 28.46 41.78 3.41
2535 3913 2.125753 CGTCTGCTCTGGCCAGAC 60.126 66.667 32.00 25.76 40.13 3.51
2536 3914 4.074526 GCGTCTGCTCTGGCCAGA 62.075 66.667 33.04 33.04 38.39 3.86
2539 3917 4.521062 ATCGCGTCTGCTCTGGCC 62.521 66.667 5.77 0.00 39.65 5.36
2540 3918 2.959071 GATCGCGTCTGCTCTGGC 60.959 66.667 5.77 0.00 39.65 4.85
2541 3919 2.653448 CGATCGCGTCTGCTCTGG 60.653 66.667 5.77 0.00 39.65 3.86
2542 3920 3.318555 GCGATCGCGTCTGCTCTG 61.319 66.667 26.12 0.00 40.36 3.35
2544 3922 3.741435 TGAGCGATCGCGTCTGCTC 62.741 63.158 32.35 28.79 45.37 4.26
2563 3941 4.183686 CTTCAATGCCGGCGCCAG 62.184 66.667 28.98 17.96 0.00 4.85
2609 3987 4.704833 TGCAGAGGGAAGTGGCGC 62.705 66.667 0.00 0.00 0.00 6.53
2610 3988 2.435586 CTGCAGAGGGAAGTGGCG 60.436 66.667 8.42 0.00 0.00 5.69
2611 3989 2.045536 CCTGCAGAGGGAAGTGGC 60.046 66.667 17.39 0.00 35.40 5.01
2612 3990 2.045536 GCCTGCAGAGGGAAGTGG 60.046 66.667 17.39 0.00 40.19 4.00
2613 3991 2.435586 CGCCTGCAGAGGGAAGTG 60.436 66.667 17.39 0.00 40.19 3.16
2614 3992 2.604686 TCGCCTGCAGAGGGAAGT 60.605 61.111 17.39 0.00 40.19 3.01
2615 3993 2.125350 GTCGCCTGCAGAGGGAAG 60.125 66.667 17.39 0.00 40.19 3.46
2616 3994 2.604686 AGTCGCCTGCAGAGGGAA 60.605 61.111 17.39 1.92 40.19 3.97
2617 3995 3.385384 CAGTCGCCTGCAGAGGGA 61.385 66.667 17.39 15.84 40.19 4.20
2618 3996 3.655810 GACAGTCGCCTGCAGAGGG 62.656 68.421 17.39 13.70 42.81 4.30
2619 3997 2.125753 GACAGTCGCCTGCAGAGG 60.126 66.667 17.39 6.45 42.81 3.69
2620 3998 2.505777 CGACAGTCGCCTGCAGAG 60.506 66.667 17.39 9.17 42.81 3.35
2629 4007 0.381428 GTTTGAACGTGCGACAGTCG 60.381 55.000 19.10 19.10 43.89 4.18
2630 4008 0.381428 CGTTTGAACGTGCGACAGTC 60.381 55.000 8.04 0.00 46.63 3.51
2631 4009 1.634225 CGTTTGAACGTGCGACAGT 59.366 52.632 8.04 0.00 46.63 3.55
2632 4010 4.471814 CGTTTGAACGTGCGACAG 57.528 55.556 8.04 0.00 46.63 3.51
2641 4019 0.590481 GGCCGTTGTGTCGTTTGAAC 60.590 55.000 0.00 0.00 0.00 3.18
2642 4020 1.722677 GGCCGTTGTGTCGTTTGAA 59.277 52.632 0.00 0.00 0.00 2.69
2643 4021 2.526993 CGGCCGTTGTGTCGTTTGA 61.527 57.895 19.50 0.00 0.00 2.69
2644 4022 2.052590 CGGCCGTTGTGTCGTTTG 60.053 61.111 19.50 0.00 0.00 2.93
2645 4023 3.944233 GCGGCCGTTGTGTCGTTT 61.944 61.111 28.70 0.00 0.00 3.60
2666 4044 4.436998 GGGTGGCAGACGGACGAG 62.437 72.222 0.00 0.00 0.00 4.18
2678 4056 2.755064 TGCCATCAATGCGGGTGG 60.755 61.111 0.00 0.00 34.84 4.61
2679 4057 2.491152 GTGCCATCAATGCGGGTG 59.509 61.111 0.00 0.00 0.00 4.61
2680 4058 3.133464 CGTGCCATCAATGCGGGT 61.133 61.111 0.00 0.00 0.00 5.28
2681 4059 4.557605 GCGTGCCATCAATGCGGG 62.558 66.667 0.00 0.00 0.00 6.13
2682 4060 4.892379 CGCGTGCCATCAATGCGG 62.892 66.667 0.00 0.00 42.21 5.69
2683 4061 4.892379 CCGCGTGCCATCAATGCG 62.892 66.667 4.92 3.16 44.15 4.73
2684 4062 3.340953 AACCGCGTGCCATCAATGC 62.341 57.895 4.92 0.00 0.00 3.56
2685 4063 1.514657 CAACCGCGTGCCATCAATG 60.515 57.895 4.92 0.00 0.00 2.82
2686 4064 2.876955 CAACCGCGTGCCATCAAT 59.123 55.556 4.92 0.00 0.00 2.57
2687 4065 4.036804 GCAACCGCGTGCCATCAA 62.037 61.111 10.36 0.00 38.66 2.57
2700 4078 4.070552 AGGAGACGCCTCGGCAAC 62.071 66.667 8.87 1.22 46.97 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.